Clone Information

BLAST Search Result

Clone Name	baet16b01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2	37	0.017
2	NAGS_MOUSE (Q8R4H7) N-acetylglutamate synthase, mitochondrial pr...	37	0.022
3	MAP2_RAT (P15146) Microtubule-associated protein 2 (MAP 2) (MAP-2)	35	0.063
4	CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor	35	0.082
5	PGK_MYCAV (O32848) Phosphoglycerate kinase (EC 2.7.2.3) (Fragment)	34	0.14
6	EST1A_HUMAN (Q86US8) Telomerase-binding protein EST1A (Ever shor...	33	0.24
7	CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor	33	0.24
8	CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor	33	0.24
9	PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)	33	0.24
10	MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1	33	0.41
11	MYO1F_HUMAN (O00160) Myosin If (Myosin-IE)	33	0.41
12	CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor	33	0.41
13	UL61_HCMVA (P16818) Hypothetical protein UL61	33	0.41
14	3BP1_HUMAN (Q9Y3L3) SH3 domain-binding protein 1 (3BP-1)	33	0.41
15	CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor	32	0.53
16	CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor	32	0.70
17	UMP1_ARATH (Q9LKA5) Unknown mitochondrial protein At3g15000	31	1.2
18	MARCS_HUMAN (P29966) Myristoylated alanine-rich C-kinase substra...	31	1.2
19	CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)	31	1.2
20	TOP3_ECOLI (P14294) DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoi...	31	1.2
21	CSN6_MOUSE (O88545) COP9 signalosome complex subunit 6 (Signalos...	31	1.2
22	PKHA4_RAT (P60669) Pleckstrin homology domain-containing family ...	31	1.2
23	VE2_HPV38 (Q80910) Regulatory protein E2	31	1.6
24	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	31	1.6
25	PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing famil...	31	1.6
26	IF2_PSE14 (Q48E77) Translation initiation factor IF-2	31	1.6
27	PKHA4_MOUSE (Q8VC98) Pleckstrin homology domain-containing famil...	31	1.6
28	CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor	30	2.0
29	PAK4_HUMAN (O96013) Serine/threonine-protein kinase PAK 4 (EC 2....	30	2.0
30	H1_PEA (P08283) Histone H1 (PsH1b) (PsH1b-40)	30	2.0
31	VE2_HPV41 (P27552) Regulatory protein E2	30	2.7
32	CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor	30	2.7
33	KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C...	30	2.7
34	SYE_HALMA (Q5V5N9) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Gluta...	30	3.5
35	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	30	3.5
36	ADA2A_MOUSE (Q01338) Alpha-2A adrenergic receptor (Alpha-2A adre...	30	3.5
37	MO4L2_HUMAN (Q15014) Mortality factor 4-like protein 2 (MORF-rel...	30	3.5
38	FOXO4_HUMAN (P98177) Putative fork head domain transcription fac...	30	3.5
39	IF2_PROMT (Q46J13) Translation initiation factor IF-2	30	3.5
40	ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (1...	29	4.5
41	ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (1...	29	4.5
42	ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (1...	29	4.5
43	VGLL_PRVKA (P52512) Glycoprotein L precursor	29	4.5
44	SFRS4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4	29	4.5
45	SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (S...	29	4.5
46	CXA3_BOVIN (P41987) Gap junction alpha-3 protein (Connexin-44) (...	29	4.5
47	CUL3_CAEEL (Q17391) Cullin-3	29	4.5
48	EST1A_PONPY (Q5RAK6) Telomerase-binding protein EST1A (Ever shor...	29	5.9
49	COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor	29	5.9
50	CC021_HUMAN (Q8NBI6) Protein C3orf21	29	5.9
51	IF2_PSESM (Q87WQ5) Translation initiation factor IF-2	29	5.9
52	CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity fa...	29	5.9
53	GAG_SIVV1 (P27972) Gag polyprotein [Contains: Core protein p17; ...	29	5.9
54	MILK1_HUMAN (Q8N3F8) Molecule interacting with Rab13 (MIRab13) (...	29	5.9
55	SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inosit...	29	5.9
56	UBP19_HUMAN (O94966) Ubiquitin carboxyl-terminal hydrolase 19 (E...	29	5.9
57	CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodp...	29	5.9
58	CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor	28	7.7
59	CBL_MLVCN (P23092) Transforming protein cbl	28	7.7
60	PROQ_YERPE (Q8ZFJ9) ProP effector	28	7.7
61	CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor	28	7.7
62	IF2_THEFY (Q47RV1) Translation initiation factor IF-2	28	7.7
63	CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22	28	7.7
64	NYLB_FLASK (P07061) 6-aminohexanoate-dimer hydrolase (EC 3.5.1.4...	28	7.7
65	CASC3_HUMAN (O15234) Protein CASC3 (Cancer susceptibility candid...	28	7.7
66	SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (S...	28	7.7
67	SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)	28	7.7
68	CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) ...	28	7.7
69	CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding...	28	7.7
70	SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-as...	28	7.7
71	IF2_PROMM (Q7V5M4) Translation initiation factor IF-2	28	7.7
72	RUVB_PROAC (Q6A8K7) Holliday junction ATP-dependent DNA helicase...	28	7.7
73	EBNA6_EBV (P03204) Epstein-Barr nuclear antigen 6 (EBV nuclear a...	28	7.7
74	DEND_MOUSE (Q80TS7) Dendrin	28	7.7

>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 22/70 (31%), Positives = 29/70 (41%)
 Frame = -2

Query: 423 AAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPAER 244
           AA E  AQ   P  P P + +   G P   G     + GP+   V  +  SS+ +P  ER
Sbjct: 134 AAPEAPAQRPTPGGPRPGQQQQRPGAPAQGGPRPGPKPGPKTPRVGNNPYSSQPAPERER 193

Query: 243 PDWNGSPSTP 214
           P     P  P
Sbjct: 194 PAARPGPGGP 203

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>NAGS_MOUSE (Q8R4H7) N-acetylglutamate synthase, mitochondrial precursor (EC|
           2.3.1.1) (Amino-acid acetyltransferase) [Contains:
           N-acetylglutamate synthase long form; N-acetylglutamate
           synthase short form; N-acetylglutamate synthase
           conserved domain form]
          Length = 527

