| Clone Name | baet15e11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X52472.1|TAPRP T.aestivum mRNA for a proline-rich protein Length = 1487 Score = 246 bits (124), Expect = 5e-62 Identities = 178/195 (91%), Gaps = 7/195 (3%) Strand = Plus / Plus Query: 66 gcggtgaagcacaa-gtgcagcaacagctgcgagaa------agcagcaatggcgaggca 118 |||||||||||||| ||||||||| ||||||||||| |||||||||||||||||| Sbjct: 47 gcggtgaagcacaaagtgcagcaagagctgcgagaaggagcgagcagcaatggcgaggca 106 Query: 119 cagcctccttgccgtgctcctcgtcgggctgctcgcggcctccggcttcagcctcgcggc 178 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 107 cagcctccttgccgtgctcctcgtcgggctggtcgcggcctccggcttcagccaggcggc 166 Query: 179 cgctgctggccggggcctcgtcgagaagctccccgagccggagcccaagcccacgccgta 238 ||| |||||||||||||| | ||||||||||||||||||||||||||||| |||||||| Sbjct: 167 cgccgctggccggggccttgctgagaagctccccgagccggagcccaagccgacgccgta 226 Query: 239 cccggagcccaagcc 253 ||| ||||||||||| Sbjct: 227 cccagagcccaagcc 241 Score = 178 bits (90), Expect = 1e-41 Identities = 174/202 (86%) Strand = Plus / Plus Query: 250 agcctatgcctaaacctgaacccatgccgaagccggagcccacacctatgcctaagcctg 309 |||| |||||||| |||||||||||||| ||||| ||||| | ||| ||||||| |||| Sbjct: 256 agccaatgcctaagcctgaacccatgccaaagccagagcctaagcctctgcctaaacctg 315 Query: 310 aacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatgccaaagccag 369 ||||||||||||| || ||||| || ||| |||| || |||||||||||||||||||||| Sbjct: 316 aacccatgccaaaaccagagcctaagcctctgcccaaacctgaacccatgccaaagccag 375 Query: 370 agcccaagccggaacccaagccggagccgatgccaaagccagagcctaagccagaaccca 429 ||||||| ||||| || |||||||||||||| |||||||| || || ||||| || |||| Sbjct: 376 agcccaaaccggagccgaagccggagccgatcccaaagcccgaaccaaagcctgagccca 435 Query: 430 agcccgagccgatgcctaaacc 451 |||| || |||||||| ||||| Sbjct: 436 agcctgacccgatgcccaaacc 457 Score = 149 bits (75), Expect = 9e-33 Identities = 180/215 (83%) Strand = Plus / Plus Query: 243 gagcccaagcctatgcctaaacctgaacccatgccgaagccggagcccacacctatgcct 302 ||||| |||||| |||||||||||||||||||||| || || ||||| | ||| |||| Sbjct: 291 gagcctaagcctctgcctaaacctgaacccatgccaaaaccagagcctaagcctctgccc 350 Query: 303 aagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatgcca 362 || |||||||||||||||||||| ||||||||||| ||| ||||| || || || ||| Sbjct: 351 aaacctgaacccatgccaaagccagagcccaaaccggagccgaagccggagccgatccca 410 Query: 363 aagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagcca 422 ||||| || || ||||| || |||||||| || |||||||| || || ||||||||||| Sbjct: 411 aagcccgaaccaaagcctgagcccaagcctgacccgatgcccaaacctgagcctaagcct 470 Query: 423 gaacccaagcccgagccgatgcctaaaccagaacc 457 || |||||||| ||||||||||| ||||| ||||| Sbjct: 471 gagcccaagccagagccgatgcccaaaccggaacc 505 Score = 117 bits (59), Expect = 3e-23 Identities = 176/215 (81%) Strand = Plus / Plus Query: 243 gagcccaagcctatgcctaaacctgaacccatgccgaagccggagcccacacctatgcct 302 ||||| |||||| |||| ||||||||||||||||| ||||| ||||||| ||| ||| Sbjct: 333 gagcctaagcctctgcccaaacctgaacccatgccaaagccagagcccaaaccggagccg 392 Query: 303 aagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatgcca 362 ||||| || || || |||||||| || || || ||| ||| |||||||| || ||||| Sbjct: 393 aagccggagccgatcccaaagcccgaaccaaagcctgagcccaagcctgacccgatgccc 452 Query: 363 aagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagcca 422 || || ||||| ||||| || |||||||| ||||||||||| || || || || |||||| Sbjct: 453 aaacctgagcctaagcctgagcccaagccagagccgatgcccaaaccggaaccaaagcca 512 Query: 423 gaacccaagcccgagccgatgcctaaaccagaacc 457 || |||||||||||||| ||||| ||||| ||||| Sbjct: 513 gagcccaagcccgagcctatgccaaaacctgaacc 547 Score = 105 bits (53), Expect = 1e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 345 aagcctgaacccatgccaaagccagagcccaagccggaacccaagccggagccgatgcca 404 |||||||| || |||||||| || || |||||||| || |||||||| |||||||||||| Sbjct: 729 aagcctgagccgatgccaaaaccggaacccaagcctgagcccaagcctgagccgatgcca 788 Query: 405 aagccagagcctaagccagaacccaagcccgagccgatgcctaaaccagaacc 457 || || ||||| ||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 789 aaaccggagcccaagcccgagcccaagcccgagccgatgccaaaaccggaacc 841 Score = 99.6 bits (50), Expect = 8e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaag 419 ||||||||||||||||| || || |||||||| ||||||||||||||||| || || ||| Sbjct: 966 ccaaagccagagcccaaacccgagcccaagccagagccgatgccaaagccggaaccaaag 1025 Query: 420 ccagaacccaagcccgagccgatgcctaaaccagaacc 457 || || |||||||||||||| ||||| || |||||||| Sbjct: 1026 cccgagcccaagcccgagccaatgccgaagccagaacc 1063 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 318 ccaaagccggagcccaaacctatgcctaagcctgaacccatgccaaagccagagcccaag 377 |||||||| ||||||||||| ||| ||||| || || ||||||||||| || || ||| Sbjct: 966 ccaaagccagagcccaaacccgagcccaagccagagccgatgccaaagccggaaccaaag 1025 Query: 378 ccggaacccaagccggagccgatgccaaagccagagcctaagccagaacccaagcccgag 437 || || |||||||| ||||| ||||| |||||||| || |||||||| |||||||| ||| Sbjct: 1026 cccgagcccaagcccgagccaatgccgaagccagaaccgaagccagagcccaagcctgag 1085 Query: 438 ccgatgcctaaaccaga 454 |||||||| || ||||| Sbjct: 1086 ccgatgccaaagccaga 1102 Score = 93.7 bits (47), Expect = 5e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 303 aagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatgcca 362 |||||||| || |||||||| ||||| ||||| ||| ||| |||||||| || |||||| Sbjct: 729 aagcctgagccgatgccaaaaccggaacccaagcctgagcccaagcctgagccgatgcca 788 Query: 363 aagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagcca 422 || || ||||||||||| || |||||||| |||||||||||||| || || || ||||| Sbjct: 789 aaaccggagcccaagcccgagcccaagcccgagccgatgccaaaaccggaaccaaagcct 848 Query: 423 gaacccaagcc 433 || |||||||| Sbjct: 849 gagcccaagcc 859 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 394 agccgatgccaaagccagagcctaagccagaacccaagcccgagccgatgcctaaaccag 453 ||||||||||||| || || || |||||||| |||||||||||||||||||||||||||| Sbjct: 589 agccgatgccaaaacccgaaccgaagccagagcccaagcccgagccgatgcctaaaccag 648 Query: 454 aacc 457 |||| Sbjct: 649 aacc 652 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 315 atgccaaagccggagcccaaacctatgcctaagcctgaacccatgccaaagccagagccc 374 |||||||||||||| || || || ||| ||||| || || ||||| |||||||| || Sbjct: 1005 atgccaaagccggaaccaaagcccgagcccaagcccgagccaatgccgaagccagaaccg 1064 Query: 375 aagccggaacccaagccggagccgatgccaaagccagagcctaagcc 421 ||||| || |||||||| ||||||||||||||||||||||||||||| Sbjct: 1065 aagccagagcccaagcctgagccgatgccaaagccagagcctaagcc 1111 Score = 85.7 bits (43), Expect = 1e-13 Identities = 127/155 (81%) Strand = Plus / Plus Query: 303 aagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatgcca 362 |||||||| || |||||||| ||||||||||| || ||| ||||| || || |||||| Sbjct: 771 aagcctgagccgatgccaaaaccggagcccaagcccgagcccaagcccgagccgatgcca 830 Query: 363 aagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagcca 422 || || || || ||||| || |||||||| | || ||||| || || ||||||||||| Sbjct: 831 aaaccggaaccaaagcctgagcccaagccttacccaatgcccaaacctgagcctaagcct 890 Query: 423 gaacccaagcccgagccgatgcctaaaccagaacc 457 || ||||| |||||||||||||| ||||||||||| Sbjct: 891 gagcccaaacccgagccgatgcccaaaccagaacc 925 Score = 75.8 bits (38), Expect = 1e-10 Identities = 164/206 (79%) Strand = Plus / Plus Query: 240 ccggagcccaagcctatgcctaaacctgaacccatgccgaagccggagcccacacctatg 299 ||||| ||||||||| ||| || ||||| || ||||| || |||||||||| || | Sbjct: 750 ccggaacccaagcctgagcccaagcctgagccgatgccaaaaccggagcccaagcccgag 809 Query: 300 cctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatg 359 || ||||| || || |||||||| ||||| || || ||| ||| |||||| | || ||| Sbjct: 810 cccaagcccgagccgatgccaaaaccggaaccaaagcctgagcccaagccttacccaatg 869 Query: 360 ccaaagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaag 419 || || || ||||| ||||| || ||||| || ||||||||||| || ||||| || ||| Sbjct: 870 cccaaacctgagcctaagcctgagcccaaacccgagccgatgcccaaaccagaaccaaag 929 Query: 420 ccagaacccaagcccgagccgatgcc 445 ||||| ||||| |||||||||||||| Sbjct: 930 ccagagcccaaacccgagccgatgcc 955 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 357 atgccaaagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcct 416 |||||||| || || || ||||| || |||||||| ||||||||||| || ||||| || Sbjct: 594 atgccaaaacccgaaccgaagccagagcccaagcccgagccgatgcctaaaccagaacca 653 Query: 417 aagccagaacccaagcccgagccgat 442 |||||||| ||||| ||||||||||| Sbjct: 654 aagccagagcccaaacccgagccgat 679 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 375 aagccggaacccaagccggagccgatgccaaagccagagcctaagccagaacccaagccc 434 ||||| || |||||||| |||||||||||||| || || || ||||| || |||||||| Sbjct: 717 aagccagagcccaagcctgagccgatgccaaaaccggaacccaagcctgagcccaagcct 776 Query: 435 gagccgatgcctaaacc 451 ||||||||||| ||||| Sbjct: 777 gagccgatgccaaaacc 793 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 394 agccgatgccaaagccagagcctaagccagaacccaagcccgagccgatgcctaaaccag 453 |||||||||| || || || ||||||||||| |||||||| ||||||||||| ||||| | Sbjct: 694 agccgatgccgaaacccgaacctaagccagagcccaagcctgagccgatgccaaaaccgg 753 Query: 454 aacc 457 |||| Sbjct: 754 aacc 757 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 341 gcctaagcctgaacccatgccaaagccagagcccaagcc 379 ||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1133 gcctaagcctgaacctatgcctaagccagagcccaagcc 1171 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 357 atgccaaagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcct 416 ||||| || ||||| || ||||| || ||||| || ||||||||||||||||| || || Sbjct: 909 atgcccaaaccagaaccaaagccagagcccaaacccgagccgatgccaaagccggaacca 968 Query: 417 aagccagaacccaagcccgagcc 439 |||||||| ||||| |||||||| Sbjct: 969 aagccagagcccaaacccgagcc 991 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 366 ccagagcccaagccggaacccaagccggagccgatgccaaagcc 409 ||||||||||||||| |||||||||| ||||| ||||| ||||| Sbjct: 228 ccagagcccaagccgcaacccaagccagagccaatgcctaagcc 271 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 375 aagccggaacccaagccggagccgatgccaaagccagagcctaagccagaacccaagccc 434 ||||| || |||||||| ||||| |||||||| || || || ||||| || ||||| ||| Sbjct: 507 aagccagagcccaagcccgagcctatgccaaaacctgaaccaaagcccgagcccaaaccc 566 Query: 435 gagccgatg 443 ||||||||| Sbjct: 567 gagccgatg 575 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 299 gcctaagcctgaacccatgccaaagccggagcccaa 334 ||||||||||||||| ||||| ||||| |||||||| Sbjct: 1133 gcctaagcctgaacctatgcctaagccagagcccaa 1168
