ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet15b04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470576.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1254 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Plus Query: 261 tgcacgacgtcgacgccggtgaaggcgtacgccaagtgcatcgcgctgccgacgcagggc 320 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 121 tgcacgacgtcgacgccgttgaagacgtacgccaagtgcatcgcgctgccgacgcagggc 180 Query: 321 gcgacgctggcgtggacgtacgacgcgcgcaacgccacgctggacgcggccttcacgggg 380 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 181 gcgacgctggcgtggacgtacgacgcgcgcaacgcgacgctggacgcggcgttcacgggc 240 Query: 381 tccttcatctcgccgtcgggatgggtggcgtggggcgtcaaccaggacgcgccggccatg 440 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| Sbjct: 241 tccttcatctcgccgtcgggatgggtggcctggggcgtcaacaaggacgcgccggcgatg 300 Query: 441 gccggggcgcgcgtgatcgcc 461 |||| ||||||||| ||||| Sbjct: 301 accggcgcgcgcgtgctcgcc 321
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 261 tgcacgacgtcgacgccggtgaaggcgtacgccaagtgcatcgcgctgccgacgcagggc 320 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4871771 tgcacgacgtcgacgccgttgaagacgtacgccaagtgcatcgcgctgccgacgcagggc 4871712 Query: 321 gcgacgctggcgtggacgtacgacgcgcgcaacgccacgctggacgcggccttcacgggg 380 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 4871711 gcgacgctggcgtggacgtacgacgcgcgcaacgcgacgctggacgcggcgttcacgggc 4871652 Query: 381 tccttcatctcgccgtcgggatgggtggcgtggggcgtcaaccaggacgcgccggccatg 440 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| Sbjct: 4871651 tccttcatctcgccgtcgggatgggtggcctggggcgtcaacaaggacgcgccggcgatg 4871592 Query: 441 gccggggcgcgcgtgatcgcc 461 |||| ||||||||| ||||| Sbjct: 4871591 accggcgcgcgcgtgctcgcc