ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet18d12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 103 bits (52), Expect = 2e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 40 tgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccggcgccgg 99 |||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| Sbjct: 23332587 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgacttcctgccgccgccgg 23332528 Query: 100 cgcc 103 |||| Sbjct: 23332527 cgcc 23332524 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 150 ggccggttcaccaacggctacaacctctccgacgtcatc 188 ||||| ||||||||||||| ||||||| ||||||||||| Sbjct: 23332453 ggccgcttcaccaacggcttcaacctcgccgacgtcatc 23332415 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ttcggcgactcgctggtggac 68 ||||||||||||||||||||| Sbjct: 10070980 ttcggcgactcgctggtggac 10070960
>dbj|AK071697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108M03, full insert sequence Length = 1582 Score = 103 bits (52), Expect = 2e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 40 tgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccggcgccgg 99 |||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| Sbjct: 167 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgacttcctgccgccgccgg 226 Query: 100 cgcc 103 |||| Sbjct: 227 cgcc 230 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 150 ggccggttcaccaacggctacaacctctccgacgtcatc 188 ||||| ||||||||||||| ||||||| ||||||||||| Sbjct: 301 ggccgcttcaccaacggcttcaacctcgccgacgtcatc 339
>dbj|AK070277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050D08, full insert sequence Length = 1741 Score = 103 bits (52), Expect = 2e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 40 tgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccggcgccgg 99 |||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| Sbjct: 167 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgacttcctgccgccgccgg 226 Query: 100 cgcc 103 |||| Sbjct: 227 cgcc 230 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 150 ggccggttcaccaacggctacaacctctccgacgtcatc 188 ||||| ||||||||||||| ||||||| ||||||||||| Sbjct: 301 ggccgcttcaccaacggcttcaacctcgccgacgtcatc 339
>dbj|AK060201.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-G04, full insert sequence Length = 1637 Score = 103 bits (52), Expect = 2e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 40 tgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccggcgccgg 99 |||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| Sbjct: 241 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgacttcctgccgccgccgg 300 Query: 100 cgcc 103 |||| Sbjct: 301 cgcc 304 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 150 ggccggttcaccaacggctacaacctctccgacgtcatc 188 ||||| ||||||||||||| ||||||| ||||||||||| Sbjct: 375 ggccgcttcaccaacggcttcaacctcgccgacgtcatc 413
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 103 bits (52), Expect = 2e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 40 tgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccggcgccgg 99 |||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| Sbjct: 23260778 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgacttcctgccgccgccgg 23260719 Query: 100 cgcc 103 |||| Sbjct: 23260718 cgcc 23260715 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 150 ggccggttcaccaacggctacaacctctccgacgtcatc 188 ||||| ||||||||||||| ||||||| ||||||||||| Sbjct: 23260644 ggccgcttcaccaacggcttcaacctcgccgacgtcatc 23260606 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ttcggcgactcgctggtggac 68 ||||||||||||||||||||| Sbjct: 10070865 ttcggcgactcgctggtggac 10070845
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168063 Score = 103 bits (52), Expect = 2e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 40 tgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccggcgccgg 99 |||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| Sbjct: 145705 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgacttcctgccgccgccgg 145646 Query: 100 cgcc 103 |||| Sbjct: 145645 cgcc 145642 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 150 ggccggttcaccaacggctacaacctctccgacgtcatc 188 ||||| ||||||||||||| ||||||| ||||||||||| Sbjct: 145571 ggccgcttcaccaacggcttcaacctcgccgacgtcatc 145533
