ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet20a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185195.1| Oryza sativa (japonica cultivar-group), mRNA 377 e-101
2dbj|AK102089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 377 e-101
3dbj|AK059137.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 2e-98
4gb|AY110305.1| Zea mays CL8986_1 mRNA sequence 341 1e-90
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 113 5e-22
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
7gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genom... 113 5e-22
8gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genom... 113 5e-22
9ref|NM_185196.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
10ref|XM_323079.1| Neurospora crassa OR74A hypothetical protein ( ... 46 0.10
11ref|XM_956032.1| Neurospora crassa OR74A hypothetical protein ( ... 46 0.10
12gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome 46 0.10
13ref|XM_961644.1| PREDICTED: Tribolium castaneum similar to actin... 46 0.10
14emb|AL513466.1|NCB18D24 Neurospora crassa DNA linkage group V BA... 46 0.10
15gb|DQ279986.1| Bolinus brandaris 28S ribosomal RNA gene, partial... 44 0.41
16gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 44 0.41
17gb|BT009544.1| Triticum aestivum clone wr1.pk148.a5:fis, full in... 44 0.41
18gb|AC091331.14| Mus musculus chromosome 1, clone RP23-293F4, com... 42 1.6
19ref|NM_014686.2| Homo sapiens KIAA0355 (KIAA0355), mRNA 42 1.6
20gb|BC017790.2| Homo sapiens KIAA0355, mRNA (cDNA clone IMAGE:461... 42 1.6
21gb|AY388625.1| Plodia interpunctella cyclin A mRNA, partial cds 42 1.6
22emb|CR686106.2|CNS0FSCM Tetraodon nigroviridis full-length cDNA 42 1.6
23emb|CR857584.1| Pongo pygmaeus mRNA; cDNA DKFZp469A1915 (from cl... 42 1.6
24gb|AC092080.2| Homo sapiens chromosome 19 clone CTD-2094A2, comp... 42 1.6
25gb|AC010614.8| Homo sapiens chromosome 19 clone CTD-2518G19, com... 42 1.6
26gb|AC154331.1| Mus musculus BAC clone RP23-256F11 from chromosom... 42 1.6
27gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome... 42 1.6
28dbj|AB002353.1| Homo sapiens mRNA for KIAA0355 gene, partial cds 42 1.6
29emb|Z95704.1|HS4PTEL Human DNA sequence from 4PTEL, Huntington's... 42 1.6
30emb|CT010488.9| Mouse DNA sequence from clone RP23-133A3 on chro... 40 6.4
31gb|AC123817.4| Mus musculus BAC clone RP24-255D13 from chromosom... 40 6.4
32gb|AC113527.8| Mus musculus chromosome 9, clone RP23-314E23, com... 40 6.4
33emb|BX942818.8| Zebrafish DNA sequence from clone CH211-285L17 i... 40 6.4
34gb|AY113475.1| Drosophila melanogaster RE43724 full insert cDNA 40 6.4
35ref|NM_135152.2| Drosophila melanogaster Arc-p20 CG5972-RA (Arc-... 40 6.4
36dbj|AK139643.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 40 6.4
37gb|AC093900.3| Homo sapiens BAC clone RP11-730E1 from 4, complet... 40 6.4
38gb|AF325155.1|AF325155 Spodoptera litura nucleopolyhedrovirus st... 40 6.4
39gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, r... 40 6.4
40gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.4
41gb|AC154440.2| Mus musculus BAC clone RP24-175D9 from 9, complet... 40 6.4
42gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21... 40 6.4
43gb|AC004639.1|AC004639 Drosophila melanogaster DNA sequence (P1 ... 40 6.4
44emb|AL669982.10| Mouse DNA sequence from clone RP23-297N24 on ch... 40 6.4 
>ref|NM_185195.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1056

 Score =  377 bits (190), Expect = e-101
 Identities = 286/318 (89%)
 Strand = Plus / Plus

                                                                       
Query: 159 ccatggccaacacgctgcgtctgtacctcacttgcatccgcaacactctggaggccgcca 218
           ||||||| || ||||||||  |||| |||||||||||  | |||||||||||||| ||||
Sbjct: 108 ccatggctaatacgctgcgattgtatctcacttgcataaggaacactctggaggctgcca 167

                                                                       
Query: 219 tgtgcctgcagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggagc 278
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 tgtgcctgcagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggagc 227

