Clone Information

BLAST Search Result

Clone Name	baet16d03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloropl...	253	2e-67
2	PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloropl...	192	3e-49
3	PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloropl...	191	5e-49
4	PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplas...	186	2e-47
5	PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloropl...	186	2e-47
6	PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloropl...	184	1e-46
7	PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chlor...	180	1e-45
8	PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chlor...	171	1e-42
9	PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloropl...	168	6e-42
10	PSBO_BRARA (P83504) Oxygen-evolving enhancer protein 1, chloropl...	67	2e-11
11	PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloropl...	66	4e-11
12	PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloropl...	64	2e-10
13	PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloropl...	60	2e-09
14	PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypep...	36	0.049
15	PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypep...	36	0.049
16	LRFN4_HUMAN (Q6PJG9) Leucine-rich repeat and fibronectin type-II...	35	0.065
17	5E5_RAT (Q63003) 5E5 antigen	34	0.14
18	CHS4_NEUCR (Q01285) Chitin synthase 4 (EC 2.4.1.16) (Chitin-UDP ...	33	0.25
19	PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypep...	33	0.25
20	CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor	33	0.42
21	CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor	32	0.55
22	LRFN4_MOUSE (Q80XU8) Leucine-rich repeat and fibronectin type-II...	32	0.71
23	ZDH18_HUMAN (Q9NUE0) Palmitoyltransferase ZDHHC18 (EC 2.3.1.-) (...	32	0.93
24	CTAG2_HUMAN (O75638) Cancer/testis antigen 2 (L antigen family m...	31	1.2
25	PG34_MYCTU (Q50594) Hypothetical PE-PGRS family protein PE_PGRS34	31	1.6
26	VNUA_PRVKA (P33485) Probable nuclear antigen	31	1.6
27	CRUM2_HUMAN (Q5IJ48) Crumbs homolog 2 precursor (Crumbs-like pro...	30	2.1
28	FA21C_PONPY (Q5RDC1) Protein FAM21C	30	2.1
29	CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor	30	2.1
30	LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related pr...	30	2.1
31	LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related pr...	30	2.1
32	ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing pro...	30	2.1
33	GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding f...	30	2.7
34	CAF1_EPHMU (P18856) Collagen EMF1-alpha precursor (Fibrillar col...	30	2.7
35	FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related p...	30	2.7
36	CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor	30	2.7
37	IGSF8_MOUSE (Q8R366) Immunoglobulin superfamily member 8 precurs...	30	2.7
38	TRPE2_HALSA (Q9HS66) Anthranilate synthase component 1 2 (EC 4.1...	30	2.7
39	CRP_MOUSE (P14847) C-reactive protein precursor	30	2.7
40	AVEN_HUMAN (Q9NQS1) Cell death regulator Aven	30	2.7
41	XYNA_ASPKA (P33559) Endo-1,4-beta-xylanase A precursor (EC 3.2.1...	30	3.5
42	SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)	30	3.5
43	FA21C_HUMAN (Q9Y4E1) Protein FAM21C	30	3.5
44	KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C...	30	3.5
45	YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon ...	27	3.8
46	SMC1A_XENLA (O93308) Structural maintenance of chromosome 1 prot...	29	4.6
47	SMC1A_RAT (Q9Z1M9) Structural maintenance of chromosome 1-like 1...	29	4.6
48	SMC1A_MOUSE (Q9CU62) Structural maintenance of chromosome 1-like...	29	4.6
49	SMC1A_HUMAN (Q14683) Structural maintenance of chromosome 1-like...	29	4.6
50	SMC1A_BOVIN (O97593) Structural maintenance of chromosome 1-like...	29	4.6
51	IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2	29	4.6
52	RP1L1_MOUSE (Q8CGM2) Retinitis pigmentosa 1-like 1 protein (Reti...	29	4.6
53	ADRB1_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1 adrenoce...	29	4.6
54	SPEG_HUMAN (Q15772) Striated muscle preferentially expressed pro...	29	6.0
55	VGLD_BHV1P (P24906) Glycoprotein D precursor (Glycoprotein IV)	29	6.0
56	RBL_XANFL (P23011) Ribulose bisphosphate carboxylase large chain...	29	6.0
57	THIC_RHOPA (P61427) Thiamine biosynthesis protein thiC	29	6.0
58	GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outg...	29	6.0
59	RPOB_DECAR (Q47JB0) DNA-directed RNA polymerase beta chain (EC 2...	28	7.9
60	OCD1_RHIME (P58338) Ornithine cyclodeaminase 1 (EC 4.3.1.12) (OC...	28	7.9
61	HIS4_CORDI (P60580) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylami...	28	7.9
62	CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)	28	7.9
63	VGLD_BHV1S (Q08100) Glycoprotein D precursor (Glycoprotein IV)	28	7.9
64	NH103_CAEEL (O16359) Nuclear hormone receptor family member nhr-103	28	7.9
65	ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC...	28	7.9
66	34KD_MYCTU (P65637) 34 kDa antigenic protein homolog	28	7.9
67	34KD_MYCBO (P65638) 34 kDa antigenic protein homolog	28	7.9
68	RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine syntha...	28	7.9

>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 325

 Score =  253 bits (645), Expect = 2e-67
 Identities = 128/132 (96%), Positives = 130/132 (98%)
 Frame = +1

Query: 49  MAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCADAA 228
           MAASLQAAAT+MPAKIGGRASS RPSSHVARAFGVDA ARITCSLQSDIREVASKCADAA
Sbjct: 1   MAASLQAAATVMPAKIGGRASSARPSSHVARAFGVDAGARITCSLQSDIREVASKCADAA 60

Query: 229 KMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSFPF 408
           KMAGFALATSALLVSGA+AEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSFPF
Sbjct: 61  KMAGFALATSALLVSGATAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSFPF 120