>emb|AJ234401.1|HVU234401 Hordeum vulgare partial mRNA; clone cMWG0646 Length = 694 Score = 137 bits (69), Expect = 4e-29 Identities = 72/73 (98%) Strand = Plus / Plus Query: 385 ccaagccggagccgatgccaaagccagagcctaagccagaacccaagcccgagccgatgc 444 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99 ccaagccggagccgatgccaaagcccgagcctaagccagaacccaagcccgagccgatgc 158 Query: 445 ctaaaccagaacc 457 ||||||||||||| Sbjct: 159 ctaaaccagaacc 171 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 357 atgccaaagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcct 416 |||||||| || || || ||||| || || ||||| |||||||||||||| || || || Sbjct: 289 atgccaaaacccgaaccaaagccagagcctaagcccgagccgatgccaaaacccgaacca 348 Query: 417 aagccagaacccaagcccgagccgatgcctaaaccagaacc 457 |||||||| |||||||||||||||||||| ||||| ||||| Sbjct: 349 aagccagagcccaagcccgagccgatgccgaaacccgaacc 389 Score = 73.8 bits (37), Expect = 4e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 345 aagcctgaacccatgccaaagccagagcccaagccggaacccaagccggagccgatgcca 404 |||||| | |||||||| || || ||||| ||||| || ||||| || |||||||||||| Sbjct: 403 aagccttaccccatgcccaaacctgagcctaagcctgagcccaaaccagagccgatgcca 462 Query: 405 aagccagagcctaagccagaacccaagcccgagccgatgcctaaaccagaacc 457 || || || || |||||||| ||||| || ||||||||||| ||||| ||||| Sbjct: 463 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaacc 515 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 385 ccaagccggagccgatgccaaagccagagcctaagccagaacccaagcccgagccgatgc 444 ||||||| |||||||||||||| || || || |||||||| || |||||||||||||||| Sbjct: 275 ccaagcccgagccgatgccaaaacccgaaccaaagccagagcctaagcccgagccgatgc 334 Query: 445 ctaaaccagaacc 457 | ||||| ||||| Sbjct: 335 caaaacccgaacc 347 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 357 atgccaaagccagagcccaagccggaacccaagccggagccgatgccaaagccaga 412 ||||||||||| ||||| ||||| ||||||||||| ||||||||||| || ||||| Sbjct: 113 atgccaaagcccgagcctaagccagaacccaagcccgagccgatgcctaaaccaga 168 Score = 61.9 bits (31), Expect = 2e-06 Identities = 38/41 (92%) Strand = Plus / Plus Query: 381 gaacccaagccggagccgatgccaaagccagagcctaagcc 421 || |||||||| ||||||||||||||||| ||||||||||| Sbjct: 617 gamcccaagccagagccgatgccaaagccggagcctaagcc 657 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 357 atgccaaagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcct 416 |||||||| || || || ||||| || ||||| || |||||||||||||| || || || Sbjct: 457 atgccaaaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaacca 516 Query: 417 aagccagaacccaagcccgagccgatg 443 |||||||| ||||| |||||||||||| Sbjct: 517 aagccagagcccaaacccgagccgatg 543 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 396 ccgatgccaaagccagagcctaagccagaacccaagcccgagccgatgcctaaacc 451 ||||||||||| || || || |||||||| |||||||||||||||| ||| ||||| Sbjct: 559 ccgatgccaaaacccgaaccgaagccagagcccaagcccgagccgaggccaaaacc 614 Score = 50.1 bits (25), Expect = 0.006 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 348 cctgaacccatgccaaagccagagcccaagccggaacccaagccggagccga-tgccaaa 406 ||||| |||| |||| |||| ||| |||||||| || ||||| ||||||| ||||||| Sbjct: 614 cctgamcccaagccagagccgatgccaaagccggagcctaagcccgagccgaatgccaaa 673 Query: 407 gccagagcctaagcc 421 ||||||||| ||||| Sbjct: 674 gccagagcccaagcc 688 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 341 gcctaagcctgaacccatgccaaagccagagcccaagccggaacccaagccggagccgat 400 ||||||||| || || |||||||| || || || ||||| || |||||||| |||||||| Sbjct: 315 gcctaagcccgagccgatgccaaaacccgaaccaaagccagagcccaagcccgagccgat 374 Query: 401 gccaaagccagagcctaagccagaacccaagcc 433 ||| || || || || ||||| || |||||||| Sbjct: 375 gccgaaacccgaaccgaagcctgagcccaagcc 407 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 413 gcctaagccagaacccaagcccgagccgatgcctaaaccagaacc 457 |||||| |||||||| || || ||||| ||||||||||||||||| Sbjct: 157 gcctaaaccagaaccgaaacctgagcctatgcctaaaccagaacc 201
>emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 1/8 Length = 348517 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 366 ccagagcccaagccggaacccaagccggagcc 397 |||||||||||||||||||||||||| ||||| Sbjct: 222983 ccagagcccaagccggaacccaagcccgagcc 223014 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagccg 398 ||||| ||||||||||||||||| || ||||||||| Sbjct: 223004 aagcccgagcccaagccggaaccaaaaccggagccg 223039 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 408 ccagagcctaagccagaacccaagcccgagcc 439 |||||||| ||||| ||||||||||||||||| Sbjct: 222983 ccagagcccaagccggaacccaagcccgagcc 223014
>ref|NM_194867.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.15), mRNA Length = 690 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 |||||||||||||||||||| |||||||| ||||| Sbjct: 601 aagccagagcccaagccggagcccaagccagagcc 635
>gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, complete sequence Length = 134553 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 |||||||||||||||||||| |||||||| ||||| Sbjct: 99822 aagccagagcccaagccggagcccaagccagagcc 99856 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 ||||||||||||||||| || ||||||||| |||| Sbjct: 89161 aagccagagcccaagccagagcccaagccgcagcc 89195 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagcc 439 ||||||||||| |||||||| |||||||| ||||| Sbjct: 89149 aagccagagccgaagccagagcccaagccagagcc 89183 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcc 433 ||||||||||| |||||||| |||||||| Sbjct: 89161 aagccagagcccaagccagagcccaagcc 89189
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 |||||||||||||||||||| |||||||| ||||| Sbjct: 3011400 aagccagagcccaagccggagcccaagccagagcc 3011434 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 ||||||||||||||||| || ||||||||| |||| Sbjct: 3000739 aagccagagcccaagccagagcccaagccgcagcc 3000773 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagcc 439 ||||||||||| |||||||| |||||||| ||||| Sbjct: 3000727 aagccagagccgaagccagagcccaagccagagcc 3000761 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcc 433 ||||||||||| |||||||| |||||||| Sbjct: 3000739 aagccagagcccaagccagagcccaagcc 3000767
>dbj|AK062795.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-C07, full insert sequence Length = 862 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 |||||||||||||||||||| |||||||| ||||| Sbjct: 644 aagccagagcccaagccggagcccaagccagagcc 678
>dbj|AK061299.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E05, full insert sequence Length = 928 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 |||||||||||||||||||| |||||||| ||||| Sbjct: 658 aagccagagcccaagccggagcccaagccagagcc 692
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 |||||||||||||||||||| |||||||| ||||| Sbjct: 3011321 aagccagagcccaagccggagcccaagccagagcc 3011355 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 ||||||||||||||||| || ||||||||| |||| Sbjct: 3000660 aagccagagcccaagccagagcccaagccgcagcc 3000694 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagcc 439 ||||||||||| |||||||| |||||||| ||||| Sbjct: 3000648 aagccagagccgaagccagagcccaagccagagcc 3000682 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcc 433 ||||||||||| |||||||| |||||||| Sbjct: 3000660 aagccagagcccaagccagagcccaagcc 3000688
>gb|AF377565.1| Tripsacum dactyloides clone T. anonymous genomic RFLP marker Csu1138 Length = 369 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 370 agcccaagccggaacccaagccggagccgatgccaaagccagagcc 415 |||||||||| || |||||||||||||| | ||| ||||||||||| Sbjct: 93 agcccaagccagagcccaagccggagcccaagcccaagccagagcc 138 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagcc 391 |||||||||||||||||||| |||||||| Sbjct: 98 aagccagagcccaagccggagcccaagcc 126 Score = 40.1 bits (20), Expect = 6.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 396 ccgatgccaaagccagagcctaagccagaacccaagcccgagcc 439 |||| ||| ||||||||||| ||||| || ||||||||| |||| Sbjct: 89 ccgaagcccaagccagagcccaagccggagcccaagcccaagcc 132
>gb|AF198109.1|AF198109 Trichomonas vaginalis eukaryotic release factor 3 GTPase subunit (erf3) gene, complete cds Length = 2242 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 402 ccaaagccagagcctaagccagaacccaagcccgagcc 439 ||||| |||||||| ||||||||||||||||| ||||| Sbjct: 494 ccaaaaccagagccaaagccagaacccaagcctgagcc 531 Score = 46.1 bits (23), Expect = 0.100 Identities = 35/39 (89%) Strand = Plus / Plus Query: 359 gccaaagccagagcccaagccggaacccaagccggagcc 397 |||||| |||||||||||||| ||||| ||||| ||||| Sbjct: 565 gccaaaaccagagcccaagccagaaccaaagccagagcc 603 Score = 46.1 bits (23), Expect = 0.100 Identities = 35/39 (89%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacccaagcccgagcc 439 |||||| |||||||| ||||||||||| ||||| ||||| Sbjct: 565 gccaaaaccagagcccaagccagaaccaaagccagagcc 603 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagccggaacccaagccggagcc 397 ||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 494 ccaaaaccagagccaaagccagaacccaagcctgagcc 531
>emb|Y17332.1|ZMPROPR Zea mays mRNA for proline-rich protein Length = 1471 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 402 ccaaagccagagcctaagccagaacc 427 |||||||||||||||||||||||||| Sbjct: 886 ccaaagccagagcctaagccagaacc 911 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacc 427 ||||||||||||||||||||| ||||| Sbjct: 921 gccaaagccagagcctaagcccgaacc 947 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacc 427 ||||||||||||||||||||| ||||| Sbjct: 753 gccaaagccagagcctaagcccgaacc 779 Score = 46.1 bits (23), Expect = 0.100 Identities = 65/79 (82%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagcca 422 ||||||||||| || || ||||| || |||||||| | |||| |||| | ||||||||| Sbjct: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagcca 672 Query: 423 gaacccaagcccgagccga 441 || || ||||| ||||||| Sbjct: 673 gagcctaagcctgagccga 691 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 402 ccaaagccagagcctaagccagaacccaagcccgagccgatgcctaaaccaga 454 |||| |||||| ||||||||||| || ||||| ||||||| || |||||||| Sbjct: 814 ccaaggccagaacctaagccagagccaaagcctgagccgaaaccgaaaccaga 866 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 ccaaagccagagcctaagcc 421 |||||||||||||||||||| Sbjct: 1054 ccaaagccagagcctaagcc 1073 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 402 ccaaagccagagcctaagccagaacccaagcccgagccga 441 ||||| ||||||||||||||||| || || ||||| |||| Sbjct: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
>emb|AJ130830.1|ZMA130830 Zea mays gene encoding putative cell wall protein Length = 1792 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 402 ccaaagccagagcctaagccagaacc 427 |||||||||||||||||||||||||| Sbjct: 866 ccaaagccagagcctaagccagaacc 891 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacc 427 ||||||||||||||||||||| ||||| Sbjct: 901 gccaaagccagagcctaagcccgaacc 927 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacc 427 ||||||||||||||||||||| ||||| Sbjct: 733 gccaaagccagagcctaagcccgaacc 759 Score = 46.1 bits (23), Expect = 0.100 Identities = 65/79 (82%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagcca 422 ||||||||||| || || ||||| || |||||||| | |||| |||| | ||||||||| Sbjct: 593 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagcca 652 Query: 423 gaacccaagcccgagccga 441 || || ||||| ||||||| Sbjct: 653 gagcctaagcctgagccga 671 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 402 ccaaagccagagcctaagccagaacccaagcccgagccgatgcctaaaccaga 454 |||| |||||| ||||||||||| || ||||| ||||||| || |||||||| Sbjct: 794 ccaaggccagaacctaagccagagccaaagcctgagccgaaaccgaaaccaga 846 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 ccaaagccagagcctaagcc 421 |||||||||||||||||||| Sbjct: 1034 ccaaagccagagcctaagcc 1053 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 402 ccaaagccagagcctaagccagaacccaagcccgagccga 441 ||||| ||||||||||||||||| || || ||||| |||| Sbjct: 578 ccaaaaccagagcctaagccagagcctaaacccgaaccga 617
>gb|AF026211.2| Caenorhabditis elegans cosmid T13B5, complete sequence Length = 31469 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 328 agcccaaacctatgcctaagcctgaacccatgccaaagcca 368 |||| ||||||| |||||||||||| || |||||||||||| Sbjct: 12945 agcctaaacctaggcctaagcctgagcctatgccaaagcca 12985 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 293 acctatgcctaagcctgaacccatgccaaagcc 325 ||||| |||||||||||| || ||||||||||| Sbjct: 12952 acctaggcctaagcctgagcctatgccaaagcc 12984
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 354 cccatgccaaagccagagcccaagccggaacccaagccggagccg 398 ||||| || ||||| ||||||||||| || ||||||||||||||| Sbjct: 3480530 cccattcccaagcccgagcccaagcccgagcccaagccggagccg 3480486 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 ||||| |||||||||||||| || ||||||||||| Sbjct: 4454379 aagccggagcccaagccggagcctaagccggagcc 4454345 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 372 cccaagccggaacccaagccggagcc 397 |||||||||||||| ||||||||||| Sbjct: 4454394 cccaagccggaacctaagccggagcc 4454369 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 gccgctgctggccggggcctc 197 ||||||||||||||||||||| Sbjct: 2780694 gccgctgctggccggggcctc 2780674
>ref|NM_061512.1| Caenorhabditis elegans COLlagen family member (col-40) (col-40) mRNA, complete cds Length = 1251 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 328 agcccaaacctatgcctaagcctgaacccatgccaaagcca 368 |||| ||||||| |||||||||||| || |||||||||||| Sbjct: 1078 agcctaaacctaggcctaagcctgagcctatgccaaagcca 1038 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 293 acctatgcctaagcctgaacccatgccaaagcc 325 ||||| |||||||||||| || ||||||||||| Sbjct: 1071 acctaggcctaagcctgagcctatgccaaagcc 1039