                                                                       
Query: 279 tcaagactagccctgaacttctgctgaatccggtgcttatatgtcgtaatgaagccgaga 338
           | |||||||||||||||||||||||||| || ||||| || || ||||||||||| || |
Sbjct: 228 taaagactagccctgaacttctgctgaacccagtgctcatttgccgtaatgaagcagaaa 287

                                                                       
Query: 339 agtgtttggtagagacttcaatcaattcgatccgtataagcttgaaggttaagcaggcag 398
           |||||||| |||||||||||||||| || || ||||| ||| ||||||| || |||||||
Sbjct: 288 agtgtttgatagagacttcaatcaactctattcgtattagcatgaaggtcaaacaggcag 347

                                                                       
Query: 399 atgaactagaaaatattcttgcaaagaagttccttaggtttttgtcgatgagggcagagg 458
           |||| |||||||||||||||||||||||||| ||||||||||| || ||||| ||||| |
Sbjct: 348 atgagctagaaaatattcttgcaaagaagtttcttaggtttttatcaatgagagcagaag 407

                             
Query: 459 cattccaagtgttgagga 476
           ||||||||||| ||||||
Sbjct: 408 cattccaagtgctgagga 425
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>dbj|AK102089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082P03, full
           insert sequence
          Length = 1015

 Score =  377 bits (190), Expect = e-101
 Identities = 286/318 (89%)
 Strand = Plus / Plus

                                                                       
Query: 159 ccatggccaacacgctgcgtctgtacctcacttgcatccgcaacactctggaggccgcca 218
           ||||||| || ||||||||  |||| |||||||||||  | |||||||||||||| ||||
Sbjct: 122 ccatggctaatacgctgcgattgtatctcacttgcataaggaacactctggaggctgcca 181

                                                                       
Query: 219 tgtgcctgcagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggagc 278
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgtgcctgcagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggagc 241

                                                                       
Query: 279 tcaagactagccctgaacttctgctgaatccggtgcttatatgtcgtaatgaagccgaga 338
           | |||||||||||||||||||||||||| || ||||| || || ||||||||||| || |
Sbjct: 242 taaagactagccctgaacttctgctgaacccagtgctcatttgccgtaatgaagcagaaa 301

                                                                       
Query: 339 agtgtttggtagagacttcaatcaattcgatccgtataagcttgaaggttaagcaggcag 398
           |||||||| |||||||||||||||| || || ||||| ||| ||||||| || |||||||
Sbjct: 302 agtgtttgatagagacttcaatcaactctattcgtattagcatgaaggtcaaacaggcag 361

                                                                       
Query: 399 atgaactagaaaatattcttgcaaagaagttccttaggtttttgtcgatgagggcagagg 458
           |||| |||||||||||||||||||||||||| ||||||||||| || ||||| ||||| |
Sbjct: 362 atgagctagaaaatattcttgcaaagaagtttcttaggtttttatcaatgagagcagaag 421

                             
Query: 459 cattccaagtgttgagga 476
           ||||||||||| ||||||
Sbjct: 422 cattccaagtgctgagga 439
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>dbj|AK059137.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-H07, full
           insert sequence
          Length = 750

 Score =  367 bits (185), Expect = 2e-98
 Identities = 269/297 (90%)
 Strand = Plus / Plus

                                                                       
Query: 180 tgtacctcacttgcatccgcaacactctggaggccgccatgtgcctgcagaatttccctt 239
           |||| |||||||||||  | |||||||||||||| |||||||||||||||||||||||||
Sbjct: 9   tgtatctcacttgcataaggaacactctggaggctgccatgtgcctgcagaatttccctt 68

                                                                       
Query: 240 gccaagaggtcgagaggcacaacaaaccggaggtggagctcaagactagccctgaacttc 299
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 69  gccaagaggtcgagaggcacaacaaaccggaggtggagctaaagactagccctgaacttc 128

                                                                       
Query: 300 tgctgaatccggtgcttatatgtcgtaatgaagccgagaagtgtttggtagagacttcaa 359
           ||||||| || ||||| || || ||||||||||| || ||||||||| ||||||||||||
Sbjct: 129 tgctgaacccagtgctcatttgccgtaatgaagcagaaaagtgtttgatagagacttcaa 188

