| Clone Name | baet17f02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY137590.1| Oryza sativa (indica cultivar-group) multiple stress-associated zinc-finger protein (OSISAP1) gene, complete cds Length = 3139 Score = 819 bits (413), Expect = 0.0 Identities = 413/413 (100%) Strand = Plus / Plus Query: 1 aatcctctcctcgatctctcctgcaatcctcatcacacagcaaacccaaaccgcgagcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2342 aatcctctcctcgatctctcctgcaatcctcatcacacagcaaacccaaaccgcgagcgg 2401 Query: 61 aatcctcagcctgctgagagagcctgagaccaagagggggattcttttttggttattgac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2402 aatcctcagcctgctgagagagcctgagaccaagagggggattcttttttggttattgac 2461 Query: 121 gatggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcac 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2462 gatggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcac 2521 Query: 181 gctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2522 gctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaa 2581 Query: 241 ctgcttcttggcggccacggcgtccacctcgtcgccgtcttctttgtcgtcaccggtgct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2582 ctgcttcttggcggccacggcgtccacctcgtcgccgtcttctttgtcgtcaccggtgct 2641 Query: 301 cgacaagcagccgccgaggccggcggcgccgctggttgagcctcaggctcctctcccacc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2642 cgacaagcagccgccgaggccggcggcgccgctggttgagcctcaggctcctctcccacc 2701 Query: 361 gcctgtggaggagatggcctccgcgctcgcgacggcgccggcgccggtcgcca 413 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2702 gcctgtggaggagatggcctccgcgctcgcgacggcgccggcgccggtcgcca 2754
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 819 bits (413), Expect = 0.0 Identities = 413/413 (100%) Strand = Plus / Plus Query: 1 aatcctctcctcgatctctcctgcaatcctcatcacacagcaaacccaaaccgcgagcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18591636 aatcctctcctcgatctctcctgcaatcctcatcacacagcaaacccaaaccgcgagcgg 18591695 Query: 61 aatcctcagcctgctgagagagcctgagaccaagagggggattcttttttggttattgac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18591696 aatcctcagcctgctgagagagcctgagaccaagagggggattcttttttggttattgac 18591755 Query: 121 gatggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcac 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18591756 gatggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcac 18591815 Query: 181 gctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18591816 gctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaa 18591875 Query: 241 ctgcttcttggcggccacggcgtccacctcgtcgccgtcttctttgtcgtcaccggtgct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18591876 ctgcttcttggcggccacggcgtccacctcgtcgccgtcttctttgtcgtcaccggtgct 18591935 Query: 301 cgacaagcagccgccgaggccggcggcgccgctggttgagcctcaggctcctctcccacc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18591936 cgacaagcagccgccgaggccggcggcgccgctggttgagcctcaggctcctctcccacc 18591995 Query: 361 gcctgtggaggagatggcctccgcgctcgcgacggcgccggcgccggtcgcca 413 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18591996 gcctgtggaggagatggcctccgcgctcgcgacggcgccggcgccggtcgcca 18592048
>dbj|AK119793.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-B06, full insert sequence Length = 708 Score = 819 bits (413), Expect = 0.0 Identities = 413/413 (100%) Strand = Plus / Plus Query: 1 aatcctctcctcgatctctcctgcaatcctcatcacacagcaaacccaaaccgcgagcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6 aatcctctcctcgatctctcctgcaatcctcatcacacagcaaacccaaaccgcgagcgg 65 Query: 61 aatcctcagcctgctgagagagcctgagaccaagagggggattcttttttggttattgac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 aatcctcagcctgctgagagagcctgagaccaagagggggattcttttttggttattgac 125 Query: 121 gatggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcac 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 gatggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcac 185 Query: 181 gctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 gctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaa 245 Query: 241 ctgcttcttggcggccacggcgtccacctcgtcgccgtcttctttgtcgtcaccggtgct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 ctgcttcttggcggccacggcgtccacctcgtcgccgtcttctttgtcgtcaccggtgct 305 Query: 301 cgacaagcagccgccgaggccggcggcgccgctggttgagcctcaggctcctctcccacc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 cgacaagcagccgccgaggccggcggcgccgctggttgagcctcaggctcctctcccacc 365 Query: 361 gcctgtggaggagatggcctccgcgctcgcgacggcgccggcgccggtcgcca 413 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 gcctgtggaggagatggcctccgcgctcgcgacggcgccggcgccggtcgcca 418