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 28/96 (29%), Positives = 40/96 (41%)
 Frame = -2

Query: 438 RRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGS 259
           RRL+ +AR +GA++  P          A+   G+ GR                      S
Sbjct: 29  RRLSGSARRRGAKSASPGRRLSTARAHAEDAEGAKGRVQ--------------------S 68

Query: 258 PPAERPDWNGSPSTPIGTLARISGRSLSRNLIDAFM 151
           P  E P W   P TP+ + A  +GRSL +  I AF+
Sbjct: 69  PAVEEPSWTPLP-TPLESPAPPAGRSLVQRDIQAFL 103

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>MAP2_RAT (P15146) Microtubule-associated protein 2 (MAP 2) (MAP-2)|
          Length = 1861

 Score = 35.4 bits (80), Expect = 0.063
 Identities = 20/54 (37%), Positives = 27/54 (50%)
 Frame = -2

Query: 432  LNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRS 271
            L    +EK  +TG  R  TP R E+AK  P ++ R + RR     K  E +K S
Sbjct: 1428 LEKHRKEKPFKTGRGRISTPERREVAKKEPSTVSRDEVRRKKAVYKKAELAKES 1481

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>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 35.0 bits (79), Expect = 0.082
 Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
 Frame = -2

Query: 426 SAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSP-PA 250
           S A      +GEP AP       AKG PG  G       GP   A E  KR +RG P PA
Sbjct: 413 SGAPGPKGNSGEPGAPGNKGDTGAKGEPGPAG-----VQGPPGPAGEEGKRGARGEPGPA 467

Query: 249 ERPDWNGSPSTP 214
             P   G    P
Sbjct: 468 GLPGPAGERGAP 479

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>PGK_MYCAV (O32848) Phosphoglycerate kinase (EC 2.7.2.3) (Fragment)|
          Length = 388

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -2

Query: 441 GRRLNSAAREKGAQTGEPRAPTPARMEMAKG--RPGSLGRYDKRRAGPEAKAVERSKRSS 268
           GRR   A++E  A  G    P   R   A G  R   LGR   RR GP  + V+R +R +
Sbjct: 63  GRRAPRASQE-WAGPGVVAGPGGRRARRAAGPARAAGLGRGGHRRPGPR-RGVDRRRRPA 120

Query: 267 RGSPPAERP 241
            G  P  RP
Sbjct: 121 AGKHPVRRP 129

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>EST1A_HUMAN (Q86US8) Telomerase-binding protein EST1A (Ever shorter telomeres|
           1A) (Telomerase subunit EST1A) (EST1-like protein A)
           (hSmg5/7a)
          Length = 1419

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -2

Query: 441 GRRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRY---DKRR 313
           G R+ +A  EKG + G+         + A+GRPGS  RY   DKRR
Sbjct: 206 GGRVGAAKGEKGKRMGKGEGVRETHDDPARGRPGSAKRYSRSDKRR 251

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>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = -2

Query: 399 TGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSP-PAERPDWNGSP 223
           +GEP AP       AKG PG+ G       GP   A E  KR +RG P P+  P   G  
Sbjct: 422 SGEPGAPGNKGDTGAKGEPGATG-----VQGPPGPAGEEGKRGARGEPGPSGLPGPPGER 476

Query: 222 STP 214
             P
Sbjct: 477 GGP 479

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>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor|
          Length = 1464

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 20/48 (41%), Positives = 23/48 (47%)
 Frame = -2

Query: 399 TGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSP 256
           +GEP AP       AKG PG +G       GP   A E  KR +RG P
Sbjct: 433 SGEPGAPGSKGDTGAKGEPGPVG-----VQGPPGPAGEEGKRGARGEP 475

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>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)|
          Length = 939

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
 Frame = -2

Query: 444 AGRRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLG--------RYDKRRAGPEAKAV 289
           A R   +AA    A +  P AP+   +   +G+    G        R D  RA P  +A 
Sbjct: 45  APRVAAAAAAAAAAASAAPSAPSDRLLFSRRGQGADPGGKAQDAQPRPDVARADPRLEAA 104

Query: 288 ERSKRSSRGSPPAERPDWNGSPSTPIGTLARISGRS 181
             +   S G P  +R   +G+PST +       GRS
Sbjct: 105 SGAGADSPGPPRQDRGPLHGAPSTALRPAGPGQGRS 140

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>MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1|
          Length = 2042

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 23/86 (26%), Positives = 34/86 (39%)
 Frame = -2

Query: 438  RRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGS 259
            R     AR+   +T EP  PT A  + +      +         P+  +  R+ RSS  +
Sbjct: 1528 RATRGRARKSSVKTPEPAVPTAAEPQPSASTDQPIT--------PKPTSRGRAHRSSAKT 1579

Query: 258  PPAERPDWNGSPSTPIGTLARISGRS 181
            P  + P   G P TP  T     GR+
Sbjct: 1580 PELQPPTSTGQPFTPRPTSGATQGRT 1605

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>MYO1F_HUMAN (O00160) Myosin If (Myosin-IE)|
          Length = 1098

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
 Frame = -2

Query: 396  GEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERS--KRSSRGSP-PAE------- 247
            G P++  P R  MAKG+P    +   R A    + ++R+    S+RG P P E       
Sbjct: 918  GLPKSSKPTRKGMAKGKPRRSSQAPTRAAPAPPRGMDRNGVPPSARGGPLPLEIMSGGGT 977

Query: 246  -RPDWNGSPSTPIGTLARISGRSLSRN 169
             RP   G PST +G   R   R  S +
Sbjct: 978  HRPP-RGPPSTSLGASRRPRARPPSEH 1003

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>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = -2

Query: 399 TGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSP-PAERPDWNGSP 223
           +GEP AP       AKG PG  G       GP   A E  KR +RG P P+  P   G  
Sbjct: 422 SGEPGAPGNKGDTGAKGEPGPAGVQ-----GPPGPAGEEGKRGARGEPGPSGLPGPPGER 476

Query: 222 STP 214
             P
Sbjct: 477 GGP 479

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>UL61_HCMVA (P16818) Hypothetical protein UL61|
          Length = 431

