| Clone Name | baet17h10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY586531.1| Secale cereale cell wall beta-glucosidase mRNA, complete cds Length = 2215 Score = 224 bits (113), Expect = 1e-55 Identities = 153/165 (92%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 95 cctgagttcgtgtttcgtgcgcatgcggcggattgcttgctgccccttttgaggtctata 154 |||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 84 cctgagttcgtgtt-cgtgcgcatgcggcggattgctagctgctccttttgaggtctata 142 Query: 155 tatacagtcggtggtgatcggtaccagacacagtgccaagatggggagcttccacaagac 214 ||| | ||||||||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 143 catatactcggtggtgatcgacaccagacagagtgccaagatggggagtttgcacaagac 202 Query: 215 cacctttgttctcctcatgttctgcttggtggcgttgggaagcgc 259 ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 203 cacctttgttctcctcatgttctgcttggcggcgttgggaagcgc 247 Score = 60.0 bits (30), Expect = 4e-06 Identities = 47/50 (94%), Gaps = 2/50 (4%) Strand = Plus / Plus Query: 27 aggcagcaacacgctagacatctttttgccggtttcatcttgctcttgcc 76 |||||||||| |||||||||| ||||||||| |||||||||||||||||| Sbjct: 37 aggcagcaac-cgctagacat-tttttgccgatttcatcttgctcttgcc 84
>gb|U46003.1|HVU46003 Hordeum vulgare beta-D-glucan exohydrolase, isoenzyme ExoII, mRNA, complete cds Length = 2105 Score = 155 bits (78), Expect = 8e-35 Identities = 87/90 (96%) Strand = Plus / Plus Query: 170 gatcggtaccagacacagtgccaagatggggagcttccacaagaccacctttgttctcct 229 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1 gatcggtaccagacacagtgccaagatggggaacttgcacaagaccacctttgttctcct 60 Query: 230 catgttctgcttggtggcgttgggaagcgc 259 |||||||||||||| ||||||||||||||| Sbjct: 61 catgttctgcttggcggcgttgggaagcgc 90
>gb|AY091513.1| Triticum aestivum beta-D-glucan exohydrolase mRNA, complete cds Length = 2116 Score = 97.6 bits (49), Expect = 2e-17 Identities = 52/53 (98%) Strand = Plus / Plus Query: 207 cacaagaccacctttgttctcctcatgttctgcttggtggcgttgggaagcgc 259 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 13 cacaagaccacctttgttctcctcatgttctgcttggcggcgttgggaagcgc 65
>gb|AC105218.4| Homo sapiens chromosome 8, clone RP11-410F13, complete sequence Length = 138416 Score = 42.1 bits (21), Expect = 0.85 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 cttggtggcgttgggaagcgc 259 ||||||||||||||||||||| Sbjct: 8176 cttggtggcgttgggaagcgc 8156
>gb|AC021500.6| Homo sapiens chromosome 8, clone RP11-135K1, complete sequence Length = 160348 Score = 42.1 bits (21), Expect = 0.85 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 cttggtggcgttgggaagcgc 259 ||||||||||||||||||||| Sbjct: 58905 cttggtggcgttgggaagcgc 58925
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 188 tgccaagatggggagcttccacaagacc 215 ||||||||||| ||||||| |||||||| Sbjct: 107580 tgccaagatggagagcttctacaagacc 107553
>gb|AC110883.12| Mus musculus chromosome 8, clone RP23-200N24, complete sequence Length = 293104 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acctttgttctcctcatgtt 235 |||||||||||||||||||| Sbjct: 172503 acctttgttctcctcatgtt 172522
>gb|AC121836.2| Mus musculus BAC clone RP24-73L11 from 8, complete sequence Length = 195192 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acctttgttctcctcatgtt 235 |||||||||||||||||||| Sbjct: 74590 acctttgttctcctcatgtt 74609
>emb|AL645949.16| Human DNA sequence from clone RP11-357G3 on chromosome 4, complete sequence Length = 145151 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccttcccaggcaaggcagca 34 |||||||||||||||||||| Sbjct: 120506 ccttcccaggcaaggcagca 120487
>gb|AC119420.12| Mus musculus strain 129S6/SvEvTac clone rp22-121i21 map 11, complete sequence Length = 168186 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 acttctccttcccaggcaag 28 |||||||||||||||||||| Sbjct: 158359 acttctccttcccaggcaag 158378