>ref|NM_017369.1| Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit epsilon (Gabre), mRNA Length = 2779 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 346 agcctgaacccatgccaaagccagagcccaagccggaacccaagccggagcc 397 |||| ||||||| ||| |||| |||||| |||| ||||||||||||||||| Sbjct: 952 agccagaacccaagccggagcctgagccccagccagaacccaagccggagcc 1003 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||||||||||| ||| |||||||||| Sbjct: 1054 agcccgagcccaagccggagccccagccggagcc 1087 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||| |||| ||||||||||||||||| Sbjct: 940 agcctgagccccagccagaacccaagccggagcc 973
>gb|AF067947.2| Caenorhabditis elegans cosmid T10B5, complete sequence Length = 40837 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 317 gccaaagccggagcccaaacctatgcctaagcctga 352 |||||||||| |||| || ||||||||||||||||| Sbjct: 21570 gccaaagccgaagccgaagcctatgcctaagcctga 21535
>gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_C10, complete sequence Length = 138209 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Minus Query: 369 gagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagccaga 424 ||||| ||||| ||||| ||||||||||| | |||| | |||||||| |||||||| Sbjct: 58868 gagccaaagccagaacctaagccggagccaaagccatacccagagccgaagccaga 58813 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 agccggagccgatgccaaagccagagcct 416 |||||||||||| |||||||||| ||||| Sbjct: 84007 agccggagccgaagccaaagccaaagcct 83979 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 375 aagccggaacccaagccggagccgatgccaaagccagagcc 415 ||||||||||| || |||||||| | |||||||||||||| Sbjct: 83720 aagccggaaccaaaaccggagcccaaaccaaagccagagcc 83680 Score = 40.1 bits (20), Expect = 6.2 Identities = 65/80 (81%) Strand = Plus / Minus Query: 318 ccaaagccggagcccaaacctatgcctaagcctgaacccatgccaaagccagagcccaag 377 |||||||| || || |||||| ||||||||||||||| | ||| | |||||||| || Sbjct: 83897 ccaaagccagaaccaaaacctgagcctaagcctgaacctaaaccatacccagagccaaaa 83838 Query: 378 ccggaacccaagccggagcc 397 ||||| || ||||| ||||| Sbjct: 83837 ccggagccgaagccagagcc 83818 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 363 aagccagagcccaagccggaacccaagccgga 394 ||||||||||| || |||||||| |||||||| Sbjct: 83744 aagccagagccaaaaccggaaccgaagccgga 83713 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 83129 ccaaagccagagcccaagcc 83110 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 gccaaagccggagcccaaacctatgcctaagcctga 352 ||||||||| || || ||||||| |||||||||||| Sbjct: 83022 gccaaagcctgaaccgaaacctaagcctaagcctga 82987 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 ccaaagccggagcccaaacc 337 |||||||||||||||||||| Sbjct: 58499 ccaaagccggagcccaaacc 58480
>gb|AF131866.2| Mus musculus chromosome X clone CT7-271B7 map qA7.1, complete sequence Length = 110310 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 346 agcctgaacccatgccaaagccagagcccaagccggaacccaagccggagcc 397 |||| ||||||| ||| |||| |||||| |||| ||||||||||||||||| Sbjct: 17651 agccagaacccaagccggagcctgagccccagccagaacccaagccggagcc 17600 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||| |||| ||||||||||||||||| Sbjct: 17735 agccggagccccagccagaacccaagccggagcc 17702 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||| |||| ||||||||||||||||| Sbjct: 17663 agcctgagccccagccagaacccaagccggagcc 17630 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||||||||||| ||| |||||||||| Sbjct: 17549 agcccgagcccaagccggagccccagccggagcc 17516
>gb|AC124212.2| Mus musculus chromosome X clone CT7-532E7 map qA7.1, complete sequence Length = 109783 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 346 agcctgaacccatgccaaagccagagcccaagccggaacccaagccggagcc 397 |||| ||||||| ||| |||| |||||| |||| ||||||||||||||||| Sbjct: 101612 agccagaacccaagccggagcctgagccccagccagaacccaagccggagcc 101561 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||| |||| ||||||||||||||||| Sbjct: 101696 agccggagccccagccagaacccaagccggagcc 101663 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||| |||| ||||||||||||||||| Sbjct: 101624 agcctgagccccagccagaacccaagccggagcc 101591 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||||||||||| ||| |||||||||| Sbjct: 101510 agcccgagcccaagccggagccccagccggagcc 101477
>gb|AF519473.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete cds Length = 1108 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 402 ccaaagccagagcctaagccagaacccaagcccgagccgatgcctaaaccagaacc 457 ||||| ||||| |||||||||||||| || || ||||| | |||||| |||||||| Sbjct: 818 ccaaaaccagaacctaagccagaaccaaaacctgagcctaagcctaagccagaacc 873
>gb|AF331853.1| Saccharum hybrid cultivar CP72-2086 proline-rich protein mRNA, partial sequence Length = 1173 Score = 48.1 bits (24), Expect = 0.025 Identities = 63/76 (82%) Strand = Plus / Plus Query: 358 tgccaaagccagagcccaagccggaacccaagccggagccgatgccaaagccagagccta 417 |||| ||||| ||||| ||||| ||||| || || || || |||| || |||||||||| Sbjct: 381 tgccgaagcctgagcctaagccagaaccaaaacccgaaccattgccgaaaccagagccta 440 Query: 418 agccagaacccaagcc 433 |||| ||||||||||| Sbjct: 441 agcctgaacccaagcc 456 Score = 46.1 bits (23), Expect = 0.100 Identities = 59/71 (83%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagcca 422 ||||| || |||||||||||||| || || || || |||| || |||||||||||||| Sbjct: 440 aagcctgaacccaagccggaaccaaaacctgaaccactgccgaaaccagagcctaagcct 499 Query: 423 gaacccaagcc 433 || |||||||| Sbjct: 500 gagcccaagcc 510 Score = 46.1 bits (23), Expect = 0.100 Identities = 47/55 (85%) Strand = Plus / Plus Query: 400 tgccaaagccagagcctaagccagaacccaagcccgagccgatgcctaaaccaga 454 |||| ||||| ||||||||||||||||| || ||||| || |||| |||||||| Sbjct: 381 tgccgaagcctgagcctaagccagaaccaaaacccgaaccattgccgaaaccaga 435 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 345 aagcctgaacccatgccaaagccagagcccaagccggaacccaagccggagcc 397 ||||||||||||| || || |||||||| ||||| ||||| || |||||||| Sbjct: 704 aagcctgaacccaaacccaaaccagagccaaagcctgaaccaaaaccggagcc 756 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 366 ccagagcccaagccggaacccaagccgga 394 |||||||| ||||| |||||||||||||| Sbjct: 431 ccagagcctaagcctgaacccaagccgga 459 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 408 ccagagcctaagccagaacccaagcccgagcc 439 |||||||||||||| ||||| ||||| ||||| Sbjct: 803 ccagagcctaagcctgaaccgaagccagagcc 834 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccga 436 ||||| ||||||||||||||||| || ||||| Sbjct: 548 aagcctgagcctaagccagaaccaaaacccga 579 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 402 ccaaagccagagcctaagccagaacccaagcc 433 ||||| |||||||||||||| || |||||||| Sbjct: 197 ccaaaaccagagcctaagcctgagcccaagcc 228
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Minus Query: 369 gagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagccaga 424 ||||| ||||| ||||| ||||||||||| | |||| | |||||||| |||||||| Sbjct: 7622473 gagccaaagccagaacctaagccggagccaaagccatacccagagccgaagccaga 7622418 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 agccggagccgatgccaaagccagagcct 416 |||||||||||| |||||||||| ||||| Sbjct: 7647612 agccggagccgaagccaaagccaaagcct 7647584 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 375 aagccggaacccaagccggagccgatgccaaagccagagcc 415 ||||||||||| || |||||||| | |||||||||||||| Sbjct: 7647325 aagccggaaccaaaaccggagcccaaaccaaagccagagcc 7647285 Score = 40.1 bits (20), Expect = 6.2 Identities = 65/80 (81%) Strand = Plus / Minus Query: 318 ccaaagccggagcccaaacctatgcctaagcctgaacccatgccaaagccagagcccaag 377 |||||||| || || |||||| ||||||||||||||| | ||| | |||||||| || Sbjct: 7647502 ccaaagccagaaccaaaacctgagcctaagcctgaacctaaaccatacccagagccaaaa 7647443 Query: 378 ccggaacccaagccggagcc 397 ||||| || ||||| ||||| Sbjct: 7647442 ccggagccgaagccagagcc 7647423 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 363 aagccagagcccaagccggaacccaagccgga 394 ||||||||||| || |||||||| |||||||| Sbjct: 7647349 aagccagagccaaaaccggaaccgaagccgga 7647318 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 7646734 ccaaagccagagcccaagcc 7646715 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 gccaaagccggagcccaaacctatgcctaagcctga 352 ||||||||| || || ||||||| |||||||||||| Sbjct: 7646627 gccaaagcctgaaccgaaacctaagcctaagcctga 7646592 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 ccaaagccggagcccaaacc 337 |||||||||||||||||||| Sbjct: 7622104 ccaaagccggagcccaaacc 7622085
>gb|AF189265.1|AF189264S2 Mus musculus GABA-A receptor epsilon-like subunit (Epsilon) gene, exons 2 and 3 Length = 1935 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 346 agcctgaacccatgccaaagccagagcccaagccggaacccaagccggagcc 397 |||| ||||||| ||| |||| |||||| |||| ||||||||||||||||| Sbjct: 896 agccagaacccaagccggagcctgagccccagccagaacccaagccggagcc 947 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||||||||||| ||| |||||||||| Sbjct: 998 agcccgagcccaagccggagccccagccggagcc 1031 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||| |||| ||||||||||||||||| Sbjct: 884 agcctgagccccagccagaacccaagccggagcc 917
>gb|AF189263.1|AF189263 Mus musculus GABA-A receptor epsilon-like subunit (Epsilon) mRNA, complete cds Length = 2773 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 346 agcctgaacccatgccaaagccagagcccaagccggaacccaagccggagcc 397 |||| ||||||| ||| |||| |||||| |||| ||||||||||||||||| Sbjct: 952 agccagaacccaagccggagcctgagccccagccagaacccaagccggagcc 1003 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||||||||||| ||| |||||||||| Sbjct: 1054 agcccgagcccaagccggagccccagccggagcc 1087 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||| |||| ||||||||||||||||| Sbjct: 940 agcctgagccccagccagaacccaagccggagcc 973 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||| |||| ||||||||||||||||| Sbjct: 868 agccggagccccagccagaacccaagccggagcc 901
>dbj|AK100217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045I16, full insert sequence Length = 1510 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 369 gagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagccaga 424 ||||| ||||| ||||| ||||||||||| | |||| | |||||||| |||||||| Sbjct: 311 gagccaaagccagaacctaagccggagccaaagccatacccagagccgaagccaga 366 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 ccaaagccggagcccaaacc 337 |||||||||||||||||||| Sbjct: 680 ccaaagccggagcccaaacc 699
>gb|AF337054.1| Oryza sativa repetitive proline rich protein mRNA, complete cds Length = 1493 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 369 gagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagccaga 424 ||||| ||||| ||||| ||||||||||| | |||| | |||||||| |||||||| Sbjct: 280 gagccaaagccagaacctaagccggagccaaagccatacccagagccgaagccaga 335 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 ccaaagccggagcccaaacc 337 |||||||||||||||||||| Sbjct: 649 ccaaagccggagcccaaacc 668
>gb|AY833420.1| Desulfovibrio gigas chemotaxis operon, complete sequence Length = 11022 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 371 gcccaagccggaacccaagccgga 394 |||||||||||||||||||||||| Sbjct: 8619 gcccaagccggaacccaagccgga 8642
>emb|AL807816.7| Mouse DNA sequence from clone RP23-13H12 on chromosome X, complete sequence Length = 193219 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 346 agcctgaacccatgccaaagccagagcccaagccggaacccaagccggagcc 397 |||| ||||||| ||| |||| |||||| |||| ||||||||||||||||| Sbjct: 36902 agccagaacccaagccggagcctgagccccagccagaacccaagccggagcc 36851 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||| |||| ||||||||||||||||| Sbjct: 36998 agccggagccccagccagaacccaagccggagcc 36965 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||| |||| ||||||||||||||||| Sbjct: 36914 agcctgagccccagccagaacccaagccggagcc 36881 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||||||||||| ||| |||||||||| Sbjct: 36794 agcccgagcccaagccggagccccagccggagcc 36761
>ref|NM_194866.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.14), mRNA Length = 690 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 ||||||||||||||||| || ||||||||| |||| Sbjct: 613 aagccagagcccaagccagagcccaagccgcagcc 647 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagcc 439 ||||||||||| |||||||| |||||||| ||||| Sbjct: 601 aagccagagccgaagccagagcccaagccagagcc 635 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcc 433 ||||||||||| |||||||| |||||||| Sbjct: 613 aagccagagcccaagccagagcccaagcc 641
