ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet17d02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor 34 0.10
2ADA32_MOUSE (Q8K410) ADAM 32 precursor (A disintegrin and metall... 30 2.0
3KPRS2_STRMU (Q8DU94) Ribose-phosphate pyrophosphokinase 2 (EC 2.... 28 5.7
4NLTP_VIGUN (Q43681) Probable nonspecific lipid-transfer protein ... 27 9.8
5K1045_PONPY (Q5R4R7) Protein KIAA1045 homolog 27 9.8
6K1045_HUMAN (Q9UPV7) Protein KIAA1045 27 9.8
7MEP50_MOUSE (Q99J09) Methylosome protein 50 (MEP50 protein) (WD-... 27 9.8

>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor|
          Length = 1700

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 182  PACASKLVGCASSMNGTDAEKPPETCCGPLRDAVKNERACLC 307
            P C +K + C  +     A +PP   CGP R   K + AC C
Sbjct: 1532 PGCGAKKIWCQETCKCECASEPPRMGCGPNRYWDKEDCACQC 1573



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>ADA32_MOUSE (Q8K410) ADAM 32 precursor (A disintegrin and metalloprotease|
           domain 32)
          Length = 750

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 227 GTDAEKPPETCCGPLRDAVKNERAC 301
           G++AE  P++CC P R  +K  RAC
Sbjct: 404 GSEAECGPDSCCEPNRCVLKAGRAC 428



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>KPRS2_STRMU (Q8DU94) Ribose-phosphate pyrophosphokinase 2 (EC 2.7.6.1) (RPPK 2)|
           (Phosphoribosyl pyrophosphate synthetase 2) (P-Rib-PP
           synthetase 2) (PRPP synthetase 2)
          Length = 326

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -3

Query: 77  GEALLRCHERRKVVPFFS 24
           GEA++R HERR V P F+
Sbjct: 301 GEAIIRIHERRPVSPLFA 318



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>NLTP_VIGUN (Q43681) Probable nonspecific lipid-transfer protein AKCS9|
           precursor (LTP)
          Length = 99

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +2

Query: 194 SKLVGCASSMNGTDAEKPPETCCGPLRDAVKNERACLCALYASPEI 331
           ++L  C  ++ G    KP  TCC  L    K +  CLC    +P +
Sbjct: 37  TELSSCVPAITG--GSKPSSTCCSKL----KVQEPCLCNYIKNPSL 76



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>K1045_PONPY (Q5R4R7) Protein KIAA1045 homolog|
          Length = 400

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 233 DAEKPPETCCGPLRDAVKNERACLCALYASPEI 331
           D +KPPE C  P    V +E   +C ++ +  +
Sbjct: 112 DDDKPPEICLEPREPVVNDEMCDVCEVWTAESL 144



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>K1045_HUMAN (Q9UPV7) Protein KIAA1045|
          Length = 400

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 233 DAEKPPETCCGPLRDAVKNERACLCALYASPEI 331
           D +KPPE C  P    V +E   +C ++ +  +
Sbjct: 112 DDDKPPEICLEPREPVVNDEMCDVCEVWTAESL 144



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>MEP50_MOUSE (Q99J09) Methylosome protein 50 (MEP50 protein) (WD-repeat protein|
           77)
          Length = 342

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -2

Query: 291 SFLTASLSGPQQVSGGFSASVPFMELAQPTSLD---AHAG 181
           S +T   SG Q VSG     +   +LAQ  SL+   AHAG
Sbjct: 129 STVTVLSSGTQAVSGSKDCCIKIWDLAQQVSLNSYRAHAG 168


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,270,784
Number of Sequences: 219361
Number of extensions: 324857
Number of successful extensions: 1111
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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