ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet17f05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 139 bits (70), Expect = 8e-30 Identities = 115/130 (88%) Strand = Plus / Plus Query: 103 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 162 ||||||||||| |||||||| || || ||| ||||||| |||||||||||| ||| |||| Sbjct: 43542 cccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctac 43601 Query: 163 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 222 |||||| ||||| ||||||||||||||| | | |||||| ||||||| |||||||||||| Sbjct: 43602 ctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgc 43661 Query: 223 ctcggcggcg 232 |||||||||| Sbjct: 43662 ctcggcggcg 43671
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 139 bits (70), Expect = 8e-30 Identities = 115/130 (88%) Strand = Plus / Minus Query: 103 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 162 ||||||||||| |||||||| || || ||| ||||||| |||||||||||| ||| |||| Sbjct: 52233 cccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctac 52174 Query: 163 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 222 |||||| ||||| ||||||||||||||| | | |||||| ||||||| |||||||||||| Sbjct: 52173 ctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgc 52114 Query: 223 ctcggcggcg 232 |||||||||| Sbjct: 52113 ctcggcggcg 52104
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 139 bits (70), Expect = 8e-30 Identities = 115/130 (88%) Strand = Plus / Minus Query: 103 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 162 ||||||||||| |||||||| || || ||| ||||||| |||||||||||| ||| |||| Sbjct: 7139013 cccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctac 7138954 Query: 163 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 222 |||||| ||||| ||||||||||||||| | | |||||| ||||||| |||||||||||| Sbjct: 7138953 ctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgc 7138894 Query: 223 ctcggcggcg 232 |||||||||| Sbjct: 7138893 ctcggcggcg 7138884 Score = 127 bits (64), Expect = 3e-26 Identities = 166/200 (83%) Strand = Plus / Minus Query: 95 tgttcgtccccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcc 154 |||| ||||| ||||||| ||| |||| || ||||| |||| ||||||||||||| || Sbjct: 11303067 tgttggtcccgaccgacgacgagatgctgcaaacgcaggccgagctgtggcgccacaccc 11303008 Query: 155 tctgctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggcca 214 ||| ||||||||| ||||| | ||||| ||||||||| |||||||| ||||||| |||| Sbjct: 11303007 tctcctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgcca 11302948 Query: 215 tccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccg 274 ||||||||| |||||||||||| || | | |||| || ||| |||| |||||||| ||| Sbjct: 11302947 tccaccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccca 11302888 Query: 275 cgtccaagctgccgttcctc 294 || ||||||| || |||||| Sbjct: 11302887 cggccaagctccccttcctc 11302868 Score = 123 bits (62), Expect = 5e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 103 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 162 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 11494867 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 11494808 Query: 163 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 222 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 11494807 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 11494748 Query: 223 ctcggcggcgccgcgtcc 240 |||||||||||||||||| Sbjct: 11494747 ctcggcggcgccgcgtcc 11494730 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Plus Query: 124 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 183 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 11482291 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11482350 Query: 184 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 231 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 11482351 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 11482398 Score = 103 bits (52), Expect = 5e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 106 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 165 ||||||| |||||||| || |||||| |||||||||||||||||||||||| || | || Sbjct: 11331664 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 11331605 Query: 166 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 225 ||| ||||| || ||| ||||||||| | |||||| ||||||| |||||||||||| Sbjct: 11331604 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 11331545 Query: 226 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 269 || ||| |||| || | | |||| || ||||||||||||||||| Sbjct: 11331544 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 11331501 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 134 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 193 |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 11550532 ccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtcg 11550473 Query: 