ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet20b04 |
|---|---|
| Clone Library Name | barley_pub |
>TAR1_KLULA (Q6CQE5) Protein TAR1| Length = 109 Score = 72.0 bits (175), Expect = 7e-13 Identities = 37/70 (52%), Positives = 42/70 (60%) Frame = -2 Query: 338 FSSFPRGTCSLSVSRLYLALDGVYRPIWAAFPNNPTR*PRLVGRQGPGRTGLSPSQAPLS 159 FSSF TCSLSVSR YLALDG+Y P+ AAFPNN TR P TG SPS S Sbjct: 23 FSSFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTRRKHFTNNWDPRHTGFSPSMTSCS 82 Query: 158 RGLGPGPSLR 129 + GP+ + Sbjct: 83 KEHRQGPATK 92
>TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA| protein 1) Length = 124 Score = 66.2 bits (160), Expect = 4e-11 Identities = 34/61 (55%), Positives = 38/61 (62%) Frame = -2 Query: 338 FSSFPRGTCSLSVSRLYLALDGVYRPIWAAFPNNPTR*PRLVGRQGPGRTGLSPSQAPLS 159 FSSF TCSLSVSR YLALDG+Y P+ AAFPNN T + P TG SPS S Sbjct: 38 FSSFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTLRRHFTKNRTPRHTGFSPSMTSCS 97 Query: 158 R 156 + Sbjct: 98 K 98
>PKHA4_RAT (P60669) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 34.7 bits (78), Expect = 0.12 Identities = 30/79 (37%), Positives = 35/79 (44%), Gaps = 9/79 (11%) Frame = -2 Query: 224 PRLVGRQGPGRTGLSPSQAPLSRGLG------PGPSLRTRLQTTIRTAQPPDSQAGLFPV 63 P V R+ GRT SP APLSRG G PG S + T R + P+ + L Sbjct: 180 PPEVNRREEGRTSESPEVAPLSRGPGRHEMHAPGSSADLQPDTWSRRTRSPEPFSPLSRP 239 Query: 62 RSPL---LGESL*VSSPPL 15 SPL S V PPL Sbjct: 240 PSPLSLPRPRSAPVRRPPL 258
>ARX_HUMAN (Q96QS3) Homeobox protein ARX (Aristaless-related homeobox)| Length = 562 Score = 34.3 bits (77), Expect = 0.16 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -3 Query: 223 RASWGDRVRAGRGSHPPRRPFPGDL 149 RA W R +AG +HPP PFPG L Sbjct: 380 RAKWRKREKAGAQTHPPGLPFPGPL 404
>ARX_MOUSE (O35085) Homeobox protein ARX (Aristaless-related homeobox)| Length = 564 Score = 34.3 bits (77), Expect = 0.16 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -3 Query: 223 RASWGDRVRAGRGSHPPRRPFPGDL 149 RA W R +AG +HPP PFPG L Sbjct: 382 RAKWRKREKAGAQTHPPGLPFPGPL 406
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 33.9 bits (76), Expect = 0.21 Identities = 27/85 (31%), Positives = 30/85 (35%) Frame = +2 Query: 56 ASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES 235 A EPG P G A DR + GAPG P P P P G + Sbjct: 1003 AGEPGREGSPGADGPPGR--DGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDR 1060 Query: 236 GCLGMQPKSGGRLRPRLNTGERPIA 310 G G Q G + P G R IA Sbjct: 1061 GEAGAQ----GPMGPSGPAGARGIA 1081 Score = 30.4 bits (67), Expect = 2.3 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 246 PKQPDSLTAPRGATGS-GPDGALTLPGA 166 P+ P +T P+GA G+ GP GA PGA Sbjct: 846 PQGPTGVTGPKGARGAQGPPGATGFPGA 873 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 164 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 265 GAPG AP P P P G +G LG + ++G Sbjct: 395 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAG 428
>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)| Length = 299 Score = 33.9 bits (76), Expect = 0.21 Identities = 27/89 (30%), Positives = 35/89 (39%) Frame = +2 Query: 53 TASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNE 232 T EPG ++ +P E G A + G PG +P P P P G + Sbjct: 200 TPGEPGVPA-QSEPLIPGE--PGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDGQ 256 Query: 233 SGCLGMQPKSGGRLRPRLNTGERPIANKY 319 G G P + G P + GER I KY Sbjct: 257 PGADG-NPGAPGPAGPPGSPGERGICPKY 284
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 33.9 bits (76), Expect = 0.21 Identities = 27/85 (31%), Positives = 30/85 (35%) Frame = +2 Query: 56 ASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES 235 A EPG P G A DR + GAPG P P P P G + Sbjct: 963 AGEPGREGSPGADGPPGR--DGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDR 1020 Query: 236 GCLGMQPKSGGRLRPRLNTGERPIA 310 G G Q G + P G R IA Sbjct: 1021 GEAGAQ----GPMGPSGPAGARGIA 1041 Score = 30.4 bits (67), Expect = 2.3 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 246 PKQPDSLTAPRGATGS-GPDGALTLPGA 166 P+ P +T P+GA G+ GP GA PGA Sbjct: 806 PQGPTGVTGPKGARGAQGPPGATGFPGA 833 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 164 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 265 GAPG AP P P P G +G LG + ++G Sbjct: 355 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTG 388
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 33.1 bits (74), Expect = 0.36 Identities = 23/71 (32%), Positives = 27/71 (38%) Frame = +2 Query: 53 TASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNE 232 TA EPG +P G + DR + GAPG P P PV P G + Sbjct: 850 TAGEPGRDGNPGSDGLPGR--DGAPGAKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGD 907 Query: 233 SGCLGMQPKSG 265 G G SG Sbjct: 908 RGETGPAGPSG 918 Score = 29.3 bits (64), Expect = 5.2 Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 17/64 (26%) Frame = +2 Query: 161 KGAPGRVRAP------------SGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLN 289 +G PG AP P P PRG V SG G SG G PR N Sbjct: 953 RGFPGNPGAPGSPGPAGHQGAVGSPGPAGPRGPVGPSGPPGKDGASGHPGPIGPPGPRGN 1012 Query: 290 TGER 301 GER Sbjct: 1013 RGER 1016 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 Query: 161 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 271 +G PG P GP P +G SG G K G R Sbjct: 569 QGMPGERGGPGGPGPKGDKGEPGSSGVDGAPGKDGPR 605
