ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet16b08 |
|---|---|
| Clone Library Name | barley_pub |
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 192 bits (487), Expect = 4e-49 Identities = 98/150 (65%), Positives = 110/150 (73%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQTLNQLLTEMDGFEGNTG+IV+AATNRADILDSALLR Sbjct: 271 IDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLR 330 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQVSVDVPD RGR IL+VH NKK ++ VSLE IA RTPGFSG Sbjct: 331 PGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAA 390 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGMEGT 452 RR ++ ++ EID SIDR+VAG+EGT Sbjct: 391 ILTARRRKSAMTMSEIDTSIDRVVAGLEGT 420
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 189 bits (479), Expect = 4e-48 Identities = 95/149 (63%), Positives = 108/149 (72%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQTLNQLLTEMDGFEGNTGII++AATNR D+LD+ALLR Sbjct: 271 IDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLR 330 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV+VDVPDV+GR EIL VH NKK D +SLE+IA RTPGFSG Sbjct: 331 PGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAA 390 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGMEG 449 RR + I+ EID SIDR++AGMEG Sbjct: 391 ILTARRRKKQITISEIDASIDRVIAGMEG 419
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 183 bits (465), Expect = 2e-46 Identities = 92/150 (61%), Positives = 107/150 (71%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQTLNQLLTEMDGFEGNTGII++AATNR D+LDSAL+R Sbjct: 270 IDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMR 329 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV VD PD GR EIL+VH NKK +VS++ IA RTPGFSG Sbjct: 330 PGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAA 389 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGMEGT 452 RR ++ I+ EIDD++DR+VAGMEGT Sbjct: 390 ILTARRRKSAITLLEIDDAVDRVVAGMEGT 419
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 179 bits (454), Expect = 3e-45 Identities = 91/150 (60%), Positives = 106/150 (70%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQTLNQLLTEMDGF G+TG+IVVAATNR D+LDSALLR Sbjct: 269 IDEIDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLR 328 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQ+ V +P++ GR ILKVH KK DV LEVIA RTPGFSG Sbjct: 329 PGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAA 388 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGMEGT 452 RRG+ I+ KEI+DSID+I+AG+EG+ Sbjct: 389 ILTVRRGKVEITMKEIEDSIDKIIAGLEGS 418
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 178 bits (452), Expect = 5e-45 Identities = 90/150 (60%), Positives = 105/150 (70%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQTLNQLLTEMDGFEGNTG+IV+AATNR D+LD+ALLR Sbjct: 252 IDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDAALLR 311 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQ+ V +PDV+ R ILKVH + KK VSLE +A RT GF+G Sbjct: 312 PGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAA 371 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGMEGT 452 RRG I+ KEIDD+IDR++AGMEGT Sbjct: 372 ILAVRRGLKQITWKEIDDAIDRVIAGMEGT 401
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 176 bits (445), Expect = 3e-44 Identities = 89/150 (59%), Positives = 104/150 (69%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQTLNQLLTEMDGFEGN+GIIV+AATNR D+LD ALLR Sbjct: 309 IDEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLR 368 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV+VD PDV+GR IL +H NKK +V L IA RTPGF+G Sbjct: 369 PGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAA 428 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGMEGT 452 RR + I+ E++D+IDR+VAGMEGT Sbjct: 429 IFTARRRKEAITMAEVNDAIDRVVAGMEGT 458
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 169 bits (429), Expect = 2e-42 Identities = 88/148 (59%), Positives = 99/148 (66%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQTLNQLLTEMDGFEGNTGII+VAATNR D+LDSAL+R Sbjct: 259 IDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMR 318 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV VD PD GR EIL VH K DV L+ IA RTPGF+G Sbjct: 319 PGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAA 378 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 RR T IS E++D+IDR++AG E Sbjct: 379 ILAARRNLTEISMDEVNDAIDRVLAGPE 406
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 163 bits (413), Expect = 2e-40 Identities = 84/148 (56%), Positives = 98/148 (66%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLR Sbjct: 348 IDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLR 407 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV+VD PDV GR +ILKVH K DV E +A RTPGF+G Sbjct: 408 PGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAA 467 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 RR IS EI D+++RI+AG E Sbjct: 468 ILAARRELKEISKDEISDALERIIAGPE 495
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 161 bits (408), Expect = 6e-40 Identities = 81/146 (55%), Positives = 99/146 (67%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV +DEREQTLNQLL EMDGF N GII++AATNRADILD ALLR Sbjct: 259 IDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLR 318 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQ++VD PDV GR +LKVH NK D V+L+ IAMRTPGFSG Sbjct: 319 PGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAA 378 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAG 440 R+ + I +++ID++ DR++AG Sbjct: 379 LVAARQNKKKIDARDIDEATDRVIAG 404
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 160 bits (406), Expect = 1e-39 Identities = 82/146 (56%), Positives = 97/146 (66%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV +DEREQTLNQLL EMDGF N GII++AATNRADILD ALLR Sbjct: 264 IDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLR 323 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQ+ V+ PDV GR E+LKVH NK + DV+L+ IA RTPGFSG Sbjct: 324 PGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAA 383 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAG 440 R T IS I+++IDR++AG Sbjct: 384 LVAARHDHTKISMIHIEEAIDRVIAG 409
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 160 bits (406), Expect = 1e-39 Identities = 83/148 (56%), Positives = 98/148 (66%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLR Sbjct: 351 IDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLR 410 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV+VD PDV GR +IL+VH K DV E IA RTPG++G Sbjct: 411 PGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAA 470 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 RR IS EI D+++RI+AG E Sbjct: 471 ILAARRELKEISKDEISDALERIIAGPE 498
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 160 bits (406), Expect = 1e-39 Identities = 82/148 (55%), Positives = 98/148 (66%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLR Sbjct: 360 IDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLR 419 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV+VD PDV GR +IL+VH K DV + +A RTPGF+G Sbjct: 420 PGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAA 479 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 RR IS EI D+++RI+AG E Sbjct: 480 ILAARRELKEISKDEISDALERIIAGPE 507
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 160 bits (404), Expect = 2e-39 Identities = 83/148 (56%), Positives = 98/148 (66%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLR Sbjct: 351 IDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLR 410 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV+VD PDV GR +IL+VH K DV + IA RTPGF+G Sbjct: 411 PGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAA 470 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 RR IS EI D+++RI+AG E Sbjct: 471 ILAARRDLKEISKDEIADALERIIAGPE 498
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 159 bits (403), Expect = 2e-39 Identities = 82/148 (55%), Positives = 97/148 (65%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLR Sbjct: 328 IDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLR 387 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PG+FDRQV+VD PDV GR IL+VH K DV + IA RTPGF+G Sbjct: 388 PGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAA 447 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 RR IS EI D+++RI+AG E Sbjct: 448 ILAARRDLKEISKDEISDALERIIAGPE 475
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 157 bits (398), Expect = 9e-39 Identities = 82/149 (55%), Positives = 99/149 (66%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQTLNQLLTEMDGF+ N G+IVV ATNRADILD+ALLR Sbjct: 284 IDEIDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADILDAALLR 343 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV+V++PD GR ILKVH NK DVSL +A RTPGFSG Sbjct: 344 PGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEAA 403 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGMEG 449 R ++ I+ E++++ DRI+ G+ G Sbjct: 404 ILATRYKKSSITKNEVNEAADRIIGGIAG 432
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 157 bits (398), Expect = 9e-39 Identities = 80/146 (54%), Positives = 98/146 (67%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQTLNQLL EMDGFEGN GIIV+AATNR+D+LD ALLR Sbjct: 285 IDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLR 344 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR+V V PDV+GR ILKVH NK DV L+++A +TPGF G Sbjct: 345 PGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAA 404 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAG 440 RR ++ I + +ID++ DR++AG Sbjct: 405 LVAARRNKSIIDASDIDEAEDRVIAG 430
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 157 bits (398), Expect = 9e-39 Identities = 80/146 (54%), Positives = 98/146 (67%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQTLNQLL EMDGFEGN GIIV+AATNR+D+LD ALLR Sbjct: 285 IDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLR 344 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR+V V PDV+GR ILKVH NK DV L+++A +TPGF G Sbjct: 345 PGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAA 404 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAG 440 RR ++ I + +ID++ DR++AG Sbjct: 405 LVAARRNKSIIDASDIDEAEDRVIAG 430
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 155 bits (392), Expect = 5e-38 Identities = 81/149 (54%), Positives = 99/149 (66%), Gaps = 1/149 (0%) Frame = +3 Query: 3 VDEIDAVXXXXXXX-XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALL 179 +DEIDAV +DEREQTLNQLL EMDGF+ + GIIV+AATNR DILD ALL Sbjct: 253 IDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALL 312 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXX 359 RPGRFDRQ+ + PDVRGR EILKVH NKK DV LE +A TPGF+G Sbjct: 313 RPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEA 372 Query: 360 XXXXGRRGRTGISSKEIDDSIDRIVAGME 446 R+G+ I+ +EI++++DRI G+E Sbjct: 373 ALLAARKGKEEITMEEIEEALDRITMGLE 401
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 145 bits (365), Expect = 6e-35 Identities = 76/148 (51%), Positives = 91/148 (61%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLR Sbjct: 250 IDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLR 309 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV V +PDVRGR +ILKVH D+ +IA TPGFSG Sbjct: 310 PGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAA 369 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 R + +S E + + D+I+ G E Sbjct: 370 LFAARGNKRVVSMVEFEKAKDKIMMGAE 397
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 145 bits (365), Expect = 6e-35 Identities = 76/148 (51%), Positives = 91/148 (61%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLR Sbjct: 250 IDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLR 309 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV V +PDVRGR +ILKVH D+ +IA TPGFSG Sbjct: 310 PGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAA 369 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 R + +S E + + D+I+ G E Sbjct: 370 LFAARGNKRVVSMVEFEKAKDKIMMGAE 397
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 144 bits (364), Expect = 8e-35 Identities = 76/148 (51%), Positives = 91/148 (61%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLR Sbjct: 250 IDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLR 309 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV V +PDVRGR +ILKVH D+ +IA TPGFSG Sbjct: 310 PGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA 369 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 R + +S E + + D+I+ G E Sbjct: 370 LFAARGNKRVVSMVEFEKAKDKIMMGAE 397
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 144 bits (364), Expect = 8e-35 Identities = 76/148 (51%), Positives = 91/148 (61%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLR Sbjct: 250 IDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLR 309 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV V +PDVRGR +ILKVH D+ +IA TPGFSG Sbjct: 310 PGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA 369 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 R + +S E + + D+I+ G E Sbjct: 370 LFAARGNKRVVSMVEFEKAKDKIMMGAE 397
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 144 bits (364), Expect = 8e-35 Identities = 76/148 (51%), Positives = 91/148 (61%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLR Sbjct: 250 IDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLR 309 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV V +PDVRGR +ILKVH D+ +IA TPGFSG Sbjct: 310 PGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA 369 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 R + +S E + + D+I+ G E Sbjct: 370 LFAARGNKRVVSMVEFEKAKDKIMMGAE 397
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 142 bits (357), Expect = 5e-34 Identities = 68/147 (46%), Positives = 94/147 (63%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQTLNQ+L EMDGFE N G++++AATNR D+LD ALLR Sbjct: 253 IDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLR 312 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQ++V PD+ GR +ILKVH K+++ V +IA TPGFSG Sbjct: 313 PGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAA 372 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGM 443 R G+ + +++++ D+++ G+ Sbjct: 373 LIAARLGKKEVDMHDMEEAKDKVLMGV 399
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 142 bits (357), Expect = 5e-34 Identities = 68/147 (46%), Positives = 94/147 (63%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV NDEREQTLNQ+L EMDGFE N G++++AATNR D+LD ALLR Sbjct: 253 IDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLR 312 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQ++V PD+ GR +ILKVH K+++ V +IA TPGFSG Sbjct: 313 PGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAA 372 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGM 443 R G+ + +++++ D+++ G+ Sbjct: 373 LIAARLGKKEVDMHDMEEAKDKVLMGV 399
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 141 bits (355), Expect = 9e-34 Identities = 72/147 (48%), Positives = 94/147 (63%), Gaps = 1/147 (0%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN-TGIIVVAATNRADILDSALL 179 +DEIDAV NDEREQTLNQLL EMDGF+ + +IV+AATNR+D+LD ALL Sbjct: 291 IDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDPALL 350 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXX 359 RPGRFDR+V V PDV+GR +LKVH NK +DV L +A +TPG+ G Sbjct: 351 RPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEA 410 Query: 360 XXXXGRRGRTGISSKEIDDSIDRIVAG 440 R+ + I++ +ID+ +DR +AG Sbjct: 411 ALVAARQNKKEINAADIDEGMDRAMAG 437
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 140 bits (354), Expect = 1e-33 Identities = 70/146 (47%), Positives = 91/146 (62%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID+V EQTLNQLL EMDGF TG++V+AATNR D+LD ALLR Sbjct: 329 IDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLR 388 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + +++PD++ R ILKVH NK + +SL +A RTPGFSG Sbjct: 389 PGRFDRHIQINLPDIKEREGILKVHAENKNLSSKISLLDVAKRTPGFSGAQLENVINEAT 448 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAG 440 R RT I+ +ID++IDR++AG Sbjct: 449 LLAVRDNRTTININDIDEAIDRVIAG 474
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 139 bits (351), Expect = 3e-33 Identities = 69/146 (47%), Positives = 91/146 (62%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID+V EQTLNQLL EMDGF TG++V+AATNR D+LD ALLR Sbjct: 326 IDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLR 385 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + +++PD++ R IL+VH NK + +SL +A RTPGFSG Sbjct: 386 PGRFDRHIQINLPDIKEREGILQVHAKNKNLSSKISLLDVAKRTPGFSGAQLENVINEAT 445 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAG 440 R RT I+ +ID++IDR++AG Sbjct: 446 LLAVRDNRTTINMNDIDEAIDRVIAG 471
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 139 bits (351), Expect = 3e-33 Identities = 73/148 (49%), Positives = 91/148 (61%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV +DEREQTLNQ+L EMDGF+GN GII++AATNR D+LD ALLR Sbjct: 250 IDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLR 309 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV V +PD+RGR +ILKVH DV +IA TPGFSG Sbjct: 310 PGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAA 369 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 R + +S E + + D+++ G E Sbjct: 370 LFAARLDKRVVSMLEFERAKDKMMMGSE 397
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 139 bits (351), Expect = 3e-33 Identities = 68/146 (46%), Positives = 91/146 (62%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DAV NDEREQTLNQ+L EMDG N GI+++ ATNR D+LD ALLR Sbjct: 310 IDELDAVGRSRGSGIGGGNDEREQTLNQILVEMDGINENAGILIMGATNRTDVLDPALLR 369 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR ++V +PD++ R EILK+H K+ ++ + IA RTPG+SG Sbjct: 370 PGRFDRIITVGLPDIKEREEILKLHSKGKRLSKEIKFDKIAKRTPGYSGAQLENVINEAS 429 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAG 440 R I S +ID++IDR++AG Sbjct: 430 LLSVREKTDVIISTQIDEAIDRVMAG 455