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
 Frame = -2

Query: 441 GRRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYD--KRRAGPEAKAVERSKRSS 268
           G  L +  R+   + G  RA TP  +  A G PGS  R     R  GPE       +R  
Sbjct: 215 GTSLGTGVRDPAPRGGRGRARTPGPVHSAAGGPGSRRRSPGAARDPGPE----PGEERGG 270

Query: 267 RGSPPAERP---DWNGSPSTPI 211
            G PP   P   D N  P   +
Sbjct: 271 GGKPPLGSPRATDGNRDPGAGV 292

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>3BP1_HUMAN (Q9Y3L3) SH3 domain-binding protein 1 (3BP-1)|
          Length = 701

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
 Frame = -2

Query: 432 LNSAAREKGAQTGEPRAPTPARMEMAKGRPGS------LGRYDKRRAGPEAKAVERSKRS 271
           L SAA ++  ++  P  P PA  ++ +  P +      + R  KR A             
Sbjct: 525 LASAATKERTESEVP--PRPASPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSG 582

Query: 270 SRGSPPAER-PDWNGSPSTPIGTLARISGRSL 178
           SR SPPA   P  +GSP TP     R+ G SL
Sbjct: 583 SRSSPPAPPLPPGSGSPGTPQALPRRLVGSSL 614

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>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor|
          Length = 1460

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 20/48 (41%), Positives = 22/48 (45%)
 Frame = -2

Query: 399 TGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSP 256
           +GEP AP       AKG PG  G       GP   A E  KR +RG P
Sbjct: 429 SGEPGAPGNKGDTGAKGEPGPTGIQ-----GPPGPAGEEGKRGARGEP 471



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/61 (34%), Positives = 24/61 (39%)
 Frame = -2

Query: 396  GEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPAERPDWNGSPST 217
            G P  P PA  E  KG  G  G     R G             +GSP A+ P   G+P T
Sbjct: 889  GPPGPPGPAGKEGGKGARGETG--PAGRPGEVGPPGPPGPAGEKGSPGADGP--AGAPGT 944

Query: 216  P 214
            P
Sbjct: 945  P 945

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>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor|
          Length = 1372

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
 Frame = -2

Query: 396 GEPRAPTPARMEMA-KGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSP----PAERPDWN 232
           GEP  P  ++ E   KG PGS G       GP   + E  KR S G P    PA  P   
Sbjct: 352 GEP-GPAGSKGETGNKGEPGSAGAQ-----GPPGPSGEEGKRGSPGEPGSAGPAGPPGLR 405

Query: 231 GSPST 217
           GSP +
Sbjct: 406 GSPGS 410

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>UMP1_ARATH (Q9LKA5) Unknown mitochondrial protein At3g15000|
          Length = 395

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 330 RYDKRRAGPEAKAVERSKRSSRGSPPAERPDWNGSPSTP 214
           R D+ R    ++  ER + +  G PP +RP   G P  P
Sbjct: 217 RNDRPRNNDRSRNFERRRENMAGGPPPQRPPMGGPPPPP 255

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>MARCS_HUMAN (P29966) Myristoylated alanine-rich C-kinase substrate (MARCKS)|
           (Protein kinase C substrate, 80 kDa protein, light
           chain) (PKCSL) (80K-L protein)
          Length = 331

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -2

Query: 426 SAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPA- 250
           +AA E+GA  G+P+   P    +A  +P +    D+ +A  E   VE  K    G+  A 
Sbjct: 221 AAAGEEGAAGGDPQEAKPQEAAVAPEKPPA---SDETKAAEEPSKVEEKKAEEAGASAAA 277

Query: 249 -ERPDWNGSPSTP 214
            E P   G  + P
Sbjct: 278 CEAPSAAGPGAPP 290

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>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)|
          Length = 1027

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
 Frame = -2

Query: 444 AGRRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSR 265
           AG    + A+  G  TGE   P    ++ + G PG +        G    A E  KR S 
Sbjct: 252 AGSPGQAGAKGDGGPTGEQGRPGAPGVKGSSGPPGDV--------GAPGHAGEAGKRGSP 303

Query: 264 GSP-PAERPDWNGSPSTP 214
           GSP PA  P   G    P
Sbjct: 304 GSPGPAGSPGPQGDRGLP 321

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>TOP3_ECOLI (P14294) DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)|
          Length = 653

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = -2

Query: 378 TPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPAE 247
           TP R       PGS G  DK++A P        KRS++ SPPA+
Sbjct: 609 TPVRQFRGIVAPGSGGSADKKKAAPR-------KRSAKKSPPAD 645

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>CSN6_MOUSE (O88545) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
           (SGN6) (JAB1-containing signalosome subunit 6)
          Length = 324

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
 Frame = -1

Query: 304 GGESGGEIEAELPGIAASGETGLERQPEHADRHLGPHQRPVVVAELD-----RRLHGDRC 140
           GG SG E++A +P + ASG TG      H          P+V+  +       R    R 
Sbjct: 13  GGSSGMEVDAAVPSVMASGVTGSVSVALH----------PLVILNISDHWIRMRSQEGRP 62

Query: 139 WWLIGALVGR 110
             +IGAL+G+
Sbjct: 63  MQVIGALIGK 72

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>PKHA4_RAT (P60669) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 779

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 10/85 (11%)
 Frame = -2

Query: 438 RRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAG---------PEAKAVE 286
           R L  A+R +G   G PR+P   R     G PG     ++R  G         P ++   
Sbjct: 146 RALGKASRAEGEDCGLPRSPARPRPGEGPGGPGGPPEVNRREEGRTSESPEVAPLSRGPG 205

Query: 285 RSKRSSRGSPPAERPD-WNGSPSTP 214
           R +  + GS    +PD W+    +P
Sbjct: 206 RHEMHAPGSSADLQPDTWSRRTRSP 230

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>VE2_HPV38 (Q80910) Regulatory protein E2|
          Length = 441

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
 Frame = -2

Query: 438 RRLNSAAREKGAQTG--EPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSR 265
           RR  S +R +    G  + R  +     ++  R    G  D RR GP  ++  RS   + 
Sbjct: 263 RRRKSRSRSRSTNRGGRDTRRSSSRGSSVSPTRGRRRGGGDSRRRGPVTRSRSRSLSRAS 322

