ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet17c06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 418 e-114
2gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare str... 418 e-114
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 418 e-114
4dbj|AK101290.1| Oryza sativa (japonica cultivar-group) cDNA clon... 418 e-114
5ref|XM_479608.1| Oryza sativa (japonica cultivar-group), mRNA 238 1e-59
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 238 1e-59
7dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic D... 238 1e-59
8dbj|AK071235.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 1e-59
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
10dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
11ref|NM_187867.1| Oryza sativa (japonica cultivar-group), Ozsa831... 42 1.5
12gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 42 1.5
13ref|XM_843976.1| PREDICTED: Canis familiaris hypothetical protei... 42 1.5
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.5
16gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.5
17dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
18dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
19dbj|AB070957.1| Streptomyces avermitilis peptide-8 biosynthetic ... 42 1.5
20ref|XM_479759.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
21ref|NM_187686.1| Oryza sativa (japonica cultivar-group), predic... 40 5.8
22gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipie... 40 5.8
23gb|DQ145245.1| Drosophila miranda neo-Y Ih gene, partial sequence 40 5.8
24gb|DQ145244.1| Drosophila miranda neo-X Ih gene, partial sequence 40 5.8
25ref|XM_804612.1| Trypanosoma cruzi strain CL Brener translation ... 40 5.8
26ref|XM_809883.1| Trypanosoma cruzi strain CL Brener translation ... 40 5.8
27emb|AL590235.23| Human DNA sequence from clone RP11-529E10 on ch... 40 5.8
28gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
29gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
30dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
31dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
32dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
33dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
34dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
35dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
36dbj|AK111245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
37gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.8
38gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
39emb|Z69362.1|HSL241B9A Human DNA sequence from clone LA04NC01-24... 40 5.8
40gb|U09991.1|SVU09991 Streptomyces venezuelae ISP5230 chloramphen... 40 5.8
41dbj|AB070952.1| Streptomyces avermitilis peptide-3 biosynthetic ... 40 5.8
42emb|AL805895.4| Mouse DNA sequence from clone RP23-64K11 on chro... 40 5.8 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  418 bits (211), Expect = e-114
 Identities = 364/415 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1        caagctcctgctccgccgccgcacggccgccatggcggccctcgacgcgggcctcccagc 60
                |||||||||||||||||| |||||||| |||||||| || |||||||| |||||||| ||
Sbjct: 10746019 caagctcctgctccgccggcgcacggctgccatggccgcgctcgacgctggcctcccggc 10745960

                                                                            
Query: 61       ggaggctgtccgccatttctccaagatactcgaggcacgccgtggcgtgctcccgcacac 120
                |||||| |||||||||||||||||||| || ||||| |||||||||||||| |||||| |
Sbjct: 10745959 ggaggccgtccgccatttctccaagatcctagaggcgcgccgtggcgtgctgccgcaccc 10745900

                                                                            
Query: 121      cttcgccgccgcgtgcctcgtcggccgtgccgcctcgttccaggccggcgggcgcccagc 180
                 |||||||||||||||||||| ||||| |||||| ||||||||||||| || ||||| ||
Sbjct: 10745899 gttcgccgccgcgtgcctcgttggccgcgccgccgcgttccaggccggtggccgccccgc 10745840

                                                                            
Query: 181      agacgccatagcagattgcaaccgtgcgctggctctcgaccctgcgtacatcccggcgct 240
                 |||||||| || || |||||||||||||| || |||||||| || ||||||||||||||
Sbjct: 10745839 cgacgccatcgcggactgcaaccgtgcgctcgcgctcgaccccgcctacatcccggcgct 10745780

                                                                            
Query: 241      ccgcgcccgtgccgaccttcttcagtccgtgggggcgctcagcgattcccttcgtgacct 300
                ||||||||||||||||||||||||||||||||| |||||   |||||  || ||||||||
Sbjct: 10745779 ccgcgcccgtgccgaccttcttcagtccgtgggtgcgcttgccgattgtctccgtgacct 10745720

                                                                            
Query: 301      tgaccacctcaaacttctgtacgacgcggcgctccgtgacggcaagctgccggggcctag 360
                |||||| ||||| || || || ||||| |||||||| ||||| ||||| || || || ||
Sbjct: 10745719 tgaccatctcaagctactctatgacgccgcgctccgggacgggaagcttccaggccccag 10745660

