>3MG1_ECOLI (P05100) DNA-3-methyladenine glycosylase 1 (EC 3.2.2.20)|
           (DNA-3-methyladenine glycosylase I) (3-methyladenine-DNA
           glycosylase I, constitutive) (TAG I)
           (DNA-3-methyladenine glycosidase I)
          Length = 187

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 21/47 (44%), Positives = 31/47 (65%)
 Frame = +1

Query: 313 KRCSFITAYSDPVYVVYHDEEWGLPVHEDELLFEMLTLSGVQVGADW 453
           +RC +++   DP+Y+ YHD EWG+P  + + LFEM+ L G Q G  W
Sbjct: 2   ERCGWVS--QDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSW 46

>GUAA_HELHP (Q7VG78) Probable GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 1375

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
 Frame = +1

Query: 307 EEKRCSFITAYSDP---VYVVYHDEEWGLPVHEDELLFEMLTLSGVQVGADW 453
           E+ RC++ T   +    +Y  YHD EWG P+HED+ LFE L L G Q G  W
Sbjct: 784 EKVRCAWATDKDEAARKLYEDYHDTEWGEPLHEDKKLFEHLVLEGFQAGLSW 835

>3MGA_HAEIN (P44321) DNA-3-methyladenine glycosylase (EC 3.2.2.20)|
           (3-methyladenine-DNA glycosidase) (TAG)
          Length = 185

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +1

Query: 316 RCSFITAYSDPVYVVYHDEEWGLPVHEDELLFEMLTLSGVQVGADW 453
           RC ++   S  +Y+ YHD+EWG P  + + LFE + L G Q G  W
Sbjct: 4   RCPWVGEQS--IYIDYHDKEWGKPEFDSQKLFEKICLEGQQAGLSW 47

>AMP12_ENCCU (Q8SRG3) Probable M1-family aminopeptidase 2 (EC 3.4.11.-)|
          Length = 864

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 352 YVVYHDEEWGLPVHEDELLFEMLTLSGVQVGAD 450
           YVV H EE  L VH++ +L+ M+ +S   V  D
Sbjct: 780 YVVSHGEELYLMVHKNAMLYNMIIMSLRHVSGD 812

>AMP11_ENCCU (Q8SQI6) Probable M1-family aminopeptidase 1 (EC 3.4.11.-)|
          Length = 864

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 352 YVVYHDEEWGLPVHEDELLFEMLTLSGVQVGAD 450
           YVV H EE  L VH++ +L+ M+ +S   V  D
Sbjct: 780 YVVSHGEELYLMVHKNAMLYNMIIMSLRHVSGD 812

>ATG4_YARLI (Q6CH28) Probable cysteine protease ATG4 (EC 3.4.22.-)|
           (Autophagy-related protein 4)
          Length = 545

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +1

Query: 337 YSDPVYVVYHDEEWGLPVHEDELL---FEMLTLSGVQVGAD 450
           + D    VY++   G  V+EDELL   F +L L G+++G D
Sbjct: 238 FPDSGLKVYYNGNGGGDVYEDELLETGFPLLVLCGLRLGID 278


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,185,437
Number of Sequences: 219361
Number of extensions: 410140
Number of successful extensions: 1387
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1387
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)