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 32.7 bits (73), Expect = 0.47 Identities = 28/94 (29%), Positives = 32/94 (34%), Gaps = 2/94 (2%) Frame = +2 Query: 44 PLVTASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGA 223 P A PG A A+ L G D G PG P P P+GA Sbjct: 188 PAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGA 247 Query: 224 VNESGCLGMQPKSG--GRLRPRLNTGERPIANKY 319 G G +SG G P GE+ I KY Sbjct: 248 PGPDGPPGADGQSGPPGPPGPAGTPGEKGICPKY 281 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/49 (30%), Positives = 19/49 (38%) Frame = +2 Query: 119 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 265 G + D + G PG AP P P P G E+G G + G Sbjct: 154 GPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPG 202
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 32.7 bits (73), Expect = 0.47 Identities = 22/70 (31%), Positives = 24/70 (34%) Frame = +2 Query: 56 ASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES 235 A EPG P G A DR + GAPG P P P P G + Sbjct: 962 AGEPGREGSPGADGPPGR--DGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDR 1019 Query: 236 GCLGMQPKSG 265 G G Q G Sbjct: 1020 GEAGAQGPMG 1029 Score = 30.4 bits (67), Expect = 2.3 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 246 PKQPDSLTAPRGATGS-GPDGALTLPGA 166 P+ P +T P+GA G+ GP GA PGA Sbjct: 805 PQGPTGVTGPKGARGAQGPPGATGFPGA 832
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 32.7 bits (73), Expect = 0.47 Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 1/75 (1%) Frame = +1 Query: 148 PSPLERGAWEGESPVR-PGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYRRETDSEQVPR 324 P PL RGA SP R P TR +RV + TPS RR + S Sbjct: 690 PPPLRRGA--SASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASG 747 Query: 325 GKDEKDSHHQRPPAP 369 + HQ PP+P Sbjct: 748 SPEPAPKKHQGPPSP 762
>CAC1A_RAT (P54282) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 4) (Brain calcium channel I) (BI) (RAT brain class A) (RBA-I) Length = 2212 Score = 32.3 bits (72), Expect = 0.62 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = -2 Query: 197 GRTGLSPSQAPLSRGLGPGPSLRTRLQTTI--RTAQPPDSQAGLFPVRSPLLGESL*VSS 24 G +GL PS A + PGP+L T Q RT P + + P ++P SL V++ Sbjct: 1044 GHSGLPPSPAKIGNSTNPGPALATNPQNAASRRTPNNPGNPSNPGPPKTP--ENSLIVTN 1101 Query: 23 P 21 P Sbjct: 1102 P 1102
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 32.3 bits (72), Expect = 0.62 Identities = 23/71 (32%), Positives = 25/71 (35%) Frame = +2 Query: 53 TASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNE 232 TA EPG P G DR + GAPG P P PV P G + Sbjct: 1005 TAGEPGRDGNPGSDGQPGR--DGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKSGD 1062 Query: 233 SGCLGMQPKSG 265 G G SG Sbjct: 1063 RGETGPAGPSG 1073 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Frame = +2 Query: 164 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGER 301 GA G A P P PRG V G G SG G PR N GER Sbjct: 1121 GAAGHQGAIGSPGPAGPRGPVGPHGPPGKDGTSGHPGPIGPPGPRGNRGER 1171 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/52 (32%), Positives = 20/52 (38%) Frame = +2 Query: 116 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 271 SG + + GAPG A P P PRG E+G G G R Sbjct: 1057 SGKSGDRGETGPAGPSGAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHR 1108
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 32.0 bits (71), Expect = 0.80 Identities = 22/71 (30%), Positives = 26/71 (36%) Frame = +2 Query: 53 TASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNE 232 TA EPG +P G DR + GAPG P P PV P G + Sbjct: 1006 TAGEPGRDGNPGSDGLPGR--DGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGD 1063 Query: 233 SGCLGMQPKSG 265 G G +G Sbjct: 1064 RGESGPAGPAG 1074 Score = 30.4 bits (67), Expect = 2.3 Identities = 34/106 (32%), Positives = 37/106 (34%), Gaps = 20/106 (18%) Frame = +2 Query: 44 PLVTASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGA---PGRVRAP-------- 190 P A PG A +R A + GD +R KG PG AP Sbjct: 1069 PAGPAGAPGPAG--SRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQ 1126 Query: 191 ----SGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGER 301 P P PRG V SG G SG G PR N GER Sbjct: 1127 QGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGER 1172
>CAC1A_MOUSE (P97445) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2164 Score = 32.0 bits (71), Expect = 0.80 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -2 Query: 197 GRTGLSPSQAPLSRGLGPGPSLRTRLQTTI--RTAQPPDSQAGLFPVRSPLLGESL*VSS 24 G +GL PS A + PGP+L T Q RT P + P ++P SL V++ Sbjct: 996 GHSGLPPSPAKIGNSTNPGPALATNPQNAASRRTPNNPGDPSNPGPPKTP--ENSLIVTN 1053 Query: 23 P 21 P Sbjct: 1054 P 1054
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 32.0 bits (71), Expect = 0.80 Identities = 23/71 (32%), Positives = 25/71 (35%) Frame = +2 Query: 53 TASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNE 232 TA EPG P G DR + GAPG P P PV P G + Sbjct: 1005 TAGEPGRDGNPGSDGQPGR--DGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKNGD 1062 Query: 233 SGCLGMQPKSG 265 G G SG Sbjct: 1063 RGETGPAGPSG 1073 Score = 31.6 bits (70), Expect = 1.0 Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Frame = +2 Query: 164 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGER 301 GA G A P P PRG V G G SG G PR N GER Sbjct: 1121 GAAGHQGAVGSPGPAGPRGPVGPHGPPGKDGSSGHPGPIGPPGPRGNRGER 1171
>PCTK1_HUMAN (Q00536) Serine/threonine-protein kinase PCTAIRE-1 (EC 2.7.11.22)| (PCTAIRE-motif protein kinase 1) Length = 496 Score = 32.0 bits (71), Expect = 0.80 Identities = 24/91 (26%), Positives = 42/91 (46%) Frame = +2 Query: 137 TDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANK 316 +D + P + APG +R+ GP AP V+E +G +S + + P+ + Sbjct: 42 SDPGEAPTRAAPGELRSARGPLSSAPE-IVHEDLKMGSDGESDQASATSSDEVQSPVRVR 100 Query: 317 YREGKMKRTLTTNDHQRLLLSLPASAHSKQG 409 R ++ T + ++R LSLPA +G Sbjct: 101 MRNHPPRKISTEDINKR--LSLPADIRLPEG 129