                                                                       
Query: 361      gtggcgaccgcagggtggtgtgcgctaccgcgagatcgccggcgctcaccgcaag 415
                ||||||||| |||||||| || || |||||||||||||||||||| |||||||||
Sbjct: 10745659 gtggcgaccacagggtggcgtccggtaccgcgagatcgccggcgcgcaccgcaag 10745605



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 3       agctcctgctccgccgccgc 22
               ||||||||||||||||||||
Sbjct: 6359343 agctcctgctccgccgccgc 6359324
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>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0032G21, from chromosome 3, complete sequence
          Length = 187621

 Score =  418 bits (211), Expect = e-114
 Identities = 364/415 (87%)
 Strand = Plus / Minus

                                                                          
Query: 1      caagctcctgctccgccgccgcacggccgccatggcggccctcgacgcgggcctcccagc 60
              |||||||||||||||||| |||||||| |||||||| || |||||||| |||||||| ||
Sbjct: 162933 caagctcctgctccgccggcgcacggctgccatggccgcgctcgacgctggcctcccggc 162874

                                                                          
Query: 61     ggaggctgtccgccatttctccaagatactcgaggcacgccgtggcgtgctcccgcacac 120
              |||||| |||||||||||||||||||| || ||||| |||||||||||||| |||||| |
Sbjct: 162873 ggaggccgtccgccatttctccaagatcctagaggcgcgccgtggcgtgctgccgcaccc 162814

                                                                          
Query: 121    cttcgccgccgcgtgcctcgtcggccgtgccgcctcgttccaggccggcgggcgcccagc 180
               |||||||||||||||||||| ||||| |||||| ||||||||||||| || ||||| ||
Sbjct: 162813 gttcgccgccgcgtgcctcgttggccgcgccgccgcgttccaggccggtggccgccccgc 162754

                                                                          
Query: 181    agacgccatagcagattgcaaccgtgcgctggctctcgaccctgcgtacatcccggcgct 240
               |||||||| || || |||||||||||||| || |||||||| || ||||||||||||||
Sbjct: 162753 cgacgccatcgcggactgcaaccgtgcgctcgcgctcgaccccgcctacatcccggcgct 162694

                                                                          
Query: 241    ccgcgcccgtgccgaccttcttcagtccgtgggggcgctcagcgattcccttcgtgacct 300
              ||||||||||||||||||||||||||||||||| |||||   |||||  || ||||||||
Sbjct: 162693 ccgcgcccgtgccgaccttcttcagtccgtgggtgcgcttgccgattgtctccgtgacct 162634

                                                                          
Query: 301    tgaccacctcaaacttctgtacgacgcggcgctccgtgacggcaagctgccggggcctag 360
              |||||| ||||| || || || ||||| |||||||| ||||| ||||| || || || ||
Sbjct: 162633 tgaccatctcaagctactctatgacgccgcgctccgggacgggaagcttccaggccccag 162574

                                                                     
Query: 361    gtggcgaccgcagggtggtgtgcgctaccgcgagatcgccggcgctcaccgcaag 415
              ||||||||| |||||||| || || |||||||||||||||||||| |||||||||
Sbjct: 162573 gtggcgaccacagggtggcgtccggtaccgcgagatcgccggcgcgcaccgcaag 162519
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  418 bits (211), Expect = e-114
 Identities = 364/415 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1        caagctcctgctccgccgccgcacggccgccatggcggccctcgacgcgggcctcccagc 60
                |||||||||||||||||| |||||||| |||||||| || |||||||| |||||||| ||
Sbjct: 10744120 caagctcctgctccgccggcgcacggctgccatggccgcgctcgacgctggcctcccggc 10744061

                                                                            
Query: 61       ggaggctgtccgccatttctccaagatactcgaggcacgccgtggcgtgctcccgcacac 120
                |||||| |||||||||||||||||||| || ||||| |||||||||||||| |||||| |
Sbjct: 10744060 ggaggccgtccgccatttctccaagatcctagaggcgcgccgtggcgtgctgccgcaccc 10744001

                                                                            
Query: 121      cttcgccgccgcgtgcctcgtcggccgtgccgcctcgttccaggccggcgggcgcccagc 180
                 |||||||||||||||||||| ||||| |||||| ||||||||||||| || ||||| ||
Sbjct: 10744000 gttcgccgccgcgtgcctcgttggccgcgccgccgcgttccaggccggtggccgccccgc 10743941

