| Clone Name | baet16g02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein | 44 | 1e-04 | 2 | CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... | 35 | 0.075 | 3 | 14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor | 33 | 0.29 |
|---|
>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein| Length = 346 Score = 44.3 bits (103), Expect = 1e-04 Identities = 19/41 (46%), Positives = 22/41 (53%) Frame = +1 Query: 304 CPVDVLKLVACVDXXXXXXXXXXXXXXSETCCPLLSGVADL 426 CP+D LKL ACVD +TCCPLL G+ DL Sbjct: 261 CPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDL 301
>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific| protein ZRP3) Length = 129 Score = 35.0 bits (79), Expect = 0.075 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +1 Query: 298 GKCPVDVLKLVACVDXXXXXXXXXXXXXXSETCCPLLSGVADL 426 G+CP+D LKL C E CCPLL G+ DL Sbjct: 46 GRCPIDALKLKVCAKVLGLVKVGLPQY---EQCCPLLEGLVDL 85
>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor| Length = 137 Score = 33.1 bits (74), Expect = 0.29 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = +1 Query: 298 GKCPVDVLKLVACVDXXXXXXXXXXXXXXSETCCPLLSGVADL 426 GKCP D LKL C D + CC LL G+ +L Sbjct: 52 GKCPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNL 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,593,954 Number of Sequences: 219361 Number of extensions: 163186 Number of successful extensions: 329 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 324 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 328 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)