ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet16e07 |
|---|---|
| Clone Library Name | barley_pub |
>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein| At2g36320 Length = 161 Score = 65.9 bits (159), Expect = 2e-11 Identities = 27/53 (50%), Positives = 39/53 (73%) Frame = +1 Query: 124 KEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDS 282 +E C+ PEG LCVNNCGFFGS+ATMN+CS C+ ++ +K++Q S+ +S Sbjct: 3 EEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVES 55
>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein| At1g12440 Length = 168 Score = 54.7 bits (130), Expect = 5e-08 Identities = 23/58 (39%), Positives = 35/58 (60%) Frame = +1 Query: 118 EHKEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDSIVN 291 E ++ P P LCV CGFFGS + MN+CSKC++++ EEQ A ++ + +N Sbjct: 4 EQNDSTSFSPSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLN 61
>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein| At4g12040 Length = 175 Score = 51.2 bits (121), Expect = 6e-07 Identities = 20/43 (46%), Positives = 30/43 (69%) Frame = +1 Query: 145 PEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASS 273 P P LC N CGFFGS + MN+CSKC++ + +E+Q +A ++ Sbjct: 13 PTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAA 55
>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 44.3 bits (103), Expect = 7e-05 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = +1 Query: 142 QPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQA 255 Q GP+LC CGF+G+ T MCS C+KE + +++ + Sbjct: 7 QTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS 44
>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 44.3 bits (103), Expect = 7e-05 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = +1 Query: 142 QPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQA 255 Q GP+LC CGF+G+ T MCS C+KE + +++ + Sbjct: 7 QTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS 44
>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 39.3 bits (90), Expect = 0.002 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = +1 Query: 127 EAGCQQPEGPILCVN-NCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDS 282 +AG ++ + P L CGF+GS+ TMN+CSKC + K+ A S+ +S Sbjct: 3 DAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNS 55
>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog| Length = 226 Score = 38.1 bits (87), Expect = 0.005 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +1 Query: 175 CGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDS 282 CGF+GS+ TMN+CSKC + K+ A S+ S Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDEDTAPSTSSS 55
>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 37.7 bits (86), Expect = 0.007 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Frame = +1 Query: 127 EAGCQQPEGPILCVN-NCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDS 282 +AG ++ + P L CGF+GS+ TMN+CSKC + K+ S+ +S Sbjct: 3 DAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNS 55
>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 37.7 bits (86), Expect = 0.007 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Frame = +1 Query: 127 EAGCQQPEGPILCVN-NCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDS 282 +AG ++ + P L CGF+GS+ TMN+CSKC + K+ S+ +S Sbjct: 3 DAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNS 55
>RABX5_BOVIN (O18973) Rab5 GDP/GTP exchange factor (Rabex-5)| Length = 492 Score = 37.4 bits (85), Expect = 0.009 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +1 Query: 115 MEHKEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKL 261 ++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 3 LKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQI 51
>RABX5_HUMAN (Q9UJ41) Rab5 GDP/GTP exchange factor (Rabaptin 5-associated| exchange factor for Rab5) (Rabex-5) Length = 708 Score = 37.4 bits (85), Expect = 0.009 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +1 Query: 115 MEHKEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKL 261 ++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 141 LKSERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQI 189
>RABX5_MOUSE (Q9JM13) Rab5 GDP/GTP exchange factor (Rabex-5)| Length = 491 Score = 37.4 bits (85), Expect = 0.009 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +1 Query: 115 MEHKEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKL 261 ++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 3 LKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQRQI 51