                                                                       
Query: 360 tcaattcgatccgtataagcttgaaggttaagcaggcagatgaactagaaaatattcttg 419
           |||| || || ||||| ||| ||||||| || ||||||||||| ||||||||||||||||
Sbjct: 189 tcaactctattcgtattagcatgaaggtcaaacaggcagatgagctagaaaatattcttg 248

                                                                    
Query: 420 caaagaagttccttaggtttttgtcgatgagggcagaggcattccaagtgttgagga 476
           |||||||||| ||||||||||| || ||||| ||||| |||||||||||| ||||||
Sbjct: 249 caaagaagtttcttaggtttttatcaatgagagcagaagcattccaagtgctgagga 305
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>gb|AY110305.1| Zea mays CL8986_1 mRNA sequence
          Length = 756

 Score =  341 bits (172), Expect = 1e-90
 Identities = 276/314 (87%)
 Strand = Plus / Minus

                                                                       
Query: 163 ggccaacacgctgcgtctgtacctcacttgcatccgcaacactctggaggccgccatgtg 222
           |||||| ||||||||  |||||||||| |||||||| |||||||||||||| || |||||
Sbjct: 708 ggccaatacgctgcggttgtacctcacctgcatccggaacactctggaggcggcgatgtg 649

                                                                       
Query: 223 cctgcagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggagctcaa 282
           ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 648 cctccagaatttcccttgccaagaagtcgagaggcacaacaaaccggaggtggagctcaa 589

                                                                       
Query: 283 gactagccctgaacttctgctgaatccggtgcttatatgtcgtaatgaagccgagaagtg 342
           ||| |||||||||||||||||||||||||| || ||||| || || ||||| |     ||
Sbjct: 588 gacaagccctgaacttctgctgaatccggtactgatatgccgcaacgaagcagnnnnntg 529

                                                                       
Query: 343 tttggtagagacttcaatcaattcgatccgtataagcttgaaggttaagcaggcagatga 402
            ||| |||||||||||||||| || || ||||||||| ||||||||||||||||||||||
Sbjct: 528 cttgatagagacttcaatcaactccatacgtataagcatgaaggttaagcaggcagatga 469

                                                                       
Query: 403 actagaaaatattcttgcaaagaagttccttaggtttttgtcgatgagggcagaggcatt 462
           | | || || |||||||| |||||||||||||||     ||| |||||||||||||||||
Sbjct: 468 attggagaacattcttgccaagaagttccttaggnnnnngtcaatgagggcagaggcatt 409

                         
Query: 463 ccaagtgttgagga 476
           ||||||||||||||
Sbjct: 408 ccaagtgttgagga 395
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  113 bits (57), Expect = 5e-22
 Identities = 78/85 (91%)
 Strand = Plus / Plus

                                                                            
Query: 392      caggcagatgaactagaaaatattcttgcaaagaagttccttaggtttttgtcgatgagg 451
                ||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||| 
Sbjct: 35367954 caggcagatgagctagaaaatattcttgcaaagaagtttcttaggtttttatcaatgaga 35368013

                                         
Query: 452      gcagaggcattccaagtgttgagga 476
                ||||| |||||||||||| ||||||
Sbjct: 35368014 gcagaagcattccaagtgctgagga 35368038



 Score =  105 bits (53), Expect = 1e-19
 Identities = 53/53 (100%)
 Strand = Plus / Plus

                                                                     
Query: 227      cagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggagct 279
                |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35366438 cagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggagct 35366490



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                            
Query: 310      ggtgcttatatgtcgtaatgaagccgagaagtgtttggtagagacttcaatcaattcgat 369
                |||||| || || ||||||||||| || ||||||||| |||||||||||||||| || ||
Sbjct: 35367764 ggtgctcatttgccgtaatgaagcagaaaagtgtttgatagagacttcaatcaactctat 35367823

                                  
Query: 370      ccgtataagcttgaaggt 387
                 ||||| ||| |||||||
Sbjct: 35367824 tcgtattagcatgaaggt 35367841



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                            
Query: 170      acgctgcgtctgtacctcacttgcatccgcaacactctggaggccgccatgtgcctgcag 229
                ||||||||  |||| |||||||||||  | |||||||||||||| |||||||||||||||
Sbjct: 35366248 acgctgcgattgtatctcacttgcataaggaacactctggaggctgccatgtgcctgcag 35366307