                                                                            
Query: 181      agacgccatagcagattgcaaccgtgcgctggctctcgaccctgcgtacatcccggcgct 240
                 |||||||| || || |||||||||||||| || |||||||| || ||||||||||||||
Sbjct: 10743940 cgacgccatcgcggactgcaaccgtgcgctcgcgctcgaccccgcctacatcccggcgct 10743881

                                                                            
Query: 241      ccgcgcccgtgccgaccttcttcagtccgtgggggcgctcagcgattcccttcgtgacct 300
                ||||||||||||||||||||||||||||||||| |||||   |||||  || ||||||||
Sbjct: 10743880 ccgcgcccgtgccgaccttcttcagtccgtgggtgcgcttgccgattgtctccgtgacct 10743821

                                                                            
Query: 301      tgaccacctcaaacttctgtacgacgcggcgctccgtgacggcaagctgccggggcctag 360
                |||||| ||||| || || || ||||| |||||||| ||||| ||||| || || || ||
Sbjct: 10743820 tgaccatctcaagctactctatgacgccgcgctccgggacgggaagcttccaggccccag 10743761

                                                                       
Query: 361      gtggcgaccgcagggtggtgtgcgctaccgcgagatcgccggcgctcaccgcaag 415
                ||||||||| |||||||| || || |||||||||||||||||||| |||||||||
Sbjct: 10743760 gtggcgaccacagggtggcgtccggtaccgcgagatcgccggcgcgcaccgcaag 10743706



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 3       agctcctgctccgccgccgc 22
               ||||||||||||||||||||
Sbjct: 6358556 agctcctgctccgccgccgc 6358537
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>dbj|AK101290.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033G09, full
            insert sequence
          Length = 2465

 Score =  418 bits (211), Expect = e-114
 Identities = 364/415 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    caagctcctgctccgccgccgcacggccgccatggcggccctcgacgcgggcctcccagc 60
            |||||||||||||||||| |||||||| |||||||| || |||||||| |||||||| ||
Sbjct: 903  caagctcctgctccgccggcgcacggctgccatggccgcgctcgacgctggcctcccggc 962

                                                                        
Query: 61   ggaggctgtccgccatttctccaagatactcgaggcacgccgtggcgtgctcccgcacac 120
            |||||| |||||||||||||||||||| || ||||| |||||||||||||| |||||| |
Sbjct: 963  ggaggccgtccgccatttctccaagatcctagaggcgcgccgtggcgtgctgccgcaccc 1022

                                                                        
Query: 121  cttcgccgccgcgtgcctcgtcggccgtgccgcctcgttccaggccggcgggcgcccagc 180
             |||||||||||||||||||| ||||| |||||| ||||||||||||| || ||||| ||
Sbjct: 1023 gttcgccgccgcgtgcctcgttggccgcgccgccgcgttccaggccggtggccgccccgc 1082

                                                                        
Query: 181  agacgccatagcagattgcaaccgtgcgctggctctcgaccctgcgtacatcccggcgct 240
             |||||||| || || |||||||||||||| || |||||||| || ||||||||||||||
Sbjct: 1083 cgacgccatcgcggactgcaaccgtgcgctcgcgctcgaccccgcctacatcccggcgct 1142

                                                                        
Query: 241  ccgcgcccgtgccgaccttcttcagtccgtgggggcgctcagcgattcccttcgtgacct 300
            ||||||||||||||||||||||||||||||||| |||||   |||||  || ||||||||
Sbjct: 1143 ccgcgcccgtgccgaccttcttcagtccgtgggtgcgcttgccgattgtctccgtgacct 1202

                                                                        
Query: 301  tgaccacctcaaacttctgtacgacgcggcgctccgtgacggcaagctgccggggcctag 360
            |||||| ||||| || || || ||||| |||||||| ||||| ||||| || || || ||
Sbjct: 1203 tgaccatctcaagctactctatgacgccgcgctccgggacgggaagcttccaggccccag 1262