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 32.0 bits (71), Expect = 0.80 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = +2 Query: 119 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLG 247 G + DR + GAPG AP P PV P G + G G Sbjct: 590 GSPGAKGDRGETGPAGAPGPPGAPGAPGPVGPAGKSGDRGETG 632 Score = 28.9 bits (63), Expect = 6.8 Identities = 21/70 (30%), Positives = 26/70 (37%) Frame = +2 Query: 56 ASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES 235 A PG A VP +L + S A +G PG P P PRGA Sbjct: 214 AGPPGEAGKPGEQGVPGDLGAPGPSGARGE-----RGFPGERGVEGPPGPAGPRGANGAP 268 Query: 236 GCLGMQPKSG 265 G G + +G Sbjct: 269 GNDGAKGDAG 278
>COLQ_TORMA (Q03637) Acetylcholinesterase collagenic tail peptide precursor| (AChE Q subunit) Length = 471 Score = 31.6 bits (70), Expect = 1.0 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%) Frame = +2 Query: 161 KGAPGRVRAPSG-------PDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 301 KG PG VR P G P P+ PRG + G G+ P + G + P+ TG++ Sbjct: 150 KGRPG-VRGPRGMPGSPCSPGPIGPRGEKGDIGLTGL-PGARGPMGPKGLTGQK 201
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 31.6 bits (70), Expect = 1.0 Identities = 20/61 (32%), Positives = 23/61 (37%) Frame = +2 Query: 65 PGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCL 244 PG A +P G A A DR + G+PG P GP P G E G Sbjct: 604 PGPAGKNGDVGLPGP--PGPAGPAGDRGEPGPSGSPGLQGLPGGPGPAGENGKPGEPGPK 661 Query: 245 G 247 G Sbjct: 662 G 662
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 31.6 bits (70), Expect = 1.0 Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 3/90 (3%) Frame = +2 Query: 44 PLVTASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGA 223 P+ PG P E G+ SA G+PG P P P P GA Sbjct: 469 PIGPQGLPGLKGEPGLPGPPGEGKVGEPGSAGPTGPPGVPGSPGLTGPPGPPGPPGPPGA 528 Query: 224 ---VNESGCLGMQPKSGGRLRPRLNTGERP 304 ++E+G G+ +GG L G +P Sbjct: 529 PGALDETGIAGLHLPNGGVEGAVLGKGGKP 558
>CO9A2_HUMAN (Q14055) Collagen alpha-2(IX) chain precursor| Length = 689 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/72 (26%), Positives = 29/72 (40%) Frame = +2 Query: 56 ASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES 235 A +PG+ + A VP + G D+ + +G PG P PRG + Sbjct: 324 AGQPGSPGHQGLAGVPGQ--PGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQ 381 Query: 236 GCLGMQPKSGGR 271 G +G + G R Sbjct: 382 GIMGQKGDQGER 393 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 Query: 164 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRL 274 GAPG P P PV G + CLG + RL Sbjct: 644 GAPGEAGRPGLPGPVGLPGFCEPAACLGASAYASARL 680
>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2| Length = 984 Score = 31.2 bits (69), Expect = 1.4 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 7/114 (6%) Frame = +2 Query: 20 EEKKLTRIPLVTASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGP 199 EE ++ +++ +P Q + AA A + +RA+ P +G P+GP Sbjct: 243 EETAGPQVRVISRPDPAAVQAQAAAA---------AQAREERAERPDRGPRPAGARPAGP 293 Query: 200 DPVAPRGAVNESGCLGMQPKSG----GRLRPRLNTGERPIA---NKYREGKMKR 340 P PR + G P+SG G RP G+ A + + +G+ K+ Sbjct: 294 RPGGPRQGDSRPGDGRPAPRSGAPRPGGARPAAGFGQPAQAENSSPFADGQSKK 347
>EMID2_HUMAN (Q96A83) Collagen alpha-1(XXVI) chain precursor (EMI| domain-containing protein 2) (Emu2 protein) (Emilin and multimerin domain-containing protein 2) Length = 441 Score = 31.2 bits (69), Expect = 1.4 Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 5/77 (6%) Frame = +2 Query: 56 ASEPGTAQLENRAAV-----PSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRG 220 A PG + + A+ P++ +GD+ A+ G PG P P P PRG Sbjct: 261 AGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRG 320 Query: 221 AVNESGCLGMQPKSGGR 271 G G Q +G R Sbjct: 321 PPGPPGTPGSQGLAGER 337
>C1QB_MOUSE (P14106) Complement C1q subcomponent subunit B precursor| Length = 253 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/68 (30%), Positives = 31/68 (45%) Frame = +2 Query: 62 EPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGC 241 +PGT ++ +P +GD ++ G PG+V P GP V P+G SG Sbjct: 50 QPGTPGIKGEKGLPGL--AGDLGEFGEKGDPGIPGTPGKV-GPKGP--VGPKGTPGPSGP 104 Query: 242 LGMQPKSG 265 G + SG Sbjct: 105 RGPKGDSG 112
>ELN_BOVIN (P04985) Elastin precursor (Tropoelastin)| Length = 747 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -1 Query: 330 FPSRYLFAIGLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGAL--TLPGAP 163 F +R IG P F LG P +G P + A G+G GAL +PGAP Sbjct: 408 FGARGAVGIGGIPTFGLGPGGFPGIGDAAAAPAAAAAKAAKIGAGGVGALGGVVPGAP 465
>PGCA_RAT (P07897) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2124 Score = 30.8 bits (68), Expect = 1.8 Identities = 20/77 (25%), Positives = 34/77 (44%) Frame = +2 Query: 122 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 301 ++ SA+ ++PW P R PSG + + + + +G L P SGG + +G Sbjct: 864 ESGSASGDGEIPWSSTPTVDRLPSGGESLEGSASASGTGDLSGLP-SGGEITETSASGTE 922 Query: 302 PIANKYREGKMKRTLTT 352 I+ G T T+ Sbjct: 923 EISGLPSGGDDLETSTS 939
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/49 (34%), Positives = 20/49 (40%) Frame = +2 Query: 119 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 265 G A DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAAGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065
