ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet18f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger prot... 118 8e-27
2ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing ... 39 0.006
3ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing ... 37 0.025
4ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing ... 36 0.055
5Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2... 34 0.16
6Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2... 34 0.16
7RABX5_HUMAN (Q9UJ41) Rab5 GDP/GTP exchange factor (Rabaptin 5-as... 32 0.61
8RABX5_BOVIN (O18973) Rab5 GDP/GTP exchange factor (Rabex-5) 32 0.61
9RABX5_MOUSE (Q9JM13) Rab5 GDP/GTP exchange factor (Rabex-5) 32 0.61

>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1|
           (Stress-associated protein 1) (OsISAP1)
          Length = 164

 Score =  118 bits (295), Expect = 8e-27
 Identities = 60/106 (56%), Positives = 60/106 (56%)
 Frame = +2

Query: 122 MAQRDKKDQEPTELRAPEITLCANSCGFPGNPATQNLCQNCFXXXXXXXXXXXXXXXXVL 301
           MAQRDKKDQEPTELRAPEITLCANSCGFPGNPATQNLCQNCF                VL
Sbjct: 1   MAQRDKKDQEPTELRAPEITLCANSCGFPGNPATQNLCQNCFLAATASTSSPSSLSSPVL 60

Query: 302 DKQPPRXXXXXXXXXXXXXXXXXXMXXXXXXXXXXXXKTSAVNRCS 439
           DKQPPR                  M            KTSAVNRCS
Sbjct: 61  DKQPPRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCS 106



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>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein|
           At2g36320
          Length = 161

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +2

Query: 182 LCANSCGFPGNPATQNLCQNCF 247
           LC N+CGF G+ AT NLC NC+
Sbjct: 15  LCVNNCGFFGSSATMNLCSNCY 36



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>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein|
           At4g12040
          Length = 175

 Score = 37.0 bits (84), Expect = 0.025
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 140 KDQEPTELRAPEITLCANSCGFPGNPATQNLCQNCF 247
           ++   T     E  LC N CGF G+P+  NLC  C+
Sbjct: 4   EENNSTSFPPTEPKLCDNGCGFFGSPSNMNLCSKCY 39



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>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein|
           At1g12440
          Length = 168

 Score = 35.8 bits (81), Expect = 0.055
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 140 KDQEPTELRAPEITLCANSCGFPGNPATQNLCQNCF 247
           +  + T     E  LC   CGF G+P+  NLC  C+
Sbjct: 4   EQNDSTSFSPSEPKLCVKGCGFFGSPSNMNLCSKCY 39



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>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger|
           protein 216)
          Length = 213

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 164 RAPEITLCANSCGFPGNPATQNLCQNCF 247
           + P   LC+  CGF GNP T  +C  C+
Sbjct: 7   QTPGPMLCSTGCGFYGNPRTNGMCSVCY 34



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>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger|
           protein 216)
          Length = 213

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 164 RAPEITLCANSCGFPGNPATQNLCQNCF 247
           + P   LC+  CGF GNP T  +C  C+
Sbjct: 7   QTPGPMLCSTGCGFYGNPRTNGMCSVCY 34



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>RABX5_HUMAN (Q9UJ41) Rab5 GDP/GTP exchange factor (Rabaptin 5-associated|
           exchange factor for Rab5) (Rabex-5)
          Length = 708

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 182 LCANSCGFPGNPATQNLCQNCF 247
           LC   CG+ GNPA Q  C  C+
Sbjct: 156 LCKKGCGYYGNPAWQGFCSKCW 177



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>RABX5_BOVIN (O18973) Rab5 GDP/GTP exchange factor (Rabex-5)|
          Length = 492

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 182 LCANSCGFPGNPATQNLCQNCF 247
           LC   CG+ GNPA Q  C  C+
Sbjct: 18  LCKKGCGYYGNPAWQGFCSKCW 39



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>RABX5_MOUSE (Q9JM13) Rab5 GDP/GTP exchange factor (Rabex-5)|
          Length = 491

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 182 LCANSCGFPGNPATQNLCQNCF 247
           LC   CG+ GNPA Q  C  C+
Sbjct: 18  LCKKGCGYYGNPAWQGFCSKCW 39


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,563,030
Number of Sequences: 219361
Number of extensions: 460246
Number of successful extensions: 1579
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1577
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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