Query: 409 KAGKYEMKKFCL 444
           KAGKYEMKKFCL
Sbjct: 121 KAGKYEMKKFCL 132

to top

>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  192 bits (488), Expect = 3e-49
 Identities = 94/135 (69%), Positives = 116/135 (85%), Gaps = 3/135 (2%)
 Frame = +1

Query: 49  MAASLQAAATLMPAKIGGRASS-VRPSSHVARAFGVD--AAARITCSLQSDIREVASKCA 219
           MA+SLQAAATL+PAK+G  A + +R +SH+++AFG D   A R+TCS+ SD+R++A KC 
Sbjct: 1   MASSLQAAATLIPAKVGAPARTHLRSNSHLSKAFGFDNSTAGRLTCSINSDLRDIAQKCT 60

Query: 220 DAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDS 399
           DAAK+AGFALATSAL++SGASAEG PKRLTFDEIQSKTYMEVKG+GTANQCPTI+GG +S
Sbjct: 61  DAAKLAGFALATSALVISGASAEGVPKRLTFDEIQSKTYMEVKGSGTANQCPTIEGGTES 120

Query: 400 FPFKAGKYEMKKFCL 444
           F +K GKY +KK CL
Sbjct: 121 FGYKTGKYTLKKLCL 135

to top

>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 333

 Score =  191 bits (486), Expect = 5e-49
 Identities = 99/138 (71%), Positives = 118/138 (85%), Gaps = 6/138 (4%)
 Frame = +1

Query: 49  MAASLQAAATLM-PAKIGGRAS----SVRPSSHVARAFGVD-AAARITCSLQSDIREVAS 210
           MAASLQAAATLM P K+GG ++     +R S  V++AFG++ +A+R++CSLQ+D+++ A 
Sbjct: 1   MAASLQAAATLMQPTKVGGVSARNNLQLRSSQSVSKAFGLEPSASRLSCSLQTDLKDFAQ 60

Query: 211 KCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 390
           KC DAAK+AGFALATSAL+VSGA+AEG PKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG
Sbjct: 61  KCTDAAKIAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 120

Query: 391 VDSFPFKAGKYEMKKFCL 444
           VDSF FK GKY  KKFCL
Sbjct: 121 VDSFAFKPGKYNAKKFCL 138

to top

>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  186 bits (473), Expect = 2e-47
 Identities = 95/134 (70%), Positives = 112/134 (83%), Gaps = 2/134 (1%)
 Frame = +1

Query: 49  MAASLQAAATLM-PAKIGGRASSVRPSSHVARAFGVDA-AARITCSLQSDIREVASKCAD 222
           MAASLQAAATLM P K+      ++ +  V++AFG++   A++TCSLQSD +E+A KC +
Sbjct: 1   MAASLQAAATLMQPTKLRSNTLQLKSNQSVSKAFGLEHYGAKVTCSLQSDFKELAHKCVE 60

Query: 223 AAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSF 402
           A+K+AGFALATSAL+VSGASAEGAPKRLTFDEIQSKTY+EVKGTGTANQCPTIDGGVDSF
Sbjct: 61  ASKIAGFALATSALVVSGASAEGAPKRLTFDEIQSKTYLEVKGTGTANQCPTIDGGVDSF 120

Query: 403 PFKAGKYEMKKFCL 444
            FK GKY  KK CL
Sbjct: 121 SFKPGKYNAKKLCL 134

to top

>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  186 bits (472), Expect = 2e-47
 Identities = 97/135 (71%), Positives = 115/135 (85%), Gaps = 3/135 (2%)
 Frame = +1

Query: 49  MAASLQAAATLM-PAKIGGRAS-SVRPSSHVARAFGVD-AAARITCSLQSDIREVASKCA 219
           MAASLQAAATLM P K+G R +  +R +  V++AFGV+  + R+TCSLQ++I+E+A KC 
Sbjct: 1   MAASLQAAATLMQPTKVGVRNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCT 60

Query: 220 DAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDS 399
           DAAK+AGFALATSAL+VSGA+AEG PKRLT+DEIQSKTYMEVKGTGTANQCPTI+GGV S
Sbjct: 61  DAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIEGGVGS 120

Query: 400 FPFKAGKYEMKKFCL 444
           F FK GKY  KKFCL
Sbjct: 121 FAFKPGKYTAKKFCL 135

to top

>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  184 bits (466), Expect = 1e-46
 Identities = 98/138 (71%), Positives = 115/138 (83%), Gaps = 6/138 (4%)
 Frame = +1

Query: 49  MAASLQAAATLM-PAKIGGRAS----SVRPSSHVARAFGVD-AAARITCSLQSDIREVAS 210
           MAASLQAAATLM P K+G   +     +R +  V++AFGV+ AAAR+TCSLQ++++++A 
Sbjct: 1   MAASLQAAATLMQPTKVGVAPARNNLQLRSAQSVSKAFGVEPAAARLTCSLQTELKDLAQ 60

Query: 211 KCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 390
           K  DAAK+AGFALATSAL+VSGA+AEG PKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG
Sbjct: 61  KFTDAAKVAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 120

Query: 391 VDSFPFKAGKYEMKKFCL 444
           V SF FK GKY  KKFCL
Sbjct: 121 VASFAFKPGKYNAKKFCL 138

to top

>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 331

 Score =  180 bits (457), Expect = 1e-45
 Identities = 95/136 (69%), Positives = 112/136 (82%), Gaps = 5/136 (3%)
 Frame = +1

Query: 49  MAASLQAAAT-LMPAKIGGRASS---VRPSSHVARAFGVDAA-ARITCSLQSDIREVASK 213
           MA SLQAAAT L PAKI    S    +R +  V ++FG+D++ AR+TCSL SD+++ A K
Sbjct: 1   MATSLQAAATFLQPAKIAASPSRNVHLRSNQTVGKSFGLDSSQARLTCSLHSDLKDFAGK 60

