ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet19e03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ224681.1|TAAJ4681 Triticum aestivum mRNA for beta-fructosidase, partial CDS Length = 750 Score = 307 bits (155), Expect = 1e-80 Identities = 269/307 (87%) Strand = Plus / Plus Query: 9 tatgagcttgtccccgggttgcttcaccgtgtaccggggacgggcatgtgggagtgcatc 68 |||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||| Sbjct: 439 tatgagcttgtccccgggttgcttcaccgtttgccggggacgggtatgtgggagtgcatt 498 Query: 69 gatttatacccggttggcggtgcaaggggcatcgatatgacagaggcagtggcggccgcg 128 ||||| |||||||| || ||| ||||||||| || |||||||||| |||||| || ||| Sbjct: 499 gatttgtacccggtcggtggtaaaaggggcattgacatgacagaggtagtggcagcggcg 558 Query: 129 tccatgaatgcgggcgacggtgttttgcacgtgatgaaggagagctcggacgatgaccgg 188 |||| |||| || |||| ||| ||||||||||||||||||||||| |||||||||||| Sbjct: 559 tccaccaatggcggtgacgatgtgttgcacgtgatgaaggagagctctgacgatgaccgg 618 Query: 189 cacgactactatgcgttggggcaatacgacgcggcaaagaacatgtggaccccactggac 248 ||||||||||||||||||||| || |||||||||||||||| ||||| ||| ||||| Sbjct: 619 cacgactactatgcgttggggaggtatgacgcggcaaagaacacatggacgccattggac 678 Query: 249 accgacgccgatgttggtgtcgggctgaggtatgactggggaaagttctacgcgtctaag 308 |||| |||||||| || | |||||||||||||||||||||||||||||||| |||||| Sbjct: 679 gccgatgccgatgtcggcattgggctgaggtatgactggggaaagttctacgcatctaag 738 Query: 309 acgttct 315 || |||| Sbjct: 739 actttct 745
>emb|AJ623275.1| Hordeum vulgare mRNA for soluble acid invertase (sai gene) Length = 2038 Score = 264 bits (133), Expect = 2e-67 Identities = 280/329 (85%) Strand = Plus / Plus Query: 9 tatgagcttgtccccgggttgcttcaccgtgtaccggggacgggcatgtgggagtgcatc 68 |||||||||||||| |||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 947 tatgagcttgtccctgggttgcttcaccgggtgccggggacggggatgtgggagtgcatc 1006 Query: 69 gatttatacccggttggcggtgcaaggggcatcgatatgacagaggcagtggcggccgcg 128 || |||||||||| || || | ||||||||||| ||||| || || ||| |||| || Sbjct: 1007 gacctatacccggtcggaggcgtgaggggcatcgacatgacggacgcggtgacggcagct 1066 Query: 129 tccatgaatgcgggcgacggtgttttgcacgtgatgaaggagagctcggacgatgaccgg 188 |||| |||| || |||| ||| ||||||||||||||||||||||| ||||||||||| Sbjct: 1067 tccaacaatggcggtgacgatgtgttgcacgtgatgaaggagagctctgacgatgaccga 1126 Query: 189 cacgactactatgcgttggggcaatacgacgcggcaaagaacatgtggaccccactggac 248 ||||||||||||||||||||| || |||||| | ||||||| ||||| || |||||| Sbjct: 1127 cacgactactatgcgttggggaggtatgacgcgaccaagaacacatggacgccgctggac 1186 Query: 249 accgacgccgatgttggtgtcgggctgaggtatgactggggaaagttctacgcgtctaag 308 |||||||||| | || ||||||||||||| |||||||||||||||||||| || ||| Sbjct: 1187 gtcgacgccgatctcggcatcgggctgaggtacgactggggaaagttctacgcatccaag 1246 Query: 309 acgttctatgatccagcaaagaagcggcg 337 || ||||||||||| ||||||||| |||| Sbjct: 1247 accttctatgatccggcaaagaagaggcg 1275
>emb|AJ635225.1| Triticum aestivum mRNA for acid beta-fructofuranosidase precursor (inv1 gene) Length = 2250 Score = 228 bits (115), Expect = 9e-57 Identities = 286/343 (83%) Strand = Plus / Plus Query: 1 tcatcgattatgagcttgtccccgggttgcttcaccgtgtaccggggacgggcatgtggg 60 ||||||| || ||||||||||| || ||||||||||||| || ||||| |||||||||| Sbjct: 955 tcatcgactacgagcttgtccctggcctgcttcaccgtgtgccagggactggcatgtggg 1014 Query: 61 agtgcatcgatttatacccggttggcggtgcaaggggcatcgatatgacagaggcagtgg 120 ||||||||||||| |||||||| ||||| ||||||||||| ||||| |||||||||| Sbjct: 1015 agtgcatcgatttgtacccggtcggcggcctgaggggcatcgacatgacggaggcagtgg 1074 Query: 121 cggccgcgtccatgaatgcgggcgacggtgttttgcacgtgatgaaggagagctcggacg 180 | || ||||||| || | |||| | |||||||||||| |||||||||||||| || | Sbjct: 1075 ctgcggcgtccaacaacggcggcggtgatgttttgcacgttatgaaggagagctccgatg 1134 Query: 181 atgaccggcacgactactatgcgttggggcaatacgacgcggcaaagaacatgtggaccc 240 ||||||| || |||||||| ||| |||| ||||||||||| ||||||| ||||| | Sbjct: 1135 atgaccgacatgactactacgcgctgggaaggtacgacgcggcgaagaacacatggacgc 1194 Query: 241 cactggacaccgacgccgatgttggtgtcgggctgaggtatgactggggaaagttctacg 300 | |||||| |||| |||||||| || | ||| ||||||| || |||||||||||||||| Sbjct: 1195 cgctggactccgatgccgatgtcggcattgggttgaggtacgattggggaaagttctacg 1254 Query: 301 cgtctaagacgttctatgatccagcaaagaagcggcgggtgct 343 |||| ||||| ||||| |||||| |||||||||| || ||||| Sbjct: 1255 cgtccaagacattctacgatccatcaaagaagcgacgcgtgct 1297