>ref|XM_467708.1| Oryza sativa (japonica cultivar-group), mRNA Length = 872 Score = 61.9 bits (31), Expect = 8e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 39 gtgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccgg 93 ||||||||||||||||||||| |||||||||| | |||||| | |||||||||| Sbjct: 357 gtgtacgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 411 Score = 40.1 bits (20), Expect = 2.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 141 aggcccaccggccggttcaccaacggctacaacctctccgacgtcatc 188 ||||||||||| |||||| ||| ||||||||| || ||||| ||||| Sbjct: 459 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 506
>ref|XM_506961.1| PREDICTED Oryza sativa (japonica cultivar-group), P0516G10.12-1 mRNA Length = 1637 Score = 61.9 bits (31), Expect = 8e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 39 gtgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccgg 93 ||||||||||||||||||||| |||||||||| | |||||| | |||||||||| Sbjct: 354 gtgtacgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 408 Score = 40.1 bits (20), Expect = 2.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 141 aggcccaccggccggttcaccaacggctacaacctctccgacgtcatc 188 ||||||||||| |||||| ||| ||||||||| || ||||| ||||| Sbjct: 456 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 503
>ref|XM_467707.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1637 Score = 61.9 bits (31), Expect = 8e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 39 gtgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccgg 93 ||||||||||||||||||||| |||||||||| | |||||| | |||||||||| Sbjct: 353 gtgtacgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 407 Score = 40.1 bits (20), Expect = 2.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 141 aggcccaccggccggttcaccaacggctacaacctctccgacgtcatc 188 ||||||||||| |||||| ||| ||||||||| || ||||| ||||| Sbjct: 455 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 502
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 8e-07 Identities = 49/55 (89%) Strand = Plus / Minus Query: 39 gtgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccgg 93 ||||||||||||||||||||| |||||||||| | |||||| | |||||||||| Sbjct: 30985736 gtgtacgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 30985682 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 137 cggcaggcccaccggccggttcaccaacggc 167 ||||||||||||||||||||||| ||||||| Sbjct: 547505 cggcaggcccaccggccggttcagcaacggc 547475 Score = 48.1 bits (24), Expect = 0.012 Identities = 30/32 (93%) Strand = Plus / Minus Query: 142 ggcccaccggccggttcaccaacggctacaac 173 |||||||||||||||||| |||||| |||||| Sbjct: 27180976 ggcccaccggccggttcagcaacgggtacaac 27180945 Score = 44.1 bits (22), Expect = 0.18 Identities = 40/46 (86%) Strand = Plus / Minus Query: 44 cgtgttcggcgactcgctggtggacgtcagcaacaacgactacctg 89 |||||||||||||||| ||| ||||| |||||||| |||||||| Sbjct: 27176385 cgtgttcggcgactcgacggttgacgtgggcaacaacaactacctg 27176340 Score = 40.1 bits (20), Expect = 2.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 141 aggcccaccggccggttcaccaacggctacaacctctccgacgtcatc 188 ||||||||||| |||||| ||| ||||||||| || ||||| ||||| Sbjct: 30985634 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 30985587
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 61.9 bits (31), Expect = 8e-07 Identities = 49/55 (89%) Strand = Plus / Minus Query: 39 gtgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccgg 93 ||||||||||||||||||||| |||||||||| | |||||| | |||||||||| Sbjct: 40692 gtgtacgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 40638 Score = 40.1 bits (20), Expect = 2.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 141 aggcccaccggccggttcaccaacggctacaacctctccgacgtcatc 188 ||||||||||| |||||| ||| ||||||||| || ||||| ||||| Sbjct: 40590 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 40543
>dbj|AK111360.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-H05, full insert sequence Length = 888 Score = 61.9 bits (31), Expect = 8e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 39 gtgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccgg 93 ||||||||||||||||||||| |||||||||| | |||||| | |||||||||| Sbjct: 357 gtgtacgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 411 Score = 40.1 bits (20), Expect = 2.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 141 aggcccaccggccggttcaccaacggctacaacctctccgacgtcatc 188 ||||||||||| |||||| ||| ||||||||| || ||||| ||||| Sbjct: 459 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 506
