| Clone Name | baet18b02 |
|---|---|
| Clone Library Name | barley_pub |
>COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5| Length = 355 Score = 79.0 bits (193), Expect = 3e-15 Identities = 35/62 (56%), Positives = 43/62 (69%) Frame = +1 Query: 136 KPVVGGAYWGVGARACDSCATEAARLFCRADAAFLCAGCDARAHGSGSRHARVWLCEVCE 315 K + GG WG AR+CD+C + A +FCR D+AFLC CD R H S +RH RVW+CEVCE Sbjct: 9 KSISGG--WGAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIH-SFTRHERVWVCEVCE 65 Query: 316 HA 321 A Sbjct: 66 QA 67
>COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3| Length = 294 Score = 75.5 bits (184), Expect = 3e-14 Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 3/53 (5%) Frame = +1 Query: 172 ARACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHA 321 +R CDSC + AA LFCRADAAFLC CD + H + SRH RVWLCEVCE A Sbjct: 5 SRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQA 57 Score = 35.8 bits (81), Expect = 0.028 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARV 294 C+ C A + C+ADAA LC CD H + RH RV Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERV 91
>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4| Length = 362 Score = 72.8 bits (177), Expect = 2e-13 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%) Frame = +1 Query: 166 VGARACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHA 321 + ++ CDSC + A L+CR DAAFLC CD++ H + SRHARVW+CEVCE A Sbjct: 1 MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQA 55 Score = 35.8 bits (81), Expect = 0.028 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARV 294 C+ C A + C+ADAA LC CD H + RH RV Sbjct: 49 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERV 89
>COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2| Length = 347 Score = 63.9 bits (154), Expect = 1e-10 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 3/56 (5%) Frame = +1 Query: 163 GVGARACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHA 321 G ARACD+C + A ++C AD+A+LC CDAR H + SRH RV +C+ CE A Sbjct: 10 GTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESA 65 Score = 43.5 bits (101), Expect = 1e-04 Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = +1 Query: 175 RACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARV 294 R C SC + A C+ADAA LC CDA H + RH RV Sbjct: 57 RVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRV 99
>COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1| Length = 355 Score = 62.8 bits (151), Expect = 2e-10 Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 3/53 (5%) Frame = +1 Query: 172 ARACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHA 321 A+ACD+C + A ++CRAD+A+LC+ CDA+ H + SRH RV +C+ CE A Sbjct: 9 AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERA 61 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Frame = +1 Query: 175 RACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHA 321 R C SC A FC+ADAA LC CD+ H + RH RV + + E++ Sbjct: 53 RVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYS 104
>CONS_ARATH (Q39057) Zinc finger protein CONSTANS| Length = 373 Score = 61.2 bits (147), Expect = 6e-10 Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 3/53 (5%) Frame = +1 Query: 172 ARACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHA 321 AR CD+C + A ++C AD+A+LC CDA+ H + SRH RV +CE CE A Sbjct: 17 ARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERA 69 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Frame = +1 Query: 175 RACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARV 294 R C+SC A C AD A LC CD+ H + RH RV Sbjct: 61 RVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRV 103
>COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6| Length = 406 Score = 50.8 bits (120), Expect = 8e-07 Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Frame = +1 Query: 145 VGGAYWGVGARACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWL 300 + A G ARACDSC AR +C AD AFLC CD H + RH RV L Sbjct: 5 LASAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRL 59
>COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11| Length = 330 Score = 50.4 bits (119), Expect = 1e-06 Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVC 312 CD C TE A ++C++D+A LC CD H + RH R LCE C Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKC 51
>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16| Length = 417 Score = 49.7 bits (117), Expect = 2e-06 Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Frame = +1 Query: 172 ARACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWL 300 ARACDSC AR +C AD AFLC CD+ H + RH RV L Sbjct: 14 ARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL 59
>COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12| Length = 337 Score = 48.1 bits (113), Expect = 5e-06 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVC 312 CD CAT A ++C++D A LC CD H + RH R +CE C Sbjct: 5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKC 51
>COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10| Length = 373 Score = 48.1 bits (113), Expect = 5e-06 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGSGS---RHARVWLCEVC 312 CD C + + ++CR+DAA LC CD H + + RH+R +CE C Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERC 51
>COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9| Length = 372 Score = 47.8 bits (112), Expect = 7e-06 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGSGS---RHARVWLCEVC 312 CD C + + ++CR+DAA LC CD H + + RH+R +CE C Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERC 51
>COLX_ARATH (Q9C9F4) Putative zinc finger protein At1g68190| Length = 356 Score = 46.6 bits (109), Expect = 2e-05 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Frame = +1 Query: 175 RACDSCATEAARLFCRADAAFLCAGCDARAHGSGS---RHARVWLCEVCEH 318 R C+ C A ++C AD A LC CDA+ H + S RH R LC+ C++ Sbjct: 12 RVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKN 62 Score = 35.8 bits (81), Expect = 0.028 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGSGSRHAR 291 CDSC + + C FLC GC+ + HG GS R Sbjct: 57 CDSCKNQPCVVRCFDHKMFLCHGCNDKFHGGGSSEHR 93
>COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13| Length = 332 Score = 45.4 bits (106), Expect = 3e-05 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%) Frame = +1 Query: 175 RACDSCATEAARLFCRADAAFLCAGCDARAHGSG---SRHARVWLCEVCEHA 321 R CD C + A ++C+AD+A LC CD + H + ++H R LC+ C + Sbjct: 11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNES 62 Score = 36.6 bits (83), Expect = 0.016 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAH-GSGSRHAR 291 CDSC + LFC + + LC CD + H S S H+R Sbjct: 56 CDSCNESPSSLFCETERSVLCQNCDWQHHTASSSLHSR 93
>COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14| Length = 402 Score = 45.1 bits (105), Expect = 5e-05 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Frame = +1 Query: 178 ACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVC 312 AC+ C A LFCRAD A LC CD H + +H R +C+ C Sbjct: 11 ACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNC 58 Score = 34.7 bits (78), Expect = 0.062 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +1 Query: 166 VGARACDSCATEAARLFCRADAAFLCAGCDARAHGSGSRHA 288 V ++ CD+C+ E + C D LC CD HGS S A Sbjct: 50 VRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSA 90
>COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15| Length = 433 Score = 44.7 bits (104), Expect = 6e-05 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVC 312 CD C A LFCRAD A LC CD + H + +H R +C+ C Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNC 55 Score = 34.3 bits (77), Expect = 0.081 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +1 Query: 166 VGARACDSCATEAARLFCRADAAFLCAGCDARAHGSGS 279 V ++ CD+C E + C D LC CD HGS S Sbjct: 47 VRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCS 84
>STHX_ARATH (Q9LQZ7) Putative salt tolerance-like protein At1g75540| Length = 331 Score = 42.4 bits (98), Expect = 3e-04 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 15/60 (25%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVW------------LCEVCE 315 CD C E A +FC AD A LC GCD + H + S+H R LC++C+ Sbjct: 5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQ 64 Score = 37.4 bits (85), Expect = 0.010 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGSG---SRHARVWLCEV 309 CD C + A LFC+ D A LC CD+ H + +H R L V Sbjct: 60 CDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGV 105
>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7| Length = 392 Score = 42.0 bits (97), Expect = 4e-04 Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 4/49 (8%) Frame = +1 Query: 166 VGARACDSCATEA-ARLFCRADAAFLCAGCDARAHGS---GSRHARVWL 300 + AR CD+C + A +C AD AFLC CDA H + RH RV L Sbjct: 17 MAARGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRL 65