>emb|AJ532549.1|LTE532549 Lolium temulentum mRNA for putative soluble acid invertase (inv1:4 gene) Length = 2407 Score = 135 bits (68), Expect = 1e-28 Identities = 230/284 (80%) Strand = Plus / Plus Query: 54 atgtgggagtgcatcgatttatacccggttggcggtgcaaggggcatcgatatgacagag 113 ||||||||||||||||| || |||||||| |||| |||||||||||||| ||||| ||| Sbjct: 1112 atgtgggagtgcatcgacttgtacccggtcggcgccgcaaggggcatcgacatgacggag 1171 Query: 114 gcagtggcggccgcgtccatgaatgcgggcgacggtgttttgcacgtgatgaaggagagc 173 || || ||||| || |||| || | |||| | |||||||| || |||||||||||| Sbjct: 1172 gccgtcgcggcggcatccaacaacggcggcggtgaagttttgcatgtcatgaaggagagc 1231 Query: 174 tcggacgatgaccggcacgactactatgcgttggggcaatacgacgcggcaaagaacatg 233 || ||||| ||||| || |||||||| ||| | ||| ||||| || |||| |||| | Sbjct: 1232 tcagacgacgaccgacatgactactacgcgctagggaggtacgatgcagcaacaaacaag 1291 Query: 234 tggaccccactggacaccgacgccgatgttggtgtcgggctgaggtatgactggggaaag 293 ||||| || || || ||||||| ||||| || ||||||||||||| || ||||||||| Sbjct: 1292 tggacgccgctagatgccgacgctgatgtcggcatcgggctgaggtacgattggggaaag 1351 Query: 294 ttctacgcgtctaagacgttctatgatccagcaaagaagcggcg 337 |||||||| || ||||| |||||||| ||||| |||||| |||| Sbjct: 1352 ttctacgcatccaagaccttctatgacccagccaagaagaggcg 1395
>gb|AY082350.1| Lolium perenne fructosyltransferase (FT2) mRNA, complete cds Length = 2337 Score = 103 bits (52), Expect = 4e-19 Identities = 160/196 (81%) Strand = Plus / Plus Query: 150 gttttgcacgtgatgaaggagagctcggacgatgaccggcacgactactatgcgttgggg 209 |||||||| || |||||||||||||| ||||| ||||| || |||||||| ||| | ||| Sbjct: 1140 gttttgcatgtcatgaaggagagctcagacgacgaccgacatgactactacgcgctaggg 1199 Query: 210 caatacgacgcggcaaagaacatgtggaccccactggacaccgacgccgatgttggtgtc 269 ||||| || || | |||| |||||| || || || ||||||||||||| || || Sbjct: 1200 aggtacgatgcagcgacaaacaagtggacaccgctagatgccgacgccgatgtcggcatc 1259 Query: 270 gggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagcaaag 329 ||||||||||| || ||||||||||||||||| || ||||| |||||||| || || ||| Sbjct: 1260 gggctgaggtacgattggggaaagttctacgcatccaagaccttctatgacccggccaag 1319 Query: 330 aagcggcgggtgctat 345 ||| |||| ||||||| Sbjct: 1320 aagaggcgtgtgctat 1335 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 6 gattatgagcttgtccccgggttgcttcaccgtgtaccggggacgggcatgtgggagtgc 65 |||| |||||| || ||||| |||| ||||| || |||| |||||| |||||||||||| Sbjct: 996 gattttgagctcgttcccggagtgctgcaccgggtgccggcgacggggatgtgggagtgc 1055 Query: 66 atcgatttatacccggttggcggtgcaaggggcatcgatatgacagaggcagtggcggc 124 |||||||| |||||||||||||| || |||||||| || ||||| ||||| || ||||| Sbjct: 1056 atcgatttgtacccggttggcggcgcgaggggcattgacatgacggaggccgttgcggc 1114
>gb|AF069309.1| Triticum aestivum vacuolar invertase (WIVRV) mRNA, partial cds Length = 1840 Score = 71.9 bits (36), Expect = 1e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatga 319 ||||||||||||| |||||||| |||||||||||||| ||||| |||||||| Sbjct: 626 tcgggctgaggtacgactggggcaagttctacgcgtccaagaccttctatga 677 Score = 44.1 bits (22), Expect = 0.29 Identities = 34/38 (89%) Strand = Plus / Plus Query: 51 ggcatgtgggagtgcatcgatttatacccggttggcgg 88 |||||||||||||||||||| || ||||| || ||||| Sbjct: 454 ggcatgtgggagtgcatcgacttctaccccgtcggcgg 491
>emb|AJ532551.1|LTE532551 Lolium temulentum partial mRNA for putative soluble acid invertase (inv1:2 gene) Length = 1998 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagcaa 327 ||||||||||||| |||||||| |||||||||||||| ||||| ||||| || || || | Sbjct: 774 tcgggctgaggtacgactggggcaagttctacgcgtccaagaccttctacgacccggcca 833 Query: 328 agaagcggcgggtgct 343 || ||||||| ||||| Sbjct: 834 agcagcggcgcgtgct 849 Score = 46.1 bits (23), Expect = 0.074 Identities = 32/35 (91%) Strand = Plus / Plus Query: 51 ggcatgtgggagtgcatcgatttatacccggttgg 85 |||||||||||||||||||| || ||||| ||||| Sbjct: 602 ggcatgtgggagtgcatcgacttctaccccgttgg 636