>dbj|AK099325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033016K19, full insert sequence Length = 1637 Score = 61.9 bits (31), Expect = 8e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 39 gtgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccgg 93 ||||||||||||||||||||| |||||||||| | |||||| | |||||||||| Sbjct: 353 gtgtacgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 407 Score = 40.1 bits (20), Expect = 2.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 141 aggcccaccggccggttcaccaacggctacaacctctccgacgtcatc 188 ||||||||||| |||||| ||| ||||||||| || ||||| ||||| Sbjct: 455 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 502
>ref|XM_463819.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1742 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 137 cggcaggcccaccggccggttcaccaacggc 167 ||||||||||||||||||||||| ||||||| Sbjct: 551 cggcaggcccaccggccggttcagcaacggc 581
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 2e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 39 gtgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccgg 93 ||||||||||| ||||||||| | |||||||| |||||||| || ||||||||| Sbjct: 30314196 gtgtacgtgttgggcgactcgacgctggacgtcggcaacaacaaccacctgccgg 30314142 Score = 52.0 bits (26), Expect = 8e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 48 ttcggcgactcgctggtggacgtcagcaacaacgactacctg 89 ||||||||||||||| |||||| ||||||||||||||||| Sbjct: 6747010 ttcggcgactcgctgtcggacgtgggcaacaacgactacctg 6747051 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ggggcggctggcgaacgccg 39 |||||||||||||||||||| Sbjct: 27971872 ggggcggctggcgaacgccg 27971853
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 137 cggcaggcccaccggccggttcaccaacggc 167 ||||||||||||||||||||||| ||||||| Sbjct: 25558 cggcaggcccaccggccggttcagcaacggc 25528
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 54.0 bits (27), Expect = 2e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 39 gtgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccgg 93 ||||||||||| ||||||||| | |||||||| |||||||| || ||||||||| Sbjct: 60791 gtgtacgtgttgggcgactcgacgctggacgtcggcaacaacaaccacctgccgg 60737
>dbj|AK110292.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-G01, full insert sequence Length = 1588 Score = 54.0 bits (27), Expect = 2e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 39 gtgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccgg 93 ||||||||||| ||||||||| | |||||||| |||||||| || ||||||||| Sbjct: 301 gtgtacgtgttgggcgactcgacgctggacgtcggcaacaacaaccacctgccgg 355
>dbj|AK106946.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-D11, full insert sequence Length = 1742 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 137 cggcaggcccaccggccggttcaccaacggc 167 ||||||||||||||||||||||| ||||||| Sbjct: 551 cggcaggcccaccggccggttcagcaacggc 581
>dbj|AK070261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042P13, full insert sequence Length = 1637 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 43 acgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccgg 93 ||||||||||||||||| |||||||||| | |||||| | |||||||||| Sbjct: 358 acgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 408 Score = 40.1 bits (20), Expect = 2.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 141 aggcccaccggccggttcaccaacggctacaacctctccgacgtcatc 188 ||||||||||| |||||| ||| ||||||||| || ||||| ||||| Sbjct: 456 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 503
>ref|XM_483839.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1523 Score = 52.0 bits (26), Expect = 8e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 44 cgtgttcggcgactcgctggtggacgtcagcaacaacgactacctg 89 |||||| |||||||||||||||||| | |||||||| |||||||| Sbjct: 224 cgtgtttggcgactcgctggtggacagcggcaacaacaactacctg 269
