| Clone Name | baet18d12 |
|---|---|
| Clone Library Name | barley_pub |
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 53.1 bits (126), Expect = 2e-07 Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 1/57 (1%) Frame = +3 Query: 36 AVYVFGDSLVDVSNNDYLPAPAPRANRPHGMDLP-GRPTGRFTNGYNLSDVISQRLG 203 AV+ FGDS+ D NN+ L RP+GMD P G TGRF+NG SD IS+ LG Sbjct: 125 AVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLG 181
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 47.8 bits (112), Expect = 8e-06 Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Frame = +3 Query: 36 AVYVFGDSLVDVSNNDYLPAPAPRANRPHGMDLPGR-PTGRFTNGYNLSDVISQRLG 203 AV+ FGDS+ D NN+ L RP+GMD R TGRF+NG SD +++ +G Sbjct: 204 AVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMG 260
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 37.0 bits (84), Expect = 0.014 Identities = 21/56 (37%), Positives = 29/56 (51%) Frame = +3 Query: 36 AVYVFGDSLVDVSNNDYLPAPAPRANRPHGMDLPGRPTGRFTNGYNLSDVISQRLG 203 A++ FGDS D L A +A PHG G P GR+ +G + D I++ LG Sbjct: 30 AIFNFGDSNSDTGG---LSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLG 82
>AROE_NEIPH (P95400) Shikimate dehydrogenase (EC 1.1.1.25)| Length = 269 Score = 31.6 bits (70), Expect = 0.58 Identities = 24/69 (34%), Positives = 33/69 (47%) Frame = +3 Query: 15 NGGRLANAVYVFGDSLVDVSNNDYLPAPAPRANRPHGMDLPGRPTGRFTNGYNLSDVISQ 194 NGGR AN F +S+ A A A + G+ G T+G L+D I++ Sbjct: 56 NGGRGANVTVPFKQEAFALSDEHSERALAAGAVNTLILLENGKIRGDNTDGLGLTDDIAK 115 Query: 195 RLGFEMSPK 221 RLG E+S K Sbjct: 116 RLGVEISDK 124
>AROE_NEIMU (P95389) Shikimate dehydrogenase (EC 1.1.1.25)| Length = 269 Score = 30.8 bits (68), Expect = 0.99 Identities = 24/69 (34%), Positives = 33/69 (47%) Frame = +3 Query: 15 NGGRLANAVYVFGDSLVDVSNNDYLPAPAPRANRPHGMDLPGRPTGRFTNGYNLSDVISQ 194 +GGR AN F +S+ A A A + G+ G T+G L+D IS+ Sbjct: 56 DGGRGANVTVPFKQEAFALSDEHSERALAAGAVNTLILLENGKIRGDNTDGIGLTDDISK 115 Query: 195 RLGFEMSPK 221 RLG E+S K Sbjct: 116 RLGVELSGK 124
>COBB_STRCO (Q9RJ16) Cobyrinic acid A,C-diamide synthase| Length = 486 Score = 28.5 bits (62), Expect = 4.9 Identities = 20/65 (30%), Positives = 30/65 (46%) Frame = +3 Query: 21 GRLANAVYVFGDSLVDVSNNDYLPAPAPRANRPHGMDLPGRPTGRFTNGYNLSDVISQRL 200 G L+ A + G++LV S LP P+P A P + PGRP + +G ++ Sbjct: 238 GALSCAAWDAGEALVS-SPPPPLPVPSPGAAPPDPLVRPGRPRPQAPDGLRRRVAMASGA 296 Query: 201 GFEMS 215 F S Sbjct: 297 AFTFS 301
>BUR1_CANGA (Q6FQ83) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 667 Score = 28.1 bits (61), Expect = 6.4 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +3 Query: 72 SNNDYLPAPAPRANRPHGMDLPGRPTGRFTNGYNLSDVISQRL 200 + N +P P P+ANR G LP P G N S + R+ Sbjct: 462 NQNPSVPHPQPKANRYGGSSLPSGPKYGRYEGNNHSGSLRNRI 504
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 27.7 bits (60), Expect = 8.4 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = +2 Query: 125 HGPPRQAHRPVHQRLQPLRRH 187 H PPR H P H+R P RH Sbjct: 155 HTPPRGQHPPSHRRPSPPSRH 175 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,115,634 Number of Sequences: 219361 Number of extensions: 376494 Number of successful extensions: 1239 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1192 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1236 length of database: 80,573,946 effective HSP length: 50 effective length of database: 69,605,896 effective search space used: 1670541504 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)