>gb|AY575717.1| Triticum monococcum vacuolar invertase1 (vin1) mRNA, complete cds Length = 2414 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgcgtctaagacgttcta 316 ||||||||||||| |||||||| |||||||||||||| ||||| ||||| Sbjct: 1176 tcgggctgaggtacgactggggcaagttctacgcgtccaagaccttcta 1224 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 51 ggcatgtgggagtgcatcgatttataccc 79 |||||||||||||||||||| || ||||| Sbjct: 1004 ggcatgtgggagtgcatcgacttctaccc 1032
>gb|BT009003.1| Triticum aestivum clone wdk2c.pk017.f14:fis, full insert mRNA sequence Length = 1612 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagcaa 327 |||||||||| || |||||||| ||||| || ||||| | ||||||||||||| |||| Sbjct: 572 tcgggctgagatacgactggggtaagttttatgcgtccacctcgttctatgatccggcaa 631 Query: 328 agaagcggcgggtgct 343 |||||||||| ||||| Sbjct: 632 agaagcggcgcgtgct 647 Score = 46.1 bits (23), Expect = 0.074 Identities = 41/47 (87%) Strand = Plus / Plus Query: 153 ttgcacgtgatgaaggagagctcggacgatgaccggcacgactacta 199 ||||||||| |||||| |||| |||||| || |||||||||||||| Sbjct: 457 ttgcacgtgttgaaggcgagcatggacgacgaacggcacgactacta 503
>gb|DQ267825.1| Dendrocalamopsis oldhamii vacuolar invertase BObetaFRUCT3 mRNA, complete cds Length = 2155 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 154 tgcacgtgatgaaggagagctcggacgatgaccggcacgactactatgcgttggg 208 ||||||||||||||| |||| |||||| ||||||||||||||||| ||| |||| Sbjct: 1040 tgcacgtgatgaaggcgagcatggacgacgaccggcacgactactacgcgctggg 1094 Score = 48.1 bits (24), Expect = 0.019 Identities = 57/68 (83%) Strand = Plus / Plus Query: 12 gagcttgtccccgggttgcttcaccgtgtaccggggacgggcatgtgggagtgcatcgat 71 ||||| ||||| ||| |||| ||||| || |||| || |||||||||||||||||||| Sbjct: 898 gagctcgtcccggggctgctgcaccgcgtcccggccaccggcatgtgggagtgcatcgac 957 Query: 72 ttataccc 79 || ||||| Sbjct: 958 ttctaccc 965
>gb|AF481763.1| Lolium perenne fructosyltransferase (FT1) mRNA, complete cds Length = 2386 Score = 60.0 bits (30), Expect = 5e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 274 tgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagcaaagaagc 333 |||||||||||||||| |||||||||||| | ||||| ||||| || || || ||||| | Sbjct: 1168 tgaggtatgactggggcaagttctacgcgaccaagactttctacgacccggccaagaatc 1227 Query: 334 ggcgggtgct 343 |||| ||||| Sbjct: 1228 ggcgcgtgct 1237 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 51 ggcatgtgggagtgcatcgatttataccc 79 |||||||||||||||||||| || ||||| Sbjct: 990 ggcatgtgggagtgcatcgacttctaccc 1018
>emb|AJ006067.1|ACE6067 Allium cepa mRNA for invertase Length = 2438 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatc 321 |||||||||||||||||||||||||||| || || || ||||| ||||| |||| Sbjct: 1294 tcgggctgaggtatgactggggaaagttttatgcttccaagactttctacgatc 1347 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 ggacgatgaccggcacgactacta 199 |||||||||| ||||||||||||| Sbjct: 1202 ggacgatgacaggcacgactacta 1225
>gb|AY302083.1| Saccharum hybrid cultivar soluble acid invertase (ShinvA) mRNA, partial cds Length = 2274 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 277 ggtatgactggggaaagttctacgcgtctaagacgttcta 316 |||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1097 ggtacgactggggcaagttctacgcgtccaagacgttcta 1136 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 43 cggggacgggcatgtgggagtgcatcgatttataccc 79 |||||||||| ||||||||||||||||| || ||||| Sbjct: 851 cggggacggggatgtgggagtgcatcgacttctaccc 887
>gb|BT008969.1| Triticum aestivum clone wdk1c.pk014.c11:fis, full insert mRNA sequence Length = 1844 Score = 56.0 bits (28), Expect = 8e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagcaa 327 ||||||||||||| || ||||| ||||| || ||||| | ||||||||||||| || | Sbjct: 646 tcgggctgaggtacgattggggtaagttttatgcgtccacctcgttctatgatccggcga 705 Query: 328 agaagcggcgggtgct 343 |||||||||| ||||| Sbjct: 706 agaagcggcgcgtgct 721 Score = 46.1 bits (23), Expect = 0.074 Identities = 41/47 (87%) Strand = Plus / Plus Query: 153 ttgcacgtgatgaaggagagctcggacgatgaccggcacgactacta 199 ||||||||| |||||| |||| ||||||||| || ||||||||||| Sbjct: 531 ttgcacgtgttgaaggcgagcatggacgatgaacgacacgactacta 577