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 52.0 bits (26), Expect = 8e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 44 cgtgttcggcgactcgctggtggacgtcagcaacaacgactacctg 89 |||||| |||||||||||||||||| | |||||||| |||||||| Sbjct: 28339358 cgtgtttggcgactcgctggtggacagcggcaacaacaactacctg 28339403
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 52.0 bits (26), Expect = 8e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 48 ttcggcgactcgctggtggacgtcagcaacaacgactacctg 89 ||||||||||||||| |||||| ||||||||||||||||| Sbjct: 76689 ttcggcgactcgctgtcggacgtgggcaacaacgactacctg 76730
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 52.0 bits (26), Expect = 8e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 44 cgtgttcggcgactcgctggtggacgtcagcaacaacgactacctg 89 |||||| |||||||||||||||||| | |||||||| |||||||| Sbjct: 68164 cgtgtttggcgactcgctggtggacagcggcaacaacaactacctg 68209
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 52.0 bits (26), Expect = 8e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 44 cgtgttcggcgactcgctggtggacgtcagcaacaacgactacctg 89 |||||| |||||||||||||||||| | |||||||| |||||||| Sbjct: 131173 cgtgtttggcgactcgctggtggacagcggcaacaacaactacctg 131218
>dbj|AK106778.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H02, full insert sequence Length = 1523 Score = 52.0 bits (26), Expect = 8e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 44 cgtgttcggcgactcgctggtggacgtcagcaacaacgactacctg 89 |||||| |||||||||||||||||| | |||||||| |||||||| Sbjct: 224 cgtgtttggcgactcgctggtggacagcggcaacaacaactacctg 269
>ref|NM_196893.1| Oryza sativa (japonica cultivar-group) putative early nodulin gene (Enod) related protein (OSJNBa0071K18.9), mRNA Length = 1384 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Plus Query: 44 cgtgttcggcgactcgctggtggac 68 ||||||||||||||||||||||||| Sbjct: 122 cgtgttcggcgactcgctggtggac 146
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Minus Query: 44 cgtgttcggcgactcgctggtggac 68 ||||||||||||||||||||||||| Sbjct: 103351 cgtgttcggcgactcgctggtggac 103327
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Plus Query: 44 cgtgttcggcgactcgctggtggac 68 ||||||||||||||||||||||||| Sbjct: 16556891 cgtgttcggcgactcgctggtggac 16556915
>dbj|AK108201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C12, full insert sequence Length = 1375 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Plus Query: 44 cgtgttcggcgactcgctggtggac 68 ||||||||||||||||||||||||| Sbjct: 134 cgtgttcggcgactcgctggtggac 158
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Plus Query: 44 cgtgttcggcgactcgctggtggac 68 ||||||||||||||||||||||||| Sbjct: 16565132 cgtgttcggcgactcgctggtggac 16565156
>ref|XM_463040.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1104 Score = 48.1 bits (24), Expect = 0.012 Identities = 33/36 (91%) Strand = Plus / Plus Query: 138 ggcaggcccaccggccggttcaccaacggctacaac 173 |||| |||||||||| |||||| ||||||||||||| Sbjct: 232 ggcaagcccaccggcaggttcagcaacggctacaac 267
>ref|XM_463033.1| Oryza sativa (japonica cultivar-group), mRNA Length = 342 Score = 48.1 bits (24), Expect = 0.012 Identities = 48/56 (85%) Strand = Plus / Plus Query: 40 tgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccggcg 95 |||||||| | |||||||||| || |||||| | |||||| |||||||||||||| Sbjct: 119 tgtacgtgctgggcgactcgcaggcggacgtagggaacaacaactacctgccggcg 174
>ref|XM_463028.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 48.1 bits (24), Expect = 0.012 Identities = 30/32 (93%) Strand = Plus / Plus Query: 39 gtgtacgtgttcggcgactcgctggtggacgt 70 ||||||||| ||||||||||||||| |||||| Sbjct: 97 gtgtacgtgctcggcgactcgctggcggacgt 128
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.012 Identities = 33/36 (91%) Strand = Plus / Plus Query: 138 ggcaggcccaccggccggttcaccaacggctacaac 173 |||| |||||||||| |||||| ||||||||||||| Sbjct: 21161623 ggcaagcccaccggcaggttcagcaacggctacaac 21161658 Score = 48.1 bits (24), Expect = 0.012 Identities = 48/56 (85%) Strand = Plus / Minus Query: 40 tgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccggcg 95 |||||||| | |||||||||| || |||||| | |||||| |||||||||||||| Sbjct: 21123519 tgtacgtgctgggcgactcgcaggcggacgtagggaacaacaactacctgccggcg 21123464 Score = 48.1 bits (24), Expect = 0.012 Identities = 30/32 (93%) Strand = Plus / Minus Query: 39 gtgtacgtgttcggcgactcgctggtggacgt 70 ||||||||| ||||||||||||||| |||||| Sbjct: 21089760 gtgtacgtgctcggcgactcgctggcggacgt 21089729 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 143 gcccaccggccggttcaccaacggc 167 |||||||||||||| |||||||||| Sbjct: 11033363 gcccaccggccggtacaccaacggc 11033387