>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) Length = 650 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 7/65 (10%) Frame = -2 Query: 245 PNNPTR*PR-LVGRQGPGRTGLSPSQAPLSRGLGPGPSLRTRLQTTIR------TAQPPD 87 P PT+ P GPG G P+ +P G GPGP+L + +R +PP Sbjct: 39 PPQPTQPPPGPAAASGPGAAG--PASSPPPAGPGPGPALPAVRLSLVRLGDPDGAGEPPS 96 Query: 86 SQAGL 72 + +GL Sbjct: 97 TPSGL 101
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 30.8 bits (68), Expect = 1.8 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +2 Query: 119 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 265 G + DR + G PG AP P PV P G + G G +G Sbjct: 1028 GSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAG 1076 Score = 28.9 bits (63), Expect = 6.8 Identities = 21/70 (30%), Positives = 26/70 (37%) Frame = +2 Query: 56 ASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES 235 A PG A VP +L + S A +G PG P P PRGA Sbjct: 649 AGPPGEAGKPGEQGVPGDLGAPGPSGARGE-----RGFPGERGVQGPPGPAGPRGANGAP 703 Query: 236 GCLGMQPKSG 265 G G + +G Sbjct: 704 GNDGAKGDAG 713
>PCTK1_MOUSE (Q04735) Serine/threonine-protein kinase PCTAIRE-1 (EC 2.7.11.22)| (PCTAIRE-motif protein kinase 1) (CRK5) Length = 496 Score = 30.8 bits (68), Expect = 1.8 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 2/116 (1%) Frame = +2 Query: 68 GTAQLENRAAVPSE--L*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGC 241 G ++ VP + L +D + P + APG +R+ GP AP V+E Sbjct: 17 GGRGIDKTNGVPEQIGLDESGGGGGSDLGEAPTRIAPGELRSVRGPLSSAPE-IVHEDMK 75 Query: 242 LGMQPKSGGRLRPRLNTGERPIANKYREGKMKRTLTTNDHQRLLLSLPASAHSKQG 409 +G +S + + P+ + R ++ T + ++R LSLPA +G Sbjct: 76 MGSDGESDQASATSSDEVQSPVRVRMRNHPPRKISTEDINKR--LSLPADIRLPEG 129
>CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)| Length = 623 Score = 30.8 bits (68), Expect = 1.8 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = -1 Query: 303 GLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAP 163 G+SP G PP L P +P + P GATG P G + PG P Sbjct: 151 GISPPGLFGERGPPGL---PGRPGPV-GPMGATGRAPKGDIPDPGPP 193
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Frame = +2 Query: 119 GDASSATDRAQVPWKGAPGRV----RAPSGPD--PVAPRGAVNESGCLGMQPKSGGRLRP 280 G++S+ + QVP V RAPS PD P PR S L +PK + +P Sbjct: 2327 GESSTKRKKGQVPGPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVLPTKPKPNSQNKP 2386 Query: 281 R 283 R Sbjct: 2387 R 2387
>CNO_HUMAN (Q9NUP1) Cappuccino protein homolog| Length = 217 Score = 30.8 bits (68), Expect = 1.8 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Frame = -1 Query: 261 DLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDYNSD---GTAA 91 D G +P+ P+GA SG G ++ + G W AED +P + AA Sbjct: 7 DGGALPEGLAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPLLRRAAA 66 Query: 90 RFSSWAVPGS 61 +++ +PG+ Sbjct: 67 GYAACLLPGA 76
>SNIP1_HUMAN (Q8TAD8) Smad nuclear-interacting protein 1| Length = 396 Score = 30.4 bits (67), Expect = 2.3 Identities = 25/81 (30%), Positives = 32/81 (39%) Frame = +1 Query: 109 IVVWRRVLSDGPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAK 288 +VV + LS P R G SP P P R G R GN A+ +P K K Sbjct: 27 VVVKQERLSPEVAPPAHRRPDHSGGSP-SPPTSEPARSGHR----GNRARGVSRSPPKKK 81 Query: 289 YRRETDSEQVPRGKDEKDSHH 351 + + PR K + HH Sbjct: 82 NKASGRRSKSPRSKRNRSPHH 102
>DPY13_CAEEL (P17657) Cuticle collagen dpy-13 (Protein dumpy-13)| Length = 302 Score = 30.4 bits (67), Expect = 2.3 Identities = 27/88 (30%), Positives = 32/88 (36%), Gaps = 3/88 (3%) Frame = +2 Query: 65 PGTAQLENRAAVPSEL*SGDASSATDRAQVPW---KGAPGRVRAPSGPDPVAPRGAVNES 235 PG E AV + G+ S + V G PG P P P P G + Sbjct: 201 PGAPGDEGLPAVCEPVQKGEPGSTGEPGPVGPPGPSGQPGNDGTPGQPGPKGPPGPDGKP 260 Query: 236 GCLGMQPKSGGRLRPRLNTGERPIANKY 319 G G P G + P GER I KY Sbjct: 261 GADG-NPGQPGPVGPPGTPGERGICPKY 287
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 30.4 bits (67), Expect = 2.3 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 3/90 (3%) Frame = +2 Query: 44 PLVTASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGA 223 P+ PG P E +G+ +A G+PG P P P P GA Sbjct: 473 PIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGA 532 Query: 224 ---VNESGCLGMQPKSGGRLRPRLNTGERP 304 +E+G G+ +GG L G +P Sbjct: 533 PGAFDETGIAGLHLPNGGVEGAVLGKGGKP 562
>HUWE1_MOUSE (Q7TMY8) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)| (E3 ubiquitin protein ligase URE-B1) (E3Histone) Length = 4377 Score = 30.4 bits (67), Expect = 2.3 Identities = 20/63 (31%), Positives = 30/63 (47%) Frame = -1 Query: 225 TAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDYNSDGTAARFSSWAVPGSLAVTR 46 TA G P + G P + ED+SP +S+ ++ R S+ A+ G A +R Sbjct: 2884 TAGSSTPGDAPSVVAEVQGRPDVSRESNQPPEDSSPPASSESSSTRDSAVAISG--ADSR 2941 Query: 45 GIL 37 GIL Sbjct: 2942 GIL 2944
>ARX_BRARE (O42115) Aristaless-related homeobox protein (ARX)| Length = 453 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -3 Query: 223 RASWGDRVRAGRGSHPPRRPFPGDL 149 RA W R +AG +HP PFPG L Sbjct: 267 RAKWRKREKAGVQAHPTGLPFPGPL 291
>RL15_STAEQ (Q5HM18) 50S ribosomal protein L15| Length = 146 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +2 Query: 161 KGAPG--RVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 307 K A G RVR G G + G G + +SGG+LRP G+ P+ Sbjct: 7 KAAEGSRRVRNRVGRGAATGNGKTSGRGQKGQKARSGGKLRPGFEGGQLPL 57