>gb|AF252607.1| Psathyrostachys juncea sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, partial cds Length = 1315 Score = 56.0 bits (28), Expect = 8e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagcaa 327 |||||||||| || |||||||| ||||| || ||||| | || ||||||||||| || | Sbjct: 121 tcgggctgagatacgactggggtaagttttatgcgtccaccacattctatgatccggcga 180 Query: 328 agaagcggcgggtgct 343 |||||||||| ||||| Sbjct: 181 agaagcggcgcgtgct 196 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 154 tgcacgtgatgaaggagagctcggacgatgaccggcacgactacta 199 |||||||| |||||| |||| ||||||||| |||||||||||||| Sbjct: 7 tgcacgtgttgaaggcgagcatggacgatgaacggcacgactacta 52
>gb|AF211253.1| Agropyron cristatum sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, complete cds Length = 2174 Score = 56.0 bits (28), Expect = 8e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagcaa 327 ||||||||||||| |||||||| ||||| || ||||| | ||||||||||||| || | Sbjct: 1092 tcgggctgaggtacgactggggtaagttttatgcgtccacctcgttctatgatccggcga 1151 Query: 328 agaagcggcgggtgct 343 ||||||| || ||||| Sbjct: 1152 agaagcgacgcgtgct 1167
>dbj|AB029887.1| Triticum aestivum 6-SFT mRNA for sucrose:fructan 6-fructosyltransferase, complete cds Length = 2220 Score = 56.0 bits (28), Expect = 8e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagcaa 327 ||||| |||| || |||||||| |||||||||||||| | ||||||||||||| || | Sbjct: 1051 tcgggttgagatacgactggggtaagttctacgcgtccacctcgttctatgatccggcga 1110 Query: 328 agaagcggcgggtgct 343 ||||||| || ||||| Sbjct: 1111 agaagcgacgcgtgct 1126
>gb|AF083856.1|AF083856 Saccharum hybrid cultivar H65-7052 soluble acid invertase (scinvh3'2) mRNA, partial cds Length = 1402 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 277 ggtatgactggggaaagttctacgcgtctaagacgttcta 316 |||| |||||||| |||||||||||||| ||||||||||| Sbjct: 205 ggtacgactggggcaagttctacgcgtccaagacgttcta 244
>gb|DQ073970.1| Lolium perenne fructosyltransferase-like protein mRNA, complete cds Length = 1962 Score = 56.0 bits (28), Expect = 8e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagcaa 327 ||||||||||||| |||||||||| ||| | ||||| || |||||||||||||| || | Sbjct: 1151 tcgggctgaggtacgactggggaaggttttttgcgtccaaaacgttctatgatccggcga 1210 Query: 328 agaagcggcgggtgct 343 || |||||| ||||| Sbjct: 1211 agcggcggcgcgtgct 1226 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 157 acgtgatgaaggagagctcggacgatgaccggcacgactactatgcgttgggg 209 |||||||||||| |||| |||||| |||||||||||| ||| || |||||| Sbjct: 1040 acgtgatgaaggcgagcatggacgaccaccggcacgactgctacgcattgggg 1092
>gb|AF062735.1|AF062735 Saccharum officinarum soluble acid invertase mRNA, partial cds Length = 1808 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 277 ggtatgactggggaaagttctacgcgtctaagacgttcta 316 |||| |||||||| |||||||||||||| ||||||||||| Sbjct: 878 ggtacgactggggcaagttctacgcgtccaagacgttcta 917 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 43 cggggacgggcatgtgggagtgcatcgatttataccc 79 |||||||||| ||||||||||||||||| || ||||| Sbjct: 632 cggggacggggatgtgggagtgcatcgacttctaccc 668
>gb|AF062734.1|AF062734 Saccharum robustum soluble acid invertase mRNA, partial cds Length = 1808 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 277 ggtatgactggggaaagttctacgcgtctaagacgttcta 316 |||| |||||||| |||||||||||||| ||||||||||| Sbjct: 878 ggtacgactggggcaagttctacgcgtccaagacgttcta 917 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 43 cggggacgggcatgtgggagtgcatcgatttataccc 79 |||||||||| ||||||||||||||||| || ||||| Sbjct: 632 cggggacggggatgtgggagtgcatcgacttctaccc 668
>emb|AJ563384.1|ZMA563384 Zea mays partial ivr2 gene for vacuolar invertase, exons 1-2 Length = 1978 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 282 gactggggaaagttctacgcgtctaagacgttcta 316 |||||||| |||||||||||||| ||||||||||| Sbjct: 645 gactggggcaagttctacgcgtccaagacgttcta 679 Score = 44.1 bits (22), Expect = 0.29 Identities = 58/70 (82%) Strand = Plus / Plus Query: 154 tgcacgtgatgaaggagagctcggacgatgaccggcacgactactatgcgttggggcaat 213 ||||||| ||||||| ||| |||||| ||||| ||||||||||| ||| ||||| | Sbjct: 517 tgcacgtcatgaaggccagcatggacgacgaccgccacgactactacgcgctggggaggt 576 Query: 214 acgacgcggc 223 |||||||||| Sbjct: 577 acgacgcggc 586 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 51 ggcatgtgggagtgcatcgatttataccc 79 |||||||||||||||||||| || ||||| Sbjct: 402 ggcatgtgggagtgcatcgacttctaccc 430
