ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet17f02 |
|---|---|
| Clone Library Name | barley_pub |
>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1| (Stress-associated protein 1) (OsISAP1) Length = 164 Score = 109 bits (272), Expect = 3e-24 Identities = 50/66 (75%), Positives = 50/66 (75%) Frame = +2 Query: 122 MAQRDKKDQEPTELRAPEITLCANSCGFPGNPATQNLCQNCFXXXXXXXXXXXXXXXXVL 301 MAQRDKKDQEPTELRAPEITLCANSCGFPGNPATQNLCQNCF VL Sbjct: 1 MAQRDKKDQEPTELRAPEITLCANSCGFPGNPATQNLCQNCFLAATASTSSPSSLSSPVL 60 Query: 302 DKQPPR 319 DKQPPR Sbjct: 61 DKQPPR 66
>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein| At2g36320 Length = 161 Score = 38.9 bits (89), Expect = 0.005 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = +2 Query: 182 LCANSCGFPGNPATQNLCQNCF 247 LC N+CGF G+ AT NLC NC+ Sbjct: 15 LCVNNCGFFGSSATMNLCSNCY 36
>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein| At4g12040 Length = 175 Score = 37.0 bits (84), Expect = 0.018 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +2 Query: 140 KDQEPTELRAPEITLCANSCGFPGNPATQNLCQNCF 247 ++ T E LC N CGF G+P+ NLC C+ Sbjct: 4 EENNSTSFPPTEPKLCDNGCGFFGSPSNMNLCSKCY 39
>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein| At1g12440 Length = 168 Score = 35.8 bits (81), Expect = 0.040 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +2 Query: 140 KDQEPTELRAPEITLCANSCGFPGNPATQNLCQNCF 247 + + T E LC CGF G+P+ NLC C+ Sbjct: 4 EQNDSTSFSPSEPKLCVKGCGFFGSPSNMNLCSKCY 39
>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 34.3 bits (77), Expect = 0.12 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 Query: 164 RAPEITLCANSCGFPGNPATQNLCQNCF 247 + P LC+ CGF GNP T +C C+ Sbjct: 7 QTPGPMLCSTGCGFYGNPRTNGMCSVCY 34
>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 34.3 bits (77), Expect = 0.12 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 Query: 164 RAPEITLCANSCGFPGNPATQNLCQNCF 247 + P LC+ CGF GNP T +C C+ Sbjct: 7 QTPGPMLCSTGCGFYGNPRTNGMCSVCY 34
>RABX5_HUMAN (Q9UJ41) Rab5 GDP/GTP exchange factor (Rabaptin 5-associated| exchange factor for Rab5) (Rabex-5) Length = 708 Score = 32.3 bits (72), Expect = 0.44 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +2 Query: 182 LCANSCGFPGNPATQNLCQNCF 247 LC CG+ GNPA Q C C+ Sbjct: 156 LCKKGCGYYGNPAWQGFCSKCW 177
>RABX5_BOVIN (O18973) Rab5 GDP/GTP exchange factor (Rabex-5)| Length = 492 Score = 32.3 bits (72), Expect = 0.44 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +2 Query: 182 LCANSCGFPGNPATQNLCQNCF 247 LC CG+ GNPA Q C C+ Sbjct: 18 LCKKGCGYYGNPAWQGFCSKCW 39
>RABX5_MOUSE (Q9JM13) Rab5 GDP/GTP exchange factor (Rabex-5)| Length = 491 Score = 32.3 bits (72), Expect = 0.44 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +2 Query: 182 LCANSCGFPGNPATQNLCQNCF 247 LC CG+ GNPA Q C C+ Sbjct: 18 LCKKGCGYYGNPAWQGFCSKCW 39
>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 28.1 bits (61), Expect = 8.3 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 197 CGFPGNPATQNLCQNCF 247 CGF G+ T NLC CF Sbjct: 20 CGFWGSSKTMNLCSKCF 36
>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 28.1 bits (61), Expect = 8.3 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 197 CGFPGNPATQNLCQNCF 247 CGF G+ T NLC CF Sbjct: 20 CGFWGSSKTMNLCSKCF 36
>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 28.1 bits (61), Expect = 8.3 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 197 CGFPGNPATQNLCQNCF 247 CGF G+ T NLC CF Sbjct: 20 CGFWGSSKTMNLCSKCF 36
>YICE_SHIFL (P0AGN2) Putative purine permease yicE| Length = 463 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = +2 Query: 23 AILITQQTQTASGILSLLREPETKRGILFWLLTMAQRDKKDQEPTELR-APE 175 A L+ T ASG+ + REP +R IL L++A Q+P L+ APE Sbjct: 383 ATLVMFGTIAASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPE 434
>YICE_ECOLI (P0AGM9) Putative purine permease yicE| Length = 463 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = +2 Query: 23 AILITQQTQTASGILSLLREPETKRGILFWLLTMAQRDKKDQEPTELR-APE 175 A L+ T ASG+ + REP +R IL L++A Q+P L+ APE Sbjct: 383 ATLVMFGTIAASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPE 434
>YICE_ECOL6 (P0AGN0) Putative purine permease yicE| Length = 463 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = +2 Query: 23 AILITQQTQTASGILSLLREPETKRGILFWLLTMAQRDKKDQEPTELR-APE 175 A L+ T ASG+ + REP +R IL L++A Q+P L+ APE Sbjct: 383 ATLVMFGTIAASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPE 434
>YICE_ECO57 (P0AGN1) Putative purine permease yicE| Length = 463 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = +2 Query: 23 AILITQQTQTASGILSLLREPETKRGILFWLLTMAQRDKKDQEPTELR-APE 175 A L+ T ASG+ + REP +R IL L++A Q+P L+ APE Sbjct: 383 ATLVMFGTIAASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPE 434
>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog| Length = 226 Score = 28.1 bits (61), Expect = 8.3 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 197 CGFPGNPATQNLCQNCF 247 CGF G+ T NLC CF Sbjct: 20 CGFWGSSKTMNLCSKCF 36 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,348,703 Number of Sequences: 219361 Number of extensions: 442402 Number of successful extensions: 1529 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1451 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1528 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