                                                                   
Query: 361  gtggcgaccgcagggtggtgtgcgctaccgcgagatcgccggcgctcaccgcaag 415
            ||||||||| |||||||| || || |||||||||||||||||||| |||||||||
Sbjct: 1263 gtggcgaccacagggtggcgtccggtaccgcgagatcgccggcgcgcaccgcaag 1317
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>ref|XM_479608.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2204

 Score =  238 bits (120), Expect = 1e-59
 Identities = 339/412 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1    caagctcctgctccgccgccgcacggccgccatggcggccctcgacgcgggcctcccagc 60
            |||||||||||||||||| ||| | |||||  ||||||| || ||||||| |||||| ||
Sbjct: 785  caagctcctgctccgccggcgcgccgccgcggtggcggcgctggacgcggacctccccgc 844

                                                                        
Query: 61   ggaggctgtccgccatttctccaagatactcgaggcacgccgtggcgtgctcccgcacac 120
             ||||| || ||||||||||||||| | ||||| || || |||||||||||||||||| |
Sbjct: 845  cgaggccgtgcgccatttctccaaggtgctcgacgcgcggcgtggcgtgctcccgcaccc 904

                                                                        
Query: 121  cttcgccgccgcgtgcctcgtcggccgtgccgcctcgttccaggccggcgggcgcccagc 180
             |||||  |||| |||||||||||||| ||||   || |||   || |||||||  ||||
Sbjct: 905  gttcgcgaccgcctgcctcgtcggccgcgccgaggcgctccgttccagcgggcgggcagc 964

                                                                        
Query: 181  agacgccatagcagattgcaaccgtgcgctggctctcgaccctgcgtacatcccggcgct 240
             |||||||| || || |||||||| ||||| || || ||||| |||| ||||||||||||
Sbjct: 965  cgacgccatcgccgactgcaaccgcgcgctcgcgcttgacccggcgttcatcccggcgct 1024

                                                                        
Query: 241  ccgcgcccgtgccgaccttcttcagtccgtgggggcgctcagcgattcccttcgtgacct 300
             ||| | || |||||||||||  |||| || |||||||||||||| | ||| || |||||
Sbjct: 1025 gcgctcgcgcgccgaccttctcgagtcggtaggggcgctcagcgactgcctccgcgacct 1084

                                                                        
Query: 301  tgaccacctcaaacttctgtacgacgcggcgctccgtgacggcaagctgccggggcctag 360
             || |||||||| || || ||||||||||||||||| |||||||||||||||||||| | 
Sbjct: 1085 ggagcacctcaagctcctctacgacgcggcgctccgcgacggcaagctgccggggccgac 1144

                                                                
Query: 361  gtggcgaccgcagggtggtgtgcgctaccgcgagatcgccggcgctcaccgc 412
             ||||| || ||||| || || |||| | | |||||||||||||| ||||||
Sbjct: 1145 atggcggccccagggcggcgttcgcttcagtgagatcgccggcgcgcaccgc 1196
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  238 bits (120), Expect = 1e-59
 Identities = 339/412 (82%)
 Strand = Plus / Plus

                                                                            
Query: 1        caagctcctgctccgccgccgcacggccgccatggcggccctcgacgcgggcctcccagc 60
                |||||||||||||||||| ||| | |||||  ||||||| || ||||||| |||||| ||
Sbjct: 29286152 caagctcctgctccgccggcgcgccgccgcggtggcggcgctggacgcggacctccccgc 29286211

                                                                            
Query: 61       ggaggctgtccgccatttctccaagatactcgaggcacgccgtggcgtgctcccgcacac 120
                 ||||| || ||||||||||||||| | ||||| || || |||||||||||||||||| |
Sbjct: 29286212 cgaggccgtgcgccatttctccaaggtgctcgacgcgcggcgtggcgtgctcccgcaccc 29286271

                                                                            
Query: 121      cttcgccgccgcgtgcctcgtcggccgtgccgcctcgttccaggccggcgggcgcccagc 180
                 |||||  |||| |||||||||||||| ||||   || |||   || |||||||  ||||
Sbjct: 29286272 gttcgcgaccgcctgcctcgtcggccgcgccgaggcgctccgttccagcgggcgggcagc 29286331

                                                                            
Query: 181      agacgccatagcagattgcaaccgtgcgctggctctcgaccctgcgtacatcccggcgct 240
                 |||||||| || || |||||||| ||||| || || ||||| |||| ||||||||||||
Sbjct: 29286332 cgacgccatcgccgactgcaaccgcgcgctcgcgcttgacccggcgttcatcccggcgct 29286391