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 138 bits (347), Expect = 8e-33 Identities = 73/148 (49%), Positives = 89/148 (60%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV +DEREQTLNQ+L EMDGF+GN G+I++AATNR D+LD ALLR Sbjct: 250 IDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLR 309 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV V +PDVRGR +ILKVH DV +IA TPGFSG Sbjct: 310 PGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAA 369 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 R +S + + D+I+ G E Sbjct: 370 LFAARFNNRVVSMIHFEKAKDKIMMGSE 397
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 137 bits (345), Expect = 1e-32 Identities = 67/148 (45%), Positives = 94/148 (63%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ NDEREQTLNQLL EMDGF+ TG+I++AATNR D+LD ALLR Sbjct: 239 IDELDAIGKSRLNAIHS-NDEREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALLR 297 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV VD PD++GR IL++H N K +V L+ +A T G+SG Sbjct: 298 PGRFDRQVCVDRPDLKGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAA 357 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 R GR + ++D+++++ + G++ Sbjct: 358 LLAVRSGRAQVIETDLDEAVEKTMIGLQ 385
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 135 bits (341), Expect = 4e-32 Identities = 69/148 (46%), Positives = 89/148 (60%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV +DEREQTLNQ+L EMDGF+GN GII++AATNR D+LD ALLR Sbjct: 250 IDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLR 309 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQ+ V +PD+RGR +I++VH +V +IA TPGFSG Sbjct: 310 PGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAA 369 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 R R + + + + D+I G E Sbjct: 370 LFAARNNRDVVMMSDFESAKDKITMGSE 397
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 134 bits (338), Expect = 8e-32 Identities = 68/146 (46%), Positives = 87/146 (59%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 VDEIDAV +DEREQTLNQLL EMDGF G+I++AATNR DILD ALLR Sbjct: 261 VDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLR 320 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQ+ V PD+ GR +L+VH K AD L+ +A RT G +G Sbjct: 321 PGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAA 380 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAG 440 R T I+ +++++DR++ G Sbjct: 381 LLTARENGTVITGPALEEAVDRVIGG 406
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 134 bits (338), Expect = 8e-32 Identities = 68/146 (46%), Positives = 87/146 (59%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 VDEIDAV +DEREQTLNQLL EMDGF G+I++AATNR DILD ALLR Sbjct: 261 VDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLR 320 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQ+ V PD+ GR +L+VH K AD L+ +A RT G +G Sbjct: 321 PGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAA 380 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAG 440 R T I+ +++++DR++ G Sbjct: 381 LLTARENGTVITGPALEEAVDRVIGG 406
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 133 bits (334), Expect = 2e-31 Identities = 70/148 (47%), Positives = 87/148 (58%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV +DEREQTLNQ+L EMDGF GN G+IV+AATNR D+LD AL R Sbjct: 249 IDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTR 308 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQV V +PDV+GR +ILKVH DV +A TPG+SG Sbjct: 309 PGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAA 368 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 R + ++ E + + D+I G E Sbjct: 369 LFAARVNKRTVTMLEFEKAKDKINMGPE 396
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 132 bits (331), Expect = 5e-31 Identities = 70/150 (46%), Positives = 93/150 (62%), Gaps = 2/150 (1%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXX-NDEREQTLNQLLTEMDGFEG-NTGIIVVAATNRADILDSAL 176 +DE+DA+ NDEREQTLNQLLTEMDGF +IV+AATNR + LD AL Sbjct: 272 IDELDAIGKSRASGAFMGGNDEREQTLNQLLTEMDGFSAAGATVIVLAATNRPETLDPAL 331 Query: 177 LRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXX 356 LRPGRFDRQV VD PD+ GR +IL+++ K D +V L+ IA RTPGF+G Sbjct: 332 LRPGRFDRQVLVDRPDLAGRLKILEIYAKKIKLDKEVELKNIATRTPGFAGADLANLVNE 391 Query: 357 XXXXXGRRGRTGISSKEIDDSIDRIVAGME 446 R + ++ + ++I+R+VAG+E Sbjct: 392 AALLAARNKQDSVTEADFREAIERVVAGLE 421
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 130 bits (326), Expect = 2e-30 Identities = 66/146 (45%), Positives = 85/146 (58%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 VDEIDAV +DEREQTLNQLL EMDGF G+I++AATNR DILD ALLR Sbjct: 261 VDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLR 320 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDRQ+ V PD+ GR +L+VH K D L+ +A RT G +G Sbjct: 321 PGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADLANVVNEAA 380 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAG 440 R I+ +++++DR++ G Sbjct: 381 LLTARENGLVITGPALEEAVDRVIGG 406
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 129 bits (325), Expect = 3e-30 Identities = 72/150 (48%), Positives = 90/150 (60%), Gaps = 2/150 (1%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXX-NDEREQTLNQLLTEMDGFEG-NTGIIVVAATNRADILDSAL 176 +DEIDA+ NDEREQTLNQLL EMDGF N +IV+AATNR +ILD AL Sbjct: 274 IDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPAL 333 Query: 177 LRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXX 356 LRPGRFDRQV VD PD +GR EILKVH K DV L+ IA T G +G Sbjct: 334 LRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADLANIINE 393 Query: 357 XXXXXGRRGRTGISSKEIDDSIDRIVAGME 446 GR + + + + ++++R +AG+E Sbjct: 394 AALLAGRNNQKEVKQQHLKEAVERGIAGLE 423
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 129 bits (323), Expect = 5e-30 Identities = 70/150 (46%), Positives = 90/150 (60%), Gaps = 2/150 (1%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXX-NDEREQTLNQLLTEMDGFEG-NTGIIVVAATNRADILDSAL 176 +DEIDA+ NDEREQTLNQLL EMDGF N +IV+AATNR +ILD AL Sbjct: 268 IDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPAL 327 Query: 177 LRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXX 356 +RPGRFDRQV VD PD GR EILKVH K DV+L+ +A T G +G Sbjct: 328 MRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINE 387 Query: 357 XXXXXGRRGRTGISSKEIDDSIDRIVAGME 446 GR + + + + ++++R +AG+E Sbjct: 388 AALLAGRNNQKEVKQQHLKEAVERGIAGLE 417
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 128 bits (322), Expect = 6e-30 Identities = 70/150 (46%), Positives = 90/150 (60%), Gaps = 2/150 (1%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXX-NDEREQTLNQLLTEMDGFEG-NTGIIVVAATNRADILDSAL 176 +DEIDA+ NDEREQTLNQLL EMDGF N +IV+AATNR +ILD AL Sbjct: 268 IDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPAL 327 Query: 177 LRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXX 356 +RPGRFDRQV VD PD GR EILKVH K DV+L+ +A T G +G Sbjct: 328 MRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINE 387 Query: 357 XXXXXGRRGRTGISSKEIDDSIDRIVAGME 446 GR + + + + ++++R +AG+E Sbjct: 388 AALLAGRNNQKEVRQQHLKEAVERGIAGLE 417
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 124 bits (312), Expect = 9e-29 Identities = 64/130 (49%), Positives = 80/130 (61%) Frame = +3 Query: 57 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 236 +DEREQTLNQ+L EMDGF GN G+IV+AATNR D+LD AL RPGRFDRQV V +PDV+GR Sbjct: 13 HDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGR 72 Query: 237 TEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDD 416 +ILKVH DV +A TPG+SG R + ++ E + Sbjct: 73 EQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEK 132 Query: 417 SIDRIVAGME 446 + D+I G E Sbjct: 133 AKDKINMGPE 142
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 122 bits (306), Expect = 4e-28 Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 4/152 (2%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV E+E TLNQLL EMDGF T ++++A TNR DILD ALLR Sbjct: 406 IDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLR 465 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMR----TPGFSGXXXXXXX 350 PGRFDRQ+ + PD++GR I KVH K D+ + + +A + TPGFSG Sbjct: 466 PGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVC 525 Query: 351 XXXXXXXGRRGRTGISSKEIDDSIDRIVAGME 446 R I+ K + +I+R++ G+E Sbjct: 526 NEAALIAARHLSDSINQKHFEQAIERVIGGLE 557
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 122 bits (305), Expect = 6e-28 Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 4/152 (2%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV E+E TLNQLL EMDGF T ++++A TNR DILD ALLR Sbjct: 405 IDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLR 464 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMR----TPGFSGXXXXXXX 350 PGRFDRQ+ + PD++GR I KVH K D+ + + +A + TPGFSG Sbjct: 465 PGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVC 524 Query: 351 XXXXXXXGRRGRTGISSKEIDDSIDRIVAGME 446 R I+ K + +I+R++ G+E Sbjct: 525 NEAALIAARHLSDAINEKHFEQAIERVIGGLE 556
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 119 bits (298), Expect = 4e-27 Identities = 58/152 (38%), Positives = 85/152 (55%), Gaps = 4/152 (2%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ E+E TLNQ+L EMDGF +T ++V+A TNR DILD AL R Sbjct: 272 IDEIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTR 331 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMR----TPGFSGXXXXXXX 350 PGRFDRQ+ + PD++GR+ I KVH K D +S + ++ + TPGF+G Sbjct: 332 PGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVC 391 Query: 351 XXXXXXXGRRGRTGISSKEIDDSIDRIVAGME 446 R + + + +I+R++ G+E Sbjct: 392 NEAALIAARHLSPSVQERHFEQAIERVIGGLE 423
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 115 bits (287), Expect = 7e-26 Identities = 64/148 (43%), Positives = 88/148 (59%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+D+V + QT+NQLL EMDGF+ N G+I++ ATN + LD+AL+R Sbjct: 437 IDELDSVGGKRIESPM--HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIR 494 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFD QV+V PDV+GRTEILK + + KFD V E+IA T GFSG Sbjct: 495 PGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAA 554 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 G+ ++ KE++ S D+I+ G E Sbjct: 555 LKAAVDGKEMVTMKELEFSKDKILMGPE 582
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 115 bits (287), Expect = 7e-26 Identities = 64/148 (43%), Positives = 88/148 (59%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+D+V + QT+NQLL EMDGF+ N G+I++ ATN + LD+AL+R Sbjct: 379 IDELDSVGGKRIESPM--HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIR 436 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFD QV+V PDV+GRTEILK + + KFD V E+IA T GFSG Sbjct: 437 PGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAA 496 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 G+ ++ KE++ S D+I+ G E Sbjct: 497 LKAAVDGKEMVTMKELEFSKDKILMGPE 524
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 112 bits (280), Expect = 4e-25 Identities = 61/156 (39%), Positives = 86/156 (55%), Gaps = 8/156 (5%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXX--XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSAL 176 +DEIDA+ NDERE TLNQLL EMDGF + ++V+A TNR D+LD+AL Sbjct: 386 IDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNAL 445 Query: 177 LRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEV------IAMRTPGFSGXXX 338 +RPGRFDR + +D PDV GR +I VH D ++ ++ +A TPGF+G Sbjct: 446 MRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADI 505 Query: 339 XXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVAGME 446 R I+ + +I+R++AG+E Sbjct: 506 ANACNEAALIAARHNDPYITIHHFEQAIERVIAGLE 541
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 111 bits (277), Expect = 1e-24 Identities = 63/148 (42%), Positives = 87/148 (58%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+D+V + QT+ QLL EMDGF+ N G+I++ ATN + LD+AL+R Sbjct: 379 IDELDSVGGKRIEFPM--HPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIR 436 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFD QV+V PDV+GRTEILK + + KFD V E+IA T GFSG Sbjct: 437 PGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAA 496 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 G+ ++ KE++ S D+I+ G E Sbjct: 497 LKAAVDGKEMVTMKELEFSKDKILMGPE 524
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 110 bits (275), Expect = 2e-24 Identities = 59/151 (39%), Positives = 81/151 (53%), Gaps = 3/151 (1%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXX-XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALL 179 +DEIDA+ NDERE TLNQ+L EMDGF ++V+A TNR DILD ALL Sbjct: 446 IDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALL 505 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADV--SLEVIAMRTPGFSGXXXXXXXX 353 RPGRFDR +++D P++ GR I VH + K ++ +A TPGFSG Sbjct: 506 RPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCN 565 Query: 354 XXXXXXGRRGRTGISSKEIDDSIDRIVAGME 446 R + + +I+R++ G+E Sbjct: 566 EAALIAARSDEDAVKLNHFEQAIERVIGGVE 596
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 109 bits (273), Expect = 3e-24 Identities = 57/148 (38%), Positives = 84/148 (56%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++T+ QLL E+DGF+ + V+AATNR D++D A+LR Sbjct: 238 IDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLR 297 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + V +P +RGR EIL +H K DV LE IA T GFSG Sbjct: 298 PGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAG 357 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 RRG I+ ++ +++++ A ++ Sbjct: 358 YNAIRRGSRVITMDDMIKAVEKVKAALD 385
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 109 bits (272), Expect = 4e-24 Identities = 55/143 (38%), Positives = 84/143 (58%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ E ++TL QLL E+DGF+ + ++AATNR DILD ALLR Sbjct: 233 IDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLR 292 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + V +PD +GRTEI ++ K + +++LE+++ T GFSG Sbjct: 293 PGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAA 352 Query: 363 XXXGRRGRTGISSKEIDDSIDRI 431 R GR ++ ++ ++I++I Sbjct: 353 YMAIRDGRNKVTMNDLVEAINKI 375
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 108 bits (270), Expect = 6e-24 Identities = 59/144 (40%), Positives = 81/144 (56%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV + E ++TL QLL E+DGFE + +VAATNR DILD ALLR Sbjct: 250 IDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLR 309 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + V +P+ GR EILK+H S +V +E++A T G SG Sbjct: 310 PGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAG 369 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ + D++D+I+ Sbjct: 370 MFAIRDERDEVTMADFMDAVDKIM 393
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 107 bits (266), Expect = 2e-23 Identities = 60/149 (40%), Positives = 82/149 (55%), Gaps = 3/149 (2%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXX-XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALL 179 +DEIDAV N E EQTLNQLL EMDG +IV+A+TNRADILD AL+ Sbjct: 407 IDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALM 466 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSL--EVIAMRTPGFSGXXXXXXXX 353 RPGR DR V +D+P ++ R EI + H + K + + +A TPGFSG Sbjct: 467 RPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICN 526 Query: 354 XXXXXXGRRGRTGISSKEIDDSIDRIVAG 440 R G T + + + +++R++AG Sbjct: 527 EAALHAAREGHTSVHTLNFEYAVERVLAG 555
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 107 bits (266), Expect = 2e-23 Identities = 61/144 (42%), Positives = 79/144 (54%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ E +TL QLL EMDGF+ + V+AATNR DILD ALLR Sbjct: 239 IDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLR 298 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + V +PD GR EILKVH K +V L VIA T G SG Sbjct: 299 PGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAG 357 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R RT ++ ++ ++D+++ Sbjct: 358 MFAIRERRTYVTQEDFLKAVDKVL 381
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 106 bits (264), Expect = 3e-23 Identities = 58/148 (39%), Positives = 79/148 (53%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++TL QLL EMDGF+ I V+AATNR DILD ALLR Sbjct: 278 IDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLR 337 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + + +PD GR EI K+H + DV L+ +A T G SG Sbjct: 338 PGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAG 397 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 R R ++ + ++DR++ E Sbjct: 398 MMAIREDRDIVTMDDFLKAVDRVMGKKE 425
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 105 bits (263), Expect = 4e-23 Identities = 60/144 (41%), Positives = 77/144 (53%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ E +TL QLL EMDGF+ + V+AATNR DILD ALLR Sbjct: 239 IDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLR 298 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + V +PD GR EILKVH K V L IA T G SG Sbjct: 299 PGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKG-VDLRAIAEMTEGASGADLKAIATEAG 357 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R RT ++ ++ ++D+++ Sbjct: 358 MFAIRERRTYVTQEDFLKAVDKVL 381
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 105 bits (263), Expect = 4e-23 Identities = 61/144 (42%), Positives = 78/144 (54%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ E +TL QLL EMDGF+ + V+AATNR DILD ALLR Sbjct: 236 IDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLR 295 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + V +PD GR EILKVH K V L +IA T G SG Sbjct: 296 PGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-RGVDLRLIAELTEGASGADLKAIATEAG 354 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R RT ++ ++ +ID+++ Sbjct: 355 MFAIRERRTYVTQEDFLKAIDKVL 378
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 104 bits (260), Expect = 9e-23 Identities = 61/144 (42%), Positives = 79/144 (54%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ E +TL QLL EMDGF+ + V+AATNR DILD ALLR Sbjct: 237 IDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLR 296 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + V +PD +GR EILKVH + K V L VIA T G SG Sbjct: 297 PGRFDRLIEVPLPDYQGRLEILKVH-TRKMNLKGVDLRVIAEITEGASGADLKAIATEAG 355 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R RT ++ + ++D+++ Sbjct: 356 MFAIRDRRTYVTQDDFLKAVDKVI 379