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Plus Query: 370 agcccaagccggaacccaagccg 392 ||||||||||||||||||||||| Sbjct: 1086912 agcccaagccggaacccaagccg 1086934
>gb|AF519490.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete cds Length = 1138 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagcc 439 ||||| ||||||||||||||||| ||||| ||||| Sbjct: 857 aagcctgagcctaagccagaacctaagcctgagcc 891
>gb|AF519487.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete cds Length = 1099 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacc 427 |||||| |||||||||||||||||||| Sbjct: 814 gccaaaaccagagcctaagccagaacc 840 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 ccagagcctaagccagaacc 427 |||||||||||||||||||| Sbjct: 773 ccagagcctaagccagaacc 792
>gb|AF519480.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete cds Length = 1162 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagcc 439 ||||| ||||||||||||||||| ||||| ||||| Sbjct: 881 aagcctgagcctaagccagaacctaagcctgagcc 915
>gb|AF519478.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete cds Length = 1114 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacc 427 ||||||||||||||||||||||| Sbjct: 857 aagccagagcctaagccagaacc 879
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagccggaacccaagccgga 394 |||||||||||||| || ||||||||||| ||||| Sbjct: 3410874 ccaaagccagagcctaaaccggaacccaaaccgga 3410840 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 402 ccaaagccagagcctaagccagaacccaa 430 ||||||||||||||||| || |||||||| Sbjct: 3410874 ccaaagccagagcctaaaccggaacccaa 3410846
>dbj|AK079258.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530062C16 product:GABA-A RECEPTOR EPSILON-LIKE SUBUNIT homolog [Mus musculus], full insert sequence Length = 1939 Score = 46.1 bits (23), Expect = 0.100 Identities = 41/47 (87%) Strand = Plus / Plus Query: 351 gaacccatgccaaagccagagcccaagccggaacccaagccggagcc 397 ||||||| ||| |||| |||||| |||| ||||||||||||||||| Sbjct: 1038 gaacccaagccggagcctgagccccagccagaacccaagccggagcc 1084 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||||||||||| ||| |||||||||| Sbjct: 1141 agcccgagcccaagccggagccccagccggagcc 1174 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 364 agccagagcccaagccggaacccaagccggagcc 397 |||| |||||| |||| ||||||||||||||||| Sbjct: 939 agccggagccccagccagaacccaagccggagcc 972
>gb|AF221552.1|AF221552 Oryza sativa proline-rich protein RiP-15 mRNA, partial cds Length = 525 Score = 46.1 bits (23), Expect = 0.100 Identities = 44/51 (86%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacccaagcccgagccgatgcctaaacc 451 |||||| || ||||| |||||||||||||| || |||||| ||||||||| Sbjct: 332 gccaaaaccggagccaaagccagaacccaaacctgagccggagcctaaacc 382 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 388 agccggagccgatgccaaagccagagcct 416 |||||||||||| |||||||||| ||||| Sbjct: 145 agccggagccgaagccaaagccaaagcct 173
>dbj|AK104765.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H08, full insert sequence Length = 1080 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 ||||||||||||||||| || ||||||||| |||| Sbjct: 673 aagccagagcccaagccagagcccaagccgcagcc 707 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagcc 439 ||||||||||| |||||||| |||||||| ||||| Sbjct: 661 aagccagagccgaagccagagcccaagccagagcc 695 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcc 433 ||||||||||| |||||||| |||||||| Sbjct: 673 aagccagagcccaagccagagcccaagcc 701
>dbj|AK104622.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H10, full insert sequence Length = 1032 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 ||||||||||||||||| || ||||||||| |||| Sbjct: 673 aagccagagcccaagccagagcccaagccgcagcc 707 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagcc 439 ||||||||||| |||||||| |||||||| ||||| Sbjct: 661 aagccagagccgaagccagagcccaagccagagcc 695 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcc 433 ||||||||||| |||||||| |||||||| Sbjct: 673 aagccagagcccaagccagagcccaagcc 701
>dbj|AK104398.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D05, full insert sequence Length = 1032 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 ||||||||||||||||| || ||||||||| |||| Sbjct: 673 aagccagagcccaagccagagcccaagccgcagcc 707 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagcc 439 ||||||||||| |||||||| |||||||| ||||| Sbjct: 661 aagccagagccgaagccagagcccaagccagagcc 695 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcc 433 ||||||||||| |||||||| |||||||| Sbjct: 673 aagccagagcccaagccagagcccaagcc 701
>dbj|AK104262.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C07, full insert sequence Length = 1030 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 ||||||||||||||||| || ||||||||| |||| Sbjct: 673 aagccagagcccaagccagagcccaagccgcagcc 707 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagcc 439 ||||||||||| |||||||| |||||||| ||||| Sbjct: 661 aagccagagccgaagccagagcccaagccagagcc 695 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcc 433 ||||||||||| |||||||| |||||||| Sbjct: 673 aagccagagcccaagccagagcccaagcc 701
>dbj|AK104235.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-F12, full insert sequence Length = 972 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 ||||||||||||||||| || ||||||||| |||| Sbjct: 676 aagccagagcccaagccagagcccaagccgcagcc 710 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagcc 439 ||||||||||| |||||||| |||||||| ||||| Sbjct: 664 aagccagagccgaagccagagcccaagccagagcc 698 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcc 433 ||||||||||| |||||||| |||||||| Sbjct: 676 aagccagagcccaagccagagcccaagcc 704
>dbj|AK067147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098B06, full insert sequence Length = 1032 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 ||||||||||||||||| || ||||||||| |||| Sbjct: 675 aagccagagcccaagccagagcccaagccgcagcc 709 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagcc 439 ||||||||||| |||||||| |||||||| ||||| Sbjct: 663 aagccagagccgaagccagagcccaagccagagcc 697 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcc 433 ||||||||||| |||||||| |||||||| Sbjct: 675 aagccagagcccaagccagagcccaagcc 703
>dbj|AK061567.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F04, full insert sequence Length = 1080 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 ||||||||||||||||| || ||||||||| |||| Sbjct: 673 aagccagagcccaagccagagcccaagccgcagcc 707 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagcc 439 ||||||||||| |||||||| |||||||| ||||| Sbjct: 661 aagccagagccgaagccagagcccaagccagagcc 695 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcc 433 ||||||||||| |||||||| |||||||| Sbjct: 673 aagccagagcccaagccagagcccaagcc 701
>dbj|AK059996.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-F05, full insert sequence Length = 989 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagcc 397 ||||||||||||||||| || ||||||||| |||| Sbjct: 673 aagccagagcccaagccagagcccaagccgcagcc 707 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagcc 439 ||||||||||| |||||||| |||||||| ||||| Sbjct: 661 aagccagagccgaagccagagcccaagccagagcc 695 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcc 433 ||||||||||| |||||||| |||||||| Sbjct: 673 aagccagagcccaagccagagcccaagcc 701
>gb|AY109530.1| Zea mays CL1228_1 mRNA sequence Length = 1471 Score = 46.1 bits (23), Expect = 0.100 Identities = 65/79 (82%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagcca 422 ||||||||||| || || ||||| || |||||||| | |||| |||| | ||||||||| Sbjct: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagcca 672 Query: 423 gaacccaagcccgagccga 441 || || ||||| ||||||| Sbjct: 673 gagcctaagcctgagccga 691 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 402 ccaaagccagagcctaagccagaacccaagcccgagccgatgcctaaaccaga 454 |||| |||||| ||||||||||| || ||||| ||||||| || |||||||| Sbjct: 814 ccaaggccagaacctaagccagagccaaagcctgagccgaaaccgaaaccaga 866 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 ccaaagccagagcctaagcc 421 |||||||||||||||||||| Sbjct: 1054 ccaaagccagagcctaagcc 1073
>gb|AC024826.1| Caenorhabditis elegans cosmid Y55F3AM, complete sequence Length = 107705 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Minus Query: 293 acctatgcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagcct 350 ||||| |||||||||||| || ||||| ||||| |||| || |||| |||||||||| Sbjct: 92057 acctaagcctaagcctgagcctatgcctaagcctaagcctaagcctaagcctaagcct 92000
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 369 gagcccaagccggaacccaagccgga 394 ||||| |||||||||||||||||||| Sbjct: 2029223 gagccgaagccggaacccaagccgga 2029198 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 cccaagccggaacccaagccggagccga 399 |||||||||||||| ||||| ||||||| Sbjct: 2029175 cccaagccggaacctaagcccgagccga 2029148
>emb|Z81147.1|CET09E11 Caenorhabditis elegans Cosmid T09E11, complete sequence Length = 33746 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Minus Query: 299 gcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagc 348 ||||||||||||||| | ||| |||| ||||| ||||||| |||||||| Sbjct: 4566 gcctaagcctgaacctaagcctaagcttgagccaaaacctaggcctaagc 4517
>ref|XM_503602.1| Yarrowia lipolytica CLIB122, YALI0E05819g predicted mRNA Length = 4176 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Minus Query: 366 ccagagcccaagccggaacccaagccggagccgatgccaaagccagagcc 415 |||||||| |||||||||| ||||||||||| |||| |||||||||| Sbjct: 3587 ccagagccggagccggaaccagagccggagccggagccagagccagagcc 3538
>gb|AC087482.9| Homo sapiens chromosome 15, clone RP11-540N15, complete sequence Length = 194546 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 318 ccaaagccggagcccaaaccta 339 |||||||||||||||||||||| Sbjct: 95266 ccaaagccggagcccaaaccta 95245
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 cgcggccgctgctggccggggc 194 |||||||||||||||||||||| Sbjct: 2703001 cgcggccgctgctggccggggc 2702980
>gb|AC093334.4| Homo sapiens chromosome 15, clone RP11-798K3, complete sequence Length = 220807 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 318 ccaaagccggagcccaaaccta 339 |||||||||||||||||||||| Sbjct: 19522 ccaaagccggagcccaaaccta 19543
>emb|AL032623.1|CEY43F8B Caenorhabditis elegans YAC Y43F8B, complete sequence Length = 101679 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 gcccaaacctatgcctaagcct 350 |||||||||||||||||||||| Sbjct: 61020 gcccaaacctatgcctaagcct 60999
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Minus Query: 366 ccagagcccaagccggaacccaagccggagccgatgccaaagccagagcc 415 |||||||| |||||||||| ||||||||||| |||| |||||||||| Sbjct: 665617 ccagagccggagccggaaccagagccggagccggagccagagccagagcc 665568
>ref|XM_477690.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1057 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacccaagcc 433 |||| |||| || |||||||||||||||||||| Sbjct: 706 gccacagcctgatcctaagccagaacccaagcc 738
>ref|XM_477694.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1088 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacccaagcc 433 |||| |||| || |||||||||||||||||||| Sbjct: 706 gccacagcctgatcctaagccagaacccaagcc 738
>ref|XM_361281.1| Magnaporthe grisea 70-15 hypothetical protein (MG03755.4) partial mRNA Length = 885 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagccga 441 |||||||| || ||||| |||||||||||||| |||| Sbjct: 247 aagccagaacccaagcccgaacccaagcccgaaccga 283 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagcc 391 |||||||| |||||||| ||||||||||| Sbjct: 247 aagccagaacccaagcccgaacccaagcc 275
>gb|AY623109.1| Homo sapiens TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa (TAF1) gene, complete cds Length = 100711 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 ccccgagccggagcccaagcc 229 ||||||||||||||||||||| Sbjct: 56552 ccccgagccggagcccaagcc 56532