194 acctcggcgtccccacggccatccaccgcctcggcggcgccgc 236 | |||||| |||| || | ||||| |||||||||||||||| Sbjct: 11550472 agctcggcatcccgaccacgatccatggcctcggcggcgccgc 11550430 Score = 89.7 bits (45), Expect = 7e-15 Identities = 153/189 (80%) Strand = Plus / Minus Query: 106 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 165 ||||||| |||||||| || |||||| ||||| ||| |||||||||||||| || | || Sbjct: 11355312 accgacgacgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtc 11355253 Query: 166 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 225 ||| ||||| || | | ||||||||| | |||||| ||||||| |||||||||||| | Sbjct: 11355252 acgtccatggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgcc 11355193 Query: 226 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccgcgtccaagctg 285 |||||| |||| || | | |||| || ||||||||||| ||||| || | ||||||| Sbjct: 11355192 ggcggcaccgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctc 11355133 Query: 286 ccgttcctc 294 ||||||||| Sbjct: 11355132 ccgttcctc 11355124 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 203 tccccacggccatccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccc 262 ||||||| |||||||||||| ||||||||||||||| | | |||| ||||| |||| | Sbjct: 11439513 tccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgctc 11439454 Query: 263 tgtccctgcccgcgtccaagctgccgttcctc 294 ||||||| || |||||||||| ||||||||| Sbjct: 11439453 tgtccctcccgccgtccaagctaccgttcctc 11439422 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 114 ggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctcacg 168 ||||||||| || || ||| |||| || ||||||||||||||||||||| ||||| Sbjct: 11439602 ggagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacg 11439548 Score = 46.1 bits (23), Expect = 0.093 Identities = 65/79 (82%) Strand = Plus / Minus Query: 158 gctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatcc 217 ||||| ||| ||||||| ||||| |||||||| || |||||| ||||| || |||| Sbjct: 19031109 gctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatccccgacgcgatcc 19031050 Query: 218 accgcctcggcggcgccgc 236 |||||| |||||||||||| Sbjct: 19031049 accgccgcggcggcgccgc 19031031 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 tcttcacctccaccgacgccg 349 ||||||||||||||||||||| Sbjct: 25593958 tcttcacctccaccgacgccg 25593978 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 338 ccaccgacgccggaacgtaccgcctcaaccctctctcgtacctcctcgtggacggcg 394 ||||||| ||||||||||||| |||| ||| || || | |||||| |||||||||| Sbjct: 11439369 ccaccgataccggaacgtaccgtctcaccccgctgtcatgcctcctggtggacggcg 11439313
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 139 bits (70), Expect = 8e-30 Identities = 115/130 (88%) Strand = Plus / Minus Query: 103 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 162 ||||||||||| |||||||| || || ||| ||||||| |||||||||||| ||| |||| Sbjct: 7204984 cccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctac 7204925 Query: 163 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 222 |||||| ||||| ||||||||||||||| | | |||||| ||||||| |||||||||||| Sbjct: 7204924 ctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgc 7204865 Query: 223 ctcggcggcg 232 |||||||||| Sbjct: 7204864 ctcggcggcg 7204855 Score = 127 bits (64), Expect = 3e-26 Identities = 166/200 (83%) Strand = Plus / Minus Query: 95 tgttcgtccccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcc 154 |||| ||||| ||||||| ||| |||| || ||||| |||| ||||||||||||| || Sbjct: 11382256 tgttggtcccgaccgacgacgagatgctgcaaacgcaggccgagctgtggcgccacaccc 11382197 Query: 155 tctgctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggcca 214 ||| ||||||||| ||||| | ||||| ||||||||| |||||||| ||||||| |||| Sbjct: 11382196 tctcctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgcca 11382137 Query: 215 tccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccg 274 ||||||||| |||||||||||| || | | |||| || ||| |||| |||||||| ||| Sbjct: 11382136 tccaccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccca 11382077 Query: 275 cgtccaagctgccgttcctc 294 || ||||||| || |||||| Sbjct: 11382076 cggccaagctccccttcctc 11382057 Score = 123 bits (62), Expect = 5e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 103 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 162 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 11574056 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 11573997 Query: 163 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 222 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 11573996 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 11573937 Query: 223 ctcggcggcgccgcgtcc 240 |||||||||||||||||| Sbjct: 11573936 ctcggcggcgccgcgtcc 11573919 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Plus Query: 124 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 183 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 