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 103 bits (258), Expect = 2e-22 Identities = 54/145 (37%), Positives = 81/145 (55%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ E ++TL QLL E+DGF+ + ++AATNR DILD ALLR Sbjct: 233 IDEIDAIGAKRVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLR 292 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + V +P+ GR EI +++ K D ++ +++A T GFSG Sbjct: 293 PGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAG 352 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVA 437 R GR ++ ++ +I++I A Sbjct: 353 YIAIRNGRKYVNMTDLITAIEKIKA 377
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 103 bits (256), Expect = 3e-22 Identities = 55/144 (38%), Positives = 77/144 (53%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++TL QLL EMDGF+ + ++ ATNR DILD A+LR Sbjct: 269 IDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILR 328 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + V PD +GR EILK+H DV+LE IA T G G Sbjct: 329 PGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAG 388 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ + ++++I+ Sbjct: 389 MNAIRELRDYVTMDDFRKAVEKIM 412
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 100 bits (250), Expect = 1e-21 Identities = 56/148 (37%), Positives = 78/148 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ +QTLNQLL E+DGF +GII++ ATN + LD AL R Sbjct: 379 IDELDAIGGKRNPKDQAY---AKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTR 435 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFD+ V+VD+PDVRGR +ILK H +V +IA TPG SG Sbjct: 436 PGRFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAA 495 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 ++ + + + D+I+ G E Sbjct: 496 VYACQKNAVSVDMSHFEWAKDKILMGAE 523
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 99.8 bits (247), Expect = 3e-21 Identities = 49/143 (34%), Positives = 77/143 (53%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+D++ + E ++TL QLL EMDGF+ I ++AATNR D+LD A+LR Sbjct: 258 IDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILR 317 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR V V +P + R +ILK+H D+ + +A T G SG Sbjct: 318 PGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAG 377 Query: 363 XXXGRRGRTGISSKEIDDSIDRI 431 RR + + +E ++++++ Sbjct: 378 MFAVRRDKELVEMEEFLEAVEKV 400
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 98.2 bits (243), Expect = 9e-21 Identities = 53/145 (36%), Positives = 76/145 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV + E ++T+ QLL+EMDGF+ I ++AATNR D+LDSA+LR Sbjct: 251 IDEIDAVAAKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILR 310 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + V P+ R IL++H V +A T FSG Sbjct: 311 PGRFDRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEAG 370 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVA 437 R R + ++ DD+ +++VA Sbjct: 371 MFAIRDDRDEVHRQDFDDAYEKLVA 395
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 97.4 bits (241), Expect = 1e-20 Identities = 47/143 (32%), Positives = 77/143 (53%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+D++ + E ++TL QLL EMDGF+ I ++AATNR D+LD A+LR Sbjct: 258 IDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILR 317 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR V V +P + R +ILK+H D+ + +A T G SG Sbjct: 318 PGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAG 377 Query: 363 XXXGRRGRTGISSKEIDDSIDRI 431 R+ + + ++ ++++++ Sbjct: 378 MFAVRKDKALVEMEDFLEAVEKV 400
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 97.4 bits (241), Expect = 1e-20 Identities = 55/146 (37%), Positives = 78/146 (53%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID+V + QT+NQLL+EMDGF N GIIV+AATNR D LD ALLR Sbjct: 299 IDEIDSVGSKRVSNSI--HPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLR 356 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFD +V+V PD+ GR +I + S + +V+A + GF+G Sbjct: 357 PGRFDVRVTVPKPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAA 416 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAG 440 ++ +D++ DR++ G Sbjct: 417 LKAATDNAVEVTMAYLDEARDRVLMG 442
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 97.1 bits (240), Expect = 2e-20 Identities = 46/147 (31%), Positives = 80/147 (54%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+DA+ ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRP Sbjct: 268 DEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRP 327 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXX 365 GR DR+V +PD+ GRT+I K+H + D+ E++A P +G Sbjct: 328 GRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM 387 Query: 366 XXGRRGRTGISSKEIDDSIDRIVAGME 446 R R ++ K+ D++++++ G + Sbjct: 388 YAIRARRKTVTEKDFLDAVNKVIKGYQ 414
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 97.1 bits (240), Expect = 2e-20 Identities = 46/147 (31%), Positives = 80/147 (54%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+DA+ ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRP Sbjct: 268 DEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRP 327 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXX 365 GR DR+V +PD+ GRT+I K+H + D+ E++A P +G Sbjct: 328 GRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM 387 Query: 366 XXGRRGRTGISSKEIDDSIDRIVAGME 446 R R ++ K+ D++++++ G + Sbjct: 388 YAIRARRKTVTEKDFLDAVNKVIKGYQ 414
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 95.9 bits (237), Expect = 4e-20 Identities = 49/144 (34%), Positives = 75/144 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + E ++T+ QLL E+DGF+ + V+ ATNR DILD A+LR Sbjct: 240 IDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILR 299 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + V +P GR +I K+H K DV + +A T G SG Sbjct: 300 PGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAG 359 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ + +I++++ Sbjct: 360 MFAIREERAKVTMLDFTKAIEKVL 383
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 95.9 bits (237), Expect = 4e-20 Identities = 49/145 (33%), Positives = 78/145 (53%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDA+ ++E ++T+ +L+T++DGF+ I V+ ATNR + LD AL+RP Sbjct: 279 DEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRP 338 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXX 365 GR DR+V +PD+ GR IL++H + D D+ E+IA P +G Sbjct: 339 GRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGM 398 Query: 366 XXGRRGRTGISSKEIDDSIDRIVAG 440 R R + K+ D++ ++V G Sbjct: 399 FAIRARRRVATEKDFLDAVQKVVKG 423
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 94.7 bits (234), Expect = 1e-19 Identities = 45/147 (30%), Positives = 79/147 (53%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+DA+ ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRP Sbjct: 267 DEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRP 326 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXX 365 GR DR+V +PD+ RT+I K+H + D+ E++A P +G Sbjct: 327 GRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM 386 Query: 366 XXGRRGRTGISSKEIDDSIDRIVAGME 446 R R ++ K+ D++++++ G + Sbjct: 387 YAIRARRKTVTEKDFLDAVNKVIKGYQ 413
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 94.7 bits (234), Expect = 1e-19 Identities = 45/147 (30%), Positives = 79/147 (53%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+DA+ ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRP Sbjct: 268 DEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRP 327 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXX 365 GR DR+V +PD+ RT+I K+H + D+ E++A P +G Sbjct: 328 GRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM 387 Query: 366 XXGRRGRTGISSKEIDDSIDRIVAGME 446 R R ++ K+ D++++++ G + Sbjct: 388 YAIRARRKTVTEKDFLDAVNKVIKGYQ 414
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 94.4 bits (233), Expect = 1e-19 Identities = 48/108 (44%), Positives = 67/108 (62%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDA+ ++ +NQLLTE+DG E ++V+AATNR DI+D ALLRP Sbjct: 552 DEIDAIAPKRGRDLSSAVTDK--VVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRP 609 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GR DR + V VPD + R +I K+H + DV+LE +A +T G++G Sbjct: 610 GRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTG 657 Score = 88.6 bits (218), Expect = 7e-18 Identities = 47/109 (43%), Positives = 64/109 (58%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + + + QLLT MDG +G ++V+ ATNR + LD AL R Sbjct: 278 IDEIDAIAPKRDEAT---GEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRR 334 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 PGRFDR++ + VPD GR EIL++H N DV L+ +A T GF G Sbjct: 335 PGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVG 383
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 94.4 bits (233), Expect = 1e-19 Identities = 52/146 (35%), Positives = 77/146 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID+V + QT+NQLL EMDGF+ GIIV+ ATN+A++LD ALLR Sbjct: 264 IDEIDSVGGNRTFSPH--HPFANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLR 321 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFD Q+ V P GR +L ++ K +++ +E +A T G++G Sbjct: 322 PGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAA 381 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAG 440 R + + D+ DR++ G Sbjct: 382 IAAALRNDPFVEMHHLWDARDRLIMG 407
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 94.0 bits (232), Expect = 2e-19 Identities = 53/108 (49%), Positives = 64/108 (59%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEID++ ER +NQLL EMDG ++++AATNR DILD ALLRP Sbjct: 587 DEIDSIAPIRGLSTDSGVTER--IVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRP 644 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GRFDR + V PD R EILKVH N DVSLE IA + G++G Sbjct: 645 GRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTG 692 Score = 90.1 bits (222), Expect = 2e-18 Identities = 46/109 (42%), Positives = 66/109 (60%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + ++ + QLLT MDG +G +IV+ ATNR D +D AL R Sbjct: 311 IDEIDAIAPKREDVT---GEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRR 367 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 PGRFDR++ + PD +GR +IL+VH N DV L+ +A T G++G Sbjct: 368 PGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTG 416
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 93.2 bits (230), Expect = 3e-19 Identities = 55/148 (37%), Positives = 74/148 (50%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV + E ++TL QLL EMDGF+ + ++AATNR DILD A+LR Sbjct: 247 IDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILR 306 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + + +PD GR EILK+H + K V L +A G Sbjct: 307 PGRFDRIIEISMPDEDGRLEILKIH-TEKMNLKGVDLREVAKIAENMVGADLKAVCTEAG 365 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVAGME 446 R R I + ++I +I E Sbjct: 366 MFAIREEREFIKMDDFREAISKITGKKE 393
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 93.2 bits (230), Expect = 3e-19 Identities = 57/151 (37%), Positives = 75/151 (49%), Gaps = 3/151 (1%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+D++ + + + QLLT MDG EG +IV+AATNR D +D AL R Sbjct: 288 IDELDSIAPKREDVT---GEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRR 344 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR++ + VPD GR EILK+H DV+L +A T GF G Sbjct: 345 PGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAA 404 Query: 363 XXXGRRGRTGISSKEID---DSIDRIVAGME 446 RR I E D IDR++ E Sbjct: 405 MRALRRYLPEIDLDEEDIPPSLIDRMIVKRE 435 Score = 92.8 bits (229), Expect = 4e-19 Identities = 46/91 (50%), Positives = 61/91 (67%) Frame = +3 Query: 57 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 236 N+ E+ +NQLLTE+DG E ++V+AATNR DI+D AL+R GRFDR V V P + GR Sbjct: 577 NNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGR 636 Query: 237 TEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 +ILK+H + ADVSL +A R G+ G Sbjct: 637 EQILKIHTQDTPLAADVSLRELAERADGYVG 667
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 92.4 bits (228), Expect = 5e-19 Identities = 48/145 (33%), Positives = 77/145 (53%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDAV ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RP Sbjct: 277 DEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRP 336 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXX 365 GR DR+V +PD+ GR ILK+H + D+ +++A P +G Sbjct: 337 GRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGM 396 Query: 366 XXGRRGRTGISSKEIDDSIDRIVAG 440 R R + K+ ++I+++V G Sbjct: 397 FAIRARRKVATEKDFLEAINKVVKG 421
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 92.4 bits (228), Expect = 5e-19 Identities = 44/143 (30%), Positives = 77/143 (53%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDA+ ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RP Sbjct: 275 DEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRP 334 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXX 365 GR DR++ +PD+ GRT I K+H + + D+ E++A P +G Sbjct: 335 GRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM 394 Query: 366 XXGRRGRTGISSKEIDDSIDRIV 434 R R + K+ +++++++ Sbjct: 395 FAIRARRKVATEKDFLEAVNKVI 417
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 92.0 bits (227), Expect = 6e-19 Identities = 44/143 (30%), Positives = 77/143 (53%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDA+ ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RP Sbjct: 274 DEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRP 333 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXX 365 GR DR++ +PD+ GRT I K+H + + D+ E++A P +G Sbjct: 334 GRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM 393 Query: 366 XXGRRGRTGISSKEIDDSIDRIV 434 R R + K+ +++++++ Sbjct: 394 FAIRARRKIATEKDFLEAVNKVI 416
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 92.0 bits (227), Expect = 6e-19 Identities = 44/143 (30%), Positives = 77/143 (53%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDA+ ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RP Sbjct: 274 DEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRP 333 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXX 365 GR DR++ +PD+ GRT I K+H + + D+ E++A P +G Sbjct: 334 GRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM 393 Query: 366 XXGRRGRTGISSKEIDDSIDRIV 434 R R + K+ +++++++ Sbjct: 394 FAIRARRKIATEKDFLEAVNKVI 416
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 92.0 bits (227), Expect = 6e-19 Identities = 44/143 (30%), Positives = 77/143 (53%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDA+ ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RP Sbjct: 274 DEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRP 333 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXX 365 GR DR++ +PD+ GRT I K+H + + D+ E++A P +G Sbjct: 334 GRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM 393 Query: 366 XXGRRGRTGISSKEIDDSIDRIV 434 R R + K+ +++++++ Sbjct: 394 FAIRARRKIATEKDFLEAVNKVI 416
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 92.0 bits (227), Expect = 6e-19 Identities = 48/145 (33%), Positives = 77/145 (53%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + E ++T+ +LL ++DGF+ NT + V+AATNR DILD ALLR Sbjct: 285 IDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLR 344 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 GR DR++ +P+ R I+++H DV+ E +A T F+G Sbjct: 345 SGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAG 404 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVA 437 RRG T ++ ++ + I + A Sbjct: 405 MIALRRGATELTHEDYMEGILEVQA 429
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 92.0 bits (227), Expect = 6e-19 Identities = 48/145 (33%), Positives = 77/145 (53%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + E ++T+ +LL ++DGF+ NT + V+AATNR DILD ALLR Sbjct: 285 IDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLR 344 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 GR DR++ +P+ R I+++H DV+ E +A T F+G Sbjct: 345 SGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAG 404 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVA 437 RRG T ++ ++ + I + A Sbjct: 405 MIALRRGATELTHEDYMEGILEVQA 429
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 92.0 bits (227), Expect = 6e-19 Identities = 48/145 (33%), Positives = 77/145 (53%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + E ++T+ +LL ++DGF+ NT + V+AATNR DILD ALLR Sbjct: 288 IDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLR 347 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 GR DR++ +P+ R I+++H DV+ E +A T F+G Sbjct: 348 SGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAG 407 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVA 437 RRG T ++ ++ + I + A Sbjct: 408 MIALRRGATELTHEDHMEGILEVQA 432
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 91.7 bits (226), Expect = 8e-19 Identities = 49/145 (33%), Positives = 77/145 (53%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++T+ +LL ++DGF + I V+AATNRADILD AL+R Sbjct: 265 IDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMR 324 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 GR DR++ P R IL++H +ADV+ E +A T F+G Sbjct: 325 SGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAG 384 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVA 437 RR T ++ ++ ++ I ++ A Sbjct: 385 MLALRRDATEVNHEDFNEGIIQVQA 409
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 91.7 bits (226), Expect = 8e-19 Identities = 47/144 (32%), Positives = 75/144 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + E ++T+ +LL ++DGFE I V+ ATNR DILDSALLR Sbjct: 248 MDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR 307 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ P+ R +ILK+H ++L IA PG SG Sbjct: 308 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAG 367 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ ++ + ++ +++ Sbjct: 368 MYALRERRVHVTQEDFEMAVAKVM 391