>STH_ARATH (Q9SID1) Salt tolerance-like protein| Length = 238 Score = 40.8 bits (94), Expect = 9e-04 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 12/56 (21%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWL---------CEVC 312 CD C A L C AD A LCA CD H + S+H R++L C++C Sbjct: 5 CDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGSGSRHA 288 CD C +AA +FC D A LC CD H +R A Sbjct: 57 CDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSA 92
>STO_ARATH (Q96288) Salt-tolerance protein| Length = 248 Score = 38.9 bits (89), Expect = 0.003 Identities = 17/36 (47%), Positives = 20/36 (55%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGSGSRHA 288 CD C +AA +FC D A LC CD H + SR A Sbjct: 57 CDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSA 92 Score = 36.6 bits (83), Expect = 0.016 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 12/57 (21%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWL---------CEVCE 315 CD C A + C AD A LC CD H + S+H R+ L C++C+ Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQ 61
>COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8| Length = 313 Score = 38.1 bits (87), Expect = 0.006 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Frame = +1 Query: 175 RACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWL 300 RAC+ C + A +C +D AFLC CD H + ++H RV L Sbjct: 13 RACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCL 57
>STHY_ARATH (Q9SYM2) Putative salt tolerance-like protein At1g78600| Length = 299 Score = 31.2 bits (69), Expect = 0.68 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAH 267 CD C + FC D A LC CD H Sbjct: 57 CDICQEASGFFFCLQDRALLCRKCDVAIH 85
>TRI32_HUMAN (Q13049) Tripartite motif protein 32 (EC 6.3.2.-) (Zinc-finger| protein HT2A) (72 kDa Tat-interacting protein) Length = 653 Score = 28.9 bits (63), Expect = 3.4 Identities = 13/34 (38%), Positives = 14/34 (41%) Frame = +1 Query: 166 VGARACDSCATEAARLFCRADAAFLCAGCDARAH 267 VG C SC R FCR+ LC C H Sbjct: 95 VGLLMCRSCGRRLPRQFCRSCGLVLCEPCREADH 128
>FTSK_SALTI (Q8Z814) DNA translocase ftsK| Length = 1343 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -3 Query: 314 SQTSQSQTRAWRDPEPCARASQPAQRNAASARQKSLA 204 +Q ++Q+ W+ P P A A Q A A +A SLA Sbjct: 385 AQPQEAQSAPWQQPVPVASAPQYAATPATAAEYDSLA 421
>FTSK_SALTY (Q8ZQD5) DNA translocase ftsK| Length = 1351 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -3 Query: 314 SQTSQSQTRAWRDPEPCARASQPAQRNAASARQKSLA 204 +Q ++Q+ W+ P P A A Q A A +A SLA Sbjct: 385 AQPQEAQSAPWQQPVPVASAPQYAATPATAAEYDSLA 421
>TRI32_MOUSE (Q8CH72) Tripartite motif protein 32 (EC 6.3.2.-)| Length = 655 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/34 (35%), Positives = 13/34 (38%) Frame = +1 Query: 166 VGARACDSCATEAARLFCRADAAFLCAGCDARAH 267 VG C C R FCR+ LC C H Sbjct: 96 VGLLMCRGCGRRLPRQFCRSCGVVLCEPCREADH 129
>SPTN4_HUMAN (Q9H254) Spectrin beta chain, brain 3 (Spectrin, non-erythroid beta| chain 3) (Beta-IV spectrin) Length = 2564 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +3 Query: 21 AERKSLAESRLLTAANHGGGAGASCACRTVSACH 122 AE + + RLL AA GG AGA+ A T H Sbjct: 656 AESWARDKERLLEAAGGGGAAGAAGAAGTAGGAH 689
>CPB3_CAERE (Q6E3D4) Cytoplasmic polyadenylation element-binding protein 3| Length = 766 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAF--LCAGCDARAHGSG 276 C C TE A FCR F C C A HG G Sbjct: 528 CMVCTTELAHCFCRNRNCFKYYCHTCWAVDHGHG 561
>ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) Length = 574 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGSG--SRHARVWLCE 306 CD A ++C A LC+ C H + ++H RV L + Sbjct: 127 CDEDEAHVASVYCTVCATHLCSDCSQVTHSTKTLAKHRRVPLAD 170
>Y004_MYCPA (Q9L7L4) UPF0232 protein MAP_0004| Length = 181 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -3 Query: 296 QTRAWRDPEPCARASQPAQRNAAS-ARQKSLAASVA 192 Q R+W P P AR QP R A AR++ +A VA Sbjct: 53 QRRSWSGPGPDARDPQPLGRLARDLARKRGWSAQVA 88
>PURP_ARCFU (O30123) 5-formaminoimidazole-4-carboxamide-1-(beta)-D-| ribofuranosyl 5'-monophosphate synthetase (EC 6.3.4.-) (5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate--formate ligase) Length = 359 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -2 Query: 168 HAPVGSADHRLLLPLHGTRSQFDKRS*HQRHRRDWLQ*AGDSQPSFFARP 19 +A +G D LLLP+ G R + R +R+WL+ +G P ++RP Sbjct: 97 NAYIGKFDS-LLLPMFGNRELMIWETDRDR-QREWLERSGVRMPKKYSRP 144 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,483,654 Number of Sequences: 219361 Number of extensions: 416775 Number of successful extensions: 1505 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 1448 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1495 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)