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 48.1 bits (24), Expect = 0.012 Identities = 33/36 (91%) Strand = Plus / Plus Query: 138 ggcaggcccaccggccggttcaccaacggctacaac 173 |||| |||||||||| |||||| ||||||||||||| Sbjct: 17538 ggcaagcccaccggcaggttcagcaacggctacaac 17573
>gb|AC128645.5| Oryza sativa chromosome 3 BAC OSJNBb0016P23 genomic sequence, complete sequence Length = 131250 Score = 48.1 bits (24), Expect = 0.012 Identities = 48/56 (85%) Strand = Plus / Minus Query: 40 tgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccggcg 95 |||||||| | |||||||||| || |||||| | |||||| |||||||||||||| Sbjct: 101275 tgtacgtgctgggcgactcgcaggcggacgtagggaacaacaactacctgccggcg 101220 Score = 48.1 bits (24), Expect = 0.012 Identities = 30/32 (93%) Strand = Plus / Minus Query: 39 gtgtacgtgttcggcgactcgctggtggacgt 70 ||||||||| ||||||||||||||| |||||| Sbjct: 67516 gtgtacgtgctcggcgactcgctggcggacgt 67485
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.012 Identities = 33/36 (91%) Strand = Plus / Plus Query: 138 ggcaggcccaccggccggttcaccaacggctacaac 173 |||| |||||||||| |||||| ||||||||||||| Sbjct: 21154652 ggcaagcccaccggcaggttcagcaacggctacaac 21154687 Score = 48.1 bits (24), Expect = 0.012 Identities = 48/56 (85%) Strand = Plus / Minus Query: 40 tgtacgtgttcggcgactcgctggtggacgtcagcaacaacgactacctgccggcg 95 |||||||| | |||||||||| || |||||| | |||||| |||||||||||||| Sbjct: 21116548 tgtacgtgctgggcgactcgcaggcggacgtagggaacaacaactacctgccggcg 21116493 Score = 48.1 bits (24), Expect = 0.012 Identities = 30/32 (93%) Strand = Plus / Minus Query: 39 gtgtacgtgttcggcgactcgctggtggacgt 70 ||||||||| ||||||||||||||| |||||| Sbjct: 21082789 gtgtacgtgctcggcgactcgctggcggacgt 21082758 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 143 gcccaccggccggttcaccaacggc 167 |||||||||||||| |||||||||| Sbjct: 11030126 gcccaccggccggtacaccaacggc 11030150
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 48.1 bits (24), Expect = 0.012 Identities = 30/32 (93%) Strand = Plus / Minus Query: 142 ggcccaccggccggttcaccaacggctacaac 173 |||||||||||||||||| |||||| |||||| Sbjct: 77425 ggcccaccggccggttcagcaacgggtacaac 77394 Score = 44.1 bits (22), Expect = 0.18 Identities = 40/46 (86%) Strand = Plus / Minus Query: 44 cgtgttcggcgactcgctggtggacgtcagcaacaacgactacctg 89 |||||||||||||||| ||| ||||| |||||||| |||||||| Sbjct: 72834 cgtgttcggcgactcgacggttgacgtgggcaacaacaactacctg 72789
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 48.1 bits (24), Expect = 0.012 Identities = 30/32 (93%) Strand = Plus / Minus Query: 142 ggcccaccggccggttcaccaacggctacaac 173 |||||||||||||||||| |||||| |||||| Sbjct: 31647 ggcccaccggccggttcagcaacgggtacaac 31616 Score = 44.1 bits (22), Expect = 0.18 Identities = 40/46 (86%) Strand = Plus / Minus Query: 44 cgtgttcggcgactcgctggtggacgtcagcaacaacgactacctg 89 |||||||||||||||| ||| ||||| |||||||| |||||||| Sbjct: 27056 cgtgttcggcgactcgacggttgacgtgggcaacaacaactacctg 27011
>dbj|AK103585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B12, full insert sequence Length = 1312 Score = 48.1 bits (24), Expect = 0.012 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 ggcccaccggccggttcaccaacggctacaac 173 |||||||||||||||||| |||||| |||||| Sbjct: 220 ggcccaccggccggttcagcaacgggtacaac 251
>dbj|AK103166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121E13, full insert sequence Length = 2958 Score = 48.1 bits (24), Expect = 0.012 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 ggcccaccggccggttcaccaacggctacaac 173 |||||||||||||||||| |||||| |||||| Sbjct: 239 ggcccaccggccggttcagcaacgggtacaac 270
>dbj|AK059531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D08, full insert sequence Length = 1451 Score = 48.1 bits (24), Expect = 0.012 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 ggcccaccggccggttcaccaacggctacaac 173 |||||||||||||||||| |||||| |||||| Sbjct: 239 ggcccaccggccggttcagcaacgggtacaac 270