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcc 433 |||||||| || ||||||||||||||||| Sbjct: 1106709 aagccagaacccaagccagaacccaagcc 1106737 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagcc 391 |||||||| |||||||| ||||||||||| Sbjct: 1106709 aagccagaacccaagccagaacccaagcc 1106737
>emb|Z81502.1|CEF14B6 Caenorhabditis elegans Cosmid F14B6, complete sequence Length = 29283 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 294 cctatgcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaa 346 ||||||||||||||| | |||| ||| |||| ||||||| ||||||||||| Sbjct: 7996 cctatgcctaagcctaagcccaagcccaagcgcaagcccaagcctatgcctaa 8048 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 agcccaagcctatgcctaaa 263 |||||||||||||||||||| Sbjct: 8030 agcccaagcctatgcctaaa 8049
>gb|AF040648.2| Caenorhabditis elegans fosmid H19M22, complete sequence Length = 44699 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 302 taagcctgaacccatgccaaagccggagcccaaacctatgcctaagcct 350 |||||||||||| | ||| ||||| |||| ||||||| |||||||||| Sbjct: 5521 taagcctgaacctaagcctaagcctaagcctaaacctaagcctaagcct 5569
>gb|AF025452.3| Caenorhabditis elegans cosmid B0454, complete sequence Length = 44397 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 gagcccaagcctatgcctaaacctgaacc 271 ||||| ||||||| ||||||||||||||| Sbjct: 17685 gagcctaagcctaagcctaaacctgaacc 17713
>gb|AF519489.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete cds Length = 1189 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcccgagccgatgcctaaaccagaacc 457 ||||||||||| || |||||||| ||||| ||||| | ||| |||||||||| Sbjct: 902 aagccagagccaaaaccagaacctaagcctgagcctaagccagaaccagaacc 954
>gb|AF519479.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete cds Length = 1183 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aagccagagcctaagccagaacccaagcc 433 ||||| ||||||||||||||||| ||||| Sbjct: 938 aagcctgagcctaagccagaacctaagcc 966
>gb|AC024859.1| Caenorhabditis elegans cosmid Y71H2AM, complete sequence Length = 143786 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 244 agcccaagcctatgcctaaacctgaaccc 272 |||| ||||||||| |||||||||||||| Sbjct: 64140 agcctaagcctatggctaaacctgaaccc 64168
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 aagccggaacccaagccggagccga 399 ||||||||||| ||||||||||||| Sbjct: 1578532 aagccggaaccgaagccggagccga 1578556
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagcc 391 ||||| ||| ||||||||||||||||||| Sbjct: 324590 aagcccgaggccaagccggaacccaagcc 324618
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagcc 391 ||||| ||| ||||||||||||||||||| Sbjct: 232429 aagcccgaggccaagccggaacccaagcc 232457
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagcc 391 ||||| ||| ||||||||||||||||||| Sbjct: 99699 aagcccgaggccaagccggaacccaagcc 99727
>gb|AF331851.1| Saccharum hybrid cultivar CP65-357 proline-rich protein (PRP) gene, partial cds Length = 2548 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 406 agccagagcctaagccagaacccaagcccgagccgatgcctaaaccaga 454 |||| ||||||||||||||||| || ||||| || |||| |||||||| Sbjct: 2444 agcctgagcctaagccagaaccaaaacccgaaccattgccgaaaccaga 2492 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 402 ccaaagccagagcctaagccagaacccaagcc 433 ||||| |||||||||||||| || |||||||| Sbjct: 2248 ccaaaaccagagcctaagcctgagcccaagcc 2279
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 401 gccaaagccagagcctaagccagaacccaagcc 433 ||||||||||| ||||||||||| |||||||| Sbjct: 65723 gccaaagccagggcctaagccagggcccaagcc 65691
>gb|AY224438.1| Oryza sativa (japonica cultivar-group) isolate 23221 proline-rich protein mRNA, complete cds Length = 1251 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 375 aagccggaacccaagccggagccgatgccaaagccagagcc 415 ||||||||||| || |||||||| | |||||||||||||| Sbjct: 451 aagccggaaccaaaaccggagcccaaaccaaagccagagcc 491 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 388 agccggagccgatgccaaagccagagcct 416 |||||||||||| |||||||||| ||||| Sbjct: 164 agccggagccgaagccaaagccaaagcct 192 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 317 gccaaagccggagcccaaacctatgcctaagcctga 352 ||||||||| || || ||||||| |||||||||||| Sbjct: 1149 gccaaagcctgaaccgaaacctaagcctaagcctga 1184 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 1042 ccaaagccagagcccaagcc 1061 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccgga 394 ||||||||||| || |||||||| |||||||| Sbjct: 427 aagccagagccaaaaccggaaccgaagccgga 458 Score = 40.1 bits (20), Expect = 6.2 Identities = 65/80 (81%) Strand = Plus / Plus Query: 318 ccaaagccggagcccaaacctatgcctaagcctgaacccatgccaaagccagagcccaag 377 |||||||| || || |||||| ||||||||||||||| | ||| | |||||||| || Sbjct: 274 ccaaagccagaaccaaaacctgagcctaagcctgaacctaaaccatacccagagccaaaa 333 Query: 378 ccggaacccaagccggagcc 397 ||||| || ||||| ||||| Sbjct: 334 ccggagccgaagccagagcc 353
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacccaagcc 433 |||| |||| || |||||||||||||||||||| Sbjct: 13313542 gccacagcctgatcctaagccagaacccaagcc 13313574 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 401 gccaaagccagagcctaagccagaacccaagcc 433 |||| |||| || |||||||||||||||||||| Sbjct: 13301007 gccacagcctgatcctaagccagaacccaagcc 13300975
>gb|AF098994.1| Caenorhabditis elegans cosmid T06A4, complete sequence Length = 32053 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 244 agcccaagcctatgcctaaacctga 268 ||||||||||||||||||| ||||| Sbjct: 24832 agcccaagcctatgcctaagcctga 24808 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 agcccaaacctatgcctaagcctga 352 ||||||| ||||||||||||||||| Sbjct: 24832 agcccaagcctatgcctaagcctga 24808 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 275 gccgaagccggagcccacacctatgcctaagcctga 310 ||||||||| |||||| ||||||||||||||||| Sbjct: 24843 gccgaagcctaagcccaagcctatgcctaagcctga 24808
>dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1123_B01 Length = 105736 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacccaagcc 433 |||| |||| || |||||||||||||||||||| Sbjct: 27980 gccacagcctgatcctaagccagaacccaagcc 28012 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 401 gccaaagccagagcctaagccagaacccaagcc 433 |||| |||| || |||||||||||||||||||| Sbjct: 15445 gccacagcctgatcctaagccagaacccaagcc 15413
>dbj|AP004264.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0025D09 Length = 142593 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacccaagcc 433 |||| |||| || |||||||||||||||||||| Sbjct: 101405 gccacagcctgatcctaagccagaacccaagcc 101437 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 401 gccaaagccagagcctaagccagaacccaagcc 433 |||| |||| || |||||||||||||||||||| Sbjct: 88870 gccacagcctgatcctaagccagaacccaagcc 88838
>dbj|AK105956.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D07, full insert sequence Length = 1057 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacccaagcc 433 |||| |||| || |||||||||||||||||||| Sbjct: 706 gccacagcctgatcctaagccagaacccaagcc 738
>dbj|AK105945.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-C04, full insert sequence Length = 1088 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacccaagcc 433 |||| |||| || |||||||||||||||||||| Sbjct: 706 gccacagcctgatcctaagccagaacccaagcc 738
>ref|NM_209907.1| Eremothecium gossypii AEL306Cp (AEL306C), mRNA Length = 3879 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccagaacccaagcc 433 ||||||||||| ||||||||||| |||||||| Sbjct: 3297 gccaaagccagggcctaagccagggcccaagcc 3329
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 363 aagccagagcccaagccggaacccaagccggagccga 399 ||||| ||||| || |||||||| ||||||||||||| Sbjct: 1551384 aagcctgagccgaaaccggaaccgaagccggagccga 1551420
>emb|Y08772.1|HSPABII Homo sapiens PABII pseudogene Length = 1930 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 ccccgagccggagcccaagcc 229 ||||||||||||||||||||| Sbjct: 312 ccccgagccggagcccaagcc 332
>emb|AL590762.1|HSXDPA Homo sapiens chromosome X sequence from 6 PACs 1 BAC and 1 cosmid, region GJB1-DXS559 map Xq13.1; segment 1/2, complete sequence Length = 305000 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 ccccgagccggagcccaagcc 229 ||||||||||||||||||||| Sbjct: 262387 ccccgagccggagcccaagcc 262367
>gb|AF022969.1| Caenorhabditis elegans cosmid C29G2, complete sequence Length = 19194 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 321 aagccggagcccaaacctatgcctaagcctga 352 ||||||||||| || |||| |||||||||||| Sbjct: 12809 aagccggagcctaagcctaagcctaagcctga 12840
>ref|XM_515163.1| PREDICTED: Pan troglodytes similar to D-PCa-2 protein isoform c; Dresden prostate cancer 2; Dresden prostate carcinoma 2 (LOC458871), mRNA Length = 388 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 103 ccaaagccagagcccaagcc 122
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 gagaagctccccgagccggagccc 224 ||||||| |||||||||||||||| Sbjct: 1640851 gagaagccccccgagccggagccc 1640874
>ref|XM_530683.1| PREDICTED: Pan troglodytes LOC460985 (LOC460985), mRNA Length = 902 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 646 ccaaagccagagcccaagcc 627
>ref|NM_005517.2| Homo sapiens high-mobility group nucleosomal binding domain 2 (HMGN2), mRNA Length = 1306 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 293 ccaaagccagagcccaagcc 312
>ref|XM_516308.1| PREDICTED: Pan troglodytes similar to 2-hydroxyphytanoyl-CoA lyase (2-HPCL) (HSPC279) (LOC460203), mRNA Length = 1882 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 1712 ccaaagccagagcccaagcc 1731
>ref|XM_515655.1| PREDICTED: Pan troglodytes similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC459448), mRNA Length = 993 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 403 ccaaagccagagcccaagcc 422
>ref|XM_530248.1| PREDICTED: Pan troglodytes LOC457914 (LOC457914), mRNA Length = 922 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 642 ccaaagccagagcccaagcc 623
>ref|XM_530110.1| PREDICTED: Pan troglodytes LOC456663 (LOC456663), mRNA Length = 1412 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 643 ccaaagccagagcccaagcc 624
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 agcacaagtgcagcaacagc 92 |||||||||||||||||||| Sbjct: 906400 agcacaagtgcagcaacagc 906381
>gb|AE017130.1| Yersinia pestis biovar Medievalis str. 91001 section 4 of 16 of the complete genome Length = 290510 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ctccggcttcagcctcgcgg 177 |||||||||||||||||||| Sbjct: 280534 ctccggcttcagcctcgcgg 280515
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 gtgctcctcgtcgggctgctcgcg 155 |||||||||||||||| ||||||| Sbjct: 622491 gtgctcctcgtcgggcagctcgcg 622468
>gb|AF045637.2| Caenorhabditis elegans cosmid C44C11, complete sequence Length = 11710 Score = 40.1 bits (20), Expect = 6.2 Identities = 44/52 (84%) Strand = Plus / Minus Query: 299 gcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagcct 350 ||||||||||||||| |||| || || ||||| || |||| |||||||||| Sbjct: 333 gcctaagcctgaacctatgcttaaacctgagcctaagcctaagcctaagcct 282
>gb|BC081567.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88718 IMAGE:4131303), complete cds Length = 1230 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 191 ccaaagccagagcccaagcc 210
>gb|AY704551.1| Gekko japonicus GekBS049P mRNA, complete cds Length = 1222 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 214 ccaaagccagagcccaagcc 233
>gb|AC009842.9| Drosophila melanogaster clone BACR04C12, complete sequence Length = 163183 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 agccagagcccaagccggaa 383 |||||||||||||||||||| Sbjct: 156856 agccagagcccaagccggaa 156875
>ref|XM_359498.1| Magnaporthe grisea 70-15 predicted protein (MG05279.4) partial mRNA Length = 1080 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ccccgagccggagcccaagc 228 |||||||||||||||||||| Sbjct: 528 ccccgagccggagcccaagc 547