>emb|AL606482.14| Mouse DNA sequence from clone RP23-360H16 on chromosome 11 Contains the genes for olfactory receptors MOR135-7, -8, -10 and -28, three olfactory receptor MOR135 pseudogenes, and the gene for olfactory receptor MOR157-1, complete sequence Length = 199115 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 acttctccttcccaggcaag 28 |||||||||||||||||||| Sbjct: 144630 acttctccttcccaggcaag 144611
>emb|BX322538.9| Zebrafish DNA sequence from clone CH211-245G11 in linkage group 15, complete sequence Length = 159879 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ccacaagaccacctttgttc 225 |||||||||||||||||||| Sbjct: 87632 ccacaagaccacctttgttc 87613
>dbj|AB103230.1| Ketupa blakistoni DNA, centromere repeat region, clone: KBL-EcoRI_M22 Length = 366 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acacttctccttcccaggca 26 |||||||||||||||||||| Sbjct: 225 acacttctccttcccaggca 206 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acacttctccttcccaggca 26 |||||||||||||||||||| Sbjct: 45 acacttctccttcccaggca 26
>emb|BX569780.6| Zebrafish DNA sequence from clone CH211-134A17 in linkage group 10, complete sequence Length = 187807 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ctcatgttctgcttggtggc 247 |||||||||||||||||||| Sbjct: 31199 ctcatgttctgcttggtggc 31218
>dbj|AB103285.1| Pulsatrix perspicillata DNA, centromere repeat region, clone: PPE-HaeIII_14 Length = 187 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acacttctccttcccaggca 26 |||||||||||||||||||| Sbjct: 148 acacttctccttcccaggca 129
>dbj|AB103284.1| Pulsatrix perspicillata DNA, centromere repeat region, clone: PPE-HaeIII_9 Length = 183 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acacttctccttcccaggca 26 |||||||||||||||||||| Sbjct: 148 acacttctccttcccaggca 129
>dbj|AB103283.1| Pulsatrix perspicillata DNA, centromere repeat region, clone: PPE-HaeIII_2 Length = 183 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acacttctccttcccaggca 26 |||||||||||||||||||| Sbjct: 148 acacttctccttcccaggca 129
>dbj|AB103252.1| Ketupa blakistoni DNA, centromere repeat region, clone: KBL-EcoRI_S24 Length = 180 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acacttctccttcccaggca 26 |||||||||||||||||||| Sbjct: 45 acacttctccttcccaggca 26
>dbj|AB103251.1| Ketupa blakistoni DNA, centromere repeat region, clone: KBL-EcoRI_S18 Length = 186 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acacttctccttcccaggca 26 |||||||||||||||||||| Sbjct: 45 acacttctccttcccaggca 26
>dbj|AB103240.1| Ketupa blakistoni DNA, centromere repeat region, clone: KBL-EcoRI_S1 Length = 186 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acacttctccttcccaggca 26 |||||||||||||||||||| Sbjct: 45 acacttctccttcccaggca 26
>emb|Z54246.1|HSL219B8 Human DNA sequence from clone LA04NC01-219B8 on chromosome 4, complete sequence Length = 36171 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccttcccaggcaaggcagca 34 |||||||||||||||||||| Sbjct: 2304 ccttcccaggcaaggcagca 2285 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,042,519 Number of Sequences: 3902068 Number of extensions: 2042519 Number of successful extensions: 36043 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 36013 Number of HSP's gapped (non-prelim): 29 length of query: 259 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 237 effective length of database: 17,147,199,772 effective search space: 4063886345964 effective search space used: 4063886345964 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)