                                                                            
Query: 241      ccgcgcccgtgccgaccttcttcagtccgtgggggcgctcagcgattcccttcgtgacct 300
                 ||| | || |||||||||||  |||| || |||||||||||||| | ||| || |||||
Sbjct: 29286392 gcgctcgcgcgccgaccttctcgagtcggtaggggcgctcagcgactgcctccgcgacct 29286451

                                                                            
Query: 301      tgaccacctcaaacttctgtacgacgcggcgctccgtgacggcaagctgccggggcctag 360
                 || |||||||| || || ||||||||||||||||| |||||||||||||||||||| | 
Sbjct: 29286452 ggagcacctcaagctcctctacgacgcggcgctccgcgacggcaagctgccggggccgac 29286511

                                                                    
Query: 361      gtggcgaccgcagggtggtgtgcgctaccgcgagatcgccggcgctcaccgc 412
                 ||||| || ||||| || || |||| | | |||||||||||||| ||||||
Sbjct: 29286512 atggcggccccagggcggcgttcgcttcagtgagatcgccggcgcgcaccgc 29286563
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>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0597G07
          Length = 152928

 Score =  238 bits (120), Expect = 1e-59
 Identities = 339/412 (82%)
 Strand = Plus / Plus

                                                                         
Query: 1     caagctcctgctccgccgccgcacggccgccatggcggccctcgacgcgggcctcccagc 60
             |||||||||||||||||| ||| | |||||  ||||||| || ||||||| |||||| ||
Sbjct: 74841 caagctcctgctccgccggcgcgccgccgcggtggcggcgctggacgcggacctccccgc 74900

                                                                         
Query: 61    ggaggctgtccgccatttctccaagatactcgaggcacgccgtggcgtgctcccgcacac 120
              ||||| || ||||||||||||||| | ||||| || || |||||||||||||||||| |
Sbjct: 74901 cgaggccgtgcgccatttctccaaggtgctcgacgcgcggcgtggcgtgctcccgcaccc 74960

                                                                         
Query: 121   cttcgccgccgcgtgcctcgtcggccgtgccgcctcgttccaggccggcgggcgcccagc 180
              |||||  |||| |||||||||||||| ||||   || |||   || |||||||  ||||
Sbjct: 74961 gttcgcgaccgcctgcctcgtcggccgcgccgaggcgctccgttccagcgggcgggcagc 75020

                                                                         
Query: 181   agacgccatagcagattgcaaccgtgcgctggctctcgaccctgcgtacatcccggcgct 240
              |||||||| || || |||||||| ||||| || || ||||| |||| ||||||||||||
Sbjct: 75021 cgacgccatcgccgactgcaaccgcgcgctcgcgcttgacccggcgttcatcccggcgct 75080

                                                                         
Query: 241   ccgcgcccgtgccgaccttcttcagtccgtgggggcgctcagcgattcccttcgtgacct 300
              ||| | || |||||||||||  |||| || |||||||||||||| | ||| || |||||
Sbjct: 75081 gcgctcgcgcgccgaccttctcgagtcggtaggggcgctcagcgactgcctccgcgacct 75140

                                                                         
Query: 301   tgaccacctcaaacttctgtacgacgcggcgctccgtgacggcaagctgccggggcctag 360
              || |||||||| || || ||||||||||||||||| |||||||||||||||||||| | 
Sbjct: 75141 ggagcacctcaagctcctctacgacgcggcgctccgcgacggcaagctgccggggccgac 75200

                                                                 
Query: 361   gtggcgaccgcagggtggtgtgcgctaccgcgagatcgccggcgctcaccgc 412
              ||||| || ||||| || || |||| | | |||||||||||||| ||||||
Sbjct: 75201 atggcggccccagggcggcgttcgcttcagtgagatcgccggcgcgcaccgc 75252
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>dbj|AK071235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086P13, full
            insert sequence
          Length = 2221

 Score =  238 bits (120), Expect = 1e-59
 Identities = 339/412 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1    caagctcctgctccgccgccgcacggccgccatggcggccctcgacgcgggcctcccagc 60
            |||||||||||||||||| ||| | |||||  ||||||| || ||||||| |||||| ||
Sbjct: 802  caagctcctgctccgccggcgcgccgccgcggtggcggcgctggacgcggacctccccgc 861

