ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet16g11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
17SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Co... 78 1e-14
27SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) ... 77 2e-14
3NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor ... 46 5e-05
4NEP2_NEPGR (Q766C2) Aspartic proteinase nepenthesin-2 precursor ... 35 0.11
5RL10_HALSA (Q9HSS4) 50S ribosomal protein L10e 30 2.8
6MYO9B_HUMAN (Q13459) Myosin-9B (Myosin IXb) (Unconventional myos... 30 2.8
7STAN_DROME (Q9V5N8) Protocadherin-like wing polarity protein sta... 30 3.7
8YAG1_SCHPO (Q09866) Hypothetical WD-repeat protein C12G12.01c in... 30 3.7
9DISA_TRIGA (P15503) Putative venom metalloproteinase precursor (... 30 3.7
10CARPV_CANAL (P10977) Vacuolar aspartic protease precursor (EC 3.... 29 4.8
11CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor 28 8.2
12CI010_HUMAN (Q9NZB2) Protein C9orf10 28 8.2
13MATN3_HUMAN (O15232) Matrilin-3 precursor 28 8.2

>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic|
           7S globulin high-kDa subunit; Basic 7S globulin low-kDa
           subunit]
          Length = 427

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 41/110 (37%), Positives = 59/110 (53%)
 Frame = +2

Query: 119 VVLPVRKDSATGQYLTGFRQRTPQVPVTAVLDLGGASLWVDCDAGYVSSSYAGVPCASKL 298
           VVLPV+ D +TG +    ++RTP + V  ++DL G  LWV+C+  Y S +Y    C S  
Sbjct: 34  VVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQ 93

Query: 299 CRLAKSVACATSCVGKPSPGCLNDTCSGFPENTVTRVSTGGNLITDVLSV 448
           C  A +  C  SC     PGC  +TC     N +T+ +  G L  DVL++
Sbjct: 94  CSRANTHQC-LSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAI 142



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>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:|
           Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin
           2 low-kDa subunit]
          Length = 433

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 40/110 (36%), Positives = 60/110 (54%)
 Frame = +2

Query: 119 VVLPVRKDSATGQYLTGFRQRTPQVPVTAVLDLGGASLWVDCDAGYVSSSYAGVPCASKL 298
           +VLPV+ D++TG +    ++RTP + V  ++DL G  LWV+C+  Y S +Y    C S  
Sbjct: 41  LVLPVQNDASTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQHYSSKTYQAPFCHSTQ 100

Query: 299 CRLAKSVACATSCVGKPSPGCLNDTCSGFPENTVTRVSTGGNLITDVLSV 448
           C  A +  C  SC     PGC  +TC     N +T+ +  G L  DVL++
Sbjct: 101 CSRANTHQC-LSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGQDVLAI 149



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>NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-)|
           (Nepenthesin-I)
          Length = 437

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 16/126 (12%)
 Frame = +2

Query: 104 NNPSAVVLPVRKDSATGQYLTGFRQRTPQVPVTAVLDLGGASLWVDCDA----------- 250
           N PS V   V   +  G+YL      TP  P +A++D G   +W  C             
Sbjct: 79  NGPSGVETSVY--AGDGEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQCFNQSTPI 136

Query: 251 --GYVSSSYAGVPCASKLCRLAKSVACATSCVGKPSPGCLNDTCS---GFPENTVTRVST 415
                SSS++ +PC+S+LC+               SP C N+ C    G+ + + T+ S 
Sbjct: 137 FNPQGSSSFSTLPCSSQLCQALS------------SPTCSNNFCQYTYGYGDGSETQGSM 184

Query: 416 GGNLIT 433
           G   +T
Sbjct: 185 GTETLT 190



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>NEP2_NEPGR (Q766C2) Aspartic proteinase nepenthesin-2 precursor (EC 3.4.23.-)|
           (Nepenthesin-II)
          Length = 438

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 13/71 (18%)
 Frame = +2

Query: 152 GQYLTGFRQRTPQVPVTAVLDLGGASLWVDCDA-------------GYVSSSYAGVPCAS 292
           G+YL      TP    +A++D G   +W  C+                 SSS++ +PC S
Sbjct: 94  GEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQCFSQPTPIFNPQDSSSFSTLPCES 153