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 283      gactagccctgaacttctgctgaa 306
                ||||||||||||||||||||||||
Sbjct: 35367070 gactagccctgaacttctgctgaa 35367093
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  113 bits (57), Expect = 5e-22
 Identities = 78/85 (91%)
 Strand = Plus / Plus

                                                                            
Query: 392      caggcagatgaactagaaaatattcttgcaaagaagttccttaggtttttgtcgatgagg 451
                ||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||| 
Sbjct: 35458026 caggcagatgagctagaaaatattcttgcaaagaagtttcttaggtttttatcaatgaga 35458085

                                         
Query: 452      gcagaggcattccaagtgttgagga 476
                ||||| |||||||||||| ||||||
Sbjct: 35458086 gcagaagcattccaagtgctgagga 35458110



 Score =  105 bits (53), Expect = 1e-19
 Identities = 53/53 (100%)
 Strand = Plus / Plus

                                                                     
Query: 227      cagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggagct 279
                |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35456510 cagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggagct 35456562



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                            
Query: 310      ggtgcttatatgtcgtaatgaagccgagaagtgtttggtagagacttcaatcaattcgat 369
                |||||| || || ||||||||||| || ||||||||| |||||||||||||||| || ||
Sbjct: 35457836 ggtgctcatttgccgtaatgaagcagaaaagtgtttgatagagacttcaatcaactctat 35457895

                                  
Query: 370      ccgtataagcttgaaggt 387
                 ||||| ||| |||||||
Sbjct: 35457896 tcgtattagcatgaaggt 35457913



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                            
Query: 170      acgctgcgtctgtacctcacttgcatccgcaacactctggaggccgccatgtgcctgcag 229
                ||||||||  |||| |||||||||||  | |||||||||||||| |||||||||||||||
Sbjct: 35456320 acgctgcgattgtatctcacttgcataaggaacactctggaggctgccatgtgcctgcag 35456379



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 283      gactagccctgaacttctgctgaa 306
                ||||||||||||||||||||||||
Sbjct: 35457142 gactagccctgaacttctgctgaa 35457165
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>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence,
           complete sequence
          Length = 116443

 Score =  113 bits (57), Expect = 5e-22
 Identities = 78/85 (91%)
 Strand = Plus / Minus

                                                                       
Query: 392 caggcagatgaactagaaaatattcttgcaaagaagttccttaggtttttgtcgatgagg 451
           ||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||| 
Sbjct: 500 caggcagatgagctagaaaatattcttgcaaagaagtttcttaggtttttatcaatgaga 441

                                    
Query: 452 gcagaggcattccaagtgttgagga 476
           ||||| |||||||||||| ||||||
Sbjct: 440 gcagaagcattccaagtgctgagga 416



 Score =  105 bits (53), Expect = 1e-19
 Identities = 53/53 (100%)
 Strand = Plus / Minus

                                                                 
Query: 227  cagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggagct 279
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2016 cagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggagct 1964



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                       
Query: 310 ggtgcttatatgtcgtaatgaagccgagaagtgtttggtagagacttcaatcaattcgat 369
           |||||| || || ||||||||||| || ||||||||| |||||||||||||||| || ||
Sbjct: 690 ggtgctcatttgccgtaatgaagcagaaaagtgtttgatagagacttcaatcaactctat 631

                             
Query: 370 ccgtataagcttgaaggt 387
            ||||| ||| |||||||
Sbjct: 630 tcgtattagcatgaaggt 613



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                        
Query: 170  acgctgcgtctgtacctcacttgcatccgcaacactctggaggccgccatgtgcctgcag 229
            ||||||||  |||| |||||||||||  | |||||||||||||| |||||||||||||||
Sbjct: 2206 acgctgcgattgtatctcacttgcataaggaacactctggaggctgccatgtgcctgcag 2147



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 283  gactagccctgaacttctgctgaa 306
            ||||||||||||||||||||||||
Sbjct: 1384 gactagccctgaacttctgctgaa 1361
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>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete
              sequence
          Length = 133846

 Score =  113 bits (57), Expect = 5e-22
 Identities = 78/85 (91%)
 Strand = Plus / Minus

                                                                          
Query: 392    caggcagatgaactagaaaatattcttgcaaagaagttccttaggtttttgtcgatgagg 451
              ||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||| 
Sbjct: 119672 caggcagatgagctagaaaatattcttgcaaagaagtttcttaggtttttatcaatgaga 119613