                                                                        
Query: 61   ggaggctgtccgccatttctccaagatactcgaggcacgccgtggcgtgctcccgcacac 120
             ||||| || ||||||||||||||| | ||||| || || |||||||||||||||||| |
Sbjct: 862  cgaggccgtgcgccatttctccaaggtgctcgacgcgcggcgtggcgtgctcccgcaccc 921

                                                                        
Query: 121  cttcgccgccgcgtgcctcgtcggccgtgccgcctcgttccaggccggcgggcgcccagc 180
             |||||  |||| |||||||||||||| ||||   || |||   || |||||||  ||||
Sbjct: 922  gttcgcgaccgcctgcctcgtcggccgcgccgaggcgctccgttccagcgggcgggcagc 981

                                                                        
Query: 181  agacgccatagcagattgcaaccgtgcgctggctctcgaccctgcgtacatcccggcgct 240
             |||||||| || || |||||||| ||||| || || ||||| |||| ||||||||||||
Sbjct: 982  cgacgccatcgccgactgcaaccgcgcgctcgcgcttgacccggcgttcatcccggcgct 1041

                                                                        
Query: 241  ccgcgcccgtgccgaccttcttcagtccgtgggggcgctcagcgattcccttcgtgacct 300
             ||| | || |||||||||||  |||| || |||||||||||||| | ||| || |||||
Sbjct: 1042 gcgctcgcgcgccgaccttctcgagtcggtaggggcgctcagcgactgcctccgcgacct 1101

                                                                        
Query: 301  tgaccacctcaaacttctgtacgacgcggcgctccgtgacggcaagctgccggggcctag 360
             || |||||||| || || ||||||||||||||||| |||||||||||||||||||| | 
Sbjct: 1102 ggagcacctcaagctcctctacgacgcggcgctccgcgacggcaagctgccggggccgac 1161

                                                                
Query: 361  gtggcgaccgcagggtggtgtgcgctaccgcgagatcgccggcgctcaccgc 412
             ||||| || ||||| || || |||| | | |||||||||||||| ||||||
Sbjct: 1162 atggcggccccagggcggcgttcgcttcagtgagatcgccggcgcgcaccgc 1213
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  103 bits (52), Expect = 5e-19
 Identities = 127/152 (83%)
 Strand = Plus / Minus

                                                                            
Query: 1        caagctcctgctccgccgccgcacggccgccatggcggccctcgacgcgggcctcccagc 60
                |||||||| ||||||||| ||||| |||||  ||||||| || ||||||| |||||| ||
Sbjct: 24025175 caagctcccgctccgccggcgcaccgccgcggtggcggcgctggacgcggacctccccgc 24025116

                                                                            
Query: 61       ggaggctgtccgccatttctccaagatactcgaggcacgccgtggcgtgctcccgcacac 120
                 ||||| || ||||||||||||||| | ||||| ||  ||||||||| ||||||| || |
Sbjct: 24025115 cgaggccgtgcgccatttctccaaggtgctcgacgcgtgccgtggcgggctcccgtaccc 24025056

                                                
Query: 121      cttcgccgccgcgtgcctcgtcggccgtgccg 152
                 |||||  | || |||||||||||||||||||
Sbjct: 24025055 gttcgcgactgcctgcctcgtcggccgtgccg 24025024
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>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1476_F05
          Length = 125426

 Score =  103 bits (52), Expect = 5e-19
 Identities = 127/152 (83%)
 Strand = Plus / Minus

                                                                         
Query: 1     caagctcctgctccgccgccgcacggccgccatggcggccctcgacgcgggcctcccagc 60
             |||||||| ||||||||| ||||| |||||  ||||||| || ||||||| |||||| ||
Sbjct: 60213 caagctcccgctccgccggcgcaccgccgcggtggcggcgctggacgcggacctccccgc 60154

                                                                         
Query: 61    ggaggctgtccgccatttctccaagatactcgaggcacgccgtggcgtgctcccgcacac 120
              ||||| || ||||||||||||||| | ||||| ||  ||||||||| ||||||| || |
Sbjct: 60153 cgaggccgtgcgccatttctccaaggtgctcgacgcgtgccgtggcgggctcccgtaccc 60094