>gb|AY107166.1| Zea mays PCO109921 mRNA sequence Length = 1901 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 282 gactggggaaagttctacgcgtctaagacgttcta 316 |||||||| |||||||||||||| ||||||||||| Sbjct: 714 gactggggcaagttctacgcgtccaagacgttcta 748 Score = 44.1 bits (22), Expect = 0.29 Identities = 58/70 (82%) Strand = Plus / Plus Query: 154 tgcacgtgatgaaggagagctcggacgatgaccggcacgactactatgcgttggggcaat 213 ||||||| ||||||| ||| |||||| ||||| ||||||||||| ||| ||||| | Sbjct: 586 tgcacgtcatgaaggccagcatggacgacgaccgccacgactactacgcgctggggaggt 645 Query: 214 acgacgcggc 223 |||||||||| Sbjct: 646 acgacgcggc 655 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 51 ggcatgtgggagtgcatcgatttataccc 79 |||||||||||||||||||| || ||||| Sbjct: 471 ggcatgtgggagtgcatcgacttctaccc 499
>gb|U31451.1|ZMU31451 Zea mays invertase mRNA, partial cds Length = 1530 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 282 gactggggaaagttctacgcgtctaagacgttcta 316 |||||||| |||||||||||||| ||||||||||| Sbjct: 700 gactggggcaagttctacgcgtccaagacgttcta 734 Score = 44.1 bits (22), Expect = 0.29 Identities = 58/70 (82%) Strand = Plus / Plus Query: 154 tgcacgtgatgaaggagagctcggacgatgaccggcacgactactatgcgttggggcaat 213 ||||||| ||||||| ||| |||||| ||||| ||||||||||| ||| ||||| | Sbjct: 572 tgcacgtcatgaaggccagcatggacgacgaccgccacgactactacgcgctggggaggt 631 Query: 214 acgacgcggc 223 |||||||||| Sbjct: 632 acgacgcggc 641 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 51 ggcatgtgggagtgcatcgatttataccc 79 |||||||||||||||||||| || ||||| Sbjct: 457 ggcatgtgggagtgcatcgacttctaccc 485
>gb|AF192394.1|AF192394 Poa secunda sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, complete cds Length = 2057 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 270 gggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatcca 323 ||||| ||||| |||||||| |||||||| ||||| | | |||||||||||||| Sbjct: 1075 gggcttaggtacgactggggcaagttctatgcgtccacgtcgttctatgatcca 1128 Score = 46.1 bits (23), Expect = 0.074 Identities = 53/63 (84%) Strand = Plus / Plus Query: 186 cggcacgactactatgcgttggggcaatacgacgcggcaaagaacatgtggaccccactg 245 |||||||||||||| |||||||| |||||||||||| ||||| |||||| ||| || Sbjct: 991 cggcacgactactacgcgttgggcaggtacgacgcggcagggaacacgtggacaccattg 1050 Query: 246 gac 248 ||| Sbjct: 1051 gac 1053 Score = 44.1 bits (22), Expect = 0.29 Identities = 34/38 (89%) Strand = Plus / Plus Query: 51 ggcatgtgggagtgcatcgatttatacccggttggcgg 88 ||||||||||||||||| || || ||||| |||||||| Sbjct: 895 ggcatgtgggagtgcatggacttctaccccgttggcgg 932
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.005 Identities = 133/169 (78%) Strand = Plus / Plus Query: 154 tgcacgtgatgaaggagagctcggacgatgaccggcacgactactatgcgttggggcaat 213 ||||||||||||||| |||| |||||| || || || |||||||| ||| ||||| | Sbjct: 344571 tgcacgtgatgaaggcgagcatggacgacgatcgccatgactactacgcgctggggaggt 344630 Query: 214 acgacgcggcaaagaacatgtggaccccactggacaccgacgccgatgttggtgtcgggc 273 ||||| |||| | |||| |||||| || |||||| ||| |||||| || || |||| | Sbjct: 344631 acgacccggcgaggaacgcgtggacgccgctggacgccgccgccgacgtcggcatcggcc 344690 Query: 274 tgaggtatgactggggaaagttctacgcgtctaagacgttctatgatcc 322 | | || |||||||| |||||||| || || ||||| ||||| ||||| Sbjct: 344691 tccgctacgactggggcaagttctatgcctccaagaccttctacgatcc 344739 Score = 46.1 bits (23), Expect = 0.074 Identities = 32/35 (91%) Strand = Plus / Plus Query: 48 acgggcatgtgggagtgcatcgatttatacccggt 82 ||||| ||||||||||||||||| || |||||||| Sbjct: 344477 acggggatgtgggagtgcatcgacttctacccggt 344511