Query: 293 KLCRLAKSVAC 325
           + C+   S  C
Sbjct: 154 QYCQDLPSETC 164



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>RL10_HALSA (Q9HSS4) 50S ribosomal protein L10e|
          Length = 176

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = +1

Query: 304 PREECGLRHQLRRQAVPGVSERHL*RVPGEHRHARQHRREPH-----HRRAVGA 450
           P+EEC LRH    +A    + RHL +  GE  +  Q R+ PH     +++A GA
Sbjct: 54  PQEECQLRHG-SLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGA 106



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>MYO9B_HUMAN (Q13459) Myosin-9B (Myosin IXb) (Unconventional myosin-9b)|
          Length = 2158

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = -3

Query: 313 LREAAQLXXXXXXXXXXXXVPGVAVHPE---RGASKVEHGRHRDLGRSLPEARQVLP 152
           LREA +L             PG   HPE   RGAS      +RDL   + ++ + LP
Sbjct: 698 LREAGRLRAERAEKAAGMSSPGAQSHPEELPRGASTPSEKLYRDLHNQMIKSIKGLP 754



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>STAN_DROME (Q9V5N8) Protocadherin-like wing polarity protein stan precursor|
            (Protein starry night) (Protein flamingo)
          Length = 3574

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +2

Query: 239  DCDAGYVSSSYAGV----PCASKLCRLAKSVACATSC 337
            +CD+GYV +  A +    PCAS +CR   S+     C
Sbjct: 1989 ECDSGYVGTDCAPICTVRPCASGVCRANTSLPRGYDC 2025



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>YAG1_SCHPO (Q09866) Hypothetical WD-repeat protein C12G12.01c in chromosome I|
          Length = 905

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 232 ERGASKVEHGRHRDLGRSLPEARQVLPRCAV 140
           +RG SK    +H  LG+S P   Q LP+C+V
Sbjct: 802 QRGVSKAGPAKH--LGKSCPHCGQPLPKCSV 830



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>DISA_TRIGA (P15503) Putative venom metalloproteinase precursor (EC 3.4.24.-)|
           [Contains: Disintegrin trigramin-alpha (Platelet
           aggregation activation inhibitor)]
          Length = 480

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/63 (31%), Positives = 25/63 (39%)
 Frame = +2

Query: 239 DCDAGYVSSSYAGVPCASKLCRLAKSVACATSCVGKPSPGCLNDTCSGFPENTVTRVSTG 418
           DCD G    S A   C +  C+L     C          G   D CS   E TV R++ G
Sbjct: 412 DCDCG----SPANPCCDAATCKLIPGAQCGE--------GLCCDQCSFIEEGTVCRIARG 459

Query: 419 GNL 427
            +L
Sbjct: 460 DDL 462



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>CARPV_CANAL (P10977) Vacuolar aspartic protease precursor (EC 3.4.23.-)|
           (Aspartate protease) (ACP)
          Length = 419

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +2

Query: 155 QYLTGFRQRTPQVPVTAVLDLGGASLWV---DC 244
           QY T  +  TP  P   +LD G ++LWV   DC
Sbjct: 103 QYFTEIQIGTPGQPFKVILDTGSSNLWVPSQDC 135



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>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 109  PERRGAAGEEGQRNGAVPDGLPAANAPGPGD 201
            P ++G  GE+G +    P GLP    P PGD
Sbjct: 1243 PGKKGPPGEDGAKGSVGPTGLPGDLGP-PGD 1272



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>CI010_HUMAN (Q9NZB2) Protein C9orf10|
          Length = 1069

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 110 PSAVVLPVRKDSATGQYLTGFRQRTPQVPVTAVLD 214
           PSAVV    +  A G  + G RQR PQ P+  ++D
Sbjct: 15  PSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLVD 49



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>MATN3_HUMAN (O15232) Matrilin-3 precursor|
          Length = 486

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 112 ERRGAAGEEGQR-NGAVPDGLPAANAPGPG 198
           E RG  G  G+R + A PDG PA+    PG
Sbjct: 40  ETRGPGGSPGRRPSPAAPDGAPASGTSEPG 69


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,766,128
Number of Sequences: 219361
Number of extensions: 947833
Number of successful extensions: 4205
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4192
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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