>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1| (Stress-associated protein 1) (OsISAP1) Length = 164 Score = 34.7 bits (78), Expect = 0.056 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 160 LCVNNCGFFGSAATMNMCSKC 222 LC N+CGF G+ AT N+C C Sbjct: 21 LCANSCGFPGNPATQNLCQNC 41
>CEZ2_MOUSE (Q8R554) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 33.9 bits (76), Expect = 0.095 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +1 Query: 172 NCGFFGSAATMNMCSKCHKEMVMKEEQAKLA 264 NC F+G A T + CS C++E + + +A+ A Sbjct: 894 NCAFYGRAETEHFCSYCYREELRRRREARAA 924
>CEZ1_HUMAN (Q6GQQ9) Zinc finger A20 domain-containing protein 1 (EC 3.-.-.-)| (Cellular zinc finger anti-NF-kappa B protein) (Zinc finger protein Cezanne) Length = 843 Score = 32.7 bits (73), Expect = 0.21 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +1 Query: 136 CQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQ 252 C+QP NC F+G T N CS C++E + + E+ Sbjct: 802 CKQP--------NCSFYGHPETNNFCSCCYREELRRRER 832
>CEZ2_HUMAN (Q8TE49) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 32.3 bits (72), Expect = 0.28 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 172 NCGFFGSAATMNMCSKCHKEMVMKEEQAK 258 NC F+G A T + CS C++E + + +A+ Sbjct: 894 NCAFYGRAETEHYCSYCYREELRRRREAR 922
>AQP12_MOUSE (Q8CHJ2) Aquaporin-12A (AQP-12)| Length = 290 Score = 31.6 bits (70), Expect = 0.47 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Frame = -2 Query: 254 ACSSFMTISLWHLEHMFMVAALPKKPQLLT---HRIGP--SGCWQPASLCSILNNC 102 AC+ F +SL HL+H +V +P L+T + GP S + PA S+ +C Sbjct: 168 ACTFFFHLSLLHLQHSLLVYRVPALALLVTLMAYTAGPYTSAFFNPALAASVTFHC 223
>ORDL_HAEIN (P44732) Probable oxidoreductase ordL (EC 1.-.-.-)| Length = 431 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = +1 Query: 142 QPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKLAAS--SFDSIVNGGDGG 306 Q E +CV GFFG +A + + K K +V++ + AS S +NG + G Sbjct: 29 QIEHADVCVIGAGFFGLSAALELAEKGKKVIVLEGARVGFGASGRSGGQAINGFEEG 85
>YAK1_YEAST (P14680) Dual specificity protein kinase YAK1 (EC 2.7.12.1)| Length = 807 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = -1 Query: 369 VNLSNRHLSARSHSRNNNRCFPTVATVNNAIKGGG 265 +N SN + S+ S+S NN PT+ T ++A G G Sbjct: 1 MNSSNNNDSSSSNSNMNNSLSPTLVTHSDASMGSG 35
>RTN4_RAT (Q9JK11) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)| (Foocen) (Glut4 vesicle 20 kDa protein) Length = 1163 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = -1 Query: 405 NISSRLHNECLHVNLSNRHLSARSHSRNNNRCFPT 301 N+ S++ +CL +L + L S RN + FP+ Sbjct: 394 NVESKVDRKCLEDSLEQKSLGKDSEGRNEDASFPS 428
>GGPPS_CATRO (Q42698) Geranylgeranyl pyrophosphate synthetase, chloroplast| precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] Length = 357 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +1 Query: 154 PILCVNNCGFFGSAATMNMCSKCHKEMV 237 P+LC+ C FG ++ M S C EM+ Sbjct: 110 PMLCIAACELFGGTESVAMPSACAVEMI 137
>CAPP2_CHLRE (Q6R2V6) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEP| carboxylase 2) (PEPCase 2) (PEPC 2) Length = 1221 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = +3 Query: 105 VVQDGTQGGGLPAARGP 155 VV DGT GGG AA GP Sbjct: 371 VVADGTSGGGAAAAAGP 387
>URE2_SACBA (Q8NJR6) Protein URE2| Length = 345 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/48 (29%), Positives = 23/48 (47%) Frame = -1 Query: 405 NISSRLHNECLHVNLSNRHLSARSHSRNNNRCFPTVATVNNAIKGGGS 262 N S L N VN+ NR+ + + N N FP+ NN+++ + Sbjct: 7 NQVSNLSNALRQVNIGNRNSNTTTDQSNINFEFPSGVNSNNSVQNSNN 54
>PCSK6_HUMAN (P29122) Proprotein convertase subtilisin/kexin type 6 precursor| (EC 3.4.21.-) (Paired basic amino acid cleaving enzyme 4) (Subtilisin/kexin-like protease PACE4) (Subtilisin-like proprotein convertase 4) (SPC4) Length = 969 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = -2 Query: 305 PPSPPLTMLSKEEAASLACSSFMTISLWHLEHMFMVAAL--PKKPQLLTHRIGPSG 144 P S PL + + A + AC+ + +LEH+ + ++ P++ L + + PSG Sbjct: 510 PRSIPLVQVLRTTALTSACAEHSDQRVVYLEHVVVRTSISHPRRGDLQIYLVSPSG 565 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.131 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,731,457 Number of Sequences: 219361 Number of extensions: 661988 Number of successful extensions: 1910 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1855 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1910 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