>dbj|AK106128.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F08, full insert sequence Length = 914 Score = 819 bits (413), Expect = 0.0 Identities = 413/413 (100%) Strand = Plus / Plus Query: 1 aatcctctcctcgatctctcctgcaatcctcatcacacagcaaacccaaaccgcgagcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aatcctctcctcgatctctcctgcaatcctcatcacacagcaaacccaaaccgcgagcgg 61 Query: 61 aatcctcagcctgctgagagagcctgagaccaagagggggattcttttttggttattgac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 aatcctcagcctgctgagagagcctgagaccaagagggggattcttttttggttattgac 121 Query: 121 gatggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcac 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 gatggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcac 181 Query: 181 gctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaa 241 Query: 241 ctgcttcttggcggccacggcgtccacctcgtcgccgtcttctttgtcgtcaccggtgct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 ctgcttcttggcggccacggcgtccacctcgtcgccgtcttctttgtcgtcaccggtgct 301 Query: 301 cgacaagcagccgccgaggccggcggcgccgctggttgagcctcaggctcctctcccacc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 cgacaagcagccgccgaggccggcggcgccgctggttgagcctcaggctcctctcccacc 361 Query: 361 gcctgtggaggagatggcctccgcgctcgcgacggcgccggcgccggtcgcca 413 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 gcctgtggaggagatggcctccgcgctcgcgacggcgccggcgccggtcgcca 414
>dbj|AK070140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042G11, full insert sequence Length = 860 Score = 819 bits (413), Expect = 0.0 Identities = 413/413 (100%) Strand = Plus / Plus Query: 1 aatcctctcctcgatctctcctgcaatcctcatcacacagcaaacccaaaccgcgagcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7 aatcctctcctcgatctctcctgcaatcctcatcacacagcaaacccaaaccgcgagcgg 66 Query: 61 aatcctcagcctgctgagagagcctgagaccaagagggggattcttttttggttattgac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 aatcctcagcctgctgagagagcctgagaccaagagggggattcttttttggttattgac 126 Query: 121 gatggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcac 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 gatggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcac 186 Query: 181 gctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 gctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaa 246 Query: 241 ctgcttcttggcggccacggcgtccacctcgtcgccgtcttctttgtcgtcaccggtgct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ctgcttcttggcggccacggcgtccacctcgtcgccgtcttctttgtcgtcaccggtgct 306 Query: 301 cgacaagcagccgccgaggccggcggcgccgctggttgagcctcaggctcctctcccacc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cgacaagcagccgccgaggccggcggcgccgctggttgagcctcaggctcctctcccacc 366 Query: 361 gcctgtggaggagatggcctccgcgctcgcgacggcgccggcgccggtcgcca 413 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 gcctgtggaggagatggcctccgcgctcgcgacggcgccggcgccggtcgcca 419
>dbj|AK061067.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-B12, full insert sequence Length = 870 Score = 819 bits (413), Expect = 0.0 Identities = 413/413 (100%) Strand = Plus / Plus Query: 1 aatcctctcctcgatctctcctgcaatcctcatcacacagcaaacccaaaccgcgagcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6 aatcctctcctcgatctctcctgcaatcctcatcacacagcaaacccaaaccgcgagcgg 65 Query: 61 aatcctcagcctgctgagagagcctgagaccaagagggggattcttttttggttattgac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 aatcctcagcctgctgagagagcctgagaccaagagggggattcttttttggttattgac 125 Query: 121 gatggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcac 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 gatggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcac 185 Query: 181 gctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 gctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaa 245 Query: 241 ctgcttcttggcggccacggcgtccacctcgtcgccgtcttctttgtcgtcaccggtgct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 ctgcttcttggcggccacggcgtccacctcgtcgccgtcttctttgtcgtcaccggtgct 305 Query: 301 cgacaagcagccgccgaggccggcggcgccgctggttgagcctcaggctcctctcccacc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 cgacaagcagccgccgaggccggcggcgccgctggttgagcctcaggctcctctcccacc 365 Query: 361 gcctgtggaggagatggcctccgcgctcgcgacggcgccggcgccggtcgcca 413 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 gcctgtggaggagatggcctccgcgctcgcgacggcgccggcgccggtcgcca 418
>gb|AF140722.2| Oryza sativa (indica cultivar-group) multiple stress-responsive zinc-finger protein mRNA, complete cds Length = 844 Score = 795 bits (401), Expect = 0.0 Identities = 401/401 (100%) Strand = Plus / Plus Query: 13 gatctctcctgcaatcctcatcacacagcaaacccaaaccgcgagcggaatcctcagcct 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gatctctcctgcaatcctcatcacacagcaaacccaaaccgcgagcggaatcctcagcct 60 Query: 73 gctgagagagcctgagaccaagagggggattcttttttggttattgacgatggcgcagcg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gctgagagagcctgagaccaagagggggattcttttttggttattgacgatggcgcagcg 120 Query: 133 cgacaagaaggatcaggagccgacggagctcagggcgccggagatcacgctgtgcgccaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgacaagaaggatcaggagccgacggagctcagggcgccggagatcacgctgtgcgccaa 180 Query: 193 cagctgcggattcccgggcaacccggccacgcagaacctctgccagaactgcttcttggc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cagctgcggattcccgggcaacccggccacgcagaacctctgccagaactgcttcttggc 240 Query: 253 ggccacggcgtccacctcgtcgccgtcttctttgtcgtcaccggtgctcgacaagcagcc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggccacggcgtccacctcgtcgccgtcttctttgtcgtcaccggtgctcgacaagcagcc 300 Query: 313 gccgaggccggcggcgccgctggttgagcctcaggctcctctcccaccgcctgtggagga 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gccgaggccggcggcgccgctggttgagcctcaggctcctctcccaccgcctgtggagga 360 Query: 373 gatggcctccgcgctcgcgacggcgccggcgccggtcgcca 413 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gatggcctccgcgctcgcgacggcgccggcgccggtcgcca 401
>ref|XM_483230.1| Oryza sativa (japonica cultivar-group), mRNA Length = 984 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 122 atggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcacg 181 ||||||||| | || ||||||| |||||||||||||||| |||||||||||||| ||| Sbjct: 70 atggcgcagagggagaagaaggtggaggagccgacggagctgagggcgccggagatgacg 129 Query: 182 ctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaac 241 || ||||||||||||||||| ||||||||||||||||| || | ||||||||||||||| Sbjct: 130 ctctgcgccaacagctgcgggttcccgggcaacccggcgaccaacaacctctgccagaac 189 Query: 242 tgcttcttggcggccacggcgtc 264 ||||||||||| ||| ||||||| Sbjct: 190 tgcttcttggctgcctcggcgtc 212
>gb|AY601878.1| Oryza sativa (japonica cultivar-group) putative zinc finger transcription factor (ZFP60) mRNA, complete cds Length = 933 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 122 atggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcacg 181 ||||||||| | || ||||||| |||||||||||||||| |||||||||||||| ||| Sbjct: 63 atggcgcagagggagaagaaggtggaggagccgacggagctgagggcgccggagatgacg 122 Query: 182 ctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaac 241 || ||||||||||||||||| ||||||||||||||||| || | ||||||||||||||| Sbjct: 123 ctctgcgccaacagctgcgggttcccgggcaacccggcgaccaacaacctctgccagaac 182 Query: 242 tgcttcttggcggccacggcgtc 264 ||||||||||| ||| ||||||| Sbjct: 183 tgcttcttggctgcctcggcgtc 205
>gb|AY224422.1| Oryza sativa (japonica cultivar-group) isolate 20116 pathogenesis-related protein-like protein mRNA, complete cds Length = 513 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 122 atggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcacg 181 ||||||||| | || ||||||| |||||||||||||||| |||||||||||||| ||| Sbjct: 1 atggcgcagagggagaagaaggtggaggagccgacggagctgagggcgccggagatgacg 60 Query: 182 ctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaac 241 || ||||||||||||||||| ||||||||||||||||| || | ||||||||||||||| Sbjct: 61 ctctgcgccaacagctgcgggttcccgggcaacccggcgaccaacaacctctgccagaac 120 Query: 242 tgcttcttggcggccacggcgtc 264 ||||||||||| ||| ||||||| Sbjct: 121 tgcttcttggctgcctcggcgtc 143