                                       
Query: 452    gcagaggcattccaagtgttgagga 476
              ||||| |||||||||||| ||||||
Sbjct: 119612 gcagaagcattccaagtgctgagga 119588



 Score =  105 bits (53), Expect = 1e-19
 Identities = 53/53 (100%)
 Strand = Plus / Minus

                                                                   
Query: 227    cagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggagct 279
              |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121188 cagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggagct 121136



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                          
Query: 310    ggtgcttatatgtcgtaatgaagccgagaagtgtttggtagagacttcaatcaattcgat 369
              |||||| || || ||||||||||| || ||||||||| |||||||||||||||| || ||
Sbjct: 119862 ggtgctcatttgccgtaatgaagcagaaaagtgtttgatagagacttcaatcaactctat 119803

                                
Query: 370    ccgtataagcttgaaggt 387
               ||||| ||| |||||||
Sbjct: 119802 tcgtattagcatgaaggt 119785



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                          
Query: 170    acgctgcgtctgtacctcacttgcatccgcaacactctggaggccgccatgtgcctgcag 229
              ||||||||  |||| |||||||||||  | |||||||||||||| |||||||||||||||
Sbjct: 121378 acgctgcgattgtatctcacttgcataaggaacactctggaggctgccatgtgcctgcag 121319



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 283    gactagccctgaacttctgctgaa 306
              ||||||||||||||||||||||||
Sbjct: 120556 gactagccctgaacttctgctgaa 120533
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>ref|NM_185196.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 267

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 200 aacactctggaggccgccatgtgcctgcag 229
           |||||||||||||| |||||||||||||||
Sbjct: 45  aacactctggaggctgccatgtgcctgcag 16
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>ref|XM_323079.1| Neurospora crassa OR74A hypothetical protein ( (AL513466) probable
           glycerone kinase isoform [Neurospora crassa OR74A]  )
           (NCU03779.1) partial mRNA
          Length = 1950

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 56  cttccccaccaactccggcaacc 78
           |||||||||||||||||||||||
Sbjct: 825 cttccccaccaactccggcaacc 803
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>ref|XM_956032.1| Neurospora crassa OR74A hypothetical protein ( (AL513466) probable
           glycerone kinase isoform [Neurospora crassa OR74A]  )
           (NCU03779.1) partial mRNA
          Length = 1950

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 56  cttccccaccaactccggcaacc 78
           |||||||||||||||||||||||
Sbjct: 825 cttccccaccaactccggcaacc 803
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>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome
          Length = 241087

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 205    tctggaggccgccatgtgcctgc 227
              |||||||||||||||||||||||
Sbjct: 112881 tctggaggccgccatgtgcctgc 112903
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>ref|XM_961644.1| PREDICTED: Tribolium castaneum similar to actin related protein 2/3
           complex, subunit 4 (LOC655135), mRNA
          Length = 552

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 211 ggccgccatgtgcctgcagaatttcccttgccaagaggtcgagaggcacaacaaaccgga 270
           |||||||||||||||| |||| ||| | | ||| | ||| || ||||||||||| |||||
Sbjct: 96  ggccgccatgtgcctggagaacttctcctcccaggtggtggaaaggcacaacaagccgga 155

              
Query: 271 ggt 273
           |||
Sbjct: 156 ggt 158
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>emb|AL513466.1|NCB18D24 Neurospora crassa DNA linkage group V BAC contig B18D24
          Length = 157180

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 56     cttccccaccaactccggcaacc 78
              |||||||||||||||||||||||
Sbjct: 127261 cttccccaccaactccggcaacc 127239
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>gb|DQ279986.1| Bolinus brandaris 28S ribosomal RNA gene, partial sequence
          Length = 2070

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 70  ccggcaaccggcggccaccccgccctcccg 99
           ||||||||||| |||| |||||||||||||
Sbjct: 616 ccggcaaccgggggccgccccgccctcccg 645
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 53      cgccttccccaccaactccggcaacc 78
               ||||||| ||||||||||||||||||
Sbjct: 2171596 cgccttcgccaccaactccggcaacc 2171621
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>gb|BT009544.1| Triticum aestivum clone wr1.pk148.a5:fis, full insert mRNA sequence
          Length = 1018