>gb|BC075837.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88719 IMAGE:6272425), complete cds Length = 1306 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 293 ccaaagccagagcccaagcc 312
>gb|AY659008.1| Synthetic construct Peudomonas aeruginosa clone FLH042650.01F PA1407 gene, partial cds Length = 942 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 tcgcggccgctgctggccgg 191 |||||||||||||||||||| Sbjct: 90 tcgcggccgctgctggccgg 109
>gb|BC072010.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88720 IMAGE:6273507), complete cds Length = 1222 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 192 ccaaagccagagcccaagcc 211
>gb|BC072011.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88721 IMAGE:6647282), complete cds Length = 1209 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 188 ccaaagccagagcccaagcc 207
>gb|BC000378.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:8383 IMAGE:2820349), complete cds Length = 1250 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 208 ccaaagccagagcccaagcc 227
>gb|BC014644.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:15731 IMAGE:3355317), complete cds Length = 1231 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 188 ccaaagccagagcccaagcc 207
>gb|BC003050.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:750 IMAGE:3543809), complete cds Length = 1242 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 198 ccaaagccagagcccaagcc 217
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 gtgctcctcgtcgggctgctcgcg 155 |||||||||||||||| ||||||| Sbjct: 3152913 gtgctcctcgtcgggcagctcgcg 3152936
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 ctccggcttcagcctcgcgg 177 |||||||||||||||||||| Sbjct: 1364613 ctccggcttcagcctcgcgg 1364632
>gb|BC070297.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88292 IMAGE:4282630), complete cds Length = 1181 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 156 ccaaagccagagcccaagcc 175
>gb|AF043706.4| Caenorhabditis elegans cosmid ZC123, complete sequence Length = 44292 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 321 aagccggagcccaaacctatgcctaagcctga 352 ||||| ||||| ||||||| |||||||||||| Sbjct: 30865 aagcctgagcctaaacctaagcctaagcctga 30834 Score = 40.1 bits (20), Expect = 6.2 Identities = 59/72 (81%) Strand = Plus / Minus Query: 279 aagccggagcccacacctatgcctaagcctgaacccatgccaaagccggagcccaaacct 338 ||||| ||||| | ||||| |||||||||||| | ||| ||||| ||||||||||| Sbjct: 30865 aagcctgagcctaaacctaagcctaagcctgaggttaagcctaagcctaagcccaaacct 30806 Query: 339 atgcctaagcct 350 | |||||||||| Sbjct: 30805 aagcctaagcct 30794 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 321 aagccggagcccaaacctatgcctaagcctga 352 ||||| ||||| ||||||| |||||||||||| Sbjct: 30409 aagcctgagcctaaacctaagcctaagcctga 30378 Score = 40.1 bits (20), Expect = 6.2 Identities = 59/72 (81%) Strand = Plus / Minus Query: 279 aagccggagcccacacctatgcctaagcctgaacccatgccaaagccggagcccaaacct 338 ||||| ||||| | ||||| |||||||||||| | ||| ||||| ||||||||||| Sbjct: 30409 aagcctgagcctaaacctaagcctaagcctgaggttaagcctaagcctaagcccaaacct 30350 Query: 339 atgcctaagcct 350 | |||||||||| Sbjct: 30349 aagcctaagcct 30338
>gb|AF016678.1| Caenorhabditis elegans cosmid K07E8, complete sequence Length = 36763 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 394 agccgatgccaaagccagagcctaagccagaacccaagcc 433 |||| |||||||||||| | ||||||||| |||| ||||| Sbjct: 13575 agcctatgccaaagccaaaacctaagccaaaacctaagcc 13536
>ref|XM_846735.1| PREDICTED: Canis familiaris similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC609476), mRNA Length = 580 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 226 ccaaagccagagcccaagcc 245
>ref|XM_844334.1| PREDICTED: Canis familiaris similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC607595), mRNA Length = 1096 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 646 ccaaagccagagcccaagcc 665
>ref|NM_000540.1| Homo sapiens ryanodine receptor 1 (skeletal) (RYR1), mRNA Length = 15359 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 359 gccaaagccagagcccaagccggaacccaagccggagccg 398 |||| ||||||||||| |||||||||| ||| ||||||| Sbjct: 13594 gccagagccagagcccgagccggaaccagagctggagccg 13633
>gb|AC141425.3| Mus musculus BAC clone RP23-283P2 from chromosome 14, complete sequence Length = 174986 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 80398 ccaaagccagagcccaagcc 80379
>ref|XM_843078.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0476) partial mRNA Length = 5088 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 agcacaagtgcagcaacagc 92 |||||||||||||||||||| Sbjct: 2051 agcacaagtgcagcaacagc 2070
>ref|XM_534124.2| PREDICTED: Canis familiaris similar to L-plastin (Lymphocyte cytosolic protein 1) (LCP-1) (LC64P), transcript variant 1 (LOC476921), mRNA Length = 3110 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 2124 ccaaagccagagcccaagcc 2143
>ref|XM_843311.1| PREDICTED: Canis familiaris similar to L-plastin (Lymphocyte cytosolic protein 1) (LCP-1) (LC64P), transcript variant 2 (LOC476921), mRNA Length = 3116 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 2130 ccaaagccagagcccaagcc 2149
>ref|XM_847544.1| PREDICTED: Canis familiaris similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC610127), mRNA Length = 462 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 200 ccaaagccagagcccaagcc 219
>emb|AL117207.1|CEY60A3A Caenorhabditis elegans YAC Y60A3A, complete sequence Length = 122592 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 gagcccaagcctatgcctaaacct 266 ||||| |||||||||||||||||| Sbjct: 75338 gagcctaagcctatgcctaaacct 75361
>gb|BC075848.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone IMAGE:4581619), **** WARNING: chimeric clone **** Length = 3796 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 2777 ccaaagccagagcccaagcc 2796
>ref|XM_847200.1| PREDICTED: Canis familiaris similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC609853), mRNA Length = 1197 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 203 ccaaagccagagcccaagcc 222
>gb|AC112504.6| Homo sapiens 3 BAC RP11-271K21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 215077 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 96372 ccaaagccagagcccaagcc 96391
>ref|XM_845631.1| PREDICTED: Canis familiaris similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC608920), mRNA Length = 1198 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 203 ccaaagccagagcccaagcc 222
>gb|AC099575.10| Mus musculus chromosome 14, clone RP23-83E2, complete sequence Length = 138102 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ccaaagccagagcctaagcc 421 |||||||||||||||||||| Sbjct: 13553 ccaaagccagagcctaagcc 13534
>ref|XM_546606.2| PREDICTED: Canis familiaris similar to period 1 (LOC489488), mRNA Length = 4266 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ccagagcccaagccggaacccaag 389 ||||||||||||||||| |||||| Sbjct: 3587 ccagagcccaagccggagcccaag 3564
>ref|XM_845691.1| PREDICTED: Canis familiaris similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC608614), mRNA Length = 1535 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 556 ccaaagccagagcccaagcc 575
>gb|AC110157.7| Mus musculus chromosome 14, clone RP23-151K23, complete sequence Length = 243114 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ccaaagccagagcctaagcc 421 |||||||||||||||||||| Sbjct: 185157 ccaaagccagagcctaagcc 185138
>gb|BC063551.1| Homo sapiens TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:4779792), complete cds Length = 1363 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 436 ccaaagccagagcccaagcc 455
>gb|BC001783.1| Homo sapiens mRNA similar to ribosomal protein L35a (cDNA clone IMAGE:3355533) Length = 4331 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 3047 ccaaagccagagcccaagcc 3028
>emb|Z83840.7|HS216E10 Human DNA sequence from clone CTA-216E10 on chromosome 22, complete sequence Length = 122320 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 104540 ccaaagccagagcccaagcc 104521
>emb|Z97055.1|HS388M5 Human DNA sequence from clone RP3-388M5 on chromosome 22, complete sequence Length = 177568 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 56296 ccaaagccagagcccaagcc 56315
>emb|AL607067.17| Human DNA sequence from clone RP11-201K10 on chromosome 1 Contains a high-mobility group nucleosomal binding domain 2 (HMGN2) pseudogene and the KRTCAP2 gene for keratinocyte associated protein 2, complete sequence Length = 32360 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 6823 ccaaagccagagcccaagcc 6842
>emb|AL590822.36| Human DNA sequence from clone RP11-181G12 on chromosome 1 Contains the 3' end of the PRKCZ gene for protein kinase C zeta, a novel gene, a novel gene (FLJ31031), the SKI gene for v-ski sarcoma viral oncogene homolog (avian) and five CpG islands, complete sequence Length = 179836 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 aacagctgcgagaaagcagc 106 |||||||||||||||||||| Sbjct: 130851 aacagctgcgagaaagcagc 130832
>emb|AL513365.27| Human DNA sequence from clone RP3-476K8 on chromosome 1 Contains the LIN28 gene for lin-28 homolog (C. elegans), the DHDDS gene for dehydrodolichyl diphosphate synthase, a ribosomal protein L17 (RPL17) pseudogene, a novel gene, the HMGN2 gene for high-mobility group nucleosomal binding domain 2 and two CpG islands, complete sequence Length = 107415 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 40247 ccaaagccagagcccaagcc 40228
>emb|AL513185.12| Human DNA sequence from clone RP11-167P22 on chromosome 10 Contains the 5' end of the CBARA1 gene for calcium binding atopy-related autoantigen 1, an HMG17 pseudogene, a cytochrome c oxidase subunit VIIc (COX7C) pseudogene, a novel gene, a novel pseudogene (FLJ12684) and a CpG island, complete sequence Length = 163632 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 137332 ccaaagccagagcccaagcc 137313
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 tgccaaagccagagcccaagccgg 381 |||| ||||||||||||||||||| Sbjct: 2885019 tgcccaagccagagcccaagccgg 2885042
>emb|AL390838.26| Human DNA sequence from clone RP11-158D2 on chromosome 9 Contains a novel pseudogene and a novel gene, complete sequence Length = 193709 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 63950 ccaaagccagagcccaagcc 63969
>emb|AL359262.9| Human DNA sequence from clone RP11-334O13 on chromosome 13 Contains a high-mobility group pseudogene, complete sequence Length = 162763 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 140875 ccaaagccagagcccaagcc 140894
>emb|AL158139.26| Human DNA sequence from clone RP1-80B9 on chromosome 6 Contains the 5' end of the GMDS gene for GDP-mannose 4,6-dehydratase, a novel gene and a CpG island, complete sequence Length = 130403 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 112185 ccaaagccagagcccaagcc 112204
>emb|AL161781.12| Human DNA sequence from clone RP11-297B17 on chromosome 9 Contains the 5' end of the PAX5 gene for paired box gene 5 (B-cell lineage specific activator protein) (BSAP), a ribosomal protein L32 (RPL32) pseudogene and five CpG islands, complete sequence Length = 159096 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 gaacccatgccaaagccagagccc 374 ||||||| |||||||||||||||| Sbjct: 66787 gaacccaggccaaagccagagccc 66810
>emb|AL139415.10| Human DNA sequence from clone RP3-477M7 on chromosome 1 Contains the ENO1 gene for enolase 1 (alpha), two novel genes, a novel pseudogene, a pseudogene similar to part of a Zinc finger protein, a pseudogene similar to part of cytochrome oxidase subunit II, the CA6 gene for carbonic anhydrase VI and a CpG island, complete sequence Length = 141428 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 39030 ccaaagccagagcccaagcc 39049
>emb|CR859118.1| Pongo pygmaeus mRNA; cDNA DKFZp468C094 (from clone DKFZp468C094) Length = 1221 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 211 ccaaagccagagcccaagcc 230