11561480 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11561539 Query: 184 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 231 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 11561540 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 11561587 Score = 103 bits (52), Expect = 5e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 106 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 165 ||||||| |||||||| || |||||| |||||||||||||||||||||||| || | || Sbjct: 11410853 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 11410794 Query: 166 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 225 ||| ||||| || ||| ||||||||| | |||||| ||||||| |||||||||||| Sbjct: 11410793 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 11410734 Query: 226 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 269 || ||| |||| || | | |||| || ||||||||||||||||| Sbjct: 11410733 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 11410690 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 134 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 193 |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 11629721 ccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtcg 11629662 Query: 194 acctcggcgtccccacggccatccaccgcctcggcggcgccgc 236 | |||||| |||| || | ||||| |||||||||||||||| Sbjct: 11629661 agctcggcatcccgaccacgatccatggcctcggcggcgccgc 11629619 Score = 89.7 bits (45), Expect = 7e-15 Identities = 153/189 (80%) Strand = Plus / Minus Query: 106 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 165 ||||||| |||||||| || |||||| ||||| ||| |||||||||||||| || | || Sbjct: 11434501 accgacgacgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtc 11434442 Query: 166 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 225 ||| ||||| || | | ||||||||| | |||||| ||||||| |||||||||||| | Sbjct: 11434441 acgtccatggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgcc 11434382 Query: 226 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccgcgtccaagctg 285 |||||| |||| || | | |||| || ||||||||||| ||||| || | ||||||| Sbjct: 11434381 ggcggcaccgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctc 11434322 Query: 286 ccgttcctc 294 ||||||||| Sbjct: 11434321 ccgttcctc 11434313 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 203 tccccacggccatccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccc 262 ||||||| |||||||||||| ||||||||||||||| | | |||| ||||| |||| | Sbjct: 11518702 tccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgctc 11518643 Query: 263 tgtccctgcccgcgtccaagctgccgttcctc 294 ||||||| || |||||||||| ||||||||| Sbjct: 11518642 tgtccctcccgccgtccaagctaccgttcctc 11518611 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 114 ggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctcacg 168 ||||||||| || || ||| |||| || ||||||||||||||||||||| ||||| Sbjct: 11518791 ggagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacg 11518737 Score = 46.1 bits (23), Expect = 0.093 Identities = 65/79 (82%) Strand = Plus / Minus Query: 158 gctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatcc 217 ||||| ||| ||||||| ||||| |||||||| || |||||| ||||| || |||| Sbjct: 19189758 gctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatccccgacgcgatcc 19189699 Query: 218 accgcctcggcggcgccgc 236 |||||| |||||||||||| Sbjct: 19189698 accgccgcggcggcgccgc 19189680 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 tcttcacctccaccgacgccg 349 ||||||||||||||||||||| Sbjct: 25912628 tcttcacctccaccgacgccg 25912648 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 338 ccaccgacgccggaacgtaccgcctcaaccctctctcgtacctcctcgtggacggcg 394 ||||||| ||||||||||||| |||| ||| || || | |||||| |||||||||| Sbjct: 11518558 ccaccgataccggaacgtaccgtctcaccccgctgtcatgcctcctggtggacggcg 11518502
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 127 bits (64), Expect = 3e-26 Identities = 166/200 (83%) Strand = Plus / Minus Query: 95 tgttcgtccccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcc 154 |||| ||||| ||||||| ||| |||| || ||||| |||| ||||||||||||| || Sbjct: 89425 tgttggtcccgaccgacgacgagatgctgcaaacgcaggccgagctgtggcgccacaccc 89366 Query: 155 tctgctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggcca 214 ||| ||||||||| ||||| | ||||| ||||||||| |||||||| ||||||| |||| Sbjct: 89365 tctcctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgcca 89306 Query: 215 tccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccg 274 ||||||||| |||||||||||| || | | |||| || ||| |||| |||||||| ||| Sbjct: 89305 tccaccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccca 89246 Query: 275 cgtccaagctgccgttcctc 294 || ||||||| || |||||| Sbjct: 89245 cggccaagctccccttcctc 89226 Score = 103 bits (52), Expect = 5e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 106 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 