Query: 264 GSPPAERPDWNGSPSTPIGTLARISGRSLSRNLIDA 157
            +     PD  G   T + ++ R SG  L+R L DA
Sbjct: 323 SAGGGISPDKVG---TAVRSVGRQSGGRLTRLLADA 355

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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
 Frame = -2

Query: 438 RRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGS 259
           RR +S +R       + +  T  RM+M K     + +  +RR  P      R +  S   
Sbjct: 520 RRRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAP 579

Query: 258 PPAER-----PDWNGSPSTP 214
           PP  R     P    +PS P
Sbjct: 580 PPRRRRTPTPPPRRRTPSPP 599

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>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 779

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 3/132 (2%)
 Frame = -2

Query: 438 RRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRS-SRG 262
           R L  A+R +G   G+PR+P   +     G PG      +   G  +++ E ++ S  RG
Sbjct: 146 RALGRASRAEGDDYGQPRSPARPQPGEGPGGPGGPPEVSRGEEGRISESPEVTRLSRGRG 205

Query: 261 SPPAERPDWNGSPSTPIGTLARISGRSLSR-NLIDAFMGIDXXXXXXXXXXXXXLILRRT 85
            P    P    SP+T +      SG  + R    D F  +                 RR 
Sbjct: 206 RPRLLTP----SPTTDLH-----SGLQMRRARSPDLFTPLSRPPSPLSLPRPRSAPARRP 256

Query: 84  SSHDG-TAPPAR 52
            +  G TAPPAR
Sbjct: 257 PAPSGDTAPPAR 268

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>IF2_PSE14 (Q48E77) Translation initiation factor IF-2|
          Length = 843

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
 Frame = -2

Query: 438 RRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGS-----LGRYDKRRAGPEAKAVERSKR 274
           R + +AAR+K  +  + RA   AR + A G+P S     +   +  R  P   A   +  
Sbjct: 112 RAVENAARQKAEEEAKRRAEEDARNQPAAGQPASAPAQPVAAAEPVREAPAPAAAAPAPA 171

Query: 273 SSRGSPPAERPDWNGSPSTP 214
           S+  S  A + D    P  P
Sbjct: 172 SAAPSADARKRDEQRRPDKP 191

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>PKHA4_MOUSE (Q8VC98) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 588

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = -2

Query: 438 RRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRG 262
           R L  A+R +G   G PR+P   R     G PG     ++R  G  +++ E + R SRG
Sbjct: 146 RALGRASRAEGEDCGLPRSPARPRPGEGPGGPGGPPEVNRREEGRISESPEVA-RLSRG 203

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>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 21/72 (29%), Positives = 28/72 (38%)
 Frame = -2

Query: 429 NSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPA 250
           N A     A  GEP  P P R    KGR        K+  G + K  +++K     SPP 
Sbjct: 226 NLAPAATVAPQGEPETPRPRRKGKGKGR--------KKGRGRKGKGRKKNKEIWTSSPPP 277

Query: 249 ERPDWNGSPSTP 214
           +  +   S   P
Sbjct: 278 DSAENQTSTDIP 289



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 23/71 (32%), Positives = 31/71 (43%)
 Frame = -2

Query: 420  AREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPAERP 241
            A EKG Q G P    P   +   G PG +G       GP   A    ++ S+GSP +  P
Sbjct: 1417 AGEKGDQ-GLPGVQGPPGPKGDPGPPGPIGSLG--HPGPPGVAGPLGQKGSKGSPGSMGP 1473

Query: 240  DWNGSPSTPIG 208
              +  P+ P G
Sbjct: 1474 RGDTGPAGPPG 1484

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>PAK4_HUMAN (O96013) Serine/threonine-protein kinase PAK 4 (EC 2.7.11.1)|
           (p21-activated kinase 4) (PAK-4)
          Length = 591

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 28/97 (28%), Positives = 35/97 (36%), Gaps = 23/97 (23%)
 Frame = -2

Query: 426 SAAREKGAQTGEPRAPTPARME---------MAKGRPG---SLGRY-----------DKR 316
           S  R    +   P  P  AR E          A+G PG   S GR+           D+R
Sbjct: 93  SVTRSNSLRRDSPPPPARARQENGMPEEPATTARGGPGKAGSRGRFAGHSEAGGGSGDRR 152

Query: 315 RAGPEAKAVERSKRSSRGSPPAERPDWNGSPSTPIGT 205
           RAGPE +   +S R   G P     D        +GT
Sbjct: 153 RAGPEKR--PKSSREGSGGPQESSRDKRPLSGPDVGT 187

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>H1_PEA (P08283) Histone H1 (PsH1b) (PsH1b-40)|
          Length = 265

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 21/62 (33%), Positives = 32/62 (51%)
 Frame = -2

Query: 426 SAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPAE 247
           SAA +K A   +P+A T A+ +  K +P          A P+AKAV + K +S+    A 
Sbjct: 129 SAAAKKPA-VAKPKAKTAAKAKSVKAKPA---------AKPKAKAVVKPKVASKAKAVAA 178

Query: 246 RP 241
           +P
Sbjct: 179 KP 180

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>VE2_HPV41 (P27552) Regulatory protein E2|
          Length = 387

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -2

Query: 435 RLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAK 295
           R   + R +  +TGEP AP P R   A GR  S     +  A P ++
Sbjct: 221 RPQGSRRRRNEETGEPVAPAPKRRRGAYGRRSSPKAQRRTAASPVSR 267

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>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor|
          Length = 1364

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 20/66 (30%), Positives = 28/66 (42%)
 Frame = -2

Query: 444 AGRRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSR 265
           AG +  S  + +    G+P  P P+  E  +G  G +G      AGP      R    SR
Sbjct: 349 AGSKGESGNKGEPGAVGQPGPPGPSGEEGKRGSTGEIG-----PAGPPGPPGLRGNPGSR 403

Query: 264 GSPPAE 247
           G P A+
Sbjct: 404 GLPGAD 409

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>KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C member 3|
           (Voltage-gated potassium channel subunit Kv3.3)
           (KSHIIID)
          Length = 757