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 ctccggcttcagcctcgcgg 177 |||||||||||||||||||| Sbjct: 1356735 ctccggcttcagcctcgcgg 1356754
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 370 agcccaagccggaacccaagccggagcc 397 |||||||||||||||| |||||||||| Sbjct: 277669 agcccaagccggaaccgcagccggagcc 277696
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 gtgctcctcgtcgggctgctcgcg 155 |||||||||||||||| ||||||| Sbjct: 2882854 gtgctcctcgtcgggcagctcgcg 2882877
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 gctcctcgtcgggctgctcgcggc 157 |||||| ||||||||||||||||| Sbjct: 248933 gctcctggtcgggctgctcgcggc 248910
>emb|AL593845.5| Zebrafish DNA sequence from clone BUSM1-142B24 in linkage group 17 Contains a novel gene for a protein similar to human FLJ11186, a novel gene similar to human KIAA1316 and fly CG2747, a novel gene for a protein with a HECT-domain (ubiquitin-transferase) and a CpG island, complete sequence Length = 89159 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 gccggagccgatgccaaagc 408 |||||||||||||||||||| Sbjct: 33283 gccggagccgatgccaaagc 33302
>emb|AJ414153.1| Yersinia pestis strain CO92 complete genome; segment 13/20 Length = 258050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 ctccggcttcagcctcgcgg 177 |||||||||||||||||||| Sbjct: 55324 ctccggcttcagcctcgcgg 55343
>emb|AL646002.6| Mouse DNA sequence from clone RP23-237P10 on chromosome 11 Contains gene D930008C07Rik, the Canx gene for calnexin, a high mobility group nucleosomal binding domain 2 (Hmgn2) pseudogene and two CpG islands, complete sequence Length = 113907 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 105261 ccaaagccagagcccaagcc 105280
>emb|BX465838.15| Zebrafish DNA sequence from clone DKEY-11J8 in linkage group 17, complete sequence Length = 229940 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 gccggagccgatgccaaagc 408 |||||||||||||||||||| Sbjct: 226789 gccggagccgatgccaaagc 226770
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 369 gagcccaagccggaacccaagccg 392 ||||||||||||||| |||||||| Sbjct: 1662478 gagcccaagccggaagccaagccg 1662501
>emb|CR624609.1| full-length cDNA clone CS0CAP008YJ21 of Thymus of Homo sapiens (human) Length = 1138 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 182 ccaaagccagagcccaagcc 201
>emb|CR624004.1| full-length cDNA clone CS0DI075YK09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1142 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 188 ccaaagccagagcccaagcc 207
>emb|CR622123.1| full-length cDNA clone CS0DL009YG08 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1180 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 220 ccaaagccagagcccaagcc 239
>emb|CR621179.1| full-length cDNA clone CS0DI055YJ13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1131 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 195 ccaaagccagagcccaagcc 214
>emb|CR619884.1| full-length cDNA clone CS0DJ013YC12 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1305 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 399 ccaaagccagagcccaagcc 418
>emb|CR614459.1| full-length cDNA clone CS0DM006YI10 of Fetal liver of Homo sapiens (human) Length = 1159 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 202 ccaaagccagagcccaagcc 221
>emb|CR612973.1| full-length cDNA clone CL0BA002ZH08 of Placenta of Homo sapiens (human) Length = 1119 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 191 ccaaagccagagcccaagcc 210
>emb|CR611141.1| full-length cDNA clone CS0CAP003YB16 of Thymus of Homo sapiens (human) Length = 1173 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 198 ccaaagccagagcccaagcc 217
>emb|CR609228.1| full-length cDNA clone CS0DF002YD20 of Fetal brain of Homo sapiens (human) Length = 1496 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 669 ccaaagccagagcccaagcc 688
>emb|CR608465.1| full-length cDNA clone CL0BA008ZE05 of Placenta of Homo sapiens (human) Length = 1180 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 191 ccaaagccagagcccaagcc 210
>emb|CR607698.1| full-length cDNA clone CS0CAP006YC12 of Thymus of Homo sapiens (human) Length = 1153 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 198 ccaaagccagagcccaagcc 217
>emb|CR606135.1| full-length cDNA clone CS0DD003YG22 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1162 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 193 ccaaagccagagcccaagcc 212
>emb|CR605166.1| full-length cDNA clone CL0BA011ZG12 of Placenta of Homo sapiens (human) Length = 1184 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 195 ccaaagccagagcccaagcc 214
>emb|CR602382.1| full-length cDNA clone CS0DB001YD15 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1163 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 193 ccaaagccagagcccaagcc 212
>emb|CR599316.1| full-length cDNA clone CS0CAP006YG17 of Thymus of Homo sapiens (human) Length = 1174 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 196 ccaaagccagagcccaagcc 215
>emb|CR598323.1| full-length cDNA clone CS0CAP004YI14 of Thymus of Homo sapiens (human) Length = 1164 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 196 ccaaagccagagcccaagcc 215
>emb|CR596866.1| full-length cDNA clone CS0DH005YD16 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1184 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 195 ccaaagccagagcccaagcc 214
>emb|CR595538.1| full-length cDNA clone CS0DC025YM12 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1174 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 220 ccaaagccagagcccaagcc 239
>emb|CR595467.1| full-length cDNA clone CL0BB010ZB04 of Neuroblastoma of Homo sapiens (human) Length = 1127 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 191 ccaaagccagagcccaagcc 210
>emb|CR593313.1| full-length cDNA clone CS0DI020YC24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1157 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 195 ccaaagccagagcccaagcc 214
>emb|CR592727.1| full-length cDNA clone CS0DI051YN20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1167 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 199 ccaaagccagagcccaagcc 218
>emb|CR590834.1| full-length cDNA clone CS0DI082YF23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1032 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 135 ccaaagccagagcccaagcc 154
>emb|CR590487.1| full-length cDNA clone CS0DD005YI07 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1226 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 261 ccaaagccagagcccaagcc 280
>ref|NM_175960.3| Drosophila melanogaster dumpy CG33196-PB (dp) mRNA, complete cds Length = 69571 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 agccagagcccaagccggaa 383 |||||||||||||||||||| Sbjct: 63455 agccagagcccaagccggaa 63474
>gb|AC116441.2| Homo sapiens chromosome 3 clone RP11-20O23, complete sequence Length = 142374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 94301 ccaaagccagagcccaagcc 94282
>gb|AC022394.7| Homo sapiens chromosome 10 clone RP11-325M24, complete sequence Length = 154064 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 124759 ccaaagccagagcccaagcc 124778
>gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, complete sequence Length = 188117 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 86321 ccaaagccagagcccaagcc 86340
>dbj|AK136964.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430017G04 product:unclassifiable, full insert sequence Length = 2832 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 1752 ccaaagccagagcccaagcc 1733
>gb|AC099560.2| Homo sapiens chromosome 3 clone RP11-761N21, complete sequence Length = 192169 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 156963 ccaaagccagagcccaagcc 156982
>ref|XM_937222.1| PREDICTED: Homo sapiens similar to TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) (LOC653961), mRNA Length = 1826 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 909 ccaaagccagagcccaagcc 928
>ref|XM_945624.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2), transcript variant 3 (LOC649445), mRNA Length = 1214 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 217 ccaaagccagagcccaagcc 236
>ref|XM_945621.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2), transcript variant 2 (LOC649445), mRNA Length = 1200 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 217 ccaaagccagagcccaagcc 236
>ref|XM_942006.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2), transcript variant 1 (LOC649445), mRNA Length = 1221 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 217 ccaaagccagagcccaagcc 236
>ref|XM_929021.1| PREDICTED: Homo sapiens similar to TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) (LOC653695), mRNA Length = 1826 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 909 ccaaagccagagcccaagcc 928
>ref|XM_933938.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2), transcript variant 3 (LOC643872), mRNA Length = 1214 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 217 ccaaagccagagcccaagcc 236
>ref|XM_933937.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2), transcript variant 2 (LOC643872), mRNA Length = 1200 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 217 ccaaagccagagcccaagcc 236
>ref|XM_929731.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2), transcript variant 1 (LOC643872), mRNA Length = 1221 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 217 ccaaagccagagcccaagcc 236
>ref|XM_927624.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC644498), mRNA Length = 440 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 210 ccaaagccagagcccaagcc 229
>ref|XM_939591.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC650503), mRNA Length = 440 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 210 ccaaagccagagcccaagcc 229
>ref|XM_941943.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC652483), mRNA Length = 696 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 424 ccaaagccagagcccaagcc 443
>ref|XM_930287.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC647242), mRNA Length = 696 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 424 ccaaagccagagcccaagcc 443
>ref|XM_937902.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC648822), mRNA Length = 525 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 103 ccaaagccagagcccaagcc 122
>ref|XM_937758.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC148915), mRNA Length = 1568 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 562 ccaaagccagagcccaagcc 581
>ref|XM_086360.6| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC148915), mRNA Length = 1568 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 562 ccaaagccagagcccaagcc 581
>emb|CR542122.1| Homo sapiens full open reading frame cDNA clone RZPDo834C0523D for gene HMGN2, high-mobility group nucleosomal binding domain 2; complete cds, incl. stopcodon Length = 273 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 103 ccaaagccagagcccaagcc 122
>dbj|AB179399.1| Macaca fascicularis testis cDNA clone: QtsA-19263, similar to human high-mobility group nucleosomal binding domain 2(HMGN2), mRNA, RefSeq: NM_005517.1 Length = 1092 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 235 ccaaagccagagcccaagcc 254
>gb|AC087794.1| Caenorhabditis elegans cosmid Y32G9A, complete sequence Length = 48110 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 gagcccaaacctatgcctaagcct 350 ||||||||||||| |||||||||| Sbjct: 31775 gagcccaaacctaagcctaagcct 31752
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 370 agcccaagccggaacccaagccggagcc 397 ||||||| |||||||||||||| ||||| Sbjct: 3241243 agcccaaaccggaacccaagcccgagcc 3241270