165 ||||||| |||||||| || |||||| |||||||||||||||||||||||| || | || Sbjct: 118022 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 117963 Query: 166 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 225 ||| ||||| || ||| ||||||||| | |||||| ||||||| |||||||||||| Sbjct: 117962 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 117903 Query: 226 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 269 || ||| |||| || | | |||| || ||||||||||||||||| Sbjct: 117902 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 117859 Score = 89.7 bits (45), Expect = 7e-15 Identities = 153/189 (80%) Strand = Plus / Minus Query: 106 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 165 ||||||| |||||||| || |||||| ||||| ||| |||||||||||||| || | || Sbjct: 141670 accgacgacgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtc 141611 Query: 166 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 225 ||| ||||| || | | ||||||||| | |||||| ||||||| |||||||||||| | Sbjct: 141610 acgtccatggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgcc 141551 Query: 226 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccgcgtccaagctg 285 |||||| |||| || | | |||| || ||||||||||| ||||| || | ||||||| Sbjct: 141550 ggcggcaccgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctc 141491 Query: 286 ccgttcctc 294 ||||||||| Sbjct: 141490 ccgttcctc 141482
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 123 bits (62), Expect = 5e-25 Identities = 119/138 (86%) Strand = Plus / Plus Query: 103 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 162 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 118921 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 118980 Query: 163 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 222 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 118981 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 119040 Query: 223 ctcggcggcgccgcgtcc 240 |||||||||||||||||| Sbjct: 119041 ctcggcggcgccgcgtcc 119058 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Minus Query: 124 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 183 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 131497 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 131438 Query: 184 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 231 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 131437 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 131390 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 134 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 193 |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 63256 ccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtcg 63315 Query: 194 acctcggcgtccccacggccatccaccgcctcggcggcgccgc 236 | |||||| |||| || | ||||| |||||||||||||||| Sbjct: 63316 agctcggcatcccgaccacgatccatggcctcggcggcgccgc 63358
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence Length = 128418 Score = 123 bits (62), Expect = 5e-25 Identities = 119/138 (86%) Strand = Plus / Plus Query: 103 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 162 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 4670 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 4729 Query: 163 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 222 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 4730 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 4789 Query: 223 ctcggcggcgccgcgtcc 240 |||||||||||||||||| Sbjct: 4790 ctcggcggcgccgcgtcc 4807 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Minus Query: 124 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 183 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 17246 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 17187 Query: 184 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 231 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 17186 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 17139 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 203 tccccacggccatccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccc 262 ||||||| |||||||||||| ||||||||||||||| | | |||| ||||| |||| | Sbjct: 60024 tccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgctc 60083 Query: 263 tgtccctgcccgcgtccaagctgccgttcctc 294 ||||||| || |||||||||| ||||||||| Sbjct: 60084 tgtccctcccgccgtccaagctaccgttcctc 60115 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 114 ggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctcacg 168 ||||||||| || || ||| |||| || ||||||||||||||||||||| ||||| Sbjct: 59935 ggagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacg 59989 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 338 ccaccgacgccggaacgtaccgcctcaaccctctctcgtacctcctcgtggacggcg 394 ||||||| ||||||||||||| |||| ||| || || | |||||| |||||||||| Sbjct: 60168 ccaccgataccggaacgtaccgtctcaccccgctgtcatgcctcctggtggacggcg 60224