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 122 atggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcacg 181 ||||||||| | || ||||||| |||||||||||||||| |||||||||||||| ||| Sbjct: 24946763 atggcgcagagggagaagaaggtggaggagccgacggagctgagggcgccggagatgacg 24946822 Query: 182 ctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaac 241 || ||||||||||||||||| ||||||||||||||||| || | ||||||||||||||| Sbjct: 24946823 ctctgcgccaacagctgcgggttcccgggcaacccggcgaccaacaacctctgccagaac 24946882 Query: 242 tgcttcttggcggccacggcgtc 264 ||||||||||| ||| ||||||| Sbjct: 24946883 tgcttcttggctgcctcggcgtc 24946905 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 258 cggcgtccacctcgtcgccgtcttcttt 285 |||||| ||||||||||||||| ||||| Sbjct: 278211 cggcgtgcacctcgtcgccgtcgtcttt 278238
>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0025J22 Length = 175355 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 122 atggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcacg 181 ||||||||| | || ||||||| |||||||||||||||| |||||||||||||| ||| Sbjct: 2879 atggcgcagagggagaagaaggtggaggagccgacggagctgagggcgccggagatgacg 2938 Query: 182 ctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaac 241 || ||||||||||||||||| ||||||||||||||||| || | ||||||||||||||| Sbjct: 2939 ctctgcgccaacagctgcgggttcccgggcaacccggcgaccaacaacctctgccagaac 2998 Query: 242 tgcttcttggcggccacggcgtc 264 ||||||||||| ||| ||||||| Sbjct: 2999 tgcttcttggctgcctcggcgtc 3021
>dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_H03 Length = 135914 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 122 atggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcacg 181 ||||||||| | || ||||||| |||||||||||||||| |||||||||||||| ||| Sbjct: 48478 atggcgcagagggagaagaaggtggaggagccgacggagctgagggcgccggagatgacg 48537 Query: 182 ctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaac 241 || ||||||||||||||||| ||||||||||||||||| || | ||||||||||||||| Sbjct: 48538 ctctgcgccaacagctgcgggttcccgggcaacccggcgaccaacaacctctgccagaac 48597 Query: 242 tgcttcttggcggccacggcgtc 264 ||||||||||| ||| ||||||| Sbjct: 48598 tgcttcttggctgcctcggcgtc 48620
>dbj|AK101969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076J18, full insert sequence Length = 983 Score = 149 bits (75), Expect = 8e-33 Identities = 126/143 (88%) Strand = Plus / Plus Query: 122 atggcgcagcgcgacaagaaggatcaggagccgacggagctcagggcgccggagatcacg 181 ||||||||| | || ||||||| |||||||||||||||| ||||||||| |||| ||| Sbjct: 70 atggcgcagagggagaagaaggtggaggagccgacggagctgagggcgccgtagatgacg 129 Query: 182 ctgtgcgccaacagctgcggattcccgggcaacccggccacgcagaacctctgccagaac 241 || ||||||||||||||||| ||||||||||||||||| || | ||||||||||||||| Sbjct: 130 ctctgcgccaacagctgcgggttcccgggcaacccggcgaccaacaacctctgccagaac 189 Query: 242 tgcttcttggcggccacggcgtc 264 ||||||||||| ||| ||||||| Sbjct: 190 tgcttcttggctgcctcggcgtc 212
>ref|XM_815254.1| Trypanosoma cruzi strain CL Brener 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Tc00.1047053506247.330) partial mRNA Length = 1665 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 atggcgcagcgcgacaagaagg 143 |||||||||||||||||||||| Sbjct: 1417 atggcgcagcgcgacaagaagg 1438
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 cggcgtccacctcgtcgccgtc 279 |||||||||||||||||||||| Sbjct: 1827454 cggcgtccacctcgtcgccgtc 1827433 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgcgacggcgccggcgccgg 407 |||||||||||||||||||| Sbjct: 4123902 cgcgacggcgccggcgccgg 4123921
>ref|XM_463583.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2052 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 389 gcgacggcgccggcgccggtcgcca 413 ||||||||||||||||||| ||||| Sbjct: 988 gcgacggcgccggcgccggccgcca 964
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0497A05 Length = 130919 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 389 gcgacggcgccggcgccggtcgcca 413 ||||||||||||||||||| ||||| Sbjct: 72509 gcgacggcgccggcgccggccgcca 72485