>gb|AF276704.1|AF276704 Oryza sativa vacuolar acid invertase (INV3) gene, complete cds Length = 3725 Score = 50.1 bits (25), Expect = 0.005 Identities = 133/169 (78%) Strand = Plus / Plus Query: 154 tgcacgtgatgaaggagagctcggacgatgaccggcacgactactatgcgttggggcaat 213 ||||||||||||||| |||| |||||| || || || |||||||| ||| ||||| | Sbjct: 1623 tgcacgtgatgaaggcgagcatggacgacgatcgccatgactactacgcgctggggaggt 1682 Query: 214 acgacgcggcaaagaacatgtggaccccactggacaccgacgccgatgttggtgtcgggc 273 ||||| |||| | |||| |||||| || |||||| ||| |||||| || || |||| | Sbjct: 1683 acgacccggcgaggaacgcgtggacgccgctggacgccgccgccgacgtcggcatcggcc 1742 Query: 274 tgaggtatgactggggaaagttctacgcgtctaagacgttctatgatcc 322 | | || |||||||| |||||||| || || ||||| ||||| ||||| Sbjct: 1743 tccgctacgactggggcaagttctatgcctccaagaccttctacgatcc 1791 Score = 46.1 bits (23), Expect = 0.074 Identities = 32/35 (91%) Strand = Plus / Plus Query: 48 acgggcatgtgggagtgcatcgatttatacccggt 82 ||||| ||||||||||||||||| || |||||||| Sbjct: 1529 acggggatgtgggagtgcatcgacttctacccggt 1563
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 50.1 bits (25), Expect = 0.005 Identities = 133/169 (78%) Strand = Plus / Plus Query: 154 tgcacgtgatgaaggagagctcggacgatgaccggcacgactactatgcgttggggcaat 213 ||||||||||||||| |||| |||||| || || || |||||||| ||| ||||| | Sbjct: 73355 tgcacgtgatgaaggcgagcatggacgacgatcgccatgactactacgcgctggggaggt 73414 Query: 214 acgacgcggcaaagaacatgtggaccccactggacaccgacgccgatgttggtgtcgggc 273 ||||| |||| | |||| |||||| || |||||| ||| |||||| || || |||| | Sbjct: 73415 acgacccggcgaggaacgcgtggacgccgctggacgccgccgccgacgtcggcatcggcc 73474 Query: 274 tgaggtatgactggggaaagttctacgcgtctaagacgttctatgatcc 322 | | || |||||||| |||||||| || || ||||| ||||| ||||| Sbjct: 73475 tccgctacgactggggcaagttctatgcctccaagaccttctacgatcc 73523 Score = 46.1 bits (23), Expect = 0.074 Identities = 32/35 (91%) Strand = Plus / Plus Query: 48 acgggcatgtgggagtgcatcgatttatacccggt 82 ||||| ||||||||||||||||| || |||||||| Sbjct: 73261 acggggatgtgggagtgcatcgacttctacccggt 73295
>dbj|AK072245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002K22, full insert sequence Length = 2443 Score = 50.1 bits (25), Expect = 0.005 Identities = 133/169 (78%) Strand = Plus / Plus Query: 154 tgcacgtgatgaaggagagctcggacgatgaccggcacgactactatgcgttggggcaat 213 ||||||||||||||| |||| |||||| || || || |||||||| ||| ||||| | Sbjct: 1141 tgcacgtgatgaaggcgagcatggacgacgatcgccatgactactacgcgctggggaggt 1200 Query: 214 acgacgcggcaaagaacatgtggaccccactggacaccgacgccgatgttggtgtcgggc 273 ||||| |||| | |||| |||||| || |||||| ||| |||||| || || |||| | Sbjct: 1201 acgacccggcgaggaacgcgtggacgccgctggacgccgccgccgacgtcggcatcggcc 1260 Query: 274 tgaggtatgactggggaaagttctacgcgtctaagacgttctatgatcc 322 | | || |||||||| |||||||| || || ||||| ||||| ||||| Sbjct: 1261 tccgctacgactggggcaagttctatgcctccaagaccttctacgatcc 1309 Score = 46.1 bits (23), Expect = 0.074 Identities = 32/35 (91%) Strand = Plus / Plus Query: 48 acgggcatgtgggagtgcatcgatttatacccggt 82 ||||| ||||||||||||||||| || |||||||| Sbjct: 1047 acggggatgtgggagtgcatcgacttctacccggt 1081
>gb|AF252608.1| Pascopyrum smithii sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, partial cds Length = 1294 Score = 48.1 bits (24), Expect = 0.019 Identities = 63/76 (82%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagcaa 327 |||||||||| || |||||||| ||||| || ||||| | ||||||||||||| || | Sbjct: 121 tcgggctgagatacgactggggtaagttttatgcgtccacctcgttctatgatccggcga 180 Query: 328 agaagcggcgggtgct 343 ||||||| || ||||| Sbjct: 181 agaagcgacgcgtgct 196
>gb|AF494041.1| Lolium perenne fructan 6-fructosyltransferase mRNA, complete cds Length = 2279 Score = 48.1 bits (24), Expect = 0.019 Identities = 36/40 (90%) Strand = Plus / Plus Query: 51 ggcatgtgggagtgcatcgatttatacccggttggcggtg 90 |||||||||||||||||||| || ||||| ||||| |||| Sbjct: 936 ggcatgtgggagtgcatcgacttttaccccgttggaggtg 975 Score = 44.1 bits (22), Expect = 0.29 Identities = 46/54 (85%) Strand = Plus / Plus Query: 270 gggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatcca 323 ||||||||||| |||||||| ||| ||||||| || | | ||||||| |||||| Sbjct: 1116 gggctgaggtacgactggggcaagctctacgcttccacgtcgttctacgatcca 1169
>emb|AJ563423.1|ZMA563423 Zea mays partial ivr2b pseudogene Length = 7411 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 48 acgggcatgtgggagtgcatcgatttataccc 79 ||||||||||||||||||||||| || ||||| Sbjct: 5639 acgggcatgtgggagtgcatcgacttctaccc 5670