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full insert sequence Length = 1362 Score = 123 bits (62), Expect = 5e-25 Identities = 119/138 (86%) Strand = Plus / Plus Query: 103 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 162 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 81 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 140 Query: 163 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 222 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 141 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 200 Query: 223 ctcggcggcgccgcgtcc 240 |||||||||||||||||| Sbjct: 201 ctcggcggcgccgcgtcc 218
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full insert sequence Length = 1264 Score = 123 bits (62), Expect = 5e-25 Identities = 119/138 (86%) Strand = Plus / Plus Query: 103 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 162 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 86 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 145 Query: 163 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 222 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 146 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 205 Query: 223 ctcggcggcgccgcgtcc 240 |||||||||||||||||| Sbjct: 206 ctcggcggcgccgcgtcc 223
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full insert sequence Length = 1300 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Plus Query: 124 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 183 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 118 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 177 Query: 184 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 231 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 178 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 225
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full insert sequence Length = 1262 Score = 103 bits (52), Expect = 5e-19 Identities = 136/164 (82%) Strand = Plus / Plus Query: 106 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 165 ||||||| |||||||| || |||||| |||||||||||||||||||||||| || | || Sbjct: 83 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 142 Query: 166 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 225 ||| ||||| || ||| ||||||||| | |||||| ||||||| |||||||||||| Sbjct: 143 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 202 Query: 226 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 269 || ||| |||| || | | |||| || ||||||||||||||||| Sbjct: 203 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 246
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds Length = 1373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 134 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 193 |||||||||||||||||| ||| | |||||||||| ||||| |||||||||||||||| Sbjct: 94 ccgacctgtggcgccacaccctttactacctcacgtccatggggctccgctgcgccgtca 153 Query: 194 acctcggcgtccccacggccatccaccgcctcggcggcg 232 | |||||| |||| ||||| |||||| |||||| |||| Sbjct: 154 agctcggcatcccgacggcgatccacaacctcggtggcg 192
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence Length = 1299 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 103 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 162 ||||| ||||| |||||||| ||||||||| |||||||||||||||||||||||| |||| Sbjct: 63 cccacggacgccgagctgctgcaggcgcaggccgacctgtggcgccacagcctctactac 122 Query: 163 ct 164 || Sbjct: 123 ct 124 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 256 gccgccctgtccctgcccgcgtccaagctgccgttcctcgcccgcctgctgcgccagctc 315 ||||| ||||||||||| ||| ||||||| |||||||||| ||| || |||| | ||| Sbjct: 216 gccgcgctgtccctgccagcggccaagctcccgttcctcgggcgcgtgatgcggctgctg 275 Query: 316 gccacggcgggcgtcttc 333 | |||| ||||||||||| Sbjct: 276 gtcacgtcgggcgtcttc 293
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 184 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 236 ||||||| ||| |||||| ||||| | ||||||||||||| |||||||||||| Sbjct: 9845396 tgcgccgccgagctcggcatccccgccgccatccaccgccgcggcggcgccgc 9845344 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 178 ctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 236 ||||| ||||||| ||| ||||||||||||| ||||||||||||| || |||||||| Sbjct: 7318265 ctccggtgcgccgccgatctcggcgtccccagcgccatccaccgccggggaggcgccgc 7318207 Score = 44.1 bits (22), Expect = 0.37 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 211 gccatccaccgcctcggcg-gcgccgcgtc 239 ||||||||||||||||||| |||||||||| Sbjct: 25487667 gccatccaccgcctcggcgcgcgccgcgtc 25487638
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 184 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 236 ||||||| ||| |||||| ||||| | ||||||||||||| |||||||||||| Sbjct: 135638 tgcgccgccgagctcggcatccccgccgccatccaccgccgcggcggcgccgc 135586