>CO9A2_MOUSE (Q07643) Collagen alpha-2(IX) chain precursor| Length = 688 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/69 (26%), Positives = 27/69 (39%) Frame = +2 Query: 65 PGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCL 244 PG+ + A VP + G D+ + +G PG P PRG + G + Sbjct: 326 PGSPGHQGLAGVPGQ--PGTKGGPGDKGEPGQQGLPGVSGPPGKEGEPGPRGEIGPQGIM 383 Query: 245 GMQPKSGGR 271 G + G R Sbjct: 384 GQKGDQGER 392 Score = 29.6 bits (65), Expect = 4.0 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 Query: 164 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRL 274 GAPG P P PV G + CLG + RL Sbjct: 643 GAPGEAGRPGRPGPVGLPGFCEPAACLGASAYTSARL 679
>CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Epidermal growth factor-like 2) (Multiple epidermal growth factor-like domains 3) (Flamingo 1) Length = 2923 Score = 30.0 bits (66), Expect = 3.1 Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 7/79 (8%) Frame = +3 Query: 69 EQPSLRIGRLCRPNCSLETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARSTSRVVWE 248 E P L+ RL +C L P R G +SP + LGG R T + S V E Sbjct: 134 EHPCLKAPRLRCQSCKLAQAPGLRAGERSPEES-LGGRRKRNVNTAPQFQPPSYQATVPE 192 Query: 249 CSPN-------RAVDSVQG 284 P RA+D +G Sbjct: 193 NQPAGTPVASLRAIDPDEG 211
>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2| Length = 953 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/51 (31%), Positives = 21/51 (41%) Frame = +2 Query: 128 SSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 280 + A R W+G + PSGP +A RG V G S G + P Sbjct: 868 AGAASREHARWQGGERGLSGPSGPGHMASRGGVAGRGGFAQGGHSQGHVVP 918
>B3A2_RABIT (P48746) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1237 Score = 30.0 bits (66), Expect = 3.1 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -1 Query: 279 GRSLPPDLGCIPK--QPDSLTAPRGATGSGPDGALTLPGAPFQG 154 GR LPP LG PK Q +L A G+ D L G PF G Sbjct: 637 GRLLPPGLGLEPKSAQDKALLQMVEAAGAAEDDPLRRTGRPFGG 680
>SSP5_STRGN (P16952) Agglutinin receptor precursor (SSP-5)| Length = 1500 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/79 (25%), Positives = 27/79 (34%) Frame = +1 Query: 136 DGPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYRRETDSEQ 315 D P PS E +E E P+ P P P+ + Q P + Y E E Sbjct: 798 DQPEPSKPEEPTYETEKPLEPAPVAPSYENEPTPPVKTPDQPEPSKPEEPNYETEKPLEP 857 Query: 316 VPRGKDEKDSHHQRPPAPP 372 P ++ P PP Sbjct: 858 APVAPS-----YENEPTPP 871
>SCND1_HUMAN (P57086) SCAN domain-containing protein 1| Length = 179 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/62 (32%), Positives = 28/62 (45%) Frame = +2 Query: 50 VTASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVN 229 + A+EP A + AAVP E G SS+ P +P P+P +P AV Sbjct: 1 MAATEPILAATGSPAAVPPEKLEGAGSSSAPERNCVGSSLP--EASPPAPEPSSPNAAVP 58 Query: 230 ES 235 E+ Sbjct: 59 EA 60
>ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc finger protein)| Length = 2025 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/65 (23%), Positives = 30/65 (46%) Frame = +2 Query: 116 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTG 295 S D+ +T++ + +P + +PS +NE C+ P S L+P + Sbjct: 803 SNDSKESTEKPEKEKSKSPEKELSPSNSSSSNKESKMNEKSCI-KSPSSTESLQPTVKQS 861 Query: 296 ERPIA 310 ++P+A Sbjct: 862 DQPVA 866
>GA2L1_MOUSE (Q8JZP9) GAS2-like protein 1 (Growth arrest-specific 2-like 1)| Length = 678 Score = 30.0 bits (66), Expect = 3.1 Identities = 26/90 (28%), Positives = 38/90 (42%) Frame = +3 Query: 99 CRPNCSLETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARSTSRVVWECSPNRAVDSV 278 CR + S PQ+RTG SP +G PRP + E RS+ V S + Sbjct: 274 CRCSSSTHRLPQQRTGTFSPQRGSPTP-SPRPGSPVPGSERRSSRPEVTPISLRGTKEGP 332 Query: 279 QG*IQARDR*RTSTARER*KGLSPPTTTSA 368 + ++ RD+ R G S + +SA Sbjct: 333 ETPLRPRDQLPPLPRSRRYSGDSDSSASSA 362
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +2 Query: 164 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 280 G PG + P P PRGA G G P + GR+ P Sbjct: 837 GPPGPIGNVGAPGPKGPRGAAGPPGATGF-PGAAGRVGP 874 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +2 Query: 119 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 265 G + DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065
>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV)] Length = 1367 Score = 29.6 bits (65), Expect = 4.0 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = +2 Query: 164 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRLRPRLNTGER 301 G+PG AP P P P G G G Q G G P + GE+ Sbjct: 632 GSPGEDGAPGEPGPQGPEGQPGLDGASGQQGMKGEKGARGPNGSAGEK 679
>CO6A2_HUMAN (P12110) Collagen alpha-2(VI) chain precursor| Length = 1019 Score = 29.6 bits (65), Expect = 4.0 Identities = 21/51 (41%), Positives = 22/51 (43%) Frame = +2 Query: 119 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 271 GDA D Q KG PGR G PRGA E G G + GGR Sbjct: 493 GDAGPRGDSGQPGPKGDPGR----PGFSYPGPRGAPGEKGEPGPRGPEGGR 539
>MYO10_BOVIN (P79114) Myosin-10 (Myosin X)| Length = 2052 Score = 29.6 bits (65), Expect = 4.0 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 11/69 (15%) Frame = -1 Query: 252 CIPKQPDSLTAPRG----ATGSGPDGALTLPGAPFQGTWARSVAEDASPD-------YNS 106 C+P+ P +L AP G DGA+T + T++ S + SPD YNS Sbjct: 1068 CLPQTPGALPAPEGDYDYDQDDYEDGAITSGSSV---TFSNSCSSQWSPDYRCSVGTYNS 1124 Query: 105 DGTAARFSS 79 G A RFSS Sbjct: 1125 SG-AYRFSS 1132
>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor| Length = 1763 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/49 (36%), Positives = 21/49 (42%) Frame = +2 Query: 119 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 265 G+ R Q G PG V AP P P P+G E G G+ K G Sbjct: 624 GETGFPGPRGQEGLPGKPGIVGAPGLPGPPGPKG---EPGLTGLPEKPG 669 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Frame = +2 Query: 161 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGE 298 KG G AP P PV P+G+ G G++ + G G+ PR GE Sbjct: 1186 KGEAGFPGAPGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGE 1236