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
 Frame = -2

Query: 345 PGSLGRYDKRRA----GPEAKAVERSKRSSRGSPPAERPDWN--GSPS 220
           PGS GRY + RA       A + + S R + G+PP    DW   G PS
Sbjct: 695 PGSRGRYSRDRACFLLTDYAPSPDGSIRKATGAPPLPPQDWRKPGPPS 742

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>SYE_HALMA (Q5V5N9) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 579

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = -1

Query: 298 ESGGEIEAELPGIAASGETGLERQPEHADRHLGPHQRPVVVAELDRRLHGDRCW 137
           + GG +E ++ G   +GE  L    E   R   P    VVV   D   HGDR W
Sbjct: 430 DHGGLVERQIVGGPDAGEPPLHPDYEERGRREIPVTSGVVVEGDDLPDHGDRIW 483

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/66 (25%), Positives = 26/66 (39%)
 Frame = -2

Query: 438 RRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGS 259
           RR +S +R       + +  T  RM+M K     + +  +RR  P      R +  S   
Sbjct: 518 RRRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSSRRRRSPSPPPARRRRSPSPAP 577

Query: 258 PPAERP 241
           PP   P
Sbjct: 578 PPPPPP 583

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>ADA2A_MOUSE (Q01338) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)|
           (Alpha-2A adrenoreceptor) (Alpha-2AAR)
          Length = 450

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
 Frame = -2

Query: 444 AGRRLNSAAREKGA-QTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSS 268
           A RR N    E+GA  TG    P P ++  A G P   G  D      +A  +E S  S 
Sbjct: 246 ADRRPNGLGPERGAGPTGAEAEPLPTQLNGAPGEPAPAGPRD-----GDALDLEESSSSE 300

Query: 267 RGS--PPAERPD 238
                P   RPD
Sbjct: 301 HAERPPGPRRPD 312

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>MO4L2_HUMAN (Q15014) Mortality factor 4-like protein 2 (MORF-related gene X|
           protein) (Transcription factor-like protein MRGX)
           (MSL3-2 protein)
          Length = 288

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -2

Query: 420 AREKGAQTGEP---RAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPA 250
           ++ +G Q+ E    + PT + M+ +K R  S G   K+ AGP+ K +E +     G   A
Sbjct: 8   SQPRGQQSAEEENFKKPTRSNMQRSKMRGASSG---KKTAGPQQKNLEPALPGRWGGRSA 64

Query: 249 ERP 241
           E P
Sbjct: 65  ENP 67

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>FOXO4_HUMAN (P98177) Putative fork head domain transcription factor AFX1|
           (Forkhead box protein O4)
          Length = 505

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
 Frame = -2

Query: 342 GSLGRYDKRRAGPEAKAVE----RSKRSSRGSPPAERPDWNGSPSTPIGTLARISGRSLS 175
           G  G+  +RRA     + +    RSK   +       P    +P++P+G  A+ SG   S
Sbjct: 185 GKSGKAPRRRAASMDSSSKLLRGRSKAPKKKPSVLPAPPEGATPTSPVGHFAKWSGSPCS 244

Query: 174 RNLIDAFM 151
           RN  +A M
Sbjct: 245 RNREEADM 252

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>IF2_PROMT (Q46J13) Translation initiation factor IF-2|
          Length = 1183

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
 Frame = -2

Query: 405 AQTGEPRAPTPARMEMAKGRPGSLGRY--DKRRAGPEAKAVERSKRSSRGSPPAERPDWN 232
           ++ G P+ PT A  +    RPGS  R     R   P  +   R   ++R +    RP  N
Sbjct: 310 SRPGAPKPPTAANRQGLSNRPGSNNRIGGTGRPGSPNRQGPNRGGVANRTTQGQNRPGAN 369

Query: 231 GSPSTPI 211
                P+
Sbjct: 370 NRAGAPV 376

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>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 28/81 (34%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
 Frame = -2

Query: 396 GEPRAPTP------ARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSP--PAERP 241
           GE   P P      A+   A G PG     D+  AG    A  +S RS   SP  PA  P
Sbjct: 222 GEEETPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAG---AATPKSCRSGAASPGAPAPAP 278

Query: 240 DWNGSPSTPIGTLARISGRSL 178
               +PS P G L     R L
Sbjct: 279 ASAPAPSRPGGGLLPPGARIL 299

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>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 28/81 (34%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
 Frame = -2

Query: 396 GEPRAPTP------ARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSP--PAERP 241
           GE   P P      A+   A G PG     D+  AG    A  +S RS   SP  PA  P
Sbjct: 222 GEEETPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAG---AATPKSCRSGAASPGAPAPAP 278

Query: 240 DWNGSPSTPIGTLARISGRSL 178
               +PS P G L     R L
Sbjct: 279 ASAPAPSRPGGGLLPPGARIL 299

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>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 28/81 (34%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
 Frame = -2

Query: 396 GEPRAPTP------ARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSP--PAERP 241
           GE   P P      A+   A G PG     D+  AG    A  +S RS   SP  PA  P
Sbjct: 222 GEEETPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAG---AATPKSCRSGAASPGAPAPAP 278

Query: 240 DWNGSPSTPIGTLARISGRSL 178
               +PS P G L     R L
Sbjct: 279 ASAPAPSRPGGGLLPPGARIL 299

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>VGLL_PRVKA (P52512) Glycoprotein L precursor|
          Length = 156

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 104 PPTTNQSPD*PPTSIPMKASIKFRDNDRPLMRAKVPIG 217
           PP T      PPT  P +  +++ D D PL+  + P+G
Sbjct: 35  PPVTPA----PPTRAPRREELEWDDEDHPLLGLEPPVG 68

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>SFRS4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4|
          Length = 489

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 13/100 (13%)
 Frame = -2

Query: 429 NSAAREKGAQTGEPRAPTPA---RMEMAK---GRPGSLGRYDKRRAGPEAKAVERSKRSS 268
           +S++ +K   T   R+P+ +     E AK   G+ GS    +     PE +A  RS   S
Sbjct: 386 SSSSSKKKKDTDHSRSPSRSVSKEREHAKAESGQRGSRAEGESEAPNPEPRARSRSTSKS 445