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 91.7 bits (226), Expect = 8e-19 Identities = 47/144 (32%), Positives = 75/144 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + E ++T+ +LL ++DGFE I V+ ATNR DILDSALLR Sbjct: 248 MDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR 307 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ P+ R +ILK+H ++L IA PG SG Sbjct: 308 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAG 367 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ ++ + ++ +++ Sbjct: 368 MYALRERRVHVTQEDFEMAVAKVM 391
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 91.7 bits (226), Expect = 8e-19 Identities = 47/144 (32%), Positives = 75/144 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + E ++T+ +LL ++DGFE I V+ ATNR DILDSALLR Sbjct: 248 MDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR 307 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ P+ R +ILK+H ++L IA PG SG Sbjct: 308 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAG 367 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ ++ + ++ +++ Sbjct: 368 MYALRERRVHVTQEDFEMAVAKVM 391
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 91.7 bits (226), Expect = 8e-19 Identities = 47/144 (32%), Positives = 75/144 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + E ++T+ +LL ++DGFE I V+ ATNR DILDSALLR Sbjct: 248 MDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR 307 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ P+ R +ILK+H ++L IA PG SG Sbjct: 308 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAG 367 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ ++ + ++ +++ Sbjct: 368 MYALRERRVHVTQEDFEMAVAKVM 391
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 91.7 bits (226), Expect = 8e-19 Identities = 47/144 (32%), Positives = 75/144 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + E ++T+ +LL ++DGFE I V+ ATNR DILDSALLR Sbjct: 248 MDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR 307 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ P+ R +ILK+H ++L IA PG SG Sbjct: 308 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAG 367 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ ++ + ++ +++ Sbjct: 368 MYALRERRVHVTQEDFEMAVAKVM 391
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 91.3 bits (225), Expect = 1e-18 Identities = 50/110 (45%), Positives = 68/110 (61%), Gaps = 1/110 (0%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTL-NQLLTEMDGFEGNTGIIVVAATNRADILDSALL 179 +DEIDA+ N E E+ + +QLLT MDG +G + ++V+AATNR + +D AL Sbjct: 309 IDEIDAIAPKREKT----NGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALR 364 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 R GRFDR++ + +PD GR EIL++H N K DV LE IA GF G Sbjct: 365 RFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVG 414 Score = 78.2 bits (191), Expect = 9e-15 Identities = 36/87 (41%), Positives = 52/87 (59%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 248 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD R +IL Sbjct: 605 DRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQIL 664 Query: 249 KVHGSNKKFDADVSLEVIAMRTPGFSG 329 K D+ L +A T GFSG Sbjct: 665 KASLRKTPLSKDLDLTFLAKNTVGFSG 691
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 91.3 bits (225), Expect = 1e-18 Identities = 49/109 (44%), Positives = 62/109 (56%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ ER +NQLLT +DG E G++V+ ATNR DI+D ALLR Sbjct: 566 LDEIDSIAPRRGTTSDSGVTER--IVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLR 623 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GRFD+ + + PD R ILKVH N DV L IA RT G+ G Sbjct: 624 AGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVG 672 Score = 76.3 bits (186), Expect = 4e-14 Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 5/114 (4%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + + + QLLT MDG + +IV+ ATNR D +D AL R Sbjct: 289 IDEIDSIAPKREEVQ---GEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRR 345 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSN-----KKFDADVSLEVIAMRTPGFSG 329 PGRFDR++ + VPD GR EIL +H N + + + LE +A T GF G Sbjct: 346 PGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVG 399
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 90.9 bits (224), Expect = 1e-18 Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 2/153 (1%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + E ++TL +LLT+MDGF+ ++ ATNR D LD ALLR Sbjct: 280 MDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLR 339 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR+V + +P+ GR EI K+H + K + E + GF+G Sbjct: 340 PGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAG 399 Query: 363 XXXGRRGRTGISSKEIDDSIDRI--VAGMEGTV 455 R R I+ ++ ++ ++ V +EGT+ Sbjct: 400 FFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTI 432
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 90.9 bits (224), Expect = 1e-18 Identities = 48/145 (33%), Positives = 76/145 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++T+ +LL ++DGF + I V+AATNRADILD AL+R Sbjct: 275 IDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMR 334 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 GR DR++ P R IL++H + DV+ E +A T F+G Sbjct: 335 SGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAG 394 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVA 437 RR T ++ ++ ++ I ++ A Sbjct: 395 MLALRRDATEVTHEDFNEGIIQVQA 419
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 90.5 bits (223), Expect = 2e-18 Identities = 46/145 (31%), Positives = 77/145 (53%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDAV ++E ++T+ +L+T++DGF+ I V+ ATNR + LD ALLRP Sbjct: 309 DEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRP 368 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXX 365 GR DR+V +PD+ GR I ++H + + + E+I+ P +G Sbjct: 369 GRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGM 428 Query: 366 XXGRRGRTGISSKEIDDSIDRIVAG 440 R R + K+ ++D++++G Sbjct: 429 FAIRARRKVATEKDFLKAVDKVISG 453
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 90.5 bits (223), Expect = 2e-18 Identities = 48/145 (33%), Positives = 76/145 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++T+ +LL ++DGF + I V+AATNRADILD AL+R Sbjct: 269 IDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMR 328 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 GR DR++ P R IL++H + DV+ E +A T F+G Sbjct: 329 SGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAG 388 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVA 437 RR T ++ ++ ++ I ++ A Sbjct: 389 MLALRRDATEVTHEDFNEGIIQVQA 413
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 90.5 bits (223), Expect = 2e-18 Identities = 44/109 (40%), Positives = 66/109 (60%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + + ++QLLT MDG + + ++V+AATNR + +D AL R Sbjct: 313 IDEIDSIAPKRDKTN---GEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRR 369 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GRFDR+V + +PD GR E+L++H N K DV LE +A T G+ G Sbjct: 370 FGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVG 418 Score = 80.5 bits (197), Expect = 2e-15 Identities = 40/109 (36%), Positives = 56/109 (51%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+D++ ++ +NQLLTEMDG + V+ ATNR D +D A+LR Sbjct: 586 LDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILR 645 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 PGR D+ + V +PD R IL + + L IA T GFSG Sbjct: 646 PGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSG 694
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 90.1 bits (222), Expect = 2e-18 Identities = 46/144 (31%), Positives = 74/144 (51%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + E ++T+ +LL ++DGFE I V+ ATNR DILD ALLR Sbjct: 247 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLR 306 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ P+ R +ILK+H ++L IA PG SG Sbjct: 307 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAG 366 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ ++ + ++ +++ Sbjct: 367 MYALRERRVHVTQEDFEMAVAKVM 390
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 90.1 bits (222), Expect = 2e-18 Identities = 46/144 (31%), Positives = 74/144 (51%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + E ++T+ +LL ++DGFE I V+ ATNR DILD ALLR Sbjct: 244 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLR 303 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ P+ R +ILK+H ++L IA PG SG Sbjct: 304 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAG 363 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ ++ + ++ +++ Sbjct: 364 MYALRERRVHVTQEDFEMAVAKVM 387
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 89.7 bits (221), Expect = 3e-18 Identities = 47/109 (43%), Positives = 66/109 (60%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + + ++QLLT MDG + + ++V+AATNR + +D AL R Sbjct: 323 IDEIDSIAPKREKTN---GEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRR 379 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GRFDR+V V +PD GR EIL++H N K DV LE IA T G+ G Sbjct: 380 FGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVG 428 Score = 78.2 bits (191), Expect = 9e-15 Identities = 41/109 (37%), Positives = 58/109 (53%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+D++ ++ +NQLLTEMDG + V+ ATNR D +D AL+R Sbjct: 596 LDELDSIAKARGASAGDSGGG-DRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMR 654 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 PGR D+ + V +PD R IL+ + DV L +A T GFSG Sbjct: 655 PGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSG 703
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 89.7 bits (221), Expect = 3e-18 Identities = 48/145 (33%), Positives = 75/145 (51%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++T+ +LL ++DGF + I V+AATNRADILD AL+R Sbjct: 270 IDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMR 329 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 GR DR++ P R IL++H DV+ E +A T F+G Sbjct: 330 SGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAG 389 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVA 437 RR T ++ ++ ++ I ++ A Sbjct: 390 MLALRRDATEVNHEDFNEGIIQVQA 414
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 89.4 bits (220), Expect = 4e-18 Identities = 47/145 (32%), Positives = 76/145 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + E ++T+ +LL ++DGF+ T + V+AATNR DILD ALLR Sbjct: 250 IDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLR 309 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 GR DR++ +P+ R I+++H DV+ E +A T F+G Sbjct: 310 SGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAG 369 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVA 437 RRG T ++ ++ + I + A Sbjct: 370 IIALRRGATELTHEDYMEGILEVQA 394
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 89.0 bits (219), Expect = 5e-18 Identities = 41/87 (47%), Positives = 60/87 (68%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 248 E+ ++QLLTE+DG E ++V+AATNR D++D ALLRPGR +R + + PD + R EI Sbjct: 574 ERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIF 633 Query: 249 KVHGSNKKFDADVSLEVIAMRTPGFSG 329 K+H K DV++E +A +T G+SG Sbjct: 634 KIHLRGKPLADDVNIEELAEKTEGYSG 660 Score = 88.6 bits (218), Expect = 7e-18 Identities = 47/109 (43%), Positives = 62/109 (56%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + + + QLL MDG E +IV+AATNR D +D AL R Sbjct: 281 IDEIDSIAPKREEVT---GEVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRR 337 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 PGRFDR++ + VPD GR EIL++H DV LE +A T GF G Sbjct: 338 PGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVG 386
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 88.2 bits (217), Expect = 9e-18 Identities = 45/109 (41%), Positives = 65/109 (59%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + ++ ++QLLT MDG + ++V+AATNR + +D AL R Sbjct: 308 IDEIDAIAPKREKAH---GEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRR 364 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GRFDR++ + +PD GR EIL++H N K DV LE +A GF G Sbjct: 365 FGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVG 413 Score = 84.3 bits (207), Expect = 1e-16 Identities = 39/108 (36%), Positives = 58/108 (53%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+D++ ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRP Sbjct: 582 DELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRP 641 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GR D+ + + +PD R +I K AD+ L +A T GFSG Sbjct: 642 GRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSG 689
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 88.2 bits (217), Expect = 9e-18 Identities = 45/108 (41%), Positives = 63/108 (58%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEID++ ND ++ +NQ+LTE+DG I ++AATNR DILD AL RP Sbjct: 1034 DEIDSLAKERNSNTN--NDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRP 1091 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GR D+ + + +PD++ R I K N + DV + +A RT GFSG Sbjct: 1092 GRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSG 1139 Score = 84.7 bits (208), Expect = 1e-16 Identities = 45/109 (41%), Positives = 65/109 (59%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ N+ ++ ++QLLT MDG + N ++V+AATNR + +D AL R Sbjct: 626 IDEIDSIANKRSKSN---NELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRR 682 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GRFDR++ + VPD +GR EIL K D DV+L IA G+ G Sbjct: 683 FGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVG 731
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 88.2 bits (217), Expect = 9e-18 Identities = 44/144 (30%), Positives = 75/144 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + E ++T+ +LL ++DGFE + I ++ ATNR DILD ALLR Sbjct: 247 MDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLR 306 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ P V R EIL++H ++L +A + G SG Sbjct: 307 PGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAG 366 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ ++ + ++ +++ Sbjct: 367 MYALRERRIHVTQEDFELAVGKVM 390
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 87.8 bits (216), Expect = 1e-17 Identities = 48/143 (33%), Positives = 73/143 (51%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++T+ QLL+EMDGF+ I ++AATNR D+LD A+LR Sbjct: 248 IDEIDAIASKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILR 307 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGRFDR + V P+V GR +I ++H V +A T SG Sbjct: 308 PGRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAG 367 Query: 363 XXXGRRGRTGISSKEIDDSIDRI 431 R RT + ++ + +++ Sbjct: 368 MFAIRDDRTEVRMQDFQSAREKL 390
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 87.8 bits (216), Expect = 1e-17 Identities = 43/145 (29%), Positives = 75/145 (51%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + E ++T+ +LL ++DGF + + V+AATNR D+LD ALLR Sbjct: 280 IDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLR 339 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 GR DR++ +P R +IL++H D D++ + +A T F+G Sbjct: 340 SGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAG 399 Query: 363 XXXGRRGRTGISSKEIDDSIDRIVA 437 R G++ + ++ + I + A Sbjct: 400 MIALRNGQSSVKHEDFVEGISEVQA 424
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 87.0 bits (214), Expect = 2e-17 Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 1/145 (0%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXND-EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALL 179 +DEID++ D E ++T+ +LL ++DGFE I V+ ATNR DILD ALL Sbjct: 244 MDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALL 303 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXX 359 RPGR DR++ P R EIL++H + + L+ IA + G SG Sbjct: 304 RPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEA 363 Query: 360 XXXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ ++ + ++ +++ Sbjct: 364 GMFALRERRVHVTQEDFELAVAKVL 388
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 87.0 bits (214), Expect = 2e-17 Identities = 47/144 (32%), Positives = 75/144 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + E ++T+ +LL ++DGFE I V+ ATNR DILDSALLR Sbjct: 243 MDEIDSIGSRLEGGSGG-DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR 301 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ P+ R +ILK+H ++L IA PG SG Sbjct: 302 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAG 361 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ ++ + ++ +++ Sbjct: 362 MYALRERRVHVTQEDFEMAVAKVM 385
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 86.7 bits (213), Expect = 3e-17 Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 4/112 (3%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDA+ + + +NQLL++MDG E I+V+ TNR D++D ALLRP Sbjct: 405 DEIDAICKQRGSMAGSSS-VHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRP 463 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSN----KKFDADVSLEVIAMRTPGFSG 329 GR + Q+ V +PD GR +ILK+H + K D +V LE I+ RT FSG Sbjct: 464 GRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSG 515