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 126 cggccgatccacgcgggcggcgaccctccgtagccatg 163
           |||| |||| ||||||||||||||| ||| ||||||||
Sbjct: 148 cggcagatctacgcgggcggcgaccgtccctagccatg 185
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>gb|AC091331.14| Mus musculus chromosome 1, clone RP23-293F4, complete sequence
          Length = 236163

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 399    atgaactagaaaatattcttg 419
              |||||||||||||||||||||
Sbjct: 119284 atgaactagaaaatattcttg 119304
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>ref|NM_014686.2| Homo sapiens KIAA0355 (KIAA0355), mRNA
          Length = 6639

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 408 aaaatattcttgcaaagaagt 428
           |||||||||||||||||||||
Sbjct: 474 aaaatattcttgcaaagaagt 494
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>gb|BC017790.2| Homo sapiens KIAA0355, mRNA (cDNA clone IMAGE:4616699), partial cds
          Length = 1153

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 408 aaaatattcttgcaaagaagt 428
           |||||||||||||||||||||
Sbjct: 473 aaaatattcttgcaaagaagt 493
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>gb|AY388625.1| Plodia interpunctella cyclin A mRNA, partial cds
          Length = 899

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 19  cacacctccaccagccagtcg 39
           |||||||||||||||||||||
Sbjct: 749 cacacctccaccagccagtcg 729
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>emb|CR686106.2|CNS0FSCM Tetraodon nigroviridis full-length cDNA
          Length = 876

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 228 agaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtgga 276
           |||||||| | | ||||| ||| ||||| |||||||| |||||||||||
Sbjct: 57  agaatttctcctcccaagtggtggagagacacaacaagccggaggtgga 105
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>emb|CR857584.1| Pongo pygmaeus mRNA; cDNA DKFZp469A1915 (from clone DKFZp469A1915)
          Length = 5021

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 408 aaaatattcttgcaaagaagt 428
           |||||||||||||||||||||
Sbjct: 509 aaaatattcttgcaaagaagt 529
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>gb|AC092080.2| Homo sapiens chromosome 19 clone CTD-2094A2, complete sequence
          Length = 64056

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 408   aaaatattcttgcaaagaagt 428
             |||||||||||||||||||||
Sbjct: 22773 aaaatattcttgcaaagaagt 22793
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>gb|AC010614.8| Homo sapiens chromosome 19 clone CTD-2518G19, complete sequence
          Length = 158595

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 408    aaaatattcttgcaaagaagt 428
              |||||||||||||||||||||
Sbjct: 157794 aaaatattcttgcaaagaagt 157814
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>gb|AC154331.1| Mus musculus BAC clone RP23-256F11 from chromosome 13, complete sequence
          Length = 175414

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 397    agatgaactagaaaatattct 417
              |||||||||||||||||||||
Sbjct: 162326 agatgaactagaaaatattct 162346
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>gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome 13, complete sequence
          Length = 204294

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 397    agatgaactagaaaatattct 417
              |||||||||||||||||||||
Sbjct: 185206 agatgaactagaaaatattct 185186
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>dbj|AB002353.1| Homo sapiens mRNA for KIAA0355 gene, partial cds
          Length = 6657

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 408 aaaatattcttgcaaagaagt 428
           |||||||||||||||||||||
Sbjct: 514 aaaatattcttgcaaagaagt 534
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>emb|Z95704.1|HS4PTEL Human DNA sequence from 4PTEL, Huntington's Disease Region, chromosome
             4p16.3
          Length = 118767

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 406   agaaaatattcttgcaaagaagttc 430
             ||||||||||||| |||||||||||
Sbjct: 39640 agaaaatattcttccaaagaagttc 39616
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>emb|CT010488.9| Mouse DNA sequence from clone RP23-133A3 on chromosome 9, complete
              sequence
          Length = 219139

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 405    tagaaaatattcttgcaaagaagt 428
              ||||||||||||||||||| ||||
Sbjct: 144823 tagaaaatattcttgcaaataagt 144800
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>gb|AC123817.4| Mus musculus BAC clone RP24-255D13 from chromosome 9, complete sequence
          Length = 169614

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 391   gcaggcagatgaactagaaaatat 414
             ||||||| ||||||||||||||||
Sbjct: 40602 gcaggcaaatgaactagaaaatat 40579
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>gb|AC113527.8| Mus musculus chromosome 9, clone RP23-314E23, complete sequence
          Length = 202544