                                             
Query: 121   cttcgccgccgcgtgcctcgtcggccgtgccg 152
              |||||  | || |||||||||||||||||||
Sbjct: 60093 gttcgcgactgcctgcctcgtcggccgtgccg 60062
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>ref|NM_187867.1| Oryza sativa (japonica cultivar-group), Ozsa8311 predicted mRNA
          Length = 801

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 121 cttcgccgccgcgtgcctcgtcggc 145
           |||||||| ||||||||||||||||
Sbjct: 582 cttcgccgtcgcgtgcctcgtcggc 606
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 25      ggccgccatggcggccctcga 45
               |||||||||||||||||||||
Sbjct: 1019452 ggccgccatggcggccctcga 1019432
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>ref|XM_843976.1| PREDICTED: Canis familiaris hypothetical protein LOC607351
           (LOC607351), mRNA
          Length = 795

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                        
Query: 5   ctcctgctccgcc-gccgcacggccgcca 32
           ||||||||||||| |||||||||||||||
Sbjct: 270 ctcctgctccgcctgccgcacggccgcca 242
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 121     cttcgccgccgcgtgcctcgtcggc 145
               |||||||| ||||||||||||||||
Sbjct: 8344265 cttcgccgtcgcgtgcctcgtcggc 8344289



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 12       tccgccgccgcacggccgcc 31
                ||||||||||||||||||||
Sbjct: 41354901 tccgccgccgcacggccgcc 41354882
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 234     cggcgctccgcgcccgtgccg 254
               |||||||||||||||||||||
Sbjct: 1545067 cggcgctccgcgcccgtgccg 1545047



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 27      ccgccatggcggccctcgacgcgg 50
               |||||||||||||| |||||||||
Sbjct: 3942422 ccgccatggcggccttcgacgcgg 3942445
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 29     gccatggcggccctcgacgcg 49
              |||||||||||||||||||||
Sbjct: 365052 gccatggcggccctcgacgcg 365072



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 326    gcggcgctccgtgacggcaagctg 349
              ||||||||||| ||||||||||||
Sbjct: 997538 gcggcgctccgggacggcaagctg 997561
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>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0434D08
          Length = 161266

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 121    cttcgccgccgcgtgcctcgtcggc 145
              |||||||| ||||||||||||||||
Sbjct: 138196 cttcgccgtcgcgtgcctcgtcggc 138220
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>dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
            clone:P0503G09
          Length = 59843

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 121  cttcgccgccgcgtgcctcgtcggc 145
            |||||||| ||||||||||||||||
Sbjct: 8891 cttcgccgtcgcgtgcctcgtcggc 8915
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>dbj|AB070957.1| Streptomyces avermitilis peptide-8 biosynthetic gene cluster
          Length = 14219

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 234  cggcgctccgcgcccgtgccg 254
            |||||||||||||||||||||
Sbjct: 2065 cggcgctccgcgcccgtgccg 2045
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>ref|XM_479759.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1348

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 16  ccgccgcacggccgccatggcggc 39
           ||||||| ||||||||||||||||
Sbjct: 363 ccgccgctcggccgccatggcggc 340
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>ref|NM_187686.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 936

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 3   agctcctgctccgccgccgc 22
           ||||||||||||||||||||
Sbjct: 620 agctcctgctccgccgccgc 639
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>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940117D9, complete sequence
          Length = 143368

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 321   acgacgcggcgctccgtgacggca 344
             ||||||||||||||| ||||||||
Sbjct: 37058 acgacgcggcgctccttgacggca 37081
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>gb|DQ145245.1| Drosophila miranda neo-Y Ih gene, partial sequence
          Length = 1202

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 agtccgtgggggcgctcagc 283
           ||||||||||||||||||||
Sbjct: 77  agtccgtgggggcgctcagc 96
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>gb|DQ145244.1| Drosophila miranda neo-X Ih gene, partial sequence
          Length = 1214

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 agtccgtgggggcgctcagc 283
           ||||||||||||||||||||
Sbjct: 77  agtccgtgggggcgctcagc 96
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>ref|XM_804612.1| Trypanosoma cruzi strain CL Brener translation initiation factor
           eIF-2B beta subunit (Tc00.1047053506865.40) partial mRNA
          Length = 1560

