| Clone Name | baet17g03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 accagaaccctagcccccgccgccg 45 |||||||||||||| |||||||||| Sbjct: 2371082 accagaaccctagctcccgccgccg 2371058
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036F10 Length = 149415 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 accagaaccctagcccccgccgccg 45 |||||||||||||| |||||||||| Sbjct: 2540 accagaaccctagctcccgccgccg 2516
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 accagaaccctagcccccgccgccg 45 |||||||||||||| |||||||||| Sbjct: 92883 accagaaccctagctcccgccgccg 92859
>dbj|AK103630.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133P12, full insert sequence Length = 2407 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 accagaaccctagcccccgccgccg 45 |||||||||||||| |||||||||| Sbjct: 3 accagaaccctagctcccgccgccg 27
>gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094P07, complete sequence Length = 162311 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gaaccctagcccccgccgcc 44 |||||||||||||||||||| Sbjct: 80239 gaaccctagcccccgccgcc 80220
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 aaccctagcccccgccgccg 45 |||||||||||||||||||| Sbjct: 5655078 aaccctagcccccgccgccg 5655059
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 gaaccctagcccccgccgcc 44 |||||||||||||||||||| Sbjct: 5217160 gaaccctagcccccgccgcc 5217179
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gaaccctagcccccgccgcc 44 |||||||||||||||||||| Sbjct: 20248714 gaaccctagcccccgccgcc 20248695 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gaaccctagcccccgccgcc 44 |||||||||||||||||||| Sbjct: 20230495 gaaccctagcccccgccgcc 20230476 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gaaccctagcccccgccgcc 44 |||||||||||||||||||| Sbjct: 20212275 gaaccctagcccccgccgcc 20212256 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gaaccctagcccccgccgcc 44 |||||||||||||||||||| Sbjct: 20201347 gaaccctagcccccgccgcc 20201328
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 aaccctagcccccgccgccg 45 |||||||||||||||||||| Sbjct: 5654291 aaccctagcccccgccgccg 5654272
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 aaccctagcccccgccgccg 45 |||||||||||||||||||| Sbjct: 118777 aaccctagcccccgccgccg 118758
>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1372_D12 Length = 179898 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gaaccctagcccccgccgcc 44 |||||||||||||||||||| Sbjct: 151102 gaaccctagcccccgccgcc 151083 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gaaccctagcccccgccgcc 44 |||||||||||||||||||| Sbjct: 132883 gaaccctagcccccgccgcc 132864 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gaaccctagcccccgccgcc 44 |||||||||||||||||||| Sbjct: 114663 gaaccctagcccccgccgcc 114644 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gaaccctagcccccgccgcc 44 |||||||||||||||||||| Sbjct: 103735 gaaccctagcccccgccgcc 103716
>dbj|AK107769.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-B05, full insert sequence Length = 940 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 aaccctagcccccgccgccg 45 |||||||||||||||||||| Sbjct: 181 aaccctagcccccgccgccg 162
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 gaaccctagcccccgccgcc 44 |||||||||||||||||||| Sbjct: 5283637 gaaccctagcccccgccgcc 5283656
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 aaccctagcccccgccgcc 44 ||||||||||||||||||| Sbjct: 2543194 aaccctagcccccgccgcc 2543176
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 aaccctagcccccgccgcc 44 ||||||||||||||||||| Sbjct: 30620994 aaccctagcccccgccgcc 30621012
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 aaccctagcccccgccgcc 44 ||||||||||||||||||| Sbjct: 133002 aaccctagcccccgccgcc 133020
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 aaccctagcccccgccgcc 44 ||||||||||||||||||| Sbjct: 2543138 aaccctagcccccgccgcc 2543120
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 aaccctagcccccgccgcc 44 ||||||||||||||||||| Sbjct: 124815 aaccctagcccccgccgcc 124833
>emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122901 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 aaccctagcccccgccgcc 44 ||||||||||||||||||| Sbjct: 298 aaccctagcccccgccgcc 316 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 330,436 Number of Sequences: 3902068 Number of extensions: 330436 Number of successful extensions: 23400 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 23251 Number of HSP's gapped (non-prelim): 149 length of query: 72 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 51 effective length of database: 17,151,101,840 effective search space: 874706193840 effective search space used: 874706193840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)