Query: 214 CADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGV 393
           C+DAAK+AGFALATSAL+VSGA AEGAPKRLT+DEIQSKTYMEVKGTGTANQCPTIDGG 
Sbjct: 61  CSDAAKIAGFALATSALVVSGAGAEGAPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGS 120

Query: 394 DSFPFKAGKYEMKKFC 441
           ++F FKAGKY  KKFC
Sbjct: 121 ETFSFKAGKYTGKKFC 136

to top

>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 332

 Score =  171 bits (432), Expect = 1e-42
 Identities = 92/137 (67%), Positives = 110/137 (80%), Gaps = 6/137 (4%)
 Frame = +1

Query: 49  MAASLQAAAT-LMPAKIG---GRASS-VRPSSHVARAFGVD-AAARITCSLQSDIREVAS 210
           MAASLQ+ AT L  AKI     R SS +R +  V ++FG++ ++AR+TCS QSD ++   
Sbjct: 1   MAASLQSTATFLQSAKIATAPSRGSSHLRSTQAVGKSFGLETSSARLTCSFQSDFKDFTG 60

Query: 211 KCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 390
           KC+DA K+AGFALATSAL+VSGASAEGAPKRLT+DEIQSKTYMEVKGTGTANQCPTIDGG
Sbjct: 61  KCSDAVKIAGFALATSALVVSGASAEGAPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGG 120

Query: 391 VDSFPFKAGKYEMKKFC 441
            ++F FK GKY  KKFC
Sbjct: 121 SETFSFKPGKYAGKKFC 137

to top

>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  168 bits (425), Expect = 6e-42
 Identities = 88/137 (64%), Positives = 111/137 (81%), Gaps = 5/137 (3%)
 Frame = +1

Query: 49  MAASLQAAAT-LMPAKIGGRAS-SVRPSSHVARAFGVDAAA---RITCSLQSDIREVASK 213
           MAASLQA+ T L P K+  R +  +R + +V +AFGV++A+   R++ SLQSD++E+A+K
Sbjct: 1   MAASLQASTTFLQPTKVASRNTLQLRSTQNVCKAFGVESASSGGRLSLSLQSDLKELANK 60

Query: 214 CADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGV 393
           C DA K+AG ALATSAL+ SGA+AEG  KRLT+DEIQSKTY+EVKGTGTANQCPT++GGV
Sbjct: 61  CVDATKLAGLALATSALIASGANAEGG-KRLTYDEIQSKTYLEVKGTGTANQCPTVEGGV 119

Query: 394 DSFPFKAGKYEMKKFCL 444
           DSF FK GKY  KKFCL
Sbjct: 120 DSFAFKPGKYTAKKFCL 136

to top

>PSBO_BRARA (P83504) Oxygen-evolving enhancer protein 1, chloroplast (OEE1)|
           (Fragment)
          Length = 31

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +1

Query: 286 EGAPKRLTFDEIQSKTYMEVKGTGTANQCPT 378
           EGAPKRLT+DEIQSKTYMEVKGTGTANQCPT
Sbjct: 1   EGAPKRLTYDEIQSKTYMEVKGTGTANQCPT 31

to top

>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 293

 Score = 65.9 bits (159), Expect = 4e-11
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
 Frame = +1

Query: 124 SSHVARAFGVDAAARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAEGAPKR 303
           ++   +A GV  AAR           V +     A+   F  A +A++ + A   G+   
Sbjct: 3   AAQTVKAAGVSRAAR----------PVRANVVCKAQKVEFGQAAAAVVAASALVAGSANA 52

Query: 304 LTFDEIQSKTYMEVKGTGTANQCPTID-GGVDSFPFKAGKYEMKKFCL 444
           LT+DE+Q  TY++VKGTG AN CP ++ G  D     AG Y+++ FC+
Sbjct: 53  LTYDELQGLTYLQVKGTGIANTCPVLEKGSTDLSELSAGTYKLENFCI 100

to top

>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 291

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
 Frame = +1

Query: 160 AARITCSLQSDIREVASKCADA----AKMAGFALATSALLVSGASAEGAPKRLTFDEIQS 327
           A R   S ++ +R      A A    A+  G A A +AL    A   G+   LTFDEIQ 
Sbjct: 2   ALRAAQSAKAGVRAARPNRATAVVCKAQKVGQAAAAAALAT--AMVAGSANALTFDEIQG 59

Query: 328 KTYMEVKGTGTANQCPTIDGGVDSF-PFKAGKYEMKKFCL 444
            TY++VKG+G AN CP ++ G  +    KAG Y+++ FC+
Sbjct: 60  LTYLQVKGSGIANTCPVLESGTTNLKELKAGSYKLENFCI 99

to top

>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 338

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
 Frame = +1

Query: 226 AKMAGFALATSALLVSGASAEGA-PKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDS- 399
           A +AG   A  A L+  A A  A    LT+DE+QS +Y+EVK +G A  CP +  GV S 
Sbjct: 69  AVLAGAGRAMGAALIGAAVAGSANAASLTYDELQSLSYLEVKSSGIAGTCPVLADGVSSK 128

Query: 400 FPFKAGKYEMKKFCL 444
              KAGKYE+  +CL
Sbjct: 129 LSLKAGKYEINNWCL 143

to top

>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +1

Query: 247 LATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGV-DSFPFKAGK- 420
           +AT   +  G  +  AP    F   Q+ TY ++ GTG AN+CPT+D     ++P  + + 
Sbjct: 7   MATLLAVCLGIFSLSAP---AFAAKQTLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQT 63