>YO61_CAEEL (P34600) Hypothetical protein ZK1098.1 in chromosome III| Length = 724 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = -1 Query: 171 GAPFQGTWARSVAEDASPDYNSDGTAARFSSWAVPGSLAVTRG 43 G P QG W +++D P Y + T + + W P +T+G Sbjct: 122 GQPQQGQWKEFMSDDGKPYYYN--TLTKKTQWVKPDGEEITKG 162
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +2 Query: 119 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 265 G + DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065
>PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9| Length = 736 Score = 29.6 bits (65), Expect = 4.0 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 2/77 (2%) Frame = +2 Query: 65 PGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCL 244 PG + + + +P L + + R GAP R R + VAPR A + Sbjct: 558 PGAESVIHPSMMPQPLNASRTDLSISRNSPGPGGAPARSRTSEYYEDVAPRFATPDPSLR 617 Query: 245 G--MQPKSGGRLRPRLN 289 G + ++GGR+ P +N Sbjct: 618 GTPVPGQAGGRIPPPIN 634
>SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,| arginine/serine-rich 2-interacting protein) (SC35-interacting protein 1) (CTD-associated SR protein 11) (Splicing regulatory protein 129) (SRrp129) (NY-REN-40 antigen) Length = 1148 Score = 29.6 bits (65), Expect = 4.0 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 5/117 (4%) Frame = +3 Query: 69 EQPSLRIGRLCRPNCSLETR---PQRRTGPKSPGKGRLGG*EPRPARTLSP-HEARSTSR 236 ++P R R P+ + PQ + P+SP R G E R +++ SP +E+ + Sbjct: 470 KKPRTRRSRFHSPSTTWSPNKDTPQEKKRPQSPSPRRETGKESRKSQSPSPKNESARGRK 529 Query: 237 VVWECSPNRAVDSVQG*IQARDR*RTSTAR-ER*KGLSPPTTTSASYCHCQPQLTRS 404 SP + + + Q+R R +T R + LSP TS QP++ S Sbjct: 530 KSRSQSPKKDIARERRQSQSRSPKRDTTRESRRSESLSPRRETSRENKRSQPRVKDS 586
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/39 (38%), Positives = 16/39 (41%) Frame = +2 Query: 164 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 280 G PG PSGP P P G +G G GG P Sbjct: 171 GNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 940 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/46 (39%), Positives = 18/46 (39%) Frame = +1 Query: 139 GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TP 276 GPGP P RG P P P RG R G G GR P Sbjct: 697 GPGPGPYHRGRGGRGGNEPPPPPPPPFRGARGGRSGGGPPNGRGGP 742
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = +2 Query: 119 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 265 G DR + G PG AP P PV P G + G G +G Sbjct: 1024 GSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1072 Score = 28.9 bits (63), Expect = 6.8 Identities = 21/70 (30%), Positives = 26/70 (37%) Frame = +2 Query: 56 ASEPGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES 235 A PG A VP +L + S A +G PG P P PRGA Sbjct: 645 AGPPGEAGKPGEQGVPGDLGAPGPSGARGE-----RGFPGERGVQGPPGPAGPRGANGAP 699 Query: 236 GCLGMQPKSG 265 G G + +G Sbjct: 700 GNDGAKGDAG 709 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Frame = +2 Query: 164 GAPG--RVRAPSGPD----PVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYRE 325 GAPG R PSGP P P+G E G G + +G + P + P E Sbjct: 403 GAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEE 462 Query: 326 GK 331 GK Sbjct: 463 GK 464
>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1183 Score = 29.3 bits (64), Expect = 5.2 Identities = 20/82 (24%), Positives = 29/82 (35%) Frame = +1 Query: 127 VLSDGPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYRRETD 306 V S GP P P G + PGP PT Q P+ A + + Sbjct: 435 VWSQGPPPPPPPYGRLLPNNNTHPGPFPPT-----------GGQSTAHPPAPAHHHHQQQ 483 Query: 307 SEQVPRGKDEKDSHHQRPPAPP 372 + P+ + ++ H P PP Sbjct: 484 QQPQPQPQPQQHHHGNSGPPPP 505
>IE63_SHV21 (P13199) 52 kDa immediate-early phosphoprotein| Length = 417 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%) Frame = -3 Query: 271 STARFG----LHSQTTRLVDRASWGDRVRAGRGSHPPRRPF 161 S RFG + S +T + SW DRVR P RPF Sbjct: 85 SPMRFGKRPRISSNSTSRSCKTSWADRVREAAAQRRPSRPF 125
>SASH1_HUMAN (O94885) SAM and SH3 domain-containing protein 1 (Proline-glutamate| repeat-containing protein) Length = 1247 Score = 29.3 bits (64), Expect = 5.2 Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 9/77 (11%) Frame = -1 Query: 249 IPKQPDSLTAPRG----ATG-----SGPDGALTLPGAPFQGTWARSVAEDASPDYNSDGT 97 IP QP + A + A G GP GAL P AP S A SP Sbjct: 980 IPSQPPPVPAKKSRERLANGLHPVPMGPSGALPSPDAPCLPVKRGSPASPTSPSDCPPAL 1039 Query: 96 AARFSSWAVPGSLAVTR 46 A R S PGS TR Sbjct: 1040 APRPLSGQAPGSPPSTR 1056
>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2132 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +2 Query: 122 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQP-KSGGRLRPRLNTG 295 ++ SA+ +VPW P R PSG + +P G+ + SG + SGG + +G Sbjct: 868 ESGSASGDGEVPWSHTPTVGRLPSGGE--SPEGSASASGTGDLSGLPSGGEITETSTSG 924
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = +2 Query: 161 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRL 286 KG PG P P P G + G +GM + G R P L Sbjct: 965 KGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGL 1006
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 Query: 158 WKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGG 268 W+ P R P D V PRG + GC G GG Sbjct: 1624 WRRGPRPRRRPGLTDRVPPRGGPSPRGCRGAGRAGGG 1660