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 166 cggcgggcgcccagcagacg 185
           ||||||||||||||||||||
Sbjct: 763 cggcgggcgcccagcagacg 782
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>ref|XM_809883.1| Trypanosoma cruzi strain CL Brener translation initiation factor
           eIF-2B beta subunit (Tc00.1047053509569.50) partial mRNA
          Length = 1560

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 166 cggcgggcgcccagcagacg 185
           ||||||||||||||||||||
Sbjct: 763 cggcgggcgcccagcagacg 782
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>emb|AL590235.23| Human DNA sequence from clone RP11-529E10 on chromosome 4, complete
             sequence
          Length = 159246

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   agctgccggggcctaggtgg 364
             ||||||||||||||||||||
Sbjct: 99559 agctgccggggcctaggtgg 99540
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>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09,
             complete sequence
          Length = 146568

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     agctcctgctccgccgccgc 22
             ||||||||||||||||||||
Sbjct: 39469 agctcctgctccgccgccgc 39450
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>gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0072A12,
              complete sequence
          Length = 149347

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     cgccgcacggccgccatggc 36
              ||||||||||||||||||||
Sbjct: 136018 cgccgcacggccgccatggc 135999
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 17      cgccgcacggccgccatggc 36
               ||||||||||||||||||||
Sbjct: 2763904 cgccgcacggccgccatggc 2763923
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 17       cgccgcacggccgccatggc 36
                ||||||||||||||||||||
Sbjct: 14663556 cgccgcacggccgccatggc 14663537
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 16     ccgccgcacggccgccatggcggc 39
              ||||||| ||||||||||||||||
Sbjct: 715156 ccgccgctcggccgccatggcggc 715179
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>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0432C03
          Length = 164394

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    tccgccgccgcacggccgcc 31
             ||||||||||||||||||||
Sbjct: 46394 tccgccgccgcacggccgcc 46375
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>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0427G12
          Length = 185545

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 16    ccgccgcacggccgccatggcggc 39
             ||||||| ||||||||||||||||
Sbjct: 14376 ccgccgctcggccgccatggcggc 14399
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>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0498H04
          Length = 151046

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 16     ccgccgcacggccgccatggcggc 39
              ||||||| ||||||||||||||||
Sbjct: 142534 ccgccgctcggccgccatggcggc 142557
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>dbj|AK111245.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-D05, full
           insert sequence
          Length = 1348

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 16  ccgccgcacggccgccatggcggc 39
           ||||||| ||||||||||||||||
Sbjct: 363 ccgccgctcggccgccatggcggc 340
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 33      tggcggccctcgacgcgggc 52
               ||||||||||||||||||||
Sbjct: 1388673 tggcggccctcgacgcgggc 1388654
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 17       cgccgcacggccgccatggc 36
                ||||||||||||||||||||
Sbjct: 14671797 cgccgcacggccgccatggc 14671778
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>emb|Z69362.1|HSL241B9A Human DNA sequence from clone LA04NC01-241B9 on chromosome 4,
            complete sequence
          Length = 5867

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  agctgccggggcctaggtgg 364
            ||||||||||||||||||||
Sbjct: 2182 agctgccggggcctaggtgg 2201
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>gb|U09991.1|SVU09991 Streptomyces venezuelae ISP5230 chloramphenicol resistance protein
            (cmlv) and chloramphenicol phosphotransferase genes,
            complete cds
          Length = 2355

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   ggcggccctcgacgcgggcc 53
            ||||||||||||||||||||
Sbjct: 1977 ggcggccctcgacgcgggcc 1996
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>dbj|AB070952.1| Streptomyces avermitilis peptide-3 biosynthetic gene cluster
          Length = 23451

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 27  ccgccatggcggccctcgacgcgg 50
           |||||||||||||| |||||||||
Sbjct: 740 ccgccatggcggccttcgacgcgg 717
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>emb|AL805895.4| Mouse DNA sequence from clone RP23-64K11 on chromosome 4, complete
             sequence
          Length = 154245

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    gggcctcccagcggaggctg 68
             ||||||||||||||||||||
Sbjct: 90245 gggcctcccagcggaggctg 90226


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,323,946
Number of Sequences: 3902068
Number of extensions: 2323946
Number of successful extensions: 51913
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 50680
Number of HSP's gapped (non-prelim): 1234
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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