>dbj|AB244276.1| Oryza sativa (japonica cultivar-group) PLA2 mRNA for PLASTOCHRON2, complete cds Length = 2052 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 389 gcgacggcgccggcgccggtcgcca 413 ||||||||||||||||||| ||||| Sbjct: 988 gcgacggcgccggcgccggccgcca 964
>gb|DQ393277.1| Oryza sativa cultivar Yundao32 leafy head 2 gene, complete cds Length = 3946 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 389 gcgacggcgccggcgccggtcgcca 413 ||||||||||||||||||| ||||| Sbjct: 1286 gcgacggcgccggcgccggccgcca 1262
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 267 cctcgtcgccgtcttctttgtcgtcaccg 295 |||||||||||||||| | |||||||||| Sbjct: 3979565 cctcgtcgccgtcttcatcgtcgtcaccg 3979537
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 388 cgcgacggcgccggcgccggtcgcc 412 |||| |||||||||||||||||||| Sbjct: 1521728 cgcgccggcgccggcgccggtcgcc 1521752
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 cgcgacggcgccggcgccggt 408 ||||||||||||||||||||| Sbjct: 19974275 cgcgacggcgccggcgccggt 19974295 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gcagccgccgaggccggcgg 326 |||||||||||||||||||| Sbjct: 639835 gcagccgccgaggccggcgg 639854
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 389 gcgacggcgccggcgccggtcgcca 413 ||||||||||||||||||| ||||| Sbjct: 39518067 gcgacggcgccggcgccggccgcca 39518043 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 gcgacggcgccggcgccggt 408 |||||||||||||||||||| Sbjct: 43056205 gcgacggcgccggcgccggt 43056186 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ccacctcgtcgccgtcttct 283 |||||||||||||||||||| Sbjct: 6393569 ccacctcgtcgccgtcttct 6393550
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1417F08 Length = 155536 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 389 gcgacggcgccggcgccggtcgcca 413 ||||||||||||||||||| ||||| Sbjct: 93081 gcgacggcgccggcgccggccgcca 93057
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 cgcgacggcgccggcgccggt 408 ||||||||||||||||||||| Sbjct: 151876 cgcgacggcgccggcgccggt 151896
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 cgcgacggcgccggcgccggt 408 ||||||||||||||||||||| Sbjct: 78396 cgcgacggcgccggcgccggt 78416
>dbj|AK109402.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G02, full insert sequence Length = 1071 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgcgacggcgccggcgccggt 408 ||||||||||||||||||||| Sbjct: 770 cgcgacggcgccggcgccggt 750
>dbj|AK109400.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D03, full insert sequence Length = 1051 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgcgacggcgccggcgccggt 408 ||||||||||||||||||||| Sbjct: 749 cgcgacggcgccggcgccggt 729
>dbj|AK104564.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D10, full insert sequence Length = 906 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgcgacggcgccggcgccggt 408 ||||||||||||||||||||| Sbjct: 717 cgcgacggcgccggcgccggt 697
>dbj|AK104600.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G02, full insert sequence Length = 988 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgcgacggcgccggcgccggt 408 ||||||||||||||||||||| Sbjct: 749 cgcgacggcgccggcgccggt 729
>dbj|AK065946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049G21, full insert sequence Length = 1007 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgcgacggcgccggcgccggt 408 ||||||||||||||||||||| Sbjct: 718 cgcgacggcgccggcgccggt 698
>dbj|AK061396.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-E05, full insert sequence Length = 1051 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgcgacggcgccggcgccggt 408 ||||||||||||||||||||| Sbjct: 749 cgcgacggcgccggcgccggt 729
>dbj|AK060001.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G10, full insert sequence Length = 940 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgcgacggcgccggcgccggt 408 ||||||||||||||||||||| Sbjct: 746 cgcgacggcgccggcgccggt 726
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 388 cgcgacggcgccggcgccggtcgcc 412 |||| |||||||||||||||||||| Sbjct: 1521728 cgcgccggcgccggcgccggtcgcc 1521752