>OTO1_ONCKE (P83371) Otolin-1 precursor| Length = 508 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +2 Query: 119 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLN 289 GD D+ GAPG + + P+G E+G G++ G R +P N Sbjct: 189 GDKGDKGDQGDTGMPGAPGILGKEGPKGDLGPKGEKGETGLPGLKGDLGERGKPGWN 245
>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)| Length = 210 Score = 29.3 bits (64), Expect = 5.2 Identities = 19/52 (36%), Positives = 21/52 (40%) Frame = +2 Query: 164 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKY 319 GAPG AP P PRG G G G +P GER + KY Sbjct: 145 GAPGHPGAPGAPGEKGPRGQDGHPGAPGNAGHPGQPGQPG-PPGERGVCPKY 195
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +2 Query: 161 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRL 286 KG PG V P P P G E G G+ G + P L Sbjct: 619 KGEPGNVGPAGAPGPAGPGGIPGERGVAGVPGGKGEKGAPGL 660 Score = 29.3 bits (64), Expect = 5.2 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%) Frame = +2 Query: 164 GAPGRVRAPSGPDPVAP---RGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYREGK 331 G PG P P P P RG V E G G + +SG + P P EGK Sbjct: 320 GLPGPRGIPGPPGPAGPSGARGLVGEPGPAGAKGESGNKGEPGAAGPPGPPGPSGEEGK 378 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/55 (32%), Positives = 20/55 (36%) Frame = +2 Query: 116 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 280 SG + QV G PG P PV P GA G G Q G + P Sbjct: 955 SGALGAPGPHGQVGPSGKPGNRGDPGPVGPVGPAGAFGPRGLAGPQGPRGEKGEP 1009
>RL15_STAES (Q8CRH9) 50S ribosomal protein L15| Length = 146 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +2 Query: 161 KGAPG--RVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 307 K A G RVR G G + G G + +SGG++RP G+ P+ Sbjct: 7 KAAEGSRRVRNRVGRGAATGNGKTSGRGQKGQKARSGGKVRPGFEGGQLPL 57
>POL_SIVG1 (Q02836) Pol polyprotein [Contains: Protease (Retropepsin) (EC| 3.4.23.-); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] Length = 1057 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Frame = +1 Query: 43 SPSNGERTGNSPA*E-SGGCAVRIVVWRR-----VLSDGPGPSPLERGA 171 +P GERT E SGGC + + +WRR ++ P + L+ GA Sbjct: 69 APERGERTDKETEGERSGGCFLELPLWRRPMKRVIIEGTPVQALLDTGA 117
>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2| Length = 953 Score = 28.9 bits (63), Expect = 6.8 Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 1/107 (0%) Frame = +1 Query: 43 SPSNGERTGNSPA*ESGGCAVRIVVWRRVLSDGPGPSPLERGA-WEGESPVRPGPCRPTR 219 +P + R PA + GG A R+ S GP P+P G G +P G RP Sbjct: 153 TPGSMPRPQAKPAPKPGGRAPRVA--NNPFSSGPRPAPRPGGGNRSGNAPRPGGGPRPGG 210 Query: 220 RGQRVGLFGNAAQIGR*TPSKAKYRRETDSEQVPRGKDEKDSHHQRP 360 + G G A + R + R + S G E+ +RP Sbjct: 211 NRPQGGQGGPAERAPRPGGRGGQPRPQGGSRSQQSGGQERQGGGRRP 257
>COL39_CAEEL (Q09455) Cuticle collagen 39 precursor| Length = 323 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +2 Query: 164 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 271 G+PG AP P P P G G G Q +G R Sbjct: 138 GSPGPAGAPGAPGPQGPNGQPGHPGQGGSQGPAGPR 173
>APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa precursor| (45/47 kDa antigen) (Fibronectin attachment protein) (FAP-A) Length = 381 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/53 (28%), Positives = 21/53 (39%) Frame = +2 Query: 65 PGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGA 223 PG +A P+ +G R +P + P P+G P AP GA Sbjct: 63 PGQPADNAQAGAPAPAPNGQQRPPRRRRMIPTRAPPPAGAPPNGAPPAAPNGA 115
>PTPA1_USTMA (Q4P4W3) Serine/threonine-protein phosphatase 2A activator 1 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1) (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl phosphatase activator 1) Length = 487 Score = 28.9 bits (63), Expect = 6.8 Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 14/92 (15%) Frame = -2 Query: 371 GGAGGRWW*ESFSSFPR-GTCSLSVS-RLYLALDGVYRPIWAAFPNNP--TR*P------ 222 GG G W ++ S PR T S V+ R +L L G+ + + P TR P Sbjct: 393 GGVGWVWTHQAHSELPRLATPSAPVAARRHLPLGGIQGNMTSMGVPTPRITRPPATPDSF 452 Query: 221 ----RLVGRQGPGRTGLSPSQAPLSRGLGPGP 138 RL R P R +PS PL+ P P Sbjct: 453 DHPLRLPPRSTPSRPSTTPSVPPLAASTRPAP 484
>SPT5H_BRARE (Q9DDT5) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) (Protein foggy) Length = 1084 Score = 28.9 bits (63), Expect = 6.8 Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = -3 Query: 277 TESTARFGLHSQ-TTRLVDR---ASWGDRVRAGRGSHPPRRPFPGDLGPV 140 TESTAR LHS T VDR + G + R GR S R P G P+ Sbjct: 726 TESTARVELHSTCQTISVDRQRLTTVGGKERQGRSSTHLRTPMYGSQTPI 775
>HSV2_EMENI (Q5B464) SVP1-like protein 2| Length = 317 Score = 28.9 bits (63), Expect = 6.8 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%) Frame = -1 Query: 333 IFPSRYLFAIGLSPVFSLGRSLP-----PDLGCIPKQPDSLTAPRGATGSGPDGALTLPG 169 +F Y FA S F LG P P LG + +P P+G G D + + G Sbjct: 231 VFSDVYSFA---SAHFELGEEEPGPTYAPPLGTVLGRP-----PKGVIGWSNDNTILVVG 282 Query: 168 APFQGTWARSVAED 127 + G W + V D Sbjct: 283 SGSDGRWEKFVLRD 296
>VL2_BPV1 (P03109) Minor capsid protein L2| Length = 469 Score = 28.9 bits (63), Expect = 6.8 Identities = 30/76 (39%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = -1 Query: 267 PPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARS-VAEDASPDYNSDGTAA 91 PPD+ IPK A + G A+ L G GTW+ VA SP Y TA Sbjct: 26 PPDV--IPKVEGDTIADKILKFGGL--AIYLGGLGI-GTWSTGRVAAGGSPRYTPLRTAG 80 Query: 90 RFSSWAVPGSLAVTRG 43 SS A GS AVT G Sbjct: 81 STSSLASIGSRAVTAG 96