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 86.3 bits (212), Expect = 3e-17 Identities = 42/109 (38%), Positives = 65/109 (59%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++TL +LL +MDGF+ + ++ ATNR D LD ALLR Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLR 291 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 PGR DR++ +D+P+ + R +ILK+H ++ E I + GF+G Sbjct: 292 PGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 86.3 bits (212), Expect = 3e-17 Identities = 42/109 (38%), Positives = 65/109 (59%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++TL +LL +MDGF+ + ++ ATNR D LD ALLR Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLR 291 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 PGR DR++ +D+P+ + R +ILK+H ++ E I + GF+G Sbjct: 292 PGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 86.3 bits (212), Expect = 3e-17 Identities = 42/109 (38%), Positives = 65/109 (59%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++TL +LL +MDGF+ + ++ ATNR D LD ALLR Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLR 291 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 PGR DR++ +D+P+ + R +ILK+H ++ E I + GF+G Sbjct: 292 PGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 86.3 bits (212), Expect = 3e-17 Identities = 41/108 (37%), Positives = 60/108 (55%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+D++ ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRP Sbjct: 576 DELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRP 635 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GR D+ + + +PD + R ILK + DV LE +A T GFSG Sbjct: 636 GRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 683 Score = 85.9 bits (211), Expect = 4e-17 Identities = 46/109 (42%), Positives = 64/109 (58%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + + ++QLLT MDG + +IV+AATNR + +D AL R Sbjct: 302 IDELDAIAPKREKTH---GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 358 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GRFDR+V + +PD GR EIL++H N K DV LE +A T G G Sbjct: 359 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVG 407
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 86.3 bits (212), Expect = 3e-17 Identities = 41/108 (37%), Positives = 60/108 (55%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+D++ ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRP Sbjct: 576 DELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRP 635 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GR D+ + + +PD + R ILK + DV LE +A T GFSG Sbjct: 636 GRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 683 Score = 85.9 bits (211), Expect = 4e-17 Identities = 46/109 (42%), Positives = 64/109 (58%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + + ++QLLT MDG + +IV+AATNR + +D AL R Sbjct: 302 IDELDAIAPKREKTH---GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 358 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GRFDR+V + +PD GR EIL++H N K DV LE +A T G G Sbjct: 359 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVG 407
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 86.3 bits (212), Expect = 3e-17 Identities = 41/108 (37%), Positives = 60/108 (55%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+D++ ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRP Sbjct: 576 DELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRP 635 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GR D+ + + +PD + R ILK + DV LE +A T GFSG Sbjct: 636 GRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 683 Score = 85.9 bits (211), Expect = 4e-17 Identities = 46/109 (42%), Positives = 64/109 (58%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + + ++QLLT MDG + +IV+AATNR + +D AL R Sbjct: 302 IDELDAIAPKREKTH---GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 358 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GRFDR+V + +PD GR EIL++H N K DV LE +A T G G Sbjct: 359 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVG 407
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 86.3 bits (212), Expect = 3e-17 Identities = 41/108 (37%), Positives = 60/108 (55%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+D++ ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRP Sbjct: 576 DELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRP 635 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GR D+ + + +PD + R ILK + DV LE +A T GFSG Sbjct: 636 GRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 683 Score = 85.9 bits (211), Expect = 4e-17 Identities = 46/109 (42%), Positives = 64/109 (58%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + + ++QLLT MDG + +IV+AATNR + +D AL R Sbjct: 302 IDELDAIAPKREKTH---GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 358 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GRFDR+V + +PD GR EIL++H N K DV LE +A T G G Sbjct: 359 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVG 407
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 85.9 bits (211), Expect = 4e-17 Identities = 46/109 (42%), Positives = 64/109 (58%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + + ++QLLT MDG + +IV+AATNR + +D AL R Sbjct: 303 IDELDAIAPKREKTH---GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GRFDR+V + +PD GR EIL++H N K DV LE +A T G G Sbjct: 360 FGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVG 408 Score = 82.8 bits (203), Expect = 4e-16 Identities = 39/108 (36%), Positives = 60/108 (55%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+D++ ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRP Sbjct: 577 DELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRP 636 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GR D+ + + +PD + R ILK + DV ++ +A T GFSG Sbjct: 637 GRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSG 684
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 85.9 bits (211), Expect = 4e-17 Identities = 41/108 (37%), Positives = 57/108 (52%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+D++ ++ LNQLLTEMDG + ++ ATNR DI+D ALLRP Sbjct: 581 DELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRP 640 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GR D+ + + +PD R +I K D+ L +A T GFSG Sbjct: 641 GRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSG 688 Score = 80.5 bits (197), Expect = 2e-15 Identities = 43/109 (39%), Positives = 63/109 (57%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + + ++QLLT MDG + +IV+ ATNR + +D AL R Sbjct: 307 IDEIDSIAPKREKTH---GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRR 363 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GRFDR++ + VPD GR E+L +H N K +V LE I+ T G+ G Sbjct: 364 FGRFDREIDIGVPDEVGRLEVLGIHTKNMKLAEEVDLERISKDTHGYVG 412
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 85.9 bits (211), Expect = 4e-17 Identities = 43/109 (39%), Positives = 62/109 (56%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV E ++T+ +LL ++DGF+ + V+ ATNR + LD ALLR Sbjct: 292 IDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLR 351 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 PGR DR++ +PD++ R I ++H S DV+LE M FSG Sbjct: 352 PGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSG 400
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 85.9 bits (211), Expect = 4e-17 Identities = 45/109 (41%), Positives = 64/109 (58%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + + ++QLLT MDG + +IV+ ATNR + +D AL R Sbjct: 307 IDEIDSIAPKREKTH---GEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GRFDR++ + VPD GR E+L++H N K DV LE IA T G+ G Sbjct: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVG 412 Score = 83.2 bits (204), Expect = 3e-16 Identities = 41/108 (37%), Positives = 57/108 (52%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+D++ ++ LNQLLTEMDG + ++ ATNR DI+D ALLRP Sbjct: 581 DELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRP 640 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GR D+ + + +PD R +I K +V L +A T GFSG Sbjct: 641 GRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSG 688
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 85.9 bits (211), Expect = 4e-17 Identities = 45/140 (32%), Positives = 72/140 (51%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + E ++T+ +LL ++DGF + + V+AATNR D LD ALLR Sbjct: 284 IDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLR 343 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 GR DR++ +P+ R IL++H D D++ E +A T ++G Sbjct: 344 SGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAG 403 Query: 363 XXXGRRGRTGISSKEIDDSI 422 R+G T I+ + D I Sbjct: 404 MIALRQGDTKINHEHFMDGI 423
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 85.9 bits (211), Expect = 4e-17 Identities = 41/108 (37%), Positives = 64/108 (59%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++TL +LL ++DGF+ + V+ ATNR D LD ALLR Sbjct: 249 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLR 308 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFS 326 PGR DR++ + +P+ + R EILK+H + ++ E + + GFS Sbjct: 309 PGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFS 356
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 84.7 bits (208), Expect = 1e-16 Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 1/145 (0%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXND-EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALL 179 +DEID++ D E ++T+ +LL ++DGFE I V+ TNR DILD ALL Sbjct: 230 MDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALL 289 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXX 359 RPGR DR++ P GR +ILK+H ++L+ I+ + G SG Sbjct: 290 RPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEA 349 Query: 360 XXXXGRRGRTGISSKEIDDSIDRIV 434 R R +S ++ + ++ +++ Sbjct: 350 GMYALRERRVHVSQEDFEMAVSKVM 374
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 84.3 bits (207), Expect = 1e-16 Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 1/145 (0%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXND-EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALL 179 +DEID++ D E ++T+ +LL ++DGFE I ++ ATNR DILD ALL Sbjct: 255 MDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALL 314 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXX 359 RPGR DR++ P+ R +ILK+H ++L IA G SG Sbjct: 315 RPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEA 374 Query: 360 XXXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ ++++ ++ +++ Sbjct: 375 GMFALRERRVHVTQEDLEMAVAKVM 399
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 84.0 bits (206), Expect = 2e-16 Identities = 42/108 (38%), Positives = 57/108 (52%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+D++ ++ LNQLLTEMDG + ++ ATNR DI+DSALLRP Sbjct: 580 DELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRP 639 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GR D+ + + +PD R I K DV + +A T GFSG Sbjct: 640 GRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSG 687 Score = 84.0 bits (206), Expect = 2e-16 Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 1/110 (0%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTL-NQLLTEMDGFEGNTGIIVVAATNRADILDSALL 179 +DEID++ N E E+ + +QLLT MDG + +IV+ ATNR + +D AL Sbjct: 306 IDEIDSIAPKREKT----NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALR 361 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 R GRFDR++ + VPD GR E+L++H N K DV LE I+ T G+ G Sbjct: 362 RFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVG 411
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 84.0 bits (206), Expect = 2e-16 Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 1/110 (0%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTL-NQLLTEMDGFEGNTGIIVVAATNRADILDSALL 179 +DEID++ N E E+ + +QLLT MDG + +IV+ ATNR + +D AL Sbjct: 306 IDEIDSIAPKREKT----NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALR 361 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 R GRFDR++ + VPD GR E+L++H N K DV LE I+ T G+ G Sbjct: 362 RFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVG 411 Score = 79.3 bits (194), Expect = 4e-15 Identities = 39/87 (44%), Positives = 51/87 (58%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 248 ++ LNQLLTEMDG + ++ ATNR DI+DSALLRPGR D+ + + +PD R I Sbjct: 602 DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIF 661 Query: 249 KVHGSNKKFDADVSLEVIAMRTPGFSG 329 K DV + +A T GFSG Sbjct: 662 KAALRKSPIAKDVDIGALAKYTQGFSG 688
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 83.6 bits (205), Expect = 2e-16 Identities = 43/112 (38%), Positives = 65/112 (58%), Gaps = 4/112 (3%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDA+ + +NQLLT++DG E ++++ TNR D+LD ALLRP Sbjct: 325 DEIDAICKSRGSTRDGTG-VHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRP 383 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKK----FDADVSLEVIAMRTPGFSG 329 GR + QV + +PD GR +IL++H + K D++L+ +A RT +SG Sbjct: 384 GRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYSG 435
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 83.6 bits (205), Expect = 2e-16 Identities = 42/108 (38%), Positives = 57/108 (52%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+D++ ++ LNQLLTEMDG + ++ ATNR DI+D ALLRP Sbjct: 581 DELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRP 640 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GR D+ + + +PD R +I K DV L +A T GFSG Sbjct: 641 GRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSG 688 Score = 83.2 bits (204), Expect = 3e-16 Identities = 43/109 (39%), Positives = 64/109 (58%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + + ++QLLT MDG + +IV+ ATNR + +D AL R Sbjct: 307 IDEIDSIAPKREKTH---GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRR 363 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GRFDR++ + VPD GR E+L++H N K DV LE ++ T G+ G Sbjct: 364 FGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVG 412
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 83.2 bits (204), Expect = 3e-16 Identities = 45/108 (41%), Positives = 62/108 (57%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE D++ D + +NQ+LT+MDG EG G+ V+AAT+R D++DSALLRP Sbjct: 899 DEFDSIAPKRGHDSTGVTD---RVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRP 955 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 GR D+ V D+PD R +IL+ N V+L +A GFSG Sbjct: 956 GRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSG 1003
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 83.2 bits (204), Expect = 3e-16 Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 2/111 (1%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSAL 176 +DEIDA+ + E ++TL +LL +MDGF+ G T II+ ATNR D LD AL Sbjct: 231 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIM--ATNRPDTLDPAL 288 Query: 177 LRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 LRPGR DR++ + +P+ GR EILK+H ++ E + T G +G Sbjct: 289 LRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNG 339
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 82.4 bits (202), Expect = 5e-16 Identities = 45/87 (51%), Positives = 56/87 (64%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 248 E+ L+ LLTEMDG E GI+V+AATNR +D+AL+RPGRFD + V PD+ R EIL Sbjct: 408 ERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEIL 467 Query: 249 KVHGSNKKFDADVSLEVIAMRTPGFSG 329 +VH N DV L IA T F+G Sbjct: 468 QVHTRNMTLGDDVDLRKIAEETDLFTG 494 Score = 62.0 bits (149), Expect = 7e-10 Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 6/131 (4%) Frame = +3 Query: 66 REQTL---NQLLTEMDGFEGNTG---IIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 227 REQ + +QL T MD + ++ ++VVA+TNR D +D AL R GRFD V V P+ Sbjct: 139 REQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNE 198 Query: 228 RGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKE 407 R +IL+++ D V L+ IA+ G+ G +R + Sbjct: 199 EDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLILTS 258 Query: 408 IDDSIDRIVAG 440 D I + V G Sbjct: 259 QDFKIAKSVVG 269
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 81.6 bits (200), Expect = 8e-16 Identities = 41/108 (37%), Positives = 63/108 (58%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + E ++T+ +LL ++DGF+ N + V+AATNR DILD ALLR Sbjct: 269 IDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLR 328 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFS 326 GR DR++ +P+ R I+++H DV+ E +A R P S Sbjct: 329 SGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELA-RCPTIS 375
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 81.6 bits (200), Expect = 8e-16 Identities = 41/144 (28%), Positives = 73/144 (50%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ E ++T+ +LL ++DGF+ + V+ ATN+ + LD AL+R Sbjct: 281 IDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIR 340 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ + PD+ + +IL +H S DV+LE + SG Sbjct: 341 PGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAG 400 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R +++++ + +R++ Sbjct: 401 LLALRERRMQVTAEDFKQAKERVM 424
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 81.6 bits (200), Expect = 8e-16 Identities = 46/144 (31%), Positives = 68/144 (47%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++ L +LL +MDGF+ N + V+ ATNRAD LD ALLR Sbjct: 264 IDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLR 323 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ +PD R + I S +V LE R SG Sbjct: 324 PGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESG 383 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R + +K+ + + ++ Sbjct: 384 MLAVRENRYIVLAKDFEKAYKTVI 407
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 81.6 bits (200), Expect = 8e-16 Identities = 46/144 (31%), Positives = 68/144 (47%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++ L +LL +MDGF+ N + V+ ATNRAD LD ALLR Sbjct: 264 IDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLR 323 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ +PD R + I S +V LE R SG Sbjct: 324 PGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESG 383 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R + +K+ + + ++ Sbjct: 384 MLAVRENRYIVLAKDFEKAYKTVI 407
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 81.6 bits (200), Expect = 8e-16 Identities = 50/111 (45%), Positives = 63/111 (56%), Gaps = 3/111 (2%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDA+ + L LL E+DG E G+++VAATNR D +D+ALLRP Sbjct: 616 DEIDALSPDRDGSSTSAANH---VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRP 672 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKKFDAD---VSLEVIAMRTPGFSG 329 GR DR + V PDV R EILK KKF+ + V L +A RT G+SG Sbjct: 673 GRLDRHIYVGPPDVNARLEILK--KCTKKFNTEESGVDLHELADRTEGYSG 721 Score = 68.2 bits (165), Expect = 1e-11 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 4/113 (3%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEID++ + R + LLT MDG ++V+AATNR + +D AL R Sbjct: 344 IDEIDSIAPNRANDDSGEVESR--VVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRR 401 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADV----SLEVIAMRTPGFSG 329 PGRFD++V + +PDV R +IL S D V +++ IA +T G+ G Sbjct: 402 PGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVG 454