Query: 267 RGSPPAERPDWNGSPS-------TPIGTLARISGRSLSRN 169
           + + PAE    + S S       +P  + +R   RS SR+
Sbjct: 446 KPNVPAESRSRSKSASKTRSRSKSPSRSASRSPSRSRSRS 485

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>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2) (Clk4-associating SR-related
           protein)
          Length = 653

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 29/86 (33%), Positives = 36/86 (41%)
 Frame = -2

Query: 426 SAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPAE 247
           +AA   GA  G+P AP P     A GR  S  R   R +   A     S+ SSR S  + 
Sbjct: 329 AAAAASGAAPGKPPAP-PQTGGPAPGRNASTRR---RSSSSSASRTSSSRSSSRSSSRSR 384

Query: 246 RPDWNGSPSTPIGTLARISGRSLSRN 169
           R  +        G  AR   RS SR+
Sbjct: 385 RGYYRS------GRHARSRSRSWSRS 404

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>CXA3_BOVIN (P41987) Gap junction alpha-3 protein (Connexin-44) (Cx44)|
          Length = 406

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = -2

Query: 396 GEPRAPTPARMEMAKGRPGSLGRYDKR-RAGPEAKAVERSKRSSR-GSPPAERPDWNGSP 223
           G P  P PA +    G PG  G    R RA   A      + SSR  SPPA  P    SP
Sbjct: 286 GYPEPPPPAALPGTPGTPGGGGNQGLRARAQNWANREAEPQTSSRKASPPAPTPPAAESP 345

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>CUL3_CAEEL (Q17391) Cullin-3|
          Length = 777

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = -1

Query: 319 AESWPGGESGGEIEAELPGIAASGETGLERQPEHADRHLGPHQRPVVV 176
           A  +P  ++    E   PG ++SGE+  ER+PEH    +  HQ  +++
Sbjct: 565 ATFYPPPKASMSNEENGPGPSSSGESMKERKPEHKILQVNTHQMIILL 612

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>EST1A_PONPY (Q5RAK6) Telomerase-binding protein EST1A (Ever shorter telomeres|
           1A) (Telomerase subunit EST1A) (EST1-like protein A)
          Length = 1419

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = -2

Query: 441 GRRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRY---DKRR 313
           G R+ +A  EKG +  +         + A+G+PGS  RY   DKRR
Sbjct: 206 GDRVRAAKGEKGKRIEKGEGMRKTNDDPAQGKPGSAKRYSRSDKRR 251

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>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor|
          Length = 1736

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 21/79 (26%), Positives = 30/79 (37%)
 Frame = -2

Query: 444  AGRRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSR 265
            AG R    A+    + GEP  P         G PG LG+  +  AG       + ++ ++
Sbjct: 1281 AGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGK--RGPAGTPGPEGRQGEKGAK 1338

Query: 264  GSPPAERPDWNGSPSTPIG 208
            G P A        P  P G
Sbjct: 1339 GDPGAVGAPGKTGPVGPAG 1357

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>CC021_HUMAN (Q8NBI6) Protein C3orf21|
          Length = 393

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = -2

Query: 444 AGRRLNSAA--REKGAQTGEPRAPTPARMEMAKG 349
           +GR   S+A  R K A+ G P AP+P  +E+A+G
Sbjct: 43  SGRETFSSATKRLKEARAGAPAAPSPPALELARG 76

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>IF2_PSESM (Q87WQ5) Translation initiation factor IF-2|
          Length = 841

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
 Frame = -2

Query: 438 RRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAK---AVERSKRSS 268
           R + +AAR+K  +  + RA   AR + A G+P S        A P  +   A   +  S+
Sbjct: 112 RAVENAARQKAEEEAKRRAEEDARNQPAAGQPASAPAQPVAAAEPVREAPAAAAPAPASA 171

Query: 267 RGSPPAERPDWNGSPSTP 214
             S  A + D    P  P
Sbjct: 172 APSADARKRDEQRRPDKP 189

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>CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity factor 6|
          Length = 545

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/69 (27%), Positives = 25/69 (36%)
 Frame = -2

Query: 414 EKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPAERPDW 235
           + G  +GE +A  P       G P   G+  +R  GP  +          G PP   P  
Sbjct: 176 QSGQMSGEGKAGPPGSGSRGGGFPPGKGQ--RRFPGPPGQGDRFPGPVGPGGPPPHFPGM 233

Query: 234 NGSPSTPIG 208
            G P  P G
Sbjct: 234 QGPPRLPSG 242

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>GAG_SIVV1 (P27972) Gag polyprotein [Contains: Core protein p17; Core protein|
           p24; Core protein p15]
          Length = 520

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
 Frame = -2

Query: 441 GRRLNSAAREKGAQT--GEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVE-RSKRS 271
           GR + +  R   A T   EP AP P         P +   YD  +   +  A + +  R+
Sbjct: 444 GRWMGTKPRNFPAATLGAEPSAPPP---------PNNSTPYDPAKKLLQQYAEKGKQMRN 494

Query: 270 SRGSPPAERPDWN 232
              +PPA  PDWN
Sbjct: 495 QNRNPPANNPDWN 507

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>MILK1_HUMAN (Q8N3F8) Molecule interacting with Rab13 (MIRab13) (MICAL-like|
           protein 1)
          Length = 863

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = -2

Query: 426 SAAREKGAQTGEPRAPTPARMEM-AKGR-PGSLGRYDKRRAGPEAKAVERSKRSSRGSPP 253
           S++   GA+   P+A   AR ++  K R PG L       AG    A  ++  S+  +PP
Sbjct: 258 SSSAPAGAEADGPKASPEARPQIPTKPRVPGKLQELASPPAGRPTPAPRKASESTTPAPP 317

Query: 252 AERP 241
             RP
Sbjct: 318 TPRP 321

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>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1574

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -2

Query: 423  AAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPA 250
            AA+++ +QT EP+ P P R      RP    R     +G  + A  R +    G+PP+
Sbjct: 1091 AAQKESSQTIEPKRPPPPRPVAPPARPAPPQR-PPPPSGARSPAPARKEFGGVGAPPS 1147