Query: 421 YEMKKFCL 444
           Y + + CL
Sbjct: 64  YRIARLCL 71

to top

>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +1

Query: 247 LATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGV-DSFPFKAGK- 420
           +AT   +  G  +  AP    F   Q+ TY ++ GTG AN+CPT+D     ++P  + + 
Sbjct: 7   MATLLAVCLGIFSLSAP---AFAAKQTLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQT 63

Query: 421 YEMKKFCL 444
           Y + + CL
Sbjct: 64  YRIARLCL 71

to top

>LRFN4_HUMAN (Q6PJG9) Leucine-rich repeat and fibronectin type-III|
           domain-containing protein 4 precursor
          Length = 635

 Score = 35.4 bits (80), Expect = 0.065
 Identities = 31/91 (34%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
 Frame = -3

Query: 369 LVRGAGTLHLHVGLALDFVEGQPLG----------------RPLRTCARDEEGRGCEGEA 238
           LVRG G  +  + L L  V+ Q  G                RP R+C+ D    GC G A
Sbjct: 538 LVRGRGAGNGRLPLKLSHVQSQTNGGPSPTPKAHPPRSPPPRPQRSCSLDLGDAGCYGYA 597

Query: 237 GHLGGVGALACDLPDVGLQGA--RDPGGSVD 151
             LGG  A        GL GA  R  GGS +
Sbjct: 598 RRLGGAWARRSHSVHGGLLGAGCRGVGGSAE 628

to top

>5E5_RAT (Q63003) 5E5 antigen|
          Length = 825

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 35/102 (34%), Positives = 38/102 (37%), Gaps = 4/102 (3%)
 Frame = -3

Query: 360 GAGTLHLHVGLALDFVEGQPLGRPLRTCARD-EEGRGCEGEAGHLGGVGALACDLPDVGL 184
           GA T H H             GR  R   R    G G     G  GG G         GL
Sbjct: 543 GAPTAHAHAVPGPGPAAATLGGRGRRGSWRGGRRGGGAGASGGGRGGRGRGRGGRRGSGL 602

Query: 183 QGARDPGGSVDAERPGDVRRRPHG---GGPAADLGRHQRGRG 67
            G R+  GS  A R G+ RRR HG    G A    R +R RG
Sbjct: 603 SGTREDAGSPSARR-GEQRRRGHGPPAAGAAQVSTRGRRARG 643

to top

>CHS4_NEUCR (Q01285) Chitin synthase 4 (EC 2.4.1.16) (Chitin-UDP|
           acetyl-glucosaminyl transferase 4) (Class-IV chitin
           synthase 4)
          Length = 1195

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 36/136 (26%), Positives = 50/136 (36%), Gaps = 13/136 (9%)
 Frame = +1

Query: 13  DRSSRVPSPPTNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSD 192
           +R +R P  PT MA+   A   L P  I G+ +  R S   + A+G  ++          
Sbjct: 567 ERGNRKPGLPTTMASQNAAGQLLHPGTIYGQGNESRSSFLKSDAYGSSSSPADGPGPAGF 626

Query: 193 IREVASKCADAAKMA-GFALATSALLVSGASAEGAPKRLTFDEIQSKTYME--------- 342
           I E       +  M  GF LA +  LV+  S      R T D I    Y           
Sbjct: 627 IHEAVVPQPPSDWMPFGFPLAHTICLVTAYSEGEMGVRTTLDSIAMTDYPNSHKVILVIC 686

Query: 343 ---VKGTGTANQCPTI 381
              +KG G  +  P I
Sbjct: 687 DGIIKGHGEEHSTPDI 702

to top

>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 273

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +1

Query: 331 TYMEVKGTGTANQCPTI-DGGVDSFPFKAGK-YEMKKFCL 444
           TY +++GTG AN+CP + +    S P  + K Y +K+ CL
Sbjct: 34  TYEQIRGTGLANKCPQLTETSRGSIPLDSSKSYVLKELCL 73

to top

>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor|
          Length = 1022

 Score = 32.7 bits (73), Expect = 0.42
 Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
 Frame = -3

Query: 312 EGQPLGRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGD 133
           +G P  +  R     E  RG  GE G+ G  G       D GL G R P G+V    PG+
Sbjct: 435 KGGPGAKGERGDPGPEGPRGLPGEVGNKGARG-------DQGLPGPRGPTGAVG--EPGN 485

Query: 132 VRRRPHGG--GPAADLG----RHQRGR 70
           +  R   G  GP  D G    +  RGR
Sbjct: 486 IGSRGDPGDLGPRGDAGPPGPKGDRGR 512

to top

>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor|
          Length = 684

 Score = 32.3 bits (72), Expect = 0.55
 Identities = 34/93 (36%), Positives = 36/93 (38%), Gaps = 11/93 (11%)
 Frame = -3

Query: 333 GLALDFVEGQPLGRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPD-----VGLQGAR- 172
           G A +  E  P G P      D    G  GEAGH G  GAL    P       G QG + 
Sbjct: 352 GRAGELGEAGPSGEP--GVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKG 409

Query: 171 ---DPGGSVDAERPGDVRRRPHGG--GPAADLG 88
              DPG        GDV  R  GG  GP  D G
Sbjct: 410 SMGDPGLPGPQGLRGDVGDRGPGGAAGPKGDQG 442

to top

>LRFN4_MOUSE (Q80XU8) Leucine-rich repeat and fibronectin type-III|
           domain-containing protein 4 precursor
          Length = 636

 Score = 32.0 bits (71), Expect = 0.71
 Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 19/92 (20%)
 Frame = -3

Query: 369 LVRGAGTLHLHVGLALDFVEGQPLG----------------RPLRTCARD-EEGRGCEGE 241
           LVRG G  +  + L L  V+ Q  G                RP R+C+ D  +  GC G 
Sbjct: 538 LVRGRGAGNGRLPLKLSHVQSQTNGGTSPMPKSHPPRSPPPRPQRSCSLDLGDTGGCYGY 597