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 184 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 236 ||||||| ||| |||||| ||||| | ||||||||||||| |||||||||||| Sbjct: 42031 tgcgccgccgagctcggcatccccgccgccatccaccgccgcggcggcgccgc 41979
>dbj|AP004862.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B11 Length = 166004 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 178 ctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 236 ||||| ||||||| ||| ||||||||||||| ||||||||||||| || |||||||| Sbjct: 24850 ctccggtgcgccgccgatctcggcgtccccagcgccatccaccgccggggaggcgccgc 24792
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 178 ctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 236 ||||| ||||||| ||| ||||||||||||| ||||||||||||| || |||||||| Sbjct: 153269 ctccggtgcgccgccgatctcggcgtccccagcgccatccaccgccggggaggcgccgc 153211
>ref|NM_191262.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 170 ccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcg 229 ||||||| ||||||||||||||||| |||||| |||| ||| ||||||||| |||| Sbjct: 92 ccatgtccctccgctgcgccgtcgagctcggcatccctgacgccgtccaccgccgtggcg 151 Query: 230 gcgccg 235 |||||| Sbjct: 152 gcgccg 157
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 170 ccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcg 229 ||||||| ||||||||||||||||| |||||| |||| ||| ||||||||| |||| Sbjct: 31604087 ccatgtccctccgctgcgccgtcgagctcggcatccctgacgccgtccaccgccgtggcg 31604146 Query: 230 gcgccg 235 |||||| Sbjct: 31604147 gcgccg 31604152 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cggcgtccgcatcgacggcg 409 |||||||||||||||||||| Sbjct: 12473536 cggcgtccgcatcgacggcg 12473555
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 170 ccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcg 229 ||||||| ||||||||||||||||| |||||| |||| ||| ||||||||| |||| Sbjct: 17819 ccatgtccctccgctgcgccgtcgagctcggcatccctgacgccgtccaccgccgtggcg 17878 Query: 230 gcgccg 235 |||||| Sbjct: 17879 gcgccg 17884
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 170 ccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcg 229 ||||||| ||||||||||||||||| |||||| |||| ||| ||||||||| |||| Sbjct: 117110 ccatgtccctccgctgcgccgtcgagctcggcatccctgacgccgtccaccgccgtggcg 117169 Query: 230 gcgccg 235 |||||| Sbjct: 117170 gcgccg 117175
>gb|AY103669.1| Zea mays PCO073521 mRNA sequence Length = 1503 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 280 aagctgccgttcctcgcccgcctgctgcgccagctcgccacggcgggcgtcttcacc 336 ||||||||||||||| |||||||||||| | |||||| || ||||||| |||||| Sbjct: 231 aagctgccgttcctccgccgcctgctgcggctcctcgccgcgtcgggcgtgttcacc 287
>gb|AF033496.1|AF033496 Zea mays herbicide safener binding protein (SBP1) mRNA, complete cds Length = 1438 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 280 aagctgccgttcctcgcccgcctgctgcgccagctcgccacggcgggcgtcttcacc 336 ||||||||||||||| |||||||||||| | |||||| || ||||||| |||||| Sbjct: 229 aagctgccgttcctccgccgcctgctgcggctcctcgccgcgtcgggcgtgttcacc 285
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 46.1 bits (23), Expect = 0.093 Identities = 65/79 (82%) Strand = Plus / Minus Query: 158 gctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatcc 217 ||||| ||| ||||||| ||||| |||||||| || |||||| ||||| || |||| Sbjct: 134307 gctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatccccgacgcgatcc 134248 Query: 218 accgcctcggcggcgccgc 236 |||||| |||||||||||| Sbjct: 134247 accgccgcggcggcgccgc 134229
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 46.1 bits (23), Expect = 0.093 Identities = 65/79 (82%) Strand = Plus / Minus Query: 158 gctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatcc 217 ||||| ||| ||||||| ||||| |||||||| || |||||| ||||| || |||| Sbjct: 33927 gctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatccccgacgcgatcc 33868 Query: 218 accgcctcggcggcgccgc 236 |||||| |||||||||||| Sbjct: 33867 accgccgcggcggcgccgc 33849
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 382 ctcgtggacggcgtccgcatcgacggc 408 |||||||||||||||||||||| |||| Sbjct: 749033 ctcgtggacggcgtccgcatcgccggc 749007
>gb|BT017349.1| Zea mays clone EL01N0323G05.c mRNA sequence Length = 773 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 218 accgcctcggcggcgccgcgtccccg 243 ||||||||||||||| |||||||||| Sbjct: 144 accgcctcggcggcggcgcgtccccg 169
>gb|AY658658.1| Synthetic construct Peudomonas aeruginosa clone FLH041495.01F PA2887 gene, partial cds Length = 879 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 395 tccgcatcgacggcgacgccagccag 420 ||||||||||||||| |||||||||| Sbjct: 746 tccgcatcgacggcgccgccagccag 771
>gb|AE012128.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 36 of 460 of the complete genome Length = 10504 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 295 gcccgcctgctgcgccagctcg 316 |||||||||||||||||||||| Sbjct: 7929 gcccgcctgctgcgccagctcg 7950