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>UBP19_HUMAN (O94966) Ubiquitin carboxyl-terminal hydrolase 19 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 19)
           (Ubiquitin-specific-processing protease 19)
           (Deubiquitinating enzyme 19) (Zinc finger MYND
           domain-containing protein 9) (Fragment)
          Length = 1371

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = -2

Query: 423 AAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPAER 244
           AAR  GA+   P  PTP       G P  L   ++ RA  + K+  RS+ +   S     
Sbjct: 440 AARVGGAKVAVPTGPTPLDSTPPGGAPHPLTGQEEARAVEKDKSKARSEDTGLDSVATRT 499

Query: 243 P 241
           P
Sbjct: 500 P 500

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>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)|
          Length = 1670

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 9/88 (10%)
 Frame = -2

Query: 417  REKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPP----- 253
            R K  + G+P  P PA  +  KG  G  G      AG +     + KR   GSP      
Sbjct: 1390 RGKPGKDGKPGTPGPAGEKGNKGSKGEPG-----PAGSDGLPGLKGKRGDSGSPATWTTR 1444

Query: 252  ----AERPDWNGSPSTPIGTLARISGRS 181
                         PS P GT+   SG S
Sbjct: 1445 GFVFTRHSQTTAIPSCPEGTVPLYSGFS 1472

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>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor|
          Length = 1372

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/66 (30%), Positives = 26/66 (39%)
 Frame = -2

Query: 444 AGRRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSR 265
           AG +  S  + +    G    P P+  E  +G PG  G      AGP      R    SR
Sbjct: 357 AGSKGESGNKGEPGSVGAQGPPGPSGEEGKRGSPGEAG-----SAGPAGPPGLRGSPGSR 411

Query: 264 GSPPAE 247
           G P A+
Sbjct: 412 GLPGAD 417

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>CBL_MLVCN (P23092) Transforming protein cbl|
          Length = 390

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = -1

Query: 304 GGESGGEIEAELPGIAASGETGLER---QPEHADRHLGPHQRPVVVAELDRRLHGDRCWW 134
           GG SGG          A G  GL +   QP H   HL PH    V    D+++  ++CW 
Sbjct: 45  GGGSGGS--------GAGGLIGLMKDAFQPHHHHHHLSPHPPCTV----DKKM-VEKCWK 91

Query: 133 LIGALV 116
           L+  +V
Sbjct: 92  LMDKVV 97

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>PROQ_YERPE (Q8ZFJ9) ProP effector|
          Length = 237

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/70 (25%), Positives = 30/70 (42%)
 Frame = -2

Query: 402 QTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPAERPDWNGSP 223
           +T EPR P PA  + A  R           A PE +   +S R  +  PP  + + N   
Sbjct: 130 ETPEPRRPRPAGKKPAPRREAG--------AAPENRKPRQSPRPQQVRPPRPQVEENQPR 181

Query: 222 STPIGTLARI 193
             P+  ++++
Sbjct: 182 PVPVTDISKL 191

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>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor|
          Length = 1366

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 23/79 (29%), Positives = 29/79 (36%)
 Frame = -2

Query: 444 AGRRLNSAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSR 265
           AG +  S  + +    G    P P+  E  +G  G  G      AGP      R    SR
Sbjct: 351 AGSKGESGNKGEPGSAGAQGPPGPSGEEGKRGPNGEAGS-----AGPSGPPGLRGSPGSR 405

Query: 264 GSPPAERPDWNGSPSTPIG 208
           G P A+ P     P  P G
Sbjct: 406 GLPGADGPAGVMGPPGPRG 424

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>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = -2

Query: 408 GAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVER-SKRSSRGSPPAERPDWN 232
           GA  G P  P   R +  +  PG+ G      AG   + V R   R S  + PA RP   
Sbjct: 203 GASAGGPPRPQAPRPQAPRPGPGTAGGRPGSSAGGPPRPVPRPGPRPSPMNMPASRPTPP 262

Query: 231 GS--PST 217
           G   PST
Sbjct: 263 GGARPST 269

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>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22|
          Length = 907

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 32/123 (26%), Positives = 44/123 (35%), Gaps = 6/123 (4%)
 Frame = -2

Query: 390  PRAPTPARMEMAKGRPGSLGRYDKRR------AGPEAKAVERSKRSSRGSPPAERPDWNG 229
            P+A T  R   + G P   G  D R       +G  + +  R + S   SP  +R     
Sbjct: 796  PQASTAPR---SGGPPRKAGSVDNRSPLSRSPSGSRSPSPRRRRDSPSRSPVRDRESGGR 852

Query: 228  SPSTPIGTLARISGRSLSRNLIDAFMGIDXXXXXXXXXXXXXLILRRTSSHDGTAPPARR 49
            + +   G      GRS SR+                         RR SS D +AP  RR
Sbjct: 853  AAAAAPGNSEARRGRSYSRS----------PSRTRSPSPAPSRRRRRDSSSDASAPRKRR 902

Query: 48   RDS 40
            R+S
Sbjct: 903  RES 905

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>NYLB_FLASK (P07061) 6-aminohexanoate-dimer hydrolase (EC 3.5.1.46) (Nylon|
           oligomers degrading enzyme EII)
          Length = 392

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -3

Query: 146 SMLVANRGFGWSWGGLFCGGRHPMMGRRRLRAGEIVWRGRAVS-GWIGS 3
           ++ V   GFG++ GG+ C  R      R +  G +   GR VS GW+ S
Sbjct: 254 TITVDQTGFGFANGGVSCTARDLARVGRMMLDGGVAPGGRVVSQGWVES 302

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>CASC3_HUMAN (O15234) Protein CASC3 (Cancer susceptibility candidate gene 3|
           protein) (Metastatic lymph node protein 51) (MLN 51
           protein) (Barentsz protein) (Btz)
          Length = 703

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 327 YDKRRA-GPEAKAVERSKRSSRGSPPAERPDWNG 229
           YD R A  P+     R ++   GSPP   P+WNG
Sbjct: 242 YDIRSAHNPDDIKPRRIRKPRYGSPPQRDPNWNG 275

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>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2)
          Length = 659

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 28/86 (32%), Positives = 34/86 (39%)
 Frame = -2