Query: 240 AGHLGGVGALACDLPDVGLQGA--RDPGGSVD 151
           A  LGG  A        GL GA  R  GGS +
Sbjct: 598 ARRLGGAWARRSHSVHGGLLGAGCRGVGGSAE 629

to top

>ZDH18_HUMAN (Q9NUE0) Palmitoyltransferase ZDHHC18 (EC 2.3.1.-) (Zinc finger|
           DHHC domain-containing protein 18) (DHHC-18)
          Length = 388

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = +2

Query: 134 SPGRSASTLPPGSRAP---CNPTSGRSQA--SAPTPPRW 235
           SPG +     PG+R P    +PT G   A  +AP PPRW
Sbjct: 10  SPGAAPLPASPGARRPGPAASPTPGPGPAPPAAPAPPRW 48

to top

>CTAG2_HUMAN (O75638) Cancer/testis antigen 2 (L antigen family member 1)|
           (LAGE-1 protein) (ESO-2 protein)
          Length = 210

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 26/74 (35%), Positives = 29/74 (39%), Gaps = 14/74 (18%)
 Frame = -3

Query: 264 EGRGCEGEAGHLGGVGALACDLPD-----------VGLQGARDP--GGSVDAERP-GDVR 127
           EGRG  G  G   G G     +PD            G  G R P   G+  A  P G   
Sbjct: 4   EGRGTGGSTGDADGPGGPG--IPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPRGGAP 61

Query: 126 RRPHGGGPAADLGR 85
           R PHGG  +A  GR
Sbjct: 62  RGPHGGAASAQDGR 75

to top

>PG34_MYCTU (Q50594) Hypothetical PE-PGRS family protein PE_PGRS34|
          Length = 515

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 26/82 (31%), Positives = 30/82 (36%)
 Frame = -3

Query: 261 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGRH 82
           G G  G AG  GG G     L   G  G   P G+ D    GD R   + GG    +G  
Sbjct: 228 GLGKAGFAGGAGGTGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGN-GGDGGSVGAA 286

Query: 81  QRGRGLERRCHVGRWAWYAGRS 16
             G G       G W +  G S
Sbjct: 287 PTGIGNGGNGGNGGWLYGDGGS 308

to top

>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 54/183 (29%), Positives = 63/183 (34%), Gaps = 43/183 (23%)
 Frame = -3

Query: 441  AELLHLVLAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRPLRTCARDEE 262
            AEL+  ++ GL    +     G  L  G      H GL L          P     RDE+
Sbjct: 1259 AELVEALVGGLHPRVLQP---GHGLAGGPAVDEAHEGLVL---------LPRVPHLRDED 1306

Query: 261  G----RGCEGEAG---------HLGGV-GALACD------------LPDVGLQ---GARD 169
            G    RG     G          L GV GA   D            LP+ G Q   G R 
Sbjct: 1307 GHGPGRGAVAGRGLADVVLVPEPLAGVPGAAVADAAVGRRVGAGPGLPERGEQRPVGRRG 1366

Query: 168  P----------GGSVDAERPGDVRRRPHGG--GPAADLGRHQRGRG--LERRCHVGRWAW 31
            P          G ++ A  PG +R R  GG  G     GR  RGRG    RR   G   W
Sbjct: 1367 PVGHEREVVVGGAALPARGPGGLRGRGRGGRGGGGGGGGRGPRGRGGRRRRRWRPGAGEW 1426

Query: 30   YAG 22
             AG
Sbjct: 1427 GAG 1429

to top

>CRUM2_HUMAN (Q5IJ48) Crumbs homolog 2 precursor (Crumbs-like protein 2)|
          Length = 1285

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 345 HLHVGLALDFVEGQPLGRPLRTCARDEEGRGC 250
           H+HVG  L   + QP G P R C +D    GC
Sbjct: 744 HVHVGGRLLAADSQPWGGPFRGCLQDLRLDGC 775

to top

>FA21C_PONPY (Q5RDC1) Protein FAM21C|
          Length = 1340

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
 Frame = +1

Query: 43  TNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCAD 222
           ++ +AS    A L+P K+    S           FG  AA R T SLQ+   E A     
Sbjct: 548 SSQSASKLKGAPLLPGKLPTSVSLFEDEDEEDNLFGGTAAKRQTLSLQAQGEEKAKASEL 607

Query: 223 AAKMAGFALATSALLVSGASAE--GAPKRLTFDEIQSKTYMEVKGTGT 360
           + K A      SALL S    +    P   T     S++  E + +GT
Sbjct: 608 SKKKA------SALLFSSDEEDQWNIPASQTHSASDSRSKGESRDSGT 649

to top

>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
 Frame = -3

Query: 255  GCEGEAGHLGGVGAL-----ACDLPDVGLQGAR-DPGGSVDAERPGDVRRRPHGGGP--A 100
            G +GE GH+G +G +     A +  D GL G +  PG   D   PG +    H G P  A
Sbjct: 1397 GPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGDPGPPGPIGSLGHPGPPGVA 1456

Query: 99   ADLGR 85
              LG+
Sbjct: 1457 GPLGQ 1461

to top

>LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
 Frame = +1

Query: 163  ARITCSLQSDIREVASK--CADAAKMAGFALATSALLVSGASAEGA-----------PKR 303
            AR+  SL++ I     K  C  A  + G    T    ++ A+ +G+           P  
Sbjct: 1678 ARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTDGNTINMANMDGSNSKILFQNQKEPVG 1737