>gb|AC092232.1|AC092232 Drosophila melanogaster, chromosome 2L, region 24E-24F, BAC clone BACR28K16, complete sequence Length = 182897 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 agccagagcccaagccggaa 383 |||||||||||||||||||| Sbjct: 42650 agccagagcccaagccggaa 42669
>gb|AF130351.2|AF130351 Homo sapiens chromosome 21 clone PAC 190N10 map 21q11.2, complete sequence Length = 102043 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cacatccactttatctatcc 42 |||||||||||||||||||| Sbjct: 54326 cacatccactttatctatcc 54345
>ref|NG_000892.1| Homo sapiens high-mobility group (nonhistone chromosomal) protein 17-like 2 (HMG17L2) pseudogene on chromosome 22 Length = 465 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 203 ccaaagccagagcccaagcc 222
>ref|NG_001142.1| Homo sapiens high-mobility group (nonhistone chromosomal) protein 17 pseudogene 2 (HMG17P2) on chromosome 6 Length = 1308 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 267 ccaaagccagagcccaagcc 286
>ref|NG_002646.1| Homo sapiens high-mobility group (nonhistone chromosomal) protein 17-like 1 (HMG17L1) pseudogene on chromosome 22 Length = 1660 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 599 ccaaagccagagcccaagcc 618
>gb|AF040652.2| Caenorhabditis elegans cosmid T05A8, complete sequence Length = 33896 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 328 agcccaaacctatgcctaagcctgaacccatgccaaagcc 367 |||||||||||| |||||||||| | || ||||| ||||| Sbjct: 22503 agcccaaacctaggcctaagcctaagcctatgcctaagcc 22542
>gb|AF016669.1| Caenorhabditis elegans cosmid K10G6, complete sequence Length = 33588 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 agcccaagcctatgcctaaacctgaacc 271 |||| ||||||| ||||||||||||||| Sbjct: 20701 agcctaagcctaagcctaaacctgaacc 20674
>emb|CR377872.1| Pinus pinaster SSR, clone PPB3A06r Length = 536 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccaga 424 ||||||||||||||| |||||||| Sbjct: 302 gccaaagccagagccaaagccaga 325
>emb|CR377871.1| Pinus pinaster SSR, clone PPB3A06 Length = 582 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 gccaaagccagagcctaagccaga 424 ||||||||||||||| |||||||| Sbjct: 294 gccaaagccagagccaaagccaga 271
>ref|NM_200478.2| Danio rerio si:busm1-142b24.3 (si:busm1-142b24.3), mRNA Length = 6185 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 gccggagccgatgccaaagc 408 |||||||||||||||||||| Sbjct: 5774 gccggagccgatgccaaagc 5755
>gb|AC007854.4|AC007854 Drosophila melanogaster, chromosome 3R, region 98F-98F, BAC clone BACR13H19, complete sequence Length = 155666 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 gccaaagccagagcctaagccaga 424 ||||||||||||||| |||||||| Sbjct: 143606 gccaaagccagagccaaagccaga 143583
>gb|AC007947.5|AC007947 Drosophila melanogaster, chromosome 3R, region 98F-98F, BAC clone BACR11O03, complete sequence Length = 168505 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 gccaaagccagagcctaagccaga 424 ||||||||||||||| |||||||| Sbjct: 28671 gccaaagccagagccaaagccaga 28648
>gb|DQ015919.1| Homo sapiens tight junction protein 1 (zona occludens 1) (TJP1) gene, complete cds Length = 125625 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 92982 ccaaagccagagcccaagcc 92963
>gb|DQ000559.1| Synthetic construct clone PSF:109216 high mobility group protein 17 gene, complete cds Length = 345 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 175 ccaaagccagagcccaagcc 194
>gb|AC154309.1| Mus musculus BAC clone RP23-370I7 from chromosome 16, complete sequence Length = 178958 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cacaccacatccactttatc 37 |||||||||||||||||||| Sbjct: 100851 cacaccacatccactttatc 100870
>gb|AC117394.10| Homo sapiens 3 BAC RP11-529G21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 198170 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 168363 ccaaagccagagcccaagcc 168344
>gb|AC079775.6| Homo sapiens BAC clone RP11-295P2 from 2, complete sequence Length = 171987 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 417 aagccagaacccaagcccgagccg 440 ||||||||||||||||| |||||| Sbjct: 49255 aagccagaacccaagccagagccg 49278
>gb|BC029638.1| Homo sapiens, Similar to high-mobility group (nonhistone chromosomal) protein 17, clone IMAGE:4777228, mRNA Length = 1295 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 359 ccaaagccagagcccaagcc 378
>ref|NM_001003101.1| Canis familiaris non-histone chromosomal protein HMG-17 (HMG-17), mRNA Length = 656 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 188 ccaaagccagagcccaagcc 207
>gb|AC068538.8| Homo sapiens BAC clone RP11-141G4 from 2, complete sequence Length = 173169 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 131905 ccaaagccagagcccaagcc 131886
>gb|AC007395.3|AC007395 Homo sapiens BAC clone RP11-504O1 from 2, complete sequence Length = 158458 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 109688 ccaaagccagagcccaagcc 109707
>gb|AE004570.1| Pseudomonas aeruginosa PAO1, section 131 of 529 of the complete genome Length = 11398 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 tcgcggccgctgctggccgg 191 |||||||||||||||||||| Sbjct: 4115 tcgcggccgctgctggccgg 4096
>gb|AC027125.5| Homo sapiens chromosome 3 clone RP11-584M7 map 3p, complete sequence Length = 173842 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 117489 ccaaagccagagcccaagcc 117508
>emb|AL954299.13| Mouse DNA sequence from clone RP23-399D3 on chromosome 2, complete sequence Length = 142229 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cagaggaaccacacaccaca 26 |||||||||||||||||||| Sbjct: 26146 cagaggaaccacacaccaca 26127
>dbj|BS000011.1| Pan troglodytes chromosome 22 clone:RP43-017I17, map 22, complete sequences Length = 191345 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cacatccactttatctatcc 42 |||||||||||||||||||| Sbjct: 43775 cacatccactttatctatcc 43794
>dbj|AK026562.1| Homo sapiens cDNA: FLJ22909 fis, clone KAT05694, highly similar to HUMHMG17 Human non-histone chromosomal protein HMG-17 mRNA Length = 1164 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 147 ccaaagccagagcccaagcc 166
>emb|AJ012301.1|ZMA012301 Zea mays mRNA for proline-rich protein Length = 1648 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccaga 424 |||||||||||| ||||||||||| Sbjct: 506 gccaaagccagaacctaagccaga 529
>emb|AL163207.2|HS21C007 Homo sapiens chromosome 21 segment HS21C007 Length = 340000 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cacatccactttatctatcc 42 |||||||||||||||||||| Sbjct: 19460 cacatccactttatctatcc 19479
>gb|BC071707.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:87991 IMAGE:3849426), complete cds Length = 1200 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 198 ccaaagccagagcccaagcc 217
>emb|AL132876.4|CEY105E8A Caenorhabditis elegans YAC Y105E8A, complete sequence Length = 277607 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 328 agcccaaacctatgcctaagcctgaacccatgccaaagcc 367 |||| |||||| ||||||||||||||| ||||| ||||| Sbjct: 38574 agcctaaacctgagcctaagcctgaacctatgcctaagcc 38613
>gb|BC032140.2| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:29711 IMAGE:5021546), complete cds Length = 1265 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 197 ccaaagccagagcccaagcc 216
>gb|AF098988.4| Caenorhabditis elegans cosmid C50E10, complete sequence Length = 43461 Score = 40.1 bits (20), Expect = 6.2 Identities = 44/52 (84%) Strand = Plus / Minus Query: 299 gcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagcct 350 ||||||||||||||| |||| || || ||||| || |||| |||||||||| Sbjct: 42994 gcctaagcctgaacctatgcttaaacctgagcctaagcctaagcctaagcct 42943
>gb|AY109604.1| Zea mays CL1298_1 mRNA sequence Length = 1739 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 gccaaagccagagcctaagccaga 424 |||||||||||| ||||||||||| Sbjct: 506 gccaaagccagaacctaagccaga 529
>emb|AL032637.1|CEY43F8C Caenorhabditis elegans YAC Y43F8C, complete sequence Length = 120492 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 gagcccaagcctatgcctaaacct 266 ||||| |||||||||||||||||| Sbjct: 67824 gagcctaagcctatgcctaaacct 67847
>emb|Z46996.1|CEC34C12 Caenorhabditis elegans Cosmid C34C12, complete sequence Length = 34759 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 315 atgccaaagccggagcccaaacctatgcctaagcct 350 |||||||||||| |||| |||| || |||||||||| Sbjct: 25426 atgccaaagccgaagcctaaacttaagcctaagcct 25461
>emb|AL139020.5|CNS01DX2 Human chromosome 14 DNA sequence BAC R-164H13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 166308 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 cgctgctggccggggcctcg 198 |||||||||||||||||||| Sbjct: 51015 cgctgctggccggggcctcg 50996
>emb|AL163052.4|CNS01RIB Human chromosome 14 DNA sequence BAC R-769B21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 181905 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 34263 ccaaagccagagcccaagcc 34282
>gb|AE003767.2| Drosophila melanogaster chromosome 3R, section 105 of 118 of the complete sequence Length = 231562 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 gccaaagccagagcctaagccaga 424 ||||||||||||||| |||||||| Sbjct: 190876 gccaaagccagagccaaagccaga 190853
>gb|AE003576.5| Drosophila melanogaster chromosome 2L, section 15 of 83 of the complete sequence Length = 289893 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 agccagagcccaagccggaa 383 |||||||||||||||||||| Sbjct: 165017 agccagagcccaagccggaa 164998
>emb|AL160236.4|CNS01RH0 Human chromosome 14 DNA sequence BAC R-193F5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192401 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 46578 ccaaagccagagcccaagcc 46597
>gb|BC099178.1| Rattus norvegicus high mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:116347 IMAGE:7383003), complete cds Length = 1240 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 225 ccaaagccagagcccaagcc 244
>gb|BC099815.1| Rattus norvegicus high mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:124667 IMAGE:7929654), complete cds Length = 1228 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 234 ccaaagccagagcccaagcc 253
>gb|AC005933.1|AC005933 Homo sapiens chromosome 19, cosmid F15472, complete sequence Length = 36137 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 359 gccaaagccagagcccaagccggaacccaagccggagccg 398 |||| ||||||||||| |||||||||| ||| ||||||| Sbjct: 12710 gccagagccagagcccgagccggaaccagagctggagccg 12749
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gcggccgctgctggccgggg 193 |||||||||||||||||||| Sbjct: 3802023 gcggccgctgctggccgggg 3802004
>gb|U48498.1|HUMRYR50 Human skeletal muscle ryanodine receptor gene (RYR1), exon 92 Length = 672 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 359 gccaaagccagagcccaagccggaacccaagccggagccg 398 |||| ||||||||||| |||||||||| ||| ||||||| Sbjct: 344 gccagagccagagcccgagccggaaccagagctggagccg 383
>gb|AC024796.1| Caenorhabditis elegans cosmid Y48G1C, complete sequence Length = 60391 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 aagcctatgcctaaacctga 268 |||||||||||||||||||| Sbjct: 9647 aagcctatgcctaaacctga 9666
>ref|NM_001025624.1| Rattus norvegicus high mobility group nucleosomal binding domain 2 (Hmgn2), mRNA Length = 1240 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaaagccagagcccaagcc 379 |||||||||||||||||||| Sbjct: 225 ccaaagccagagcccaagcc 244 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,117,445 Number of Sequences: 3902068 Number of extensions: 3117445 Number of successful extensions: 64162 Number of sequences better than 10.0: 263 Number of HSP's better than 10.0 without gapping: 263 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61513 Number of HSP's gapped (non-prelim): 2542 length of query: 457 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 435 effective length of database: 17,147,199,772 effective search space: 7459031900820 effective search space used: 7459031900820 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)