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 81.3 bits (199), Expect = 1e-15 Identities = 46/144 (31%), Positives = 69/144 (47%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++ L +LL +MDGF+ +T + V+ ATNR D LD ALLR Sbjct: 260 IDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLR 319 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ +PD R + + S DV LE R SG Sbjct: 320 PGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAG 379 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R + +K+++ + +V Sbjct: 380 MQAVRENRYVVLTKDLEKAYKNVV 403
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 80.9 bits (198), Expect = 1e-15 Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 1/151 (0%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+R Sbjct: 284 IDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIR 343 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ +PD + + I ++H S DV+L+ + M SG Sbjct: 344 PGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAG 403 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV-AGMEGT 452 R R +++++ S + ++ EGT Sbjct: 404 LMALRERRMKVTNEDFKKSKENVLYKKQEGT 434
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 80.9 bits (198), Expect = 1e-15 Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 1/151 (0%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+R Sbjct: 284 IDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIR 343 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ +PD + + I ++H S DV+L+ + M SG Sbjct: 344 PGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAG 403 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV-AGMEGT 452 R R +++++ S + ++ EGT Sbjct: 404 LMALRERRMKVTNEDFKKSKENVLYKKQEGT 434
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 80.9 bits (198), Expect = 1e-15 Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 1/151 (0%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+R Sbjct: 284 IDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIR 343 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ +PD + + I ++H S DV+L+ + M SG Sbjct: 344 PGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAG 403 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV-AGMEGT 452 R R +++++ S + ++ EGT Sbjct: 404 LMALRERRMKVTNEDFKKSKENVLYKKQEGT 434
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 80.9 bits (198), Expect = 1e-15 Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 4/112 (3%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+DA+ +Q +NQLL +MDG + I+V+ TNR D++D ALLRP Sbjct: 379 DELDAICKKRGSSGGDTG-VGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRP 437 Query: 186 GRFDRQVSVDVPDVRGRTEILKVH----GSNKKFDADVSLEVIAMRTPGFSG 329 GR + + + +PD GR +ILK+H SN + DV +E +A T FSG Sbjct: 438 GRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSG 489
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 80.1 bits (196), Expect = 2e-15 Identities = 43/109 (39%), Positives = 58/109 (53%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++ L +LL +MDGF+ N + V+ ATNRAD LD ALLR Sbjct: 264 IDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLR 323 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 PGR DR++ +PD R + I S +V LE R SG Sbjct: 324 PGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISG 372
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 79.7 bits (195), Expect = 3e-15 Identities = 41/139 (29%), Positives = 69/139 (49%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+R Sbjct: 284 IDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIR 343 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ +PD + + I ++H S DV+L+ + M SG Sbjct: 344 PGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAG 403 Query: 363 XXXGRRGRTGISSKEIDDS 419 R R +++++ S Sbjct: 404 LMALRERRMKVTNEDFKKS 422
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 79.7 bits (195), Expect = 3e-15 Identities = 42/144 (29%), Positives = 70/144 (48%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+R Sbjct: 283 IDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIR 342 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ +PD + + I +H S DV+L + M SG Sbjct: 343 PGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAG 402 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R +++++ S + ++ Sbjct: 403 LMALRERRMKVTNEDFKKSKESVL 426
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 79.3 bits (194), Expect = 4e-15 Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 4/112 (3%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+D+V + +NQLL++MDG + I+V+ TNR D++D+ALLRP Sbjct: 385 DELDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDGVDQLNNILVIGMTNRLDLIDTALLRP 444 Query: 186 GRFDRQVSVDVPDVRGRTEILKVH----GSNKKFDADVSLEVIAMRTPGFSG 329 GRF+ Q+ + +PD +GR +I +H N +DV+ + ++ T F+G Sbjct: 445 GRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLTKNFTG 496
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 79.0 bits (193), Expect = 5e-15 Identities = 42/109 (38%), Positives = 58/109 (53%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++ L +LL +MDGF+ T + V+ ATNRAD LD ALLR Sbjct: 261 IDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLR 320 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 PGR DR++ +PD R + I + +V LE R SG Sbjct: 321 PGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSG 369
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 79.0 bits (193), Expect = 5e-15 Identities = 37/90 (41%), Positives = 56/90 (62%) Frame = +3 Query: 57 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 236 N+++ L+QLL E+DG +G G+++ ATNR ++LD ALLRPGRFD+ V V +P + R Sbjct: 1148 NEKQVSLLSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKR 1207 Query: 237 TEILKVHGSNKKFDADVSLEVIAMRTPGFS 326 EIL+ +G + + RT GF+ Sbjct: 1208 VEILQFYGQTLGYQKTMPWAYFGERTVGFT 1237
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 79.0 bits (193), Expect = 5e-15 Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 4/112 (3%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDA+ + +NQLL+++DG E I+V+ TNR D++D ALLRP Sbjct: 328 DEIDAICKQRGSMAGSTG-VHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRP 386 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKK----FDADVSLEVIAMRTPGFSG 329 GR + ++ + +PD +GR +IL +H + + ADV ++ +A+ T FSG Sbjct: 387 GRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSG 438
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 79.0 bits (193), Expect = 5e-15 Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 4/112 (3%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDA+ + +NQLL+++DG E I+V+ TNR D++D ALLRP Sbjct: 328 DEIDAICKQRGSMAGSTG-VHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRP 386 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKK----FDADVSLEVIAMRTPGFSG 329 GR + ++ + +PD +GR +IL +H + + ADV ++ +A+ T FSG Sbjct: 387 GRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSG 438
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 79.0 bits (193), Expect = 5e-15 Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 4/112 (3%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDA+ + +NQLL+++DG E I+V+ TNR D++D ALLRP Sbjct: 328 DEIDAICKQRGSMAGSTG-VHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRP 386 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSNKK----FDADVSLEVIAMRTPGFSG 329 GR + ++ + +PD +GR +IL +H + + ADV ++ +A+ T FSG Sbjct: 387 GRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSG 438
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 78.6 bits (192), Expect = 7e-15 Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 9/117 (7%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE D++ D + +NQLLT+MDG EG G+ ++AAT+R D++DSALLRP Sbjct: 797 DEFDSIAPKRGHDSTGVTD---RVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRP 853 Query: 186 GRFDRQVSVDVPDVRGRTEILKV-------HGSNKKF--DADVSLEVIAMRTPGFSG 329 GR D+ V ++P R +IL+ KKF + + L++IA +T GFSG Sbjct: 854 GRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSG 910
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 78.6 bits (192), Expect = 7e-15 Identities = 44/137 (32%), Positives = 65/137 (47%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + E ++ L +LL +MDGF+ + V+ ATNRAD LD ALLR Sbjct: 254 IDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLR 313 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ +PD R + + +V S +V LE R S Sbjct: 314 PGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAG 373 Query: 363 XXXGRRGRTGISSKEID 413 R+ R I K+ + Sbjct: 374 MHAVRKNRYVILPKDFE 390
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 78.6 bits (192), Expect = 7e-15 Identities = 46/137 (33%), Positives = 66/137 (48%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++ L +LL +MDGF+ + + V+ ATNR D LD ALLR Sbjct: 249 IDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLR 308 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ +PD R + I +V S +V LE R SG Sbjct: 309 PGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAG 368 Query: 363 XXXGRRGRTGISSKEID 413 R+ R I K+ + Sbjct: 369 MHAIRKNRYVILPKDFE 385
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 77.8 bits (190), Expect = 1e-14 Identities = 47/145 (32%), Positives = 69/145 (47%), Gaps = 1/145 (0%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++ L +LLT+MDGF+ + V+ ATNRAD LD ALLR Sbjct: 233 IDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLR 292 Query: 183 PGRFDRQVSV-DVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXX 359 PGR DR++ D R R + + + +V L+ MR SG Sbjct: 293 PGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDA 352 Query: 360 XXXXGRRGRTGISSKEIDDSIDRIV 434 R+ R I +I+++ R V Sbjct: 353 GLLAVRKSRGVILQSDIEEAYARAV 377
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 77.0 bits (188), Expect = 2e-14 Identities = 43/137 (31%), Positives = 65/137 (47%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + E ++ L +LL +MDGF+ + V+ ATNRAD LD ALLR Sbjct: 259 IDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLR 318 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ +PD R + + +V + +V LE R S Sbjct: 319 PGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAG 378 Query: 363 XXXGRRGRTGISSKEID 413 R+ R I K+ + Sbjct: 379 MHAVRKNRYVILPKDFE 395
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 77.0 bits (188), Expect = 2e-14 Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 3/81 (3%) Frame = +3 Query: 72 QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 251 + +NQLLTEMDG E + ++AATNR DI+D A+LRPGR D+ + V +P R ILK Sbjct: 700 RVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILK 759 Query: 252 V---HGSNKKFDADVSLEVIA 305 +G+ DADV+LE IA Sbjct: 760 TITKNGTKPPLDADVNLEAIA 780 Score = 60.5 bits (145), Expect = 2e-09 Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 3/112 (2%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEG---NTGIIVVAATNRADILDSA 173 +DEIDA+ D + + QLLT MD ++V+ ATNR D LD A Sbjct: 363 IDEIDAITPKREVAS---KDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPA 419 Query: 174 LLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 L R GRFDR++ + +PD R IL+ + +A TPGF G Sbjct: 420 LRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVG 471
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 76.6 bits (187), Expect = 3e-14 Identities = 41/144 (28%), Positives = 69/144 (47%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDAV E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+R Sbjct: 287 IDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIR 346 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ +PD + + I ++H S +V+LE SG Sbjct: 347 PGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAG 406 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ ++ S + ++ Sbjct: 407 LLALRERRMRVTMEDFQKSKENVL 430
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 76.6 bits (187), Expect = 3e-14 Identities = 40/87 (45%), Positives = 55/87 (63%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 248 ++ +NQLLT++DG EG G+ V+AAT+R D++D ALLRPGR D+ V PD R EIL Sbjct: 958 DRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEIL 1017 Query: 249 KVHGSNKKFDADVSLEVIAMRTPGFSG 329 V + DV L+ +A T F+G Sbjct: 1018 NVLSDSLPLADDVDLQHVASVTDSFTG 1044
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 76.6 bits (187), Expect = 3e-14 Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 4/91 (4%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 248 + +NQLL +MDG + I+V+ TNR D++DSALLRPGRF+ QV + +PD +GR +I Sbjct: 369 DNVVNQLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIF 428 Query: 249 KVH----GSNKKFDADVSLEVIAMRTPGFSG 329 + N DV+L +A T FSG Sbjct: 429 DIQTKKMRENNMMSDDVNLAELAALTKNFSG 459
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 76.6 bits (187), Expect = 3e-14 Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 3/134 (2%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DEIDA+ + E ++ L +LL +MDGFE ++ + V+ ATNRAD LD ALLR Sbjct: 265 IDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPALLR 324 Query: 183 PGRFDRQVSVDVPDVRGRTE---ILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXX 353 PGR DR+ ++ P +R R E I S +V L+ + +R SG Sbjct: 325 PGRLDRK--IEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQ 382 Query: 354 XXXXXXGRRGRTGI 395 R+ R I Sbjct: 383 EAGLRAVRKNRYNI 396
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 76.3 bits (186), Expect = 4e-14 Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 3/142 (2%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+D++ + E ++ L +LLT+MDGF+ +T + V+ ATNRAD LD ALLR Sbjct: 271 IDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLR 330 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHG---SNKKFDADVSLEVIAMRTPGFSGXXXXXXXX 353 PGR DR+ ++ P +R R E + G S + L+ + +R SG Sbjct: 331 PGRLDRK--IEFPYLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQ 388 Query: 354 XXXXXXGRRGRTGISSKEIDDS 419 R+ R I +++++ Sbjct: 389 EAGLRAVRKNRYVILQSDLEEA 410
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 76.3 bits (186), Expect = 4e-14 Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 4/112 (3%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDA+ + +NQLL ++DG E I+V+ TNR D++D ALLRP Sbjct: 333 DEIDAICKARGSVAGNSG-VHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRP 391 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSN----KKFDADVSLEVIAMRTPGFSG 329 GR + Q+ + +P+ +GR +IL +H K +DV IA +T FSG Sbjct: 392 GRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSG 443
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 76.3 bits (186), Expect = 4e-14 Identities = 39/144 (27%), Positives = 69/144 (47%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+D++ + E ++ L +LL +MDGF+ + V+ ATNRAD +D ALLR Sbjct: 233 IDEVDSIATKRFDASTSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLR 292 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXX 362 PGR DR++ +PD R + + S + V +E + R S Sbjct: 293 PGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAG 352 Query: 363 XXXGRRGRTGISSKEIDDSIDRIV 434 R R ++ ++ +++ ++V Sbjct: 353 MLAVRASRYMVTQRDFEEAYSKVV 376
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 75.5 bits (184), Expect = 6e-14 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 4/112 (3%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DEIDA+ + +NQLLT++DG + I+V+ TNR D++D ALLRP Sbjct: 328 DEIDAICKQRGSVAGNSG-VHDTVVNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRP 386 Query: 186 GRFDRQVSVDVPDVRGRTEILKVHGSN----KKFDADVSLEVIAMRTPGFSG 329 GR + Q+ + +P+ +GR +IL +H K + DV + IA T FSG Sbjct: 387 GRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSG 438
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 74.7 bits (182), Expect = 1e-13 Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 3/81 (3%) Frame = +3 Query: 72 QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 251 + +NQLLTEMDG E + ++AATNR DI+D A+LRPGR D+ + V +P R ILK Sbjct: 699 RVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILK 758 Query: 252 V---HGSNKKFDADVSLEVIA 305 +G+ D DV+LE IA Sbjct: 759 TITKNGTKPPLDEDVNLETIA 779 Score = 61.6 bits (148), Expect = 9e-10 Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 3/112 (2%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEG---NTGIIVVAATNRADILDSA 173 +DEIDA+ D + + QLLT MD ++V+ ATNR D LD A Sbjct: 362 IDEIDAITPKREVAS---KDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPA 418 Query: 174 LLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 L R GRFDR+V + +PD R IL+ + + +A TPGF G Sbjct: 419 LRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVG 470
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 74.3 bits (181), Expect = 1e-13 Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 2/86 (2%) Frame = +3 Query: 78 LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 257 ++ LL MDG +G ++V+ ATNR D LD AL RPGRFDR++ +PD+ R +IL +H Sbjct: 517 VSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDIH 576 Query: 258 GSNKKFDADV--SLEVIAMRTPGFSG 329 S + + + +L+ IA RT G+ G Sbjct: 577 TSKWEENKPIPETLDAIAERTSGYCG 602
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 71.2 bits (173), Expect = 1e-12 Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 1/110 (0%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE-GNTGIIVVAATNRADILDSALL 179 +DEIDA+ E ++T+ +LL ++DGF+ I V+ ATNR LD AL+ Sbjct: 290 IDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALI 349 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 RPGR DR++ + PD + +I +H S DV+LE + SG Sbjct: 350 RPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSG 399