Query: 304  LTFDEIQSKTYMEVKGTGTANQCPTIDGG 390
            L+ D +++K Y    G GT N+C  +DGG
Sbjct: 1738 LSIDYVENKLYWISSGNGTINRC-NLDGG 1765

to top

>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
 Frame = +1

Query: 163  ARITCSLQSDIREVASK--CADAAKMAGFALATSALLVSGASAEGA-----------PKR 303
            AR+  SL++ I     K  C  A  + G    T    ++ A+ +G+           P  
Sbjct: 1678 ARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTDGNTINMANMDGSNSKILFQNQKEPVG 1737

Query: 304  LTFDEIQSKTYMEVKGTGTANQCPTIDGG 390
            L+ D +++K Y    G GT N+C  +DGG
Sbjct: 1738 LSIDYVENKLYWISSGNGTINRC-NLDGG 1765

to top

>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 468

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
 Frame = +1

Query: 1   NHE*DRSSRVPSPPTNMAASLQAAATLMPAKIGGRASSVR------PSSHVARAFG 150
           +H     + VP PP +      +  +LMP + GG +SS+R      P S++  A+G
Sbjct: 160 HHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSYMQGAYG 215

to top

>GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding factor 6)|
          Length = 449

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
 Frame = -3

Query: 405 GEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRPLRTCARDEEGRGCEGEAGHLG 226
           G G  AA  G A   GAG+   HV     +    P+       AR+  G    G     G
Sbjct: 90  GSGGGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMA---NGAAREPGGYAAAGS----G 142

Query: 225 GVGALACDLPDVGLQGARDPG-GSVDAERP 139
           G G ++     +   G R+P   S+ A RP
Sbjct: 143 GAGGVSGGGSSLAAMGGREPQYSSLSAARP 172

to top

>CAF1_EPHMU (P18856) Collagen EMF1-alpha precursor (Fibrillar collagen)|
           (Fragment)
          Length = 547

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 21/58 (36%), Positives = 29/58 (50%)
 Frame = -3

Query: 258 RGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGR 85
           +G +GE G L G+   +      G  G   P G+  A +PG +R +P   GP  DLGR
Sbjct: 27  QGPDGEPG-LPGLPGQSGKSGASGQPGVPGPVGA--AGKPGSIRGQPGPPGPPGDLGR 81

to top

>FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related protein FKHL7)|
           (Forkhead-related transcription factor 3) (FREAC-3)
          Length = 553

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 19/56 (33%), Positives = 23/56 (41%)
 Frame = -3

Query: 261 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAAD 94
           G G  G AG  GG G   C+L  + L  A + GG +     G        GG A D
Sbjct: 377 GGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGG-------AGGSAVD 425

to top

>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor|
          Length = 675

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = -3

Query: 255 GCEGEAGHLGGVGALACDLPDVGLQGARDPGG---SVDAERPGDVRRRPHGGGPAADLG 88
           G +G  GH GG G +  +  + G  G   P G   SV  + P  +R  P   GPA D G
Sbjct: 186 GFKGHTGHKGGPGEIGKE-GEKGSPGPPGPPGIPGSVGLQGPRGLRGLPGPMGPAGDRG 243

to top

>IGSF8_MOUSE (Q8R366) Immunoglobulin superfamily member 8 precursor (CD81|
           partner 3) (Glu-Trp-Ile EWI motif containing protein 2)
           (EWI-2) (Keratinocytes-associated transmembrane protein
           4) (KCT-4) (Prostaglandin regulatory-like protein)
           (CD316 antigen)
          Length = 611

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 29/76 (38%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
 Frame = -3

Query: 315 VEGQPLGRPLRTC---ARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAE 145
           V G P G  L       R EEG    G A  +GGVG        V   G R  GG V  E
Sbjct: 464 VRGGPPGLRLAASWWVERPEEGELSSGPAQLVGGVGQ-----DGVAELGVRPGGGPVSVE 518

Query: 144 --RPGDVRRRPHGGGP 103
              P   R R HG GP
Sbjct: 519 LVGPRSHRLRLHGLGP 534

to top

>TRPE2_HALSA (Q9HS66) Anthranilate synthase component 1 2 (EC 4.1.3.27)|
           (Anthranilate synthase component I 2)
          Length = 488

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 24/78 (30%), Positives = 33/78 (42%)
 Frame = -3

Query: 426 LVLAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRPLRTCARDEEGRGCE 247
           L   G +G+    ++  R LVR A T HL VG  +   +  P      T A+    R   
Sbjct: 414 LAAIGFDGDAT-LSITIRTLVRRAATYHLRVGAGI-VHDSTPAAEYDETLAK---ARALV 468

Query: 246 GEAGHLGGVGALACDLPD 193
              G  GG+G +A   PD
Sbjct: 469 TALGDAGGIGRVADTTPD 486

to top

>CRP_MOUSE (P14847) C-reactive protein precursor|
          Length = 225

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 22  SRVPSPPTNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAA 162
           S +P  PT++ AS ++A  ++   I G+A  VR S H     G DA+
Sbjct: 106 SEIPEAPTHICASWESATGIVEFWIDGKA-KVRKSLHKGYTVGPDAS 151

to top

>AVEN_HUMAN (Q9NQS1) Cell death regulator Aven|
          Length = 362

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = -3

Query: 180 GARDPGGSVDAERPG---DVRRRPHGGGPAADLGRHQRGRG 67
           G   PGG   +ERPG    V R   GGG     GR  RGRG
Sbjct: 16  GRGRPGGDRHSERPGAAAAVARGGGGGGGGDGGGRRGRGRG 56

to top

>XYNA_ASPKA (P33559) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase|
           A) (1,4-beta-D-xylan xylanohydrolase A)
          Length = 327