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 295 gcccgcctgctgcgccagctcg 316 |||||||||||||||||||||| Sbjct: 394827 gcccgcctgctgcgccagctcg 394848 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 cctcgcccgcctgctgcgcc 310 |||||||||||||||||||| Sbjct: 2334300 cctcgcccgcctgctgcgcc 2334281
>gb|AE004715.1| Pseudomonas aeruginosa PAO1, section 276 of 529 of the complete genome Length = 10189 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 395 tccgcatcgacggcgacgccagccag 420 ||||||||||||||| |||||||||| Sbjct: 812 tccgcatcgacggcgccgccagccag 837
>gb|AY957390.1| Pseudomonas stutzeri NosL (nosL), NosY (nosY), and NosF (nosF) genes, complete cds; NosD-like (nosD) gene, complete sequence; and NosZ (nosZ) and NosR (nosR) genes, complete cds Length = 8000 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 396 ccgcatcgacggcgacgccagc 417 |||||||||||||||||||||| Sbjct: 3231 ccgcatcgacggcgacgccagc 3210
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 44.1 bits (22), Expect = 0.37 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 211 gccatccaccgcctcggcg-gcgccgcgtc 239 ||||||||||||||||||| |||||||||| Sbjct: 5984 gccatccaccgcctcggcgcgcgccgcgtc 5955
>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19 Length = 164483 Score = 44.1 bits (22), Expect = 0.37 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 211 gccatccaccgcctcggcg-gcgccgcgtc 239 ||||||||||||||||||| |||||||||| Sbjct: 161676 gccatccaccgcctcggcgcgcgccgcgtc 161647
>emb|X67324.1|ZMFS18 Z.mays MFS18 mRNA Length = 969 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 218 accgcctcggcggcgccgcgtccccg 243 ||||||||||||||| |||||||||| Sbjct: 300 accgcctcggcggcggcgcgtccccg 325
>dbj|AK058562.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D11, full insert sequence Length = 1388 Score = 44.1 bits (22), Expect = 0.37 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 211 gccatccaccgcctcggcg-gcgccgcgtc 239 ||||||||||||||||||| |||||||||| Sbjct: 744 gccatccaccgcctcggcgcgcgccgcgtc 773
>gb|AY106835.1| Zea mays PCO070523 mRNA sequence Length = 727 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 218 accgcctcggcggcgccgcgtccccg 243 ||||||||||||||| |||||||||| Sbjct: 236 accgcctcggcggcggcgcgtccccg 261
>gb|AY103988.1| Zea mays PCO070524 mRNA sequence Length = 1061 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 218 accgcctcggcggcgccgcgtccccg 243 ||||||||||||||| |||||||||| Sbjct: 317 accgcctcggcggcggcgcgtccccg 342
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05, complete sequence Length = 162223 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 tcttcacctccaccgacgccg 349 ||||||||||||||||||||| Sbjct: 84005 tcttcacctccaccgacgccg 84025
>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0015J03, complete sequence Length = 135940 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 tcttcacctccaccgacgccg 349 ||||||||||||||||||||| Sbjct: 77627 tcttcacctccaccgacgccg 77607
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 gtccgcatcgacggcgacgcc 414 ||||||||||||||||||||| Sbjct: 1314673 gtccgcatcgacggcgacgcc 1314693 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 gtccgcatcgacggcgacgcc 414 ||||||||||||||||||||| Sbjct: 1116418 gtccgcatcgacggcgacgcc 1116438
>ref|XM_699726.1| PREDICTED: Danio rerio hypothetical protein LOC558295 (LOC558295), partial mRNA Length = 1515 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 gacgccagccagacggccatc 429 ||||||||||||||||||||| Sbjct: 1051 gacgccagccagacggccatc 1031
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 tcttcacctccaccgacgccg 349 ||||||||||||||||||||| Sbjct: 4214833 tcttcacctccaccgacgccg 4214853
>emb|BX545913.21| Zebrafish DNA sequence from clone DKEY-208P1 in linkage group 17, complete sequence Length = 188037 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 gacgccagccagacggccatc 429 ||||||||||||||||||||| Sbjct: 173603 gacgccagccagacggccatc 173583
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 gtccgcatcgacggcgacgcc 414 ||||||||||||||||||||| Sbjct: 1338232 gtccgcatcgacggcgacgcc 1338252 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 gtccgcatcgacggcgacgcc 414 ||||||||||||||||||||| Sbjct: 1149951 gtccgcatcgacggcgacgcc 1149971
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 tcttcacctccaccgacgccg 349 ||||||||||||||||||||| Sbjct: 4215654 tcttcacctccaccgacgccg 4215674
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 tgcgccagctcgccacggcg 324 |||||||||||||||||||| Sbjct: 1923427 tgcgccagctcgccacggcg 1923446
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cggcgtccgcatcgacggcg 409 |||||||||||||||||||| Sbjct: 1535615 cggcgtccgcatcgacggcg 1535634
>ref|XM_585828.2| PREDICTED: Bos taurus hypothetical LOC508965 (LOC508965), mRNA Length = 1491 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gttcctcgcccgcctgctgc 307 |||||||||||||||||||| Sbjct: 488 gttcctcgcccgcctgctgc 469