>gb|BT018449.1| Zea mays clone EL01N0407B08.d mRNA sequence Length = 1302 Score = 46.1 bits (23), Expect = 0.047 Identities = 44/51 (86%) Strand = Plus / Plus Query: 121 acggcatggacctccccggcaggcccaccggccggttcaccaacggctaca 171 ||||||| ||| || ||||| | ||||||||||| ||| |||||||||||| Sbjct: 130 acggcatcgacttcgccggcggccccaccggccgcttctccaacggctaca 180
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.047 Identities = 29/31 (93%) Strand = Plus / Minus Query: 137 cggcaggcccaccggccggttcaccaacggc 167 ||||| |||||||||||| |||||||||||| Sbjct: 28170954 cggcatgcccaccggccgcttcaccaacggc 28170924 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 ctgccggcgccggcgcccagggcg 110 ||||||||||||||||||| |||| Sbjct: 7306790 ctgccggcgccggcgcccatggcg 7306767
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 46.1 bits (23), Expect = 0.047 Identities = 29/31 (93%) Strand = Plus / Minus Query: 137 cggcaggcccaccggccggttcaccaacggc 167 ||||| |||||||||||| |||||||||||| Sbjct: 26499 cggcatgcccaccggccgcttcaccaacggc 26469
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 46.1 bits (23), Expect = 0.047 Identities = 29/31 (93%) Strand = Plus / Minus Query: 137 cggcaggcccaccggccggttcaccaacggc 167 ||||| |||||||||||| |||||||||||| Sbjct: 154250 cggcatgcccaccggccgcttcaccaacggc 154220
>dbj|AK061122.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G04, full insert sequence Length = 1666 Score = 46.1 bits (23), Expect = 0.047 Identities = 29/31 (93%) Strand = Plus / Plus Query: 137 cggcaggcccaccggccggttcaccaacggc 167 ||||| |||||||||||| |||||||||||| Sbjct: 366 cggcatgcccaccggccgcttcaccaacggc 396
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 cggcgccggcgcccagggcga 111 ||||||||||||||||||||| Sbjct: 349627 cggcgccggcgcccagggcga 349647
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 cggcgcccagggcgaaccggccgca 121 |||||||||||||||||||| |||| Sbjct: 1769884 cggcgcccagggcgaaccggacgca 1769908
>ref|XM_475723.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 cgtgttcggcgactcgctggtggac 68 ||||||||| ||||||||||||||| Sbjct: 102 cgtgttcggggactcgctggtggac 126
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 cgtgttcggcgactcgctggtggac 68 ||||||||| ||||||||||||||| Sbjct: 984 cgtgttcggggactcgctggtggac 960
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 cgtgttcggcgactcgctggtggac 68 ||||||||| ||||||||||||||| Sbjct: 124936 cgtgttcggggactcgctggtggac 124912
>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence Length = 167588 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Minus Query: 143 gcccaccggccggttcaccaacggc 167 |||||||||||||| |||||||||| Sbjct: 99759 gcccaccggccggtacaccaacggc 99735
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 0.73 Identities = 27/29 (93%) Strand = Plus / Minus Query: 74 caacaacgactacctgccggcgccggcgc 102 ||||||||| ||||||||||||| ||||| Sbjct: 1616244 caacaacgagtacctgccggcgctggcgc 1616216
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 cgtgttcggcgactcgctggtggac 68 ||||||||| ||||||||||||||| Sbjct: 25484575 cgtgttcggggactcgctggtggac 25484551
>emb|AJ234640.1|HVU234640 Hordeum vulgare genomic DNA fragment; clone MWG0904.rev Length = 416 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 cgtgttcggcgactcgctggtggac 68 ||||||||| ||||||||||||||| Sbjct: 367 cgtgttcggggactcgctggtggac 391
>dbj|AK063071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-H02, full insert sequence Length = 987 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 ttcggcgactcgctggtggac 68 ||||||||||||||||||||| Sbjct: 176 ttcggcgactcgctggtggac 196
>dbj|AK061147.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D08, full insert sequence Length = 1315 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 cgtgttcggcgactcgctggtggac 68 ||||||||| ||||||||||||||| Sbjct: 166 cgtgttcggggactcgctggtggac 190
>dbj|AK060625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-G08, full insert sequence Length = 1443 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 143 gcccaccggccggttcaccaacggc 167 |||||||||||||| |||||||||| Sbjct: 387 gcccaccggccggtacaccaacggc 411
>dbj|AK059954.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-C12, full insert sequence Length = 1328 Score = 42.1 bits (21), Expect = 0.73 Identities = 27/29 (93%) Strand = Plus / Plus Query: 160 ccaacggctacaacctctccgacgtcatc 188 ||||||||| ||||||| ||||||||||| Sbjct: 76 ccaacggcttcaacctcgccgacgtcatc 104