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -1

Query: 164 AAASTPNARATCDDGRTEEARPPILAG-ISVAAAWRDAAMLVGGLGTR 24
           A A+ PNA+   +D   + A  P LAG +S    W +A + + G+G++
Sbjct: 186 ARAADPNAKLYINDYNLDSASYPKLAGMVSHVKKWIEAGIPIDGIGSQ 233

to top

>SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)|
          Length = 747

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = -3

Query: 261 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGRH 82
           G   +G  G LGG GA       +G QGA    G+  A   G   +  +GG  +   GR 
Sbjct: 11  GGAGQGGYGGLGGQGAGQGGYGGLGGQGAGQGAGAAAAAAAGGAGQGGYGGLGSQGAGRG 70

Query: 81  QRGRG 67
            +G G
Sbjct: 71  GQGAG 75

to top

>FA21C_HUMAN (Q9Y4E1) Protein FAM21C|
          Length = 1320

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 22/73 (30%), Positives = 35/73 (47%)
 Frame = +1

Query: 43  TNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCAD 222
           ++ +AS    A+L+P K+    S           FG  AA + T SLQ+  RE  +K ++
Sbjct: 549 SSQSASNLKGASLLPGKLPTSVSLFDDEDEEDNLFGGTAAKKQTLSLQAQ-REEKAKASE 607

Query: 223 AAKMAGFALATSA 261
            +K    AL  S+
Sbjct: 608 LSKKKASALLFSS 620

to top

>KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C member 3|
           (Voltage-gated potassium channel subunit Kv3.3)
           (KSHIIID)
          Length = 757

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = -3

Query: 177 ARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGRG 67
           A  P G      PG  R  P  G PAA +GRH  G G
Sbjct: 49  AASPAGPPAPRGPGGRRAEPCPGLPAAAMGRHGGGGG 85

to top

>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 26.6 bits (57), Expect(2) = 3.8
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
 Frame = +1

Query: 31  PSPPTNMAASLQAAATLMPA--KIGGRA--SSVRPSSHVAR 141
           P PP + A+S QAAA   P+  ++  R   S+ RPSS  AR
Sbjct: 235 PRPPASSASSPQAAAPAAPSATRLPRRTTPSAPRPSSRPAR 275



 Score = 21.6 bits (44), Expect(2) = 3.8
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
 Frame = +2

Query: 143 RSASTLPPGSRAPCNPTSGRSQAS---APTPP 229
           R+ +   P  R P  PT  R +A+   +P PP
Sbjct: 300 RAPAGCSPARRTPSAPTDRRCRAARRGSPRPP 331

to top

>SMC1A_XENLA (O93308) Structural maintenance of chromosome 1 protein (xSMC1)|
          Length = 1232

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 420 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 289
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

to top

>SMC1A_RAT (Q9Z1M9) Structural maintenance of chromosome 1-like 1 protein|
           (SMC-protein)
          Length = 1233

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 420 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 289
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

to top

>SMC1A_MOUSE (Q9CU62) Structural maintenance of chromosome 1-like 1 protein|
           (SMC1alpha protein) (Chromosome segregation protein
           SmcB) (Sb1.8)
          Length = 1233

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 420 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 289
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

to top

>SMC1A_HUMAN (Q14683) Structural maintenance of chromosome 1-like 1 protein|
           (SMC1alpha protein) (DXS423E protein) (Sb1.8)
          Length = 1233

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 420 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 289
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

to top

>SMC1A_BOVIN (O97593) Structural maintenance of chromosome 1-like 1 protein|
           (SMC-protein)
          Length = 1233

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 420 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 289
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

to top

>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 22/64 (34%), Positives = 23/64 (35%)
 Frame = -3

Query: 297 GRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRP 118
           GRP R       GR   G  G+ GG GA               PG    A   G  R RP
Sbjct: 272 GRPGRPGGAPGAGRPGGGGGGYRGGGGA---------------PGAGAGAPAGGGFRGRP 316

Query: 117 HGGG 106
            GGG
Sbjct: 317 GGGG 320

to top

>RP1L1_MOUSE (Q8CGM2) Retinitis pigmentosa 1-like 1 protein (Retinitis pigmentosa|
            1-like protein 1)
          Length = 1859

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +1

Query: 40   PTNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITC 177
            PT +AAS Q    L+ +K G  +S    SS VA+     A A I C
Sbjct: 1044 PTKVAASTQIMKALLGSKPGRPSSLPEVSSTVAQRLSSSAGAFIAC 1089

to top

>ADRB1_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1|
           adrenoreceptor)
          Length = 480

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = +1

Query: 22  SRVPSPPTNMAASLQAAATLMPAKIGGRASSVRPSSHVA 138
           S VP+PP        AAAT  P  + GRA   RPS  VA
Sbjct: 282 SPVPAPPPGPPRPAAAAATTAPL-VNGRAGKRRPSRLVA 319

to top

>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase|
           (EC 2.7.11.1) (Aortic preferentially expressed protein
           1) (APEG-1)
          Length = 3223

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -3

Query: 177 ARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGRG 67
           A  P     AE+PGD   RP   GPA   GR + G G
Sbjct: 552 AAQPPSPSSAEKPGDEPGRPRSRGPA---GRTEPGEG 585

to top

>VGLD_BHV1P (P24906) Glycoprotein D precursor (Glycoprotein IV)|
          Length = 417

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
 Frame = -3

Query: 276 ARDEEGR------GCEGEAGHLGGVGALACDLPDV--GLQGARDPGGSVDAERP 139
           AR++EG       G EG  G  G  G      P+   G +G   PG S DA+RP
Sbjct: 283 AREDEGETEDGAAGREGNGGPPGPEGDGESQTPEANGGAEGEPKPGPSPDADRP 336

to top

>RBL_XANFL (P23011) Ribulose bisphosphate carboxylase large chain (EC|
           4.1.1.39) (RuBisCO large subunit)
          Length = 488