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 320 cggcgggcgtcttcacctccaccg 343 |||| ||||||||||||||||||| Sbjct: 1856099 cggctggcgtcttcacctccaccg 1856076
>gb|BC116031.1| Bos taurus cDNA clone MGC:139028 IMAGE:8095211, complete cds Length = 1816 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gttcctcgcccgcctgctgc 307 |||||||||||||||||||| Sbjct: 518 gttcctcgcccgcctgctgc 499
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 cgcccgcctgctgcgccagctcgc 317 ||||||||||| |||||||||||| Sbjct: 68226 cgcccgcctgcggcgccagctcgc 68203
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 cgcccgcctgctgcgccagctcgc 317 ||||||||||| |||||||||||| Sbjct: 68215 cgcccgcctgcggcgccagctcgc 68192
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 cgcccgcctgctgcgccagctcgc 317 ||||||||||| |||||||||||| Sbjct: 35896 cgcccgcctgcggcgccagctcgc 35873
>gb|AE012325.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 233 of 460 of the complete genome Length = 11015 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 cctcgcccgcctgctgcgcc 310 |||||||||||||||||||| Sbjct: 9317 cctcgcccgcctgctgcgcc 9336
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 ggtcgccgccctgtccctgcccgc 275 ||||||||||||||| |||||||| Sbjct: 3933372 ggtcgccgccctgtcgctgcccgc 3933349
>ref|XM_944210.1| PREDICTED: Homo sapiens hypothetical LOC90024 (FLJ20021), mRNA Length = 919 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 gttcctcgcccgcctgctgcgcca 311 |||||| ||||||||||||||||| Sbjct: 749 gttcctggcccgcctgctgcgcca 772
>ref|XM_028217.4| PREDICTED: Homo sapiens hypothetical LOC90024 (FLJ20021), mRNA Length = 919 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 gttcctcgcccgcctgctgcgcca 311 |||||| ||||||||||||||||| Sbjct: 749 gttcctggcccgcctgctgcgcca 772
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 gcccgcctgctgcgccagct 314 |||||||||||||||||||| Sbjct: 222396 gcccgcctgctgcgccagct 222415
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 tcgtggacggcgtccgcatcgacg 406 ||||||||||||||||| |||||| Sbjct: 8571430 tcgtggacggcgtccgcctcgacg 8571407 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 ctcgccacggcgggcgtcttcacctcca 340 |||||| | ||||||||||||||||||| Sbjct: 8081005 ctcgccgccgcgggcgtcttcacctcca 8081032 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cgccgtcgacctcggcgtcc 205 |||||||||||||||||||| Sbjct: 372850 cgccgtcgacctcggcgtcc 372869
>gb|AY204470.1| Myxococcus xanthus clone C1255 adventurous gliding motility protein J (agmJ) gene, complete cds Length = 2085 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gtccccgtccgaactggtcgccgc 260 ||||||| |||||||||||||||| Sbjct: 1240 gtccccggccgaactggtcgccgc 1217
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 ccgacgcggagctgctccaggcgc 130 |||||||||||| ||||||||||| Sbjct: 1355696 ccgacgcggagcagctccaggcgc 1355719
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ccaccgacgcggagctgctc 123 |||||||||||||||||||| Sbjct: 4717181 ccaccgacgcggagctgctc 4717162
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cggcgtccgcatcgacggcg 409 |||||||||||||||||||| Sbjct: 59151 cggcgtccgcatcgacggcg 59170
>dbj|AK000028.1| Homo sapiens cDNA FLJ20021 fis, clone ADSE01233 Length = 806 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 gttcctcgcccgcctgctgcgcca 311 |||||| ||||||||||||||||| Sbjct: 617 gttcctggcccgcctgctgcgcca 640
>ref|NM_207823.1| Eremothecium gossypii AAL072Cp (AAL072C), mRNA Length = 3663 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 gcccgcctgctgcgccagct 314 |||||||||||||||||||| Sbjct: 225 gcccgcctgctgcgccagct 206
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 gcctgctgcgccagctcgcc 318 |||||||||||||||||||| Sbjct: 3010826 gcctgctgcgccagctcgcc 3010845
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 tcgcccgcctgctgcgccagctcg 316 ||||| |||||||||||||||||| Sbjct: 1196482 tcgccagcctgctgcgccagctcg 1196505
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gtccgcatcgacggcgacgc 413 |||||||||||||||||||| Sbjct: 1010676 gtccgcatcgacggcgacgc 1010695
>dbj|AP001816.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:563D14, complete sequence Length = 123323 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 gttcctcgcccgcctgctgcgcca 311 |||||| ||||||||||||||||| Sbjct: 111070 gttcctggcccgcctgctgcgcca 111093 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,198,266 Number of Sequences: 3902068 Number of extensions: 2198266 Number of successful extensions: 54976 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 51867 Number of HSP's gapped (non-prelim): 3103 length of query: 429 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 407 effective length of database: 17,147,199,772 effective search space: 6978910307204 effective search space used: 6978910307204 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