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 71.2 bits (173), Expect = 1e-12 Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 4/112 (3%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF--EGNTG--IIVVAATNRADILDSA 173 DEIDA+ + R + QLLT MD E G +I++ ATNR D LD+A Sbjct: 305 DEIDAITPKRDGGAQREMERR--IVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAA 362 Query: 174 LLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 L R GRFDR++ ++VP+ R ILK N K D + +A TPGF G Sbjct: 363 LRRAGRFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVG 414 Score = 69.3 bits (168), Expect = 4e-12 Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 4/112 (3%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+DA+ ++ + +N LLTE+DG GI V+ ATNR D++D A+LRP Sbjct: 633 DELDALVPRRDTSL---SESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRP 689 Query: 186 GRFDRQVSVDVPDVRGRTEILKV----HGSNKKFDADVSLEVIAMRTPGFSG 329 GR D+ + +++P+ + +I+K HG+ D D + + FSG Sbjct: 690 GRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSG 741
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 68.9 bits (167), Expect = 6e-12 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 3/86 (3%) Frame = +3 Query: 69 EQTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 242 ++ ++QLL E+DG G G+ VV ATNR D+LD ALLRPGRFD+ + + + D + + Sbjct: 838 DRIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTHEKQQ 897 Query: 243 -ILKVHGSNKKFDADVSLEVIAMRTP 317 I++ + ADVSLE I+ R P Sbjct: 898 TIMEALTRKFRLAADVSLEAISKRCP 923
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 67.8 bits (164), Expect = 1e-11 Identities = 46/123 (37%), Positives = 62/123 (50%), Gaps = 14/123 (11%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEGNTG-----------IIVVA 140 +DEIDA+ N +RE + + QLLT MDG GN G ++V+ Sbjct: 332 IDEIDAIGSKRE------NQQREMEKRIVTQLLTCMDG-PGNKGDKNAPDSSAGFVLVIG 384 Query: 141 ATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPG 320 ATNR D LD AL R GRF+ ++++ PD R EIL V + + + IA TPG Sbjct: 385 ATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPG 444 Query: 321 FSG 329 F G Sbjct: 445 FVG 447 Score = 67.0 bits (162), Expect = 2e-11 Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 1/88 (1%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 248 E+ LNQ L E+DG E + V+ ATNR D++D A LRPGRF + V +P+ R IL Sbjct: 646 ERLLNQFLVELDGGE-RRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASIL 704 Query: 249 KVHGSNKKFDADVSLEVIAMRT-PGFSG 329 K K D V L+ IA GFSG Sbjct: 705 KAIARKKPIDPSVDLDGIAKNNCEGFSG 732
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 67.0 bits (162), Expect = 2e-11 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 1/85 (1%) Frame = +3 Query: 78 LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 257 ++ LL MDG + I+V+ ATNR D +D AL RPGRFDR+ +PD R EILK+H Sbjct: 207 VSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEILKIH 266 Query: 258 GSN-KKFDADVSLEVIAMRTPGFSG 329 + D+ LE +A G+ G Sbjct: 267 TRDWNPKPVDMFLEELAEHCVGYCG 291
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 66.6 bits (161), Expect = 3e-11 Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Frame = +3 Query: 78 LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 257 ++ LL MDG + I+V+ ATNR D +D AL RPGRFDR+ +PD R EILK+H Sbjct: 383 VSTLLALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRFDREFLFSLPDKEARKEILKIH 442 Query: 258 GSN-KKFDADVSLEVIAMRTPGFSG 329 + D LE +A G+ G Sbjct: 443 TRDWNPKPLDTFLEELAENCVGYRG 467
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 66.2 bits (160), Expect = 4e-11 Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Frame = +3 Query: 78 LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 257 ++ LL MDG + I+V+ ATNR D +D AL RPGRFDR+ +PD R EILK+H Sbjct: 552 VSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIH 611 Query: 258 GSN-KKFDADVSLEVIAMRTPGFSG 329 + D LE +A G+ G Sbjct: 612 TRDWNPKPLDTFLEELAENCVGYCG 636
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 65.5 bits (158), Expect = 6e-11 Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 9/110 (8%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+D++ +D + QLL+E+DG EG +IV+ A+NR D++D A+LRP Sbjct: 371 DEMDSIFRTRGTGVS--SDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRP 428 Query: 186 GRFDRQVSVDVPDVRGR--------TEILKVHGSN-KKFDADVSLEVIAM 308 GR D ++ ++ PD TE L VH + +FD D S + AM Sbjct: 429 GRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHADDLAEFDGDRSACIKAM 478
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 65.5 bits (158), Expect = 6e-11 Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 9/110 (8%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+D++ +D + QLL+E+DG EG +IV+ A+NR D++D A+LRP Sbjct: 371 DEMDSIFRTRGTGVS--SDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRP 428 Query: 186 GRFDRQVSVDVPDVRGR--------TEILKVHGSN-KKFDADVSLEVIAM 308 GR D ++ ++ PD TE L VH + +FD D S + AM Sbjct: 429 GRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHADDLAEFDGDRSACIKAM 478
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 64.3 bits (155), Expect = 1e-10 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%) Frame = +3 Query: 69 EQTLNQLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR-TE 242 ++ ++QLL E+DG G G+ V+ ATNR D+LD ALLRPGRFD+ + + + D + Sbjct: 842 DRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQAN 901 Query: 243 ILKVHGSNKKFDADVSLEVIAMRTP 317 IL+ D DVSL+ +A P Sbjct: 902 ILRALTRKFTLDPDVSLDDLAASCP 926
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 64.3 bits (155), Expect = 1e-10 Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 3/87 (3%) Frame = +3 Query: 78 LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 257 ++ LL MDG + +IV+ ATNR D +D AL RPGRFDR+ +PDV+ R +IL++ Sbjct: 539 VSTLLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQI- 597 Query: 258 GSNKKFDADVS---LEVIAMRTPGFSG 329 +K+ + +S ++ +A T G+ G Sbjct: 598 -QTRKWSSPLSTNFIDKLAFLTKGYGG 623
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 63.9 bits (154), Expect = 2e-10 Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 5/88 (5%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNT----GIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV-RG 233 ++ ++QLL E+DG G G+ V+ ATNR D+LD+ALLRPGRFD+ + + V D R Sbjct: 1149 DRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRK 1208 Query: 234 RTEILKVHGSNKKFDADVSLEVIAMRTP 317 + IL+ DVSL+ +A + P Sbjct: 1209 QATILEALTRKFALHPDVSLDRVAEQLP 1236
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 63.5 bits (153), Expect = 2e-10 Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 9/110 (8%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 185 DE+D++ +D + QLL+E+DG EG +IV+ A+NR D++D A+LRP Sbjct: 371 DEMDSIFRTRGTGVS--SDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRP 428 Query: 186 GRFDRQVSVDVPDVRGR--------TEILKVHGSN-KKFDADVSLEVIAM 308 GR D ++ ++ PD TE L VH + +FD D + + AM Sbjct: 429 GRLDVKIKIERPDAEAAQDIYSKYLTESLPVHADDLTEFDGDRAACIKAM 478
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 63.2 bits (152), Expect = 3e-10 Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%) Frame = +3 Query: 69 EQTLNQLLTEMDGF---EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 239 ++ ++QLL E+DG EG G+ VV ATNR D+LD ALLRPGRFD+ + + + D + Sbjct: 932 DRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQ 991 Query: 240 EILKVHGSNKKFDADVSLEV 299 + + +KF D S+++ Sbjct: 992 AKI-IQALTRKFQLDPSVDL 1010 Score = 31.6 bits (70), Expect = 0.99 Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 8/98 (8%) Frame = +3 Query: 57 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 236 N +++ +++ L E+ + G I + +TN AD + + +FD +S++VP R Sbjct: 644 NQQQKDSMSLRLAELIDEYTSKGAIFIGSTNDADAISELIRSKFKFD--ISINVPTEPER 701 Query: 237 ----TEILKVHGSNKK----FDADVSLEVIAMRTPGFS 326 T++L + K DVSL+ +A+++ G + Sbjct: 702 KLILTDLLDDMKTKDKTPVVLRPDVSLDTLALQSAGLT 739
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 62.8 bits (151), Expect = 4e-10 Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 248 + L Q L MDG++ +I++ ATNR + LD A++RPGRFDRQ+ P R +IL Sbjct: 483 DTVLMQFLIYMDGYKKRNDLIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERKDIL 542 Query: 249 KVHGSN-KKFDADVSLEVIAMRTPGFSG 329 ++ N K D + ++A R+ G +G Sbjct: 543 RIFLRNTKALVDDTTKTMMAERSIGLNG 570
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 62.8 bits (151), Expect = 4e-10 Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 3/123 (2%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGN-TGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR-TE 242 ++ ++QLL E+DG + G+ ++ ATNR D+LD ALLRPGRFD+ + + + D R + Sbjct: 837 DRIVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTREKQAN 896 Query: 243 ILKVHGSNKKFDADVSLEVIAMRTP-GFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDS 419 I++ K +D++ + + P ++G R SKEID+ Sbjct: 897 IMRALTRKFKVSSDINFDELVSDFPFSYTGADFYALCSDAMLKAMTR-----ISKEIDEK 951 Query: 420 IDR 428 +D+ Sbjct: 952 VDK 954
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 62.8 bits (151), Expect = 4e-10 Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 10/146 (6%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVVAATNR 152 +DEID++ +DE E + ++LL +MDG G + ++V+AATN Sbjct: 304 IDEIDSICSRRGT-----SDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNF 358 Query: 153 ADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGX 332 +D AL R R ++++ + +P +GR E+LK+ + D D+ LE IA +T G+SG Sbjct: 359 PWDIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDIHLEDIAEKTEGYSGA 416 Query: 333 XXXXXXXXXXXXXGRRGRTGISSKEI 410 RR G+S +EI Sbjct: 417 DITNICRDASLMAMRRRINGLSPEEI 442
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 62.8 bits (151), Expect = 4e-10 Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 10/146 (6%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVVAATNR 152 +DEID++ +DE E + ++LL +MDG G + ++V+AATN Sbjct: 304 IDEIDSICSRRGT-----SDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNF 358 Query: 153 ADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGX 332 +D AL R R ++++ + +P +GR E+LK+ + D DV LE IA +T G+SG Sbjct: 359 PWDIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDVHLEDIADKTEGYSGA 416 Query: 333 XXXXXXXXXXXXXGRRGRTGISSKEI 410 RR G+S +EI Sbjct: 417 DITNICRDASLMAMRRRINGLSPEEI 442
>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)| Length = 69 Score = 62.0 bits (149), Expect = 7e-10 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 4/69 (5%) Frame = +3 Query: 126 IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIA 305 ++V+A TNR D+LD AL+RPGRF RQ+ P ++GR+ I KVH K D ++ + +A Sbjct: 1 VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDTLA 60 Query: 306 MR----TPG 320 + TPG Sbjct: 61 RKLAVLTPG 69
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 61.6 bits (148), Expect = 9e-10 Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 10/146 (6%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVVAATNR 152 +DEID++ +DE E + ++LL +MDG G + ++V+AATN Sbjct: 306 IDEIDSICSRRGT-----SDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNF 360 Query: 153 ADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGX 332 +D AL R R ++++ + +P +GR E+LK++ + D D+ LE IA + G+SG Sbjct: 361 PWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGA 418 Query: 333 XXXXXXXXXXXXXGRRGRTGISSKEI 410 RR G+S +EI Sbjct: 419 DITNVCRDASLMAMRRRINGLSPEEI 444
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 61.2 bits (147), Expect = 1e-09 Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 6/89 (6%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNTG----IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 236 ++ ++QLL E+DG G G + V+ ATNR D+LD ALLRPGRFD+ + + V D + Sbjct: 1110 DRIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDK 1169 Query: 237 TEILKVHGSNKKF--DADVSLEVIAMRTP 317 ++ + +KF VSL +A R P Sbjct: 1170 -QVTIMEALTRKFTLHPTVSLRSVAERLP 1197
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 60.5 bits (145), Expect = 2e-09 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 5/88 (5%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNT----GIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 236 ++ ++QLL E+DG G G+ V+ ATNR D+LD ALLRPGRFD+ + + V D + Sbjct: 1113 DRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDK 1172 Query: 237 -TEILKVHGSNKKFDADVSLEVIAMRTP 317 +IL+ VSL +A + P Sbjct: 1173 QLKILEALTRKFTLHPSVSLHSVAQQLP 1200
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 60.5 bits (145), Expect = 2e-09 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR-GRTEI 245 ++ ++QLL E+DG + V+ ATNR D+LD ALLRPGRFD+ V V + R + + Sbjct: 821 DRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRV 880 Query: 246 LKVHGSNKKFDADVSL 293 L K +A VSL Sbjct: 881 LSAITRKFKLEASVSL 896
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 60.5 bits (145), Expect = 2e-09 Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 4/87 (4%) Frame = +3 Query: 69 EQTLNQLLTEMDGF---EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR- 236 ++ ++QLL E+DG +G G+ VV ATNR D+LD ALLRPGRFD+ + + V D + Sbjct: 938 DRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQ 997 Query: 237 TEILKVHGSNKKFDADVSLEVIAMRTP 317 ++I++ V L+ +A P Sbjct: 998 SKIMEALSRKFHLHPSVDLDKVAESCP 1024
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 60.5 bits (145), Expect = 2e-09 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR-GRTEI 245 ++ ++QLL E+DG + V+ ATNR D+LD ALLRPGRFD+ V V + R + + Sbjct: 824 DRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRV 883 Query: 246 LKVHGSNKKFDADVSL 293 L K +A VSL Sbjct: 884 LSAITRKFKLEASVSL 899
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 60.1 bits (144), Expect = 3e-09 Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 2/106 (1%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNT-GIIVVAATNRADILDSALLR 182 DEID+V ++ ++QLL E+DG + G+ V+ ATNR D+LD ALLR Sbjct: 831 DEIDSVAPKRGNQGDSGG-VMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALLR 889 Query: 183 PGRFDRQVSVDVPDV-RGRTEILKVHGSNKKFDADVSLEVIAMRTP 317 PGRFD+ + + +PD + IL+ D DV L +A P Sbjct: 890 PGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCP 935
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 60.1 bits (144), Expect = 3e-09 Identities = 31/109 (28%), Positives = 57/109 (52%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + + +N LLTE+DG + N G++ +AATN +LD A+ Sbjct: 219 IDELDAIGLSREYQSL--RGDVSEVVNALLTELDGIKENEGVVTIAATNNPAMLDPAI-- 274 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 RF+ ++ +P+ R +I++++ +L+ +T GFSG Sbjct: 275 RSRFEEEIEFKLPNDEERLKIMELYAKKMPLPVKANLKEFVEKTKGFSG 323
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 60.1 bits (144), Expect = 3e-09 Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 2/85 (2%) Frame = +3 Query: 69 EQTLNQLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV-RGRTE 242 ++ ++QLL E+DG G G+ V+ ATNR D+LD ALLRPGRFD+ + + + D + + Sbjct: 821 DRIVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQAN 880 Query: 243 ILKVHGSNKKFDADVSLEVIAMRTP 317 I+K ++ + + IA + P Sbjct: 881 IIKALTRKFTLESGIDILDIAKKCP 905
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 59.7 bits (143), Expect = 3e-09 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 6/87 (6%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNT-----GIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV-R 230 ++ ++QLL E+DG G G+ VV ATNR D+LD ALLRPGRFD+ + + + D Sbjct: 958 DRIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDE 1017 Query: 231 GRTEILKVHGSNKKFDADVSLEVIAMR 311 +++IL+ K +V L IA R Sbjct: 1018 KQSKILEALTRKFKLADNVDLYEIAKR 1044
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 59.3 bits (142), Expect = 4e-09 Identities = 29/78 (37%), Positives = 48/78 (61%) Frame = +3 Query: 69 EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 248 ++ ++QLL E+DG + V+ ATNR D+LD ALLRPGRFD+ V V + R +++ Sbjct: 823 DRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRA-SQLR 881 Query: 249 KVHGSNKKFDADVSLEVI 302 + +KF + S+ ++ Sbjct: 882 VLSAITRKFKLEPSVSLV 899
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 57.8 bits (138), Expect = 1e-08 Identities = 32/109 (29%), Positives = 55/109 (50%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + + +N LLTEMDG N G++ + ATN ++LD+A+ Sbjct: 222 IDEMDAIGLDRRFQSL--RGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDNAI-- 277 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 RF+ ++ +P R +L+ + D D S++ + T G SG Sbjct: 278 RSRFEEEIEFKLPGDDERRMMLEKYIETMPLDVDFSVDKLVKLTKGMSG 326
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 57.4 bits (137), Expect = 2e-08 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 4/112 (3%) Frame = +3 Query: 6 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF--EGNTGIIVVAATNRADILDSALL 179 DE+D++ N ++ ++QLL E+D + N + V+ ATNR D+LD +LL Sbjct: 754 DELDSIAPHRGNSSDSGN-VMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLL 812 Query: 180 RPGRFDRQVSVDV-PDVRGRTEILKVHGSNKKFDADVSLEVIAMRT-PGFSG 329 RPGRFD+ V + + + +L+ K D + L IA P F+G Sbjct: 813 RPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTG 864
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 55.5 bits (132), Expect = 6e-08 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 7/143 (4%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG-------IIVVAATNRADI 161 +DEID++ R + +LL +MDG G + ++V+AATN Sbjct: 304 IDEIDSICSRRGTSEEHEASRRVKA--ELLVQMDGVGGASENEDPSKMVMVLAATNFPWD 361 Query: 162 LDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXX 341 +D AL R R ++++ + +P +GR E+L+++ + DV++E IA G+SG Sbjct: 362 IDEALRR--RLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADIT 419 Query: 342 XXXXXXXXXXGRRGRTGISSKEI 410 RR G++ +EI Sbjct: 420 NVCRDASLMAMRRRIEGLTPEEI 442
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 53.9 bits (128), Expect = 2e-07 Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 2/84 (2%) Frame = +3 Query: 84 QLLTEMDGFEG--NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 257 Q ++ DG + N +I++ ATNR LDSA+LR R + ++ P+VR R +ILK+ Sbjct: 219 QFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPNVRQRKDILKLI 276 Query: 258 GSNKKFDADVSLEVIAMRTPGFSG 329 N+ ++ V L IA +T GFSG Sbjct: 277 LENENVESAVELSEIAKQTDGFSG 300