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 391  gcaggcagatgaactagaaaatat 414
            ||||||| ||||||||||||||||
Sbjct: 8784 gcaggcaaatgaactagaaaatat 8807
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>emb|BX942818.8| Zebrafish DNA sequence from clone CH211-285L17 in linkage group 22,
             complete sequence
          Length = 88764

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   cagatgaactagaaaatatt 415
             ||||||||||||||||||||
Sbjct: 70323 cagatgaactagaaaatatt 70304
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>gb|AY113475.1| Drosophila melanogaster RE43724 full insert cDNA
          Length = 722

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 218 atgtgcctgcagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggag 277
           |||||||||||| | ||||| |  || | ||| ||| |||||||||| ||||||||||||
Sbjct: 169 atgtgcctgcaggacttcccctcgcaggtggtggagcggcacaacaagccggaggtggag 228
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>ref|NM_135152.2| Drosophila melanogaster Arc-p20 CG5972-RA (Arc-p20), mRNA
          Length = 708

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 218 atgtgcctgcagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggag 277
           |||||||||||| | ||||| |  || | ||| ||| |||||||||| ||||||||||||
Sbjct: 169 atgtgcctgcaggacttcccctcgcaggtggtggagcggcacaacaagccggaggtggag 228
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>dbj|AK139643.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
            clone:B020007M09 product:unclassifiable, full insert
            sequence
          Length = 1483

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 391  gcaggcagatgaactagaaaatat 414
            ||||||| ||||||||||||||||
Sbjct: 1361 gcaggcaaatgaactagaaaatat 1384
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>gb|AC093900.3| Homo sapiens BAC clone RP11-730E1 from 4, complete sequence
          Length = 152581

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    cacatcccttctcttcccct 125
              ||||||||||||||||||||
Sbjct: 101867 cacatcccttctcttcccct 101848
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>gb|AF325155.1|AF325155 Spodoptera litura nucleopolyhedrovirus strain G2, complete genome
          Length = 139342

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    tcgcctccgacgccggcgcc 56
             ||||||||||||||||||||
Sbjct: 92215 tcgcctccgacgccggcgcc 92196
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>gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, region 25F-26A, BAC clone
             BACR10M11, complete sequence
          Length = 174832

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                         
Query: 218   atgtgcctgcagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggag 277
             |||||||||||| | ||||| |  || | ||| ||| |||||||||| ||||||||||||
Sbjct: 25111 atgtgcctgcaggacttcccctcgcaggtggtggagcggcacaacaagccggaggtggag 25052
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    ccgacgccggcgccttcccc 62
             ||||||||||||||||||||
Sbjct: 68697 ccgacgccggcgccttcccc 68678
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>gb|AC154440.2| Mus musculus BAC clone RP24-175D9 from 9, complete sequence
          Length = 162520

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 405   tagaaaatattcttgcaaagaagt 428
             ||||||||||||||||||| ||||
Sbjct: 26043 tagaaaatattcttgcaaataagt 26066
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>gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21 of 83 of the complete
              sequence
          Length = 260673

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                          
Query: 218    atgtgcctgcagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggag 277
              |||||||||||| | ||||| |  || | ||| ||| |||||||||| ||||||||||||
Sbjct: 168968 atgtgcctgcaggacttcccctcgcaggtggtggagcggcacaacaagccggaggtggag 169027
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>gb|AC004639.1|AC004639 Drosophila melanogaster DNA sequence (P1 DS06863 (D124)), complete
             sequence
          Length = 78419

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                         
Query: 218   atgtgcctgcagaatttcccttgccaagaggtcgagaggcacaacaaaccggaggtggag 277
             |||||||||||| | ||||| |  || | ||| ||| |||||||||| ||||||||||||
Sbjct: 42969 atgtgcctgcaggacttcccctcgcaggtggtggagcggcacaacaagccggaggtggag 42910
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>emb|AL669982.10| Mouse DNA sequence from clone RP23-297N24 on chromosome 4, complete
             sequence
          Length = 240125

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   aagttccttaggtttttgtc 444
             ||||||||||||||||||||
Sbjct: 63024 aagttccttaggtttttgtc 63043


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,824,001
Number of Sequences: 3902068
Number of extensions: 3824001
Number of successful extensions: 89483
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89339
Number of HSP's gapped (non-prelim): 143
length of query: 476
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 454
effective length of database: 17,147,199,772
effective search space: 7784828696488
effective search space used: 7784828696488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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