>gb|AF210723.1|AF210723 Hordeum vulgare variety Steptoe sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 527 Score = 48.1 bits (24), Expect = 0.019 Identities = 63/76 (82%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagcaa 327 |||||||||| || |||||||||||||| || ||||| | | ||||||||||| || | Sbjct: 121 tcgggctgagatacgactggggaaagttttatgcgtccacctccttctatgatccggcca 180 Query: 328 agaagcggcgggtgct 343 |||| ||||| ||||| Sbjct: 181 agaaccggcgcgtgct 196 Score = 44.1 bits (22), Expect = 0.29 Identities = 40/46 (86%) Strand = Plus / Plus Query: 154 tgcacgtgatgaaggagagctcggacgatgaccggcacgactacta 199 |||||||| |||||| |||| |||||| || |||||||||||||| Sbjct: 7 tgcacgtgttgaaggcgagcatggacgacgaacggcacgactacta 52
>gb|AF210722.1|AF210722 Hordeum vulgare variety Morex sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 547 Score = 48.1 bits (24), Expect = 0.019 Identities = 63/76 (82%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagcaa 327 |||||||||| || |||||||| ||||| || ||||| | | ||||||||||| || | Sbjct: 121 tcgggctgagatacgactggggtaagttttatgcgtccacctccttctatgatccggcca 180 Query: 328 agaagcggcgggtgct 343 |||||||||| ||||| Sbjct: 181 agaagcggcgcgtgct 196 Score = 44.1 bits (22), Expect = 0.29 Identities = 40/46 (86%) Strand = Plus / Plus Query: 154 tgcacgtgatgaaggagagctcggacgatgaccggcacgactacta 199 |||||||| |||||| |||| |||||| || |||||||||||||| Sbjct: 7 tgcacgtgttgaaggcgagcatggacgacgaacggcacgactacta 52
>dbj|AB186920.1| Lolium perenne mRNA for putative fructosyltransferase1, complete cds Length = 2268 Score = 48.1 bits (24), Expect = 0.019 Identities = 36/40 (90%) Strand = Plus / Plus Query: 51 ggcatgtgggagtgcatcgatttatacccggttggcggtg 90 |||||||||||||||||||| || ||||| ||||| |||| Sbjct: 930 ggcatgtgggagtgcatcgacttttaccccgttggaggtg 969 Score = 44.1 bits (22), Expect = 0.29 Identities = 46/54 (85%) Strand = Plus / Plus Query: 270 gggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatcca 323 ||||||||||| |||||||| ||| ||||||| || | | ||||||| |||||| Sbjct: 1110 gggctgaggtacgactggggcaagctctacgcttccacgtcgttctacgatcca 1163
>emb|X83233.1|HVSF6FT Hordeum vulgare mRNA for sucrose:fructan 6-fructosyltransferase Length = 2091 Score = 48.1 bits (24), Expect = 0.019 Identities = 63/76 (82%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagcaa 327 |||||||||| || |||||||||||||| || ||||| | | ||||||||||| || | Sbjct: 1058 tcgggctgagatacgactggggaaagttttatgcgtccacctccttctatgatccggcca 1117 Query: 328 agaagcggcgggtgct 343 |||| ||||| ||||| Sbjct: 1118 agaaccggcgcgtgct 1133 Score = 44.1 bits (22), Expect = 0.29 Identities = 40/46 (86%) Strand = Plus / Plus Query: 154 tgcacgtgatgaaggagagctcggacgatgaccggcacgactacta 199 |||||||| |||||| |||| |||||| || |||||||||||||| Sbjct: 944 tgcacgtgttgaaggcgagcatggacgacgaacggcacgactacta 989
>dbj|AB159786.1| Triticum aestivum 1-SST gene for sucrose:sucrose 1-fructosyltransferase, complete cds Length = 3326 Score = 46.1 bits (23), Expect = 0.074 Identities = 59/71 (83%) Strand = Plus / Plus Query: 267 gtcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagca 326 ||||||||| |||| |||||||| |||| ||||||||| ||| | ||||| || || | Sbjct: 1451 gtcgggctgcggtacgactggggcaagtactacgcgtccaagtccttctacgaccccgtg 1510 Query: 327 aagaagcggcg 337 ||||||||||| Sbjct: 1511 aagaagcggcg 1521
>dbj|AB029888.1| Triticum aestivum 1-SST mRNA for sucrose:sucrose 1-fructosytransferase, complete cds Length = 2330 Score = 46.1 bits (23), Expect = 0.074 Identities = 59/71 (83%) Strand = Plus / Plus Query: 267 gtcgggctgaggtatgactggggaaagttctacgcgtctaagacgttctatgatccagca 326 ||||||||| |||| |||||||| |||| ||||||||| ||| | ||||| || || | Sbjct: 1199 gtcgggctgcggtacgactggggcaagtactacgcgtccaagtccttctacgaccccgtg 1258 Query: 327 aagaagcggcg 337 ||||||||||| Sbjct: 1259 aagaagcggcg 1269
>ref|XM_473317.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2001 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 291 aagttctacgcgtctaagacgttcta 316 |||||||||||||| ||||||||||| Sbjct: 1144 aagttctacgcgtccaagacgttcta 1169
>emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020O11, complete sequence Length = 113677 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 291 aagttctacgcgtctaagacgttcta 316 |||||||||||||| ||||||||||| Sbjct: 42769 aagttctacgcgtccaagacgttcta 42744
>emb|AJ532550.1|LTE532550 Lolium temulentum mRNA for putative fructan 6-fructosyltransferase (6ft gene) Length = 2331 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Plus Query: 268 tcgggctgaggtatgactggggaaagttctacgc 301 |||||||||| ||||||||||| ||| ||||||| Sbjct: 1120 tcgggctgagatatgactggggcaagctctacgc 1153 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 51 ggcatgtgggagtgcatcgatttataccc 79 |||||||||||||||||||| || ||||| Sbjct: 939 ggcatgtgggagtgcatcgacttttaccc 967
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 291 aagttctacgcgtctaagacgttcta 316 |||||||||||||| ||||||||||| Sbjct: 26740426 aagttctacgcgtccaagacgttcta 26740451
>gb|AF276703.1|AF276703 Oryza sativa vacuolar acid invertase (INV2) gene, complete cds Length = 7858 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 291 aagttctacgcgtctaagacgttcta 316 |||||||||||||| ||||||||||| Sbjct: 2565 aagttctacgcgtccaagacgttcta 2590
>dbj|AK099312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147H06, full insert sequence Length = 2243 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 291 aagttctacgcgtctaagacgttcta 316 |||||||||||||| ||||||||||| Sbjct: 1291 aagttctacgcgtccaagacgttcta 1316
>dbj|AK099126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042C22, full insert sequence Length = 1376 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 291 aagttctacgcgtctaagacgttcta 316 |||||||||||||| ||||||||||| Sbjct: 1227 aagttctacgcgtccaagacgttcta 1252
>dbj|AK065130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P13, full insert sequence Length = 2255 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 291 aagttctacgcgtctaagacgttcta 316 |||||||||||||| ||||||||||| Sbjct: 1290 aagttctacgcgtccaagacgttcta 1315
>gb|AC132595.3| Mus musculus BAC clone RP24-229G7 from chromosome 7, complete sequence Length = 155547 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 cgatgttggtgtcgggctgag 277 ||||||||||||||||||||| Sbjct: 28663 cgatgttggtgtcgggctgag 28683
>gb|AC148973.4| Mus musculus BAC clone RP24-117C3 from 7, complete sequence Length = 197165 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 cgatgttggtgtcgggctgag 277 ||||||||||||||||||||| Sbjct: 15729 cgatgttggtgtcgggctgag 15709
>gb|AF002656.1|AF002656 Asparagus officinalis acid invertase mRNA, complete cds Length = 2388 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 51 ggcatgtgggagtgcatcgatttataccc 79 |||||||||||||||||||| || ||||| Sbjct: 973 ggcatgtgggagtgcatcgacttctaccc 1001 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 155 gcacgtgatgaaggagagctcggacgatgaccggca 190 ||||||| ||||||||||||| ||||| ||| |||| Sbjct: 1071 gcacgtgctgaaggagagctccgacgacgacaggca 1106
>dbj|AB074885.1| Citrus unshiu CitINV1 mRNA for acid invertase, complete cds Length = 2373 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 293 gttctacgcgtctaagacgttctatgatc 321 |||||| ||||| |||||||||||||||| Sbjct: 1182 gttctatgcgtccaagacgttctatgatc 1210
>gb|AC007865.8| Trypanosoma brucei chromosome 2 clone RPCI93-30M24, complete sequence Length = 148533 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gttttgcacgtgatgaagga 169 |||||||||||||||||||| Sbjct: 41453 gttttgcacgtgatgaagga 41472
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gttttgcacgtgatgaagga 169 |||||||||||||||||||| Sbjct: 869789 gttttgcacgtgatgaagga 869770 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,664,985 Number of Sequences: 3902068 Number of extensions: 1664985 Number of successful extensions: 26885 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 26736 Number of HSP's gapped (non-prelim): 144 length of query: 345 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 323 effective length of database: 17,147,199,772 effective search space: 5538545526356 effective search space used: 5538545526356 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