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183385 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 388 cgcgacggcgccggcgccggtcgcc 412 |||| |||||||||||||||||||| Sbjct: 104004 cgcgccggcgccggcgccggtcgcc 103980
>ref|NM_188464.1| Oryza sativa (japonica cultivar-group), Ozsa8159 predicted mRNA Length = 1209 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ccacctcgtcgccgtcttct 283 |||||||||||||||||||| Sbjct: 625 ccacctcgtcgccgtcttct 606
>ref|XM_463835.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3440 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 gcagccgccgaggccggcgg 326 |||||||||||||||||||| Sbjct: 618 gcagccgccgaggccggcgg 599
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 agccgccgaggccggcggcgccgc 332 |||||||||||||| ||||||||| Sbjct: 2610711 agccgccgaggccgtcggcgccgc 2610688
>ref|XM_548434.2| PREDICTED: Canis familiaris similar to protein kinase PKNbeta (LOC491313), mRNA Length = 2856 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 tcccgggcaacccggccacgcaga 227 |||||||| ||||||||||||||| Sbjct: 953 tcccgggccacccggccacgcaga 930
>gb|CP000322.1| Nitrobacter hamburgensis X14 plasmid 3, complete sequence Length = 121408 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 acggcgccggcgccggtcgc 411 |||||||||||||||||||| Sbjct: 3494 acggcgccggcgccggtcgc 3475
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cgccgaggccggcggcgccg 331 |||||||||||||||||||| Sbjct: 3877824 cgccgaggccggcggcgccg 3877843
>gb|DQ397869.1| Cenarchaeum symbiosum clone C04C05, complete sequence Length = 40287 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 gtccacctcgtcgccgtctt 281 |||||||||||||||||||| Sbjct: 14665 gtccacctcgtcgccgtctt 14646
>gb|DQ397845.1| Cenarchaeum symbiosum clone C01B07, complete sequence Length = 41876 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gtccacctcgtcgccgtctt 281 |||||||||||||||||||| Sbjct: 26295 gtccacctcgtcgccgtctt 26314
>gb|AC021755.9| Homo sapiens chromosome 15 clone RP11-521C20 map 15q15, complete sequence Length = 161794 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 agcctcaggctcctctccca 358 |||||||||||||||||||| Sbjct: 121030 agcctcaggctcctctccca 121049
>gb|AC025429.6| Homo sapiens chromosome 15 clone CTD-2006D8 map 15q14, complete sequence Length = 142698 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 agcctcaggctcctctccca 358 |||||||||||||||||||| Sbjct: 21784 agcctcaggctcctctccca 21803
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 cggccacggcgtccacctcgtcgc 275 |||||||||||||| ||||||||| Sbjct: 4627471 cggccacggcgtccgcctcgtcgc 4627448 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 gcgacggcgccggcgccggtcgcc 412 |||||||||| ||||||||||||| Sbjct: 1125945 gcgacggcgcaggcgccggtcgcc 1125968
>ref|XM_392414.2| PREDICTED: Apis mellifera similar to CG11153-PA, isoform A (LOC408884), mRNA Length = 2232 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggccacggcgtccacctcgtcgcc 276 ||||||||||||| |||||||||| Sbjct: 1116 ggccacggcgtcctcctcgtcgcc 1139
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ccacctcgtcgccgtcttct 283 |||||||||||||||||||| Sbjct: 24370248 ccacctcgtcgccgtcttct 24370229
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ctgcttcttggcggccacgg 260 |||||||||||||||||||| Sbjct: 20659424 ctgcttcttggcggccacgg 20659443
>emb|BX936166.1| Gallus gallus finished cDNA, clone ChEST143h17 Length = 1058 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cacgctgtgcgccaacagct 197 |||||||||||||||||||| Sbjct: 302 cacgctgtgcgccaacagct 283
>emb|BX934492.1| Gallus gallus finished cDNA, clone ChEST606k15 Length = 1052 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cacgctgtgcgccaacagct 197 |||||||||||||||||||| Sbjct: 297 cacgctgtgcgccaacagct 278
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 gcgacggcgccggcgccggt 408 |||||||||||||||||||| Sbjct: 53234 gcgacggcgccggcgccggt 53215
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ccacctcgtcgccgtcttct 283 |||||||||||||||||||| Sbjct: 15964 ccacctcgtcgccgtcttct 15945