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 cggcgccggcgcccagggcga 111 ||||||||||||||||||||| Sbjct: 1137797 cggcgccggcgcccagggcga 1137817
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 143 gcccaccggccggttcaccaacggc 167 |||||||||||||| |||||||||| Sbjct: 76848 gcccaccggccggtacaccaacggc 76872
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 ttcggcgactcgctggtggac 68 ||||||||||||||||||||| Sbjct: 91641 ttcggcgactcgctggtggac 91661
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 ccggcgccggcgcccagggcgaac 113 ||||||||||||||| |||||||| Sbjct: 51137 ccggcgccggcgcccggggcgaac 51160
>ref|NM_191862.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1092 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ccggccggttcaccaacggc 167 |||||||||||||||||||| Sbjct: 203 ccggccggttcaccaacggc 222
>ref|XM_477181.1| Oryza sativa (japonica cultivar-group), mRNA Length = 971 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 ctgccggcgccggcgcccagggcg 110 ||||||||||||||||||| |||| Sbjct: 89 ctgccggcgccggcgcccatggcg 112
>ref|XM_363147.1| Magnaporthe grisea 70-15 hypothetical protein (MG08731.4) partial cds Length = 2499 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 gccggcgccggcgcccaggg 108 |||||||||||||||||||| Sbjct: 1083 gccggcgccggcgcccaggg 1102
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cgccggcgcccagggcgaac 113 |||||||||||||||||||| Sbjct: 1728765 cgccggcgcccagggcgaac 1728784
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ccggccggttcaccaacggc 167 |||||||||||||||||||| Sbjct: 30355419 ccggccggttcaccaacggc 30355438
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ccggccggttcaccaacggc 167 |||||||||||||||||||| Sbjct: 143738 ccggccggttcaccaacggc 143757
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ccggccggttcaccaacggc 167 |||||||||||||||||||| Sbjct: 41146 ccggccggttcaccaacggc 41165
>gb|AE004746.1| Pseudomonas aeruginosa PAO1, section 307 of 529 of the complete genome Length = 10596 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cgccggcgcccagggcgaac 113 |||||||||||||||||||| Sbjct: 654 cgccggcgcccagggcgaac 635
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ggggcggctggcgaacgccg 39 |||||||||||||||||||| Sbjct: 16691 ggggcggctggcgaacgccg 16672
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ggcgccggcgcccagggcga 111 |||||||||||||||||||| Sbjct: 3601659 ggcgccggcgcccagggcga 3601640
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0003H08 Length = 142068 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ggggcggctggcgaacgccg 39 |||||||||||||||||||| Sbjct: 125795 ggggcggctggcgaacgccg 125776
>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0086N05 Length = 163670 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 ctgccggcgccggcgcccagggcg 110 ||||||||||||||||||| |||| Sbjct: 33471 ctgccggcgccggcgcccatggcg 33448
>dbj|AK070946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074K21, full insert sequence Length = 2149 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ccggccggttcaccaacggc 167 |||||||||||||||||||| Sbjct: 299 ccggccggttcaccaacggc 318
>dbj|AK069953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037H24, full insert sequence Length = 970 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 ctgccggcgccggcgcccagggcg 110 ||||||||||||||||||| |||| Sbjct: 88 ctgccggcgccggcgcccatggcg 111
>emb|AL590389.8| Mouse DNA sequence from clone RP23-393F23 on chromosome 2, complete sequence Length = 207901 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 ctgggtttcgagatgagccccaag 221 |||||||||||||| ||||||||| Sbjct: 173276 ctgggtttcgagatcagccccaag 173253 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,103,926 Number of Sequences: 3902068 Number of extensions: 1103926 Number of successful extensions: 96263 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92788 Number of HSP's gapped (non-prelim): 3475 length of query: 225 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 203 effective length of database: 17,147,199,772 effective search space: 3480881553716 effective search space used: 3480881553716 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
