>OXAA_BRAJA (Q89BQ0) Inner membrane protein oxaA|
          Length = 616

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = +1

Query: 64  LYYFQEFFGRMGSKVLLVT----LLLMGIASQSYAT 159
           L +F  FFG  G  +LLVT    LL   +A++SYA+
Sbjct: 382 LDFFYRFFGNFGISILLVTVIVKLLFFPLANKSYAS 417

>SPTN4_HUMAN (Q9H254) Spectrin beta chain, brain 3 (Spectrin, non-erythroid beta|
           chain 3) (Beta-IV spectrin)
          Length = 2564

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 283 RLHQRHRRQEGEVRLHRLPGQGVRRRRA 366
           RL ++HR   GEV  HR P  G+RR+ A
Sbjct: 810 RLARQHRALTGEVEAHRGPVSGLRRQLA 837

>KTHY_STRP6 (Q5XDM2) Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)|
          Length = 211

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 183 QVVSVKAPGGIALRGYAHQEKGDQKHLGAHPSEELLKIVETR 58
           ++++ + PGG+A+  Y  +   D  H    P  ELL  +  R
Sbjct: 35  EILTTREPGGVAISEYIRELILDINHTAMDPKTELLLYIAAR 76

>ZN512_MACFA (Q95JV5) Zinc finger protein 512|
          Length = 565

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -1

Query: 193 SDQPSGFRQGSWWHSSERLCPSREG*PEAPW--SPSFRRTPENSRDKEY 53
           SD P+ FR+ ++W    R+ P+     E     S   +R P    D++Y
Sbjct: 64  SDFPASFRKSTYWMKMRRIKPAATSHVEGSGGVSAKGKRKPRQEEDEDY 112

>KTHY_STRP8 (Q8P2B1) Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)|
          Length = 211

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 183 QVVSVKAPGGIALRGYAHQEKGDQKHLGAHPSEELLKIVETR 58
           ++++ + PGG+A+  Y  +   D  H    P  ELL  +  R
Sbjct: 35  EILTTREPGGVAISEYIRELILDINHTTMDPKTELLLYIAAR 76

>KTHY_STRP3 (Q8K8H4) Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)|
          Length = 211

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 183 QVVSVKAPGGIALRGYAHQEKGDQKHLGAHPSEELLKIVETR 58
           ++++ + PGG+A+  Y  +   D  H    P  ELL  +  R
Sbjct: 35  EILTTREPGGVAISEYIRELILDINHTTMDPKTELLLYIAAR 76

>ZN512_HUMAN (Q96ME7) Zinc finger protein 512|
          Length = 567

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -1

Query: 193 SDQPSGFRQGSWWHSSERLCPSREG*PEAPW--SPSFRRTPENSRDKEY 53
           SD P+ FR+ ++W    R+ P+     E     S   +R P    D++Y
Sbjct: 65  SDFPASFRKSTYWMKMRRIKPAATSHVEGSGGVSAKGKRKPRQEEDEDY 113

>MAGL2_MOUSE (Q9QZ04) MAGE-like protein 2 (Protein nS7)|
          Length = 490

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 121 G*PEAPWSPSFRRTPENSRDKEYCGGSSGT 32
           G P     P     P  SRD+E+CG S G+
Sbjct: 197 GCPNTSRMPRSLEGPSTSRDQEFCGDSGGS 226


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,658,672
Number of Sequences: 219361
Number of extensions: 480969
Number of successful extensions: 1422
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)