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ccacctcgtcgccgtcttct 283 |||||||||||||||||||| Sbjct: 164635 ccacctcgtcgccgtcttct 164616
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gcagccgccgaggccggcgg 326 |||||||||||||||||||| Sbjct: 117888 gcagccgccgaggccggcgg 117907
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 309 agccgccgaggccggcggcgccgc 332 ||||||||||||||| |||||||| Sbjct: 974422 agccgccgaggccggaggcgccgc 974445
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ctgcttcttggcggccacgg 260 |||||||||||||||||||| Sbjct: 81831 ctgcttcttggcggccacgg 81850
>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1579_C03 Length = 122851 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ccacctcgtcgccgtcttct 283 |||||||||||||||||||| Sbjct: 103441 ccacctcgtcgccgtcttct 103422
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1300_E01 Length = 103022 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 258 cggcgtccacctcgtcgccgtcttcttt 285 |||||| ||||||||||||||| ||||| Sbjct: 44637 cggcgtgcacctcgtcgccgtcgtcttt 44664
>dbj|AK121675.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068F09, full insert sequence Length = 957 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ctgcttcttggcggccacgg 260 |||||||||||||||||||| Sbjct: 500 ctgcttcttggcggccacgg 481
>dbj|AK111191.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-B07, full insert sequence Length = 2362 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 gcagccgccgaggccggcgg 326 |||||||||||||||||||| Sbjct: 618 gcagccgccgaggccggcgg 599
>dbj|AK110271.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-C10, full insert sequence Length = 3439 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 gcagccgccgaggccggcgg 326 |||||||||||||||||||| Sbjct: 618 gcagccgccgaggccggcgg 599
>dbj|AK106014.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B05, full insert sequence Length = 1693 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 gcgacggcgccggcgccggt 408 |||||||||||||||||||| Sbjct: 108 gcgacggcgccggcgccggt 89
>dbj|AK104528.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A03, full insert sequence Length = 977 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ctgcttcttggcggccacgg 260 |||||||||||||||||||| Sbjct: 499 ctgcttcttggcggccacgg 480
>dbj|AK104638.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-E03, full insert sequence Length = 956 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ctgcttcttggcggccacgg 260 |||||||||||||||||||| Sbjct: 499 ctgcttcttggcggccacgg 480
>dbj|AK099424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013008N09, full insert sequence Length = 1024 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ccacctcgtcgccgtcttct 283 |||||||||||||||||||| Sbjct: 303 ccacctcgtcgccgtcttct 284
>dbj|AK060896.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C12, full insert sequence Length = 977 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ctgcttcttggcggccacgg 260 |||||||||||||||||||| Sbjct: 499 ctgcttcttggcggccacgg 480
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 gccgccgaggccggcggcgc 329 |||||||||||||||||||| Sbjct: 3515613 gccgccgaggccggcggcgc 3515632 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tcgcgacggcgccggcgccg 406 |||||||||||||||||||| Sbjct: 3176322 tcgcgacggcgccggcgccg 3176341
>emb|AJ277720.1|AST277720 Anopheles stephensi 3' flanking end of Minos transposon insertion site, transgenic line IV, 723 BP Length = 723 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 tcctcgatctctcctgcaat 27 |||||||||||||||||||| Sbjct: 378 tcctcgatctctcctgcaat 397 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,483,382 Number of Sequences: 3902068 Number of extensions: 3483382 Number of successful extensions: 93845 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91371 Number of HSP's gapped (non-prelim): 2474 length of query: 413 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 391 effective length of database: 17,147,199,772 effective search space: 6704555110852 effective search space used: 6704555110852 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)