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
 Frame = -3

Query: 435 LLHLVLAG------LEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPL 298
           LLH+  AG       +G G+   V  + L R AG  HLH G A+  +EG P+
Sbjct: 294 LLHMHRAGHGTYTRQKGHGISFRVIAKWL-RLAGVDHLHTGTAVGKLEGDPM 344

to top

>THIC_RHOPA (P61427) Thiamine biosynthesis protein thiC|
          Length = 666

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +1

Query: 175 CSLQ--SDIREVASKCADAAKMAGFALATSALLVSGASAEG-APKRLTFDEIQSKTYMEV 345
           CS++   D+R+ A+   D  K A + +  + + +SG   +G A     F E+ S  Y++ 
Sbjct: 596 CSMKITQDVRDYAAGLGDNEKAALYPVGHAGMTISGTIEDGMAQMSAKFKEMGSSVYLDA 655

Query: 346 KGTGTANQ 369
           +    +N+
Sbjct: 656 EKVKESNK 663

to top

>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 1008

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +2

Query: 134 SPGRSASTLPPGSRAPCNPTSGRS-QASAPTPPR 232
           SP   A+  PPG R   N T   S +ASAP PPR
Sbjct: 776 SPCPEAAAPPPGPRTRDNFTKAPSWEASAPPPPR 809

to top

>RPOB_DECAR (Q47JB0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1427

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = +1

Query: 52   AASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCADAAK 231
            A+ ++  +  +P+ I G    V+    V    G++   R    +   +R      AD  +
Sbjct: 985  ASDVKDTSLRVPSGIAGTVIDVQ----VFTREGIERDKRAQAIIDEHLRHYKLDLADQMR 1040

Query: 232  MAGF-ALATSALLVSGASAEGAPKRLTFDEIQSKTYME 342
            +    A A    L++G  A G PK+L    +  K Y++
Sbjct: 1041 IVERDAFARVERLITGKKANGGPKKLAKGTVIDKVYLD 1078

to top

>OCD1_RHIME (P58338) Ornithine cyclodeaminase 1 (EC 4.3.1.12) (OCD 1)|
          Length = 329

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
 Frame = +1

Query: 118 RPSSHVARAFGVDAAARI---TCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAE 288
           R  S VA  FG    AR+     +L   IRE      DAAK    A+A    L     AE
Sbjct: 129 REDSSVAAVFGAGMQARLQLEALALVRPIREARIWARDAAKAEAAAIALGGKLGFAVKAE 188

Query: 289 GAPK 300
             P+
Sbjct: 189 TDPR 192

to top

>HIS4_CORDI (P60580) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 242

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 426 LVLAGLEGEGVDAAVDGRALVRGAGTL 346
           L LA  E EG+D+A+ G+AL  G  TL
Sbjct: 209 LELARYEDEGIDSAIIGKALYEGRFTL 235

to top

>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)|
          Length = 637

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
 Frame = -3

Query: 273 RDEEGRGCEGEAGHLGGVGALACDLP--DVGLQGARDPGGSVDAERPGDVRRRPHGGG 106
           R E  R  EG+A      GA    +P   V  +G+ D GGSVDA    D       GG
Sbjct: 129 RGEAAREAEGQAAAPAAPGAQEEAVPGDSVDAEGSIDAGGSVDAAGSVDAGGSIDAGG 186

to top

>VGLD_BHV1S (Q08100) Glycoprotein D precursor (Glycoprotein IV)|
          Length = 417

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
 Frame = -3

Query: 276 ARDEEGRGCEGEAGHLG--------GVGALACDLPDVGLQGARDPGGSVDAERP 139
           AR++EG   +G AG  G        G G       + G +G   PG S DA+RP
Sbjct: 283 AREDEGETEDGAAGREGNGGPPGPEGDGESPTPEANGGAEGEPKPGPSPDADRP 336

to top

>NH103_CAEEL (O16359) Nuclear hormone receptor family member nhr-103|
          Length = 394

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -2

Query: 337 CRSCSGFRRRSASWA 293
           CRSC+ F RRSA+W+
Sbjct: 28  CRSCAAFFRRSATWS 42

to top

>ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC 2.3.1.94) (ORF|
            2) (6-deoxyerythronolide B synthase II) (DEBS 2)
          Length = 3566

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 55   ASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREV 204
            A L  A  + PA + G +     ++HVA A  ++AAA++       +RE+
Sbjct: 2087 AELWRAHGVTPAAVVGHSQGEIAAAHVAGALSLEAAAKVVALRSQVLREL 2136

to top

>34KD_MYCTU (P65637) 34 kDa antigenic protein homolog|
          Length = 303

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 21 FPRTKPTDQHGSVSPSRGHADAG 89
          +P+ +P   +G V+PS  HAD G
Sbjct: 10 YPQAQPAGSYGGVTPSFAHADEG 32

to top

>34KD_MYCBO (P65638) 34 kDa antigenic protein homolog|
          Length = 303

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 21 FPRTKPTDQHGSVSPSRGHADAG 89
          +P+ +P   +G V+PS  HAD G
Sbjct: 10 YPQAQPAGSYGGVTPSFAHADEG 32

to top

>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC|
           5.4.99.-) (rRNA-uridine isomerase B) (rRNA
           pseudouridylate synthase B)
          Length = 550

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
 Frame = -3

Query: 261 GRGCEGEAGHLGGVGALACDLPDVGLQG-ARDPGGSVDAER------PGDVRRRPHGGG 106
           GR   G  G  G  G  + +    G  G AR PGG   A R      PG   RRP GGG
Sbjct: 488 GRPSGGRPGPGGNRGPASANRGPGGPGGGARGPGGPGGAPRGPGGRPPGGGNRRPPGGG 546


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,910,301
Number of Sequences: 219361
Number of extensions: 1227586
Number of successful extensions: 6020
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 5338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5983
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result