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 53.5 bits (127), Expect = 2e-07 Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 7/143 (4%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG-------IIVVAATNRADI 161 +DEID++ R ++ +LL +MDG G + ++V+AATN Sbjct: 332 IDEIDSICSKRGTGSEHEASRRVKS--ELLIQMDGVSGPSAGEESSKMVMVLAATNFPWD 389 Query: 162 LDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXX 341 +D AL R R ++++ + +P++ GR ++L+++ D+ L+ IA + G+SG Sbjct: 390 IDEALRR--RLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADIT 447 Query: 342 XXXXXXXXXXGRRGRTGISSKEI 410 RR G+ +EI Sbjct: 448 NVCRDASMMAMRRRIQGLRPEEI 470
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 52.8 bits (125), Expect = 4e-07 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 7/143 (4%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG-------IIVVAATNRADI 161 +DEID++ R + +LL +MDG G + ++V+AATN Sbjct: 307 IDEIDSICSRRGTSEEHEASRRVKA--ELLVQMDGVGGTSENDDPSKMVMVLAATNFPWD 364 Query: 162 LDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXX 341 +D AL R R ++++ + +P +GR E+L++ + DV L IA G+SG Sbjct: 365 IDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADIT 422 Query: 342 XXXXXXXXXXGRRGRTGISSKEI 410 RR G++ +EI Sbjct: 423 NVCRDASLMAMRRRIEGLTPEEI 445
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 52.4 bits (124), Expect = 5e-07 Identities = 30/109 (27%), Positives = 52/109 (47%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 182 +DE+DA+ + + +N LLTEMDG N G++ + ATN ++LD A+ Sbjct: 222 IDEMDAIGLDRRYQSL--RGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDKAI-- 277 Query: 183 PGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 RF+ ++ +PD R +L+ + D ++ + T SG Sbjct: 278 RSRFEEEIEFKLPDDEERKLMLEKYIETMPLKVDFPVDKLVKLTREMSG 326
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 52.4 bits (124), Expect = 5e-07 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 7/143 (4%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG-------IIVVAATNRADI 161 +DEID++ R + +LL +MDG G + ++V+AATN Sbjct: 307 IDEIDSICSRRGTSEEHEASRRVKA--ELLVQMDGVGGASENDDPSKMVMVLAATNFPWD 364 Query: 162 LDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXX 341 +D AL R R ++++ + +P +GR E+L++ + DV+L IA G+SG Sbjct: 365 IDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADIT 422 Query: 342 XXXXXXXXXXGRRGRTGISSKEI 410 RR G++ +EI Sbjct: 423 NVCRDASLMAMRRRIEGLTPEEI 445
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 52.4 bits (124), Expect = 5e-07 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 7/143 (4%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG-------IIVVAATNRADI 161 +DEID++ R + +LL +MDG G + ++V+AATN Sbjct: 307 IDEIDSICSRRGTSEEHEASRRMKA--ELLVQMDGVGGASENDDPSKMVMVLAATNFPWD 364 Query: 162 LDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXX 341 +D AL R R ++++ + +P +GR E+L++ + DV+L IA G+SG Sbjct: 365 IDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADIT 422 Query: 342 XXXXXXXXXXGRRGRTGISSKEI 410 RR G++ +EI Sbjct: 423 NVCRDASLMAMRRRIEGLTPEEI 445
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 49.3 bits (116), Expect = 5e-06 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 2/108 (1%) Frame = +3 Query: 12 IDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPG 188 ID V ++ + + L +M G N G +V+ ATN +LDSA+ R Sbjct: 226 IDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR-- 283 Query: 189 RFDRQVSVDVPDVRGRTEILKVH-GSNKKFDADVSLEVIAMRTPGFSG 329 RF++++ + +P+ R ++ ++H GS D ++ +A +T G+SG Sbjct: 284 RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSG 331
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 49.3 bits (116), Expect = 5e-06 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 2/108 (1%) Frame = +3 Query: 12 IDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPG 188 ID V ++ + + L +M G N G +V+ ATN +LDSA+ R Sbjct: 226 IDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR-- 283 Query: 189 RFDRQVSVDVPDVRGRTEILKVH-GSNKKFDADVSLEVIAMRTPGFSG 329 RF++++ + +P+ R ++ ++H GS D ++ +A +T G+SG Sbjct: 284 RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSG 331
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 49.3 bits (116), Expect = 5e-06 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Frame = +3 Query: 84 QLLTEMDGFEGNTG-IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHG 260 Q +T DGF + IIV+ ATNR +D+A+LR R + V VP+ + R++IL V Sbjct: 206 QFMTLWDGFSSSGDQIIVMGATNRPRDVDAAILR--RMTARFQVPVPNAKQRSQILNVIL 263 Query: 261 SNKKFDADVSLEVIAMRTPGFSG 329 N+K + V+L IA G SG Sbjct: 264 RNEKINNTVNLGEIAQAAEGLSG 286
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 48.9 bits (115), Expect = 6e-06 Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 2/111 (1%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE-GNTGIIVVAATNRADILDSALL 179 +DEID++ ++ + + L +M G N GI+V+ ATN +LDSA+ Sbjct: 233 IDEIDSLCGSRSENE---SEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIR 289 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVH-GSNKKFDADVSLEVIAMRTPGFSG 329 R RF++++ + +P+ R + ++H GS + + + + +T G+SG Sbjct: 290 R--RFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSG 338
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 48.5 bits (114), Expect = 8e-06 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 8/144 (5%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG--------IIVVAATNRAD 158 +DEID++ + R ++ +LL ++DG ++V+AATN Sbjct: 337 IDEIDSLCNSRGGSGEHESSRRVKS--ELLVQVDGVSNTATNEDGSRKIVMVLAATNFPW 394 Query: 159 ILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXX 338 +D AL R R ++++ + +PD R ++ ++ + +DV++E +A RT G+SG Sbjct: 395 DIDEALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDL 452 Query: 339 XXXXXXXXXXXGRRGRTGISSKEI 410 RR G + EI Sbjct: 453 TNVCRDASMNGMRRKIAGKTRDEI 476
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 47.8 bits (112), Expect = 1e-05 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 2/111 (1%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLN-QLLTEMDGFEGNTGIIVVAATNRADILDSALL 179 +DEID+ + E TL + +T DG N ++++ ATNR + +D A L Sbjct: 191 IDEIDSFLRERSST----DHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFL 246 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDAD-VSLEVIAMRTPGFSG 329 R R ++ V +P R +IL V + K D D L++IA T GFSG Sbjct: 247 R--RLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSG 295
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 47.4 bits (111), Expect = 2e-05 Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 2/111 (1%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE-GNTGIIVVAATNRADILDSALL 179 +DEID++ ++ + + L +M G N GI+V+ ATN +LDSA+ Sbjct: 233 IDEIDSLCGSRSENE---SEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIR 289 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVH-GSNKKFDADVSLEVIAMRTPGFSG 329 R RF++++ + +P+ R + K+H G+ + + + +T G+SG Sbjct: 290 R--RFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSG 338
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 47.0 bits (110), Expect = 2e-05 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%) Frame = +3 Query: 84 QLLTEMDGFEGNTG--IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 257 Q ++ DG + + +IV+ ATNR LDSA++R R + ++ P ++ R ILK+ Sbjct: 215 QFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLI 272 Query: 258 GSNKKFDADVSLEVIAMRTPGFSG 329 N+ D V L +A T GFSG Sbjct: 273 LKNENVDRHVDLLEVAQETDGFSG 296
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 47.0 bits (110), Expect = 2e-05 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%) Frame = +3 Query: 84 QLLTEMDGFEGNTG--IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 257 Q ++ DG + + +IV+ ATNR LDSA++R R + ++ P ++ R ILK+ Sbjct: 215 QFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLI 272 Query: 258 GSNKKFDADVSLEVIAMRTPGFSG 329 N+ D V L +A T GFSG Sbjct: 273 LKNENVDRHVDLLEVAQETDGFSG 296
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 47.0 bits (110), Expect = 2e-05 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%) Frame = +3 Query: 84 QLLTEMDGFEGNTG--IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 257 Q ++ DG + + +IV+ ATNR LDSA++R R + ++ P ++ R ILK+ Sbjct: 215 QFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLI 272 Query: 258 GSNKKFDADVSLEVIAMRTPGFSG 329 N+ D V L +A T GFSG Sbjct: 273 LKNENVDRHVDLLEVAQETDGFSG 296
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 46.6 bits (109), Expect = 3e-05 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 3/112 (2%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEG---NTGIIVVAATNRADILDSA 173 +DEID + R ++ + L +MDG + + + V+AATN LD A Sbjct: 291 IDEIDTLGGQRGNSGEHEASRRVKS--EFLVQMDGSQNKFDSRRVFVLAATNIPWELDEA 348 Query: 174 LLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 329 L R RF++++ + +PD+ R ++++ +++ + +A RT GFSG Sbjct: 349 LRR--RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSG 398
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 44.3 bits (103), Expect = 1e-04 Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 2/111 (1%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNT-GIIVVAATNRADILDSALL 179 +DE+DA+ ++ + +LL +M+G ++ G++V+ ATN LDSA+ Sbjct: 231 IDEVDALTGTRGEGE---SEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIR 287 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVH-GSNKKFDADVSLEVIAMRTPGFSG 329 R RF+R++ + +PD+ RT + +++ G + T G+SG Sbjct: 288 R--RFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSG 336
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 43.5 bits (101), Expect = 3e-04 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 10/101 (9%) Frame = +3 Query: 57 NDEREQ--TLNQLLTEMDGF--EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 224 ND R T N++L + E + VVA N D+L ++R GRFD +D+P+ Sbjct: 334 NDSRGDSGTSNRVLATFISWLSEKTKPVFVVATANNVDLLPLEIIRKGRFDEIFFLDLPE 393 Query: 225 VRGRTEILKVH------GSNKKFDADVSLEVIAMRTPGFSG 329 + R EI K+H S K FD + +A + FSG Sbjct: 394 LEERKEIFKIHIQEFRPNSWKLFD----YKKLAQLSESFSG 430
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 43.1 bits (100), Expect = 3e-04 Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 2/84 (2%) Frame = +3 Query: 84 QLLTEMDGFEG--NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 257 Q ++ DG + N+ ++V+ ATNR +D+A+LR R V +P+ R EIL++ Sbjct: 218 QFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLI 275 Query: 258 GSNKKFDADVSLEVIAMRTPGFSG 329 S + ++L+ IA ++ G+SG Sbjct: 276 LSGENLSNAINLKEIASQSEGYSG 299
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 42.7 bits (99), Expect = 4e-04 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 2/110 (1%) Frame = +3 Query: 111 EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH--GSNKKFDAD 284 E + + VVA N D L LLR GRFD + +PD++ R I KVH K + Sbjct: 372 EKKSPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLKKIRPKSWST 431 Query: 285 VSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIV 434 E+++ ++ FSG R ++ +I +S+ R+V Sbjct: 432 YDTEILSAQSNRFSGAEIEESIYEAMHIAFNENRE-FTTSDILNSLKRVV 480
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 42.4 bits (98), Expect = 6e-04 Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 2/141 (1%) Frame = +3 Query: 3 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALL 179 +DEID++ ++ + + L +M+G + +G++V+ ATN LDSA+ Sbjct: 227 IDEIDSLCGSRSEGE---SESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIR 283 Query: 180 RPGRFDRQVSVDVPDVRGRTEILKVH-GSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXX 356 R RF++++ + +P+ R + +++ G + +A T G+SG Sbjct: 284 R--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRD 341 Query: 357 XXXXXGRRGRTGISSKEIDDS 419 RR T KE+ D+ Sbjct: 342 AIMEPVRRIHTATHFKEVYDN 362
>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)| Length = 419 Score = 37.7 bits (86), Expect = 0.014 Identities = 19/41 (46%), Positives = 22/41 (53%) Frame = +3 Query: 75 TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 197 T + LL +DG IV TN D LD AL+RPGR D Sbjct: 308 TFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVD 348
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 419 Score = 37.4 bits (85), Expect = 0.018 Identities = 19/41 (46%), Positives = 22/41 (53%) Frame = +3 Query: 75 TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 197 T + LL +DG IV TN D LD AL+RPGR D Sbjct: 308 TFSGLLNALDGVASTEARIVFMTTNHIDRLDPALIRPGRVD 348
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1| Length = 456 Score = 37.0 bits (84), Expect = 0.024 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = +3 Query: 75 TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 212 T + LL +DG + I TN + LD+A++RPGR D +V V Sbjct: 341 TFSGLLNALDGVTSSEETITFMTTNHPEKLDAAIMRPGRIDYKVFV 386
>YCX9_CHLRE (Q32065) Hypothetical 341.7 kDa protein in psbD-psbC intergenic| region (ORF2971) (ORFB) Length = 2971 Score = 37.0 bits (84), Expect = 0.024 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +3 Query: 78 LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQV 206 + LL +D N G +V A T+ +LD AL RPGR D + Sbjct: 2296 ITDLLVIIDSVRSNKGFVVFATTDIPHVLDPALRRPGRLDETI 2338
>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 418 Score = 36.6 bits (83), Expect = 0.031 Identities = 19/41 (46%), Positives = 22/41 (53%) Frame = +3 Query: 75 TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 197 T + LL +DG IV TN D LD AL+RPGR D Sbjct: 308 TFSGLLNALDGVASTEARIVFMTTNYIDRLDPALIRPGRVD 348
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 36.6 bits (83), Expect = 0.031 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = +3 Query: 111 EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 257 E T + VVA N L S +LR GRFD +D+P+ R I ++H Sbjct: 356 EKTTPVFVVATANTIQNLPSEMLRKGRFDEIFFLDLPNNEERELIFQIH 404
>YCF2_ANTFO (Q859W7) Protein ycf2| Length = 2392 Score = 35.8 bits (81), Expect = 0.053 Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Frame = +3 Query: 123 GIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKF---DADVSL 293 GII++ +T+ +D AL+ P R D+ +++ + D+ R E + +K+F + + Sbjct: 1768 GIIIIGSTHLPRKVDPALISPNRLDKLMNIRIIDIFERQEKFSILLHSKRFYFKNKLLHF 1827 Query: 294 EVIAMRTPGFSG 329 A RT G++G Sbjct: 1828 NEFAYRTMGYNG 1839
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 449 Score = 34.7 bits (78), Expect = 0.12 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +3 Query: 75 TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 197 T + LL +DG + I+ TN + LD AL+RPGR D Sbjct: 323 TFSGLLNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRVD 363
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 420 Score = 34.7 bits (78), Expect = 0.12 Identities = 18/41 (43%), Positives = 23/41 (56%) Frame = +3 Query: 75 TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 197 T + LL +DG + IV TN + LD AL+RPGR D Sbjct: 309 TFSGLLNALDGVASSEARIVFMTTNFIERLDPALVRPGRVD 349
>CZF1_CANAL (P28875) Zinc finger protein 1| Length = 388 Score = 31.2 bits (69), Expect = 1.3 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = -3 Query: 395 NSGPP-TSAC*YGCLV--QKIRQVCSTEPRCSHCNDFKRN 285 NSG P T GCL Q+ ++ C T PRC+ C + N Sbjct: 305 NSGKPITKRSRMGCLTCRQRKKRCCETRPRCTECTRLRLN 344
>MDH_PYRAE (Q8ZVB2) Malate dehydrogenase (EC 1.1.1.37)| Length = 309 Score = 29.3 bits (64), Expect = 4.9 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 8/63 (12%) Frame = +3 Query: 90 LTEMDGFEGN----TGIIVVAATNRAD----ILDSALLRPGRFDRQVSVDVPDVRGRTEI 245 +TE+ GF N G+ ++A + D ++ S +L+ R V V+VP + GR+ + Sbjct: 214 ITELRGFSSNWGPGAGLAIMAEAVKRDAKRALIASVVLQGEYGVRDVPVEVPIILGRSGV 273 Query: 246 LKV 254 +KV Sbjct: 274 VKV 276
>ZBT20_HUMAN (Q9HC78) Zinc finger and BTB domain-containing protein 20 (Zinc| finger protein 288) (Dendritic-derived BTB/POZ zinc finger protein) Length = 741 Score = 28.9 bits (63), Expect = 6.4 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = -3 Query: 350 QKIRQVCSTEPRCSHCNDFKRNIGIKLLVATVHLE 246 Q++ + ST P +HC R + I+ LV +H++ Sbjct: 296 QQMERYLSTTPETTHCRKQPRPVRIQTLVGNIHIK 330
>INT1_MOUSE (Q6P4S8) Integrator complex subunit 1 (Int1)| Length = 2126 Score = 28.9 bits (63), Expect = 6.4 Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 15/113 (13%) Frame = -1 Query: 391 PVLPRRPANMAASFRRFAKSAPLNPGVLIAMTSR----ETSASNFLL------LPCTLRI 242 P RRP+ A S PG IA+ S+ E+ ++ LL LP + Sbjct: 6 PTTVRRPSAAAKP------SGHPPPGDFIALGSKGQASESKTTSTLLKPAPSGLPSERKR 59 Query: 241 SVLPRTSGTSTLTCLSKRPGLS-----KAESKMSALLVAATTMIPVFPSKPSI 98 SGTS LT L+KRP LS A +++ VA I +PS+ Sbjct: 60 DASASLSGTSALTGLTKRPKLSSTPPLSALGRLAEAAVAEKRAISPSIKEPSV 112
>GATB_BORBU (O51316) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B| (EC 6.3.5.-) (Asp/Glu-ADT subunit B) Length = 485 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%) Frame = -3 Query: 311 SHCN----DFKRNIGIKLLVATVHLENLCPSTHIRNINTHLSVKAS 186 S CN F+ ++ + L+V +E+ P I+N+N+ S+KA+ Sbjct: 183 SECNMENGSFRCDVNVNLIVKENGVEHKTPIAEIKNLNSFKSIKAA 228
>RPOC1_SINAL (P46819) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) Length = 688 Score = 28.5 bits (62), Expect = 8.4 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +2 Query: 308 ENTWVQWSRLGESSERGSHISRPTWEDRNFLK 403 EN+ V+W +LGE G+ WEDR ++ Sbjct: 221 ENSLVEWKQLGEEGPTGNE-----WEDRKIVR 247
>RPOC1_ARATH (P56763) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) Length = 680 Score = 28.5 bits (62), Expect = 8.4 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +2 Query: 308 ENTWVQWSRLGESSERGSHISRPTWEDRNFLK 403 EN+ V+W +LGE G+ WEDR ++ Sbjct: 213 ENSLVEWKQLGEEGPTGNE-----WEDRKIVR 239 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,446,416 Number of Sequences: 219361 Number of extensions: 1072907 Number of successful extensions: 3101 Number of sequences better than 10.0: 240 Number of HSP's better than 10.0 without gapping: 2984 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3069 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