Query: 426 SAAREKGAQTGEPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPAE 247
           +AA   G  TG+P AP P     A GR  S  R     +   + +   S RSS  S    
Sbjct: 329 AAAAASGVTTGKPPAP-PQPGGPAPGRNASARRRSSSSSSSSSASRTSSSRSSSRSSSRS 387

Query: 246 RPDWNGSPSTPIGTLARISGRSLSRN 169
           R    G      G  AR   RS SR+
Sbjct: 388 R---RGGGYYRSGRHARSRSRSWSRS 410

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>SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)|
          Length = 791

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
 Frame = +2

Query: 53  RAGGAVPSWDDVRRKISPPTTNQSPD*PP-----TSIPMKA 160
           +A G VP  DD + KI P   N+ P  PP     T+IP  A
Sbjct: 529 KAKGLVPE-DDTKEKIGPSKPNEIPQQPPPPSSATNIPSSA 568

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>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal|
           transduction protein CBL) (Proto-oncogene c-CBL)
           (Casitas B-lineage lymphoma proto-oncogene)
          Length = 913

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = -1

Query: 304 GGESGGEIEAELPGIAASGETGLER---QPEHADRHLGPHQRPVVVAELDRRLHGDRCWW 134
           GG SGG          A G  GL +   QP H   HL PH    V    D+++  ++CW 
Sbjct: 13  GGGSGGS--------GAGGLIGLMKDAFQPHHHHHHLSPHPPCTV----DKKM-VEKCWK 59

Query: 133 LIGALV 116
           L+  +V
Sbjct: 60  LMDKVV 65

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>CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,|
           ankyrin repeat and pleckstrin homology domains 2)
           (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE)
          Length = 1186

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 15/84 (17%)
 Frame = -2

Query: 381 PTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKR---------------SSRGSPPAE 247
           P P+    A G PG+ G   +    P        KR               SS G+  AE
Sbjct: 30  PPPSPSAAAAGAPGARGSEPRDPGSPRGSEEPGKKRHERLFHRQDALWISTSSAGTGGAE 89

Query: 246 RPDWNGSPSTPIGTLARISGRSLS 175
            P  + +P++P   ++   GR LS
Sbjct: 90  PPALSPAPASPARPVSPAPGRRLS 113

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>SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-associated|
           protein 114) (SAP 114) (SF3a120)
          Length = 793

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
 Frame = +2

Query: 53  RAGGAVPSWDDVRRKISPPTTNQSPD*PP-----TSIPMKA 160
           +A G VP  DD + KI P   N+ P  PP     T+IP  A
Sbjct: 531 KAKGLVPE-DDTKEKIGPSKPNEIPQQPPPPSSATNIPSSA 570

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>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2|
          Length = 1125

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 13/109 (11%)
 Frame = +2

Query: 65  AVPSWDDVRRKISPPTTNQSPD*PPTSIPMKASIKFRDNDRPLMRAKVPIGVLGLPFQSG 244
           A PS + V    +PPT   +P   PTS P K +   R  + P+ R  +P        +S 
Sbjct: 117 ARPSTESVAHP-APPTRPANPTPTPTSSPPKTAA--RPINAPISRPAIPSRPTAPTPRSA 173

Query: 245 --------LSAGG-DPR----ELRFDLSTAFASGPALRLSYRPNDPGLP 352
                    SAGG DPR          +T    GP  ++  RP  P  P
Sbjct: 174 NKPSSPVPPSAGGKDPRAGQTSTTSKATTVSGGGPRPKIVSRPQSPTAP 222

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>RUVB_PROAC (Q6A8K7) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 342

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = -2

Query: 393 EPRAPTPARMEMAKGRPGSLGRYDKRRAGPEAKAVERSKRSSRGSPPAERPDWNGSPSTP 214
           +P A  P + E A  RPG+L  +  ++   +   +  +   SRG+ P +    +G P   
Sbjct: 9   DPSAEPPEKAEEAALRPGALAEFGGQQRVADQLGLVLAASKSRGTTP-DHVLLSGPPGLG 67

Query: 213 IGTLARISGRSLS 175
             TLA I    +S
Sbjct: 68  KTTLAMIIASEMS 80

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>EBNA6_EBV (P03204) Epstein-Barr nuclear antigen 6 (EBV nuclear antigen 6)|
           (EBNA-6) (EBNA-3C) (EBNA-4B)
          Length = 992

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 40/125 (32%), Positives = 45/125 (36%), Gaps = 1/125 (0%)
 Frame = +2

Query: 44  SRRRAGGAVPSWDDVRRKISPPTTNQSPD*PPTSIPMKASIKFRDN-DRPLMRAKVPIGV 220
           SRRR G  V   DDV   I   TT  S      S P K   K +D   R   R K     
Sbjct: 496 SRRRRGACVVYDDDVIEVIDVETTEDSSS---VSQPNKPHRKHQDGFQRSGRRQKRAAPP 552

Query: 221 LGLPFQSGLSAGGDPRELRFDLSTAFASGPALRLSYRPNDPGLPFAISIRAGVGALGSPV 400
              P  +G  A G P           A+GP    +  P   G P A    AG  A G  +
Sbjct: 553 TVSPSDTGPPAVGPP-----------AAGPP---AAGPPAAGPPAAGPPAAGPPAAGPRI 598

Query: 401 CAPFS 415
            AP S
Sbjct: 599 LAPLS 603

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>DEND_MOUSE (Q80TS7) Dendrin|
          Length = 656

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
 Frame = -2

Query: 414 EKGAQTGEPRAPTPARMEMAKGRPGSL--GRYDKRRAGPEAKAVERSKRSSRGSPPAER- 244
           E+  Q G  RAP P+   + +G PG    G +  RR GP +       R S G+ P  R 
Sbjct: 112 ERFGQVG--RAPRPS--VLPQGDPGVAWAGPWGGRRPGPPSYEAHLLLRGSAGTAPRRRW 167

Query: 243 ---PDWNGSPS--TPIGTLARISGRSLSR 172
              P +   PS   P  TL    G  LSR
Sbjct: 168 DRPPPYVAPPSYEGPHRTLGTKRGPELSR 196


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,841,942
Number of Sequences: 219361
Number of extensions: 1078550
Number of successful extensions: 5520
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 5036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5497
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result