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.9 bits (63), Expect = 6.8 Identities = 29/112 (25%), Positives = 35/112 (31%), Gaps = 6/112 (5%) Frame = +1 Query: 139 GPGPSPLERGAWEGESPV----RPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYRRETD 306 GP SP ERGA P+ RPGP P G+ G IG Sbjct: 1012 GPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIG-------------- 1057 Query: 307 SEQVPRGKD--EKDSHHQRPPAPPTVTXXXXXXXXXXXXXXXXXDGGRGDHG 456 P G+D + P PP V G +G+HG Sbjct: 1058 ----PTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHG 1105
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.9 bits (63), Expect = 6.8 Identities = 29/112 (25%), Positives = 35/112 (31%), Gaps = 6/112 (5%) Frame = +1 Query: 139 GPGPSPLERGAWEGESPV----RPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYRRETD 306 GP SP ERGA P+ RPGP P G+ G IG Sbjct: 1012 GPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIG-------------- 1057 Query: 307 SEQVPRGKD--EKDSHHQRPPAPPTVTXXXXXXXXXXXXXXXXXDGGRGDHG 456 P G+D + P PP V G +G+HG Sbjct: 1058 ----PTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHG 1105
>CNTP4_HUMAN (Q9C0A0) Contactin-associated protein-like 4 precursor (Cell| recognition molecule Caspr4) Length = 1308 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +2 Query: 188 PSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNT 292 PS PDPV G V ES C+ QP + R R ++ Sbjct: 1185 PSHPDPVTVTGHVTESSCMA-QPGTDATSRERTHS 1218
>PKHA4_MOUSE (Q8VC98) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 588 Score = 28.9 bits (63), Expect = 6.8 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 6/64 (9%) Frame = -2 Query: 224 PRLVGRQGPGRTGLSPSQAPLSRGLG------PGPSLRTRLQTTIRTAQPPDSQAGLFPV 63 P V R+ GR SP A LSRGLG P ++ + T R + P+ + L Sbjct: 180 PPEVNRREEGRISESPEVARLSRGLGRHETHTPNSTVDLQTDTWSRRTRSPELFSPLSRP 239 Query: 62 RSPL 51 SPL Sbjct: 240 PSPL 243
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 28.5 bits (62), Expect = 8.9 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 7/79 (8%) Frame = +3 Query: 69 EQPSLRIGRLCRPNCSLETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARSTSRVVWE 248 E P L+ RL +C L P R G SP + LGG R T + S V E Sbjct: 134 EHPCLKAPRLRCQSCKLAQAPGLRAGEGSPEES-LGGRRKRNVNTAPQFQPPSYQATVPE 192 Query: 249 CSPN-------RAVDSVQG 284 P RA+D +G Sbjct: 193 NQPAGTSVASLRAIDPDEG 211
>C1QB_RAT (P31721) Complement C1q subcomponent subunit B precursor| Length = 253 Score = 28.5 bits (62), Expect = 8.9 Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 8/96 (8%) Frame = +2 Query: 41 IPLVTASE--PGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRV--RAPSGPD-- 202 IP V S+ PGT ++ +P +GD ++ G PG+V + P GP Sbjct: 41 IPGVPGSDGKPGTPGIKGEKGLPGL--AGDHGELGEKGDAGIPGIPGKVGPKGPVGPKGA 98 Query: 203 --PVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERP 304 P PRG SG K +N+ RP Sbjct: 99 PGPPGPRGPKGGSGDYKATQKVAFSALRTVNSALRP 134
>PLXB1_HUMAN (O43157) Plexin-B1 precursor (Semaphorin receptor SEP)| Length = 2135 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/61 (32%), Positives = 26/61 (42%) Frame = -1 Query: 237 PDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDYNSDGTAARFSSWAVPGSL 58 P TAP+ PD PGAP T A ++ ASP S + WA GS+ Sbjct: 692 PSPPTAPKALATPAPDTLPVEPGAPSTAT-ASDISPGASPSLLSP-----WGPWAGSGSI 745 Query: 57 A 55 + Sbjct: 746 S 746
>EFNB3_MOUSE (O35393) Ephrin-B3 precursor| Length = 340 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Frame = -1 Query: 303 GLSPVFSLGRSLPPDLGCIPKQPDS---LTAPRGATGSGPDGALTLPGAPFQGTWARSVA 133 G+ + +G+S P G +P++P S + RGA S G T+PG P +R Sbjct: 160 GMKVLLRVGQS--PRGGAVPRKPVSEMPMERDRGAAHSAEPGRDTIPGDPSSNATSRGAE 217 Query: 132 EDASP 118 P Sbjct: 218 GPLPP 222
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +2 Query: 65 PGTAQLENRAAVPSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESG 238 PG A A P E G+ +R + G PG P P P P+ +V+E G Sbjct: 2045 PGRAGGVGEAGRPGE--RGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPG 2100
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 164 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 265 GAPG AP P P P G +G LG + ++G Sbjct: 238 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTG 271
>SRBP1_RAT (P56720) Sterol regulatory element-binding protein 1 (SREBP-1)| (Sterol regulatory element-binding transcription factor 1) (Adipocyte determination- and differentiation-dependent factor 1) (ADD1) (Fragment) Length = 1024 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = -2 Query: 200 PGRTGLSPSQAPL--SRGLGPGPSLRTRLQTTIRTAQPPDSQA 78 PG T +PS PL + G+ P P L T++Q++ PP S A Sbjct: 151 PGNTQQTPSSLPLGSTPGISPTP-LHTQVQSSAAQQPPPASAA 192
>CKR1_CHICK (P30373) Zinc finger protein CKR1| Length = 509 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/60 (28%), Positives = 24/60 (40%) Frame = -3 Query: 217 SWGDRVRAGRGSHPPRRPFPGDLGPVRR*GRVSRLQFGRHSRPILKLGCSRFARRY*GNP 38 +W ++ R H RPFP L R + LQ G+ RP C +R+ P Sbjct: 313 AWASHLQRHRRVHTGERPFPCGLCGERFSQKAHLLQHGKTHRPERPYKCGDCGKRFENAP 372
>CAS4_EPHMU (P18503) Short-chain collagen C4 (Fragment)| Length = 366 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +2 Query: 161 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 265 +GAPG AP P P P+G + G G + G Sbjct: 48 QGAPGAPGAPGLPGPAGPQGPKGDKGLPGNDGQPG 82 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,794,215 Number of Sequences: 219361 Number of extensions: 1825497 Number of successful extensions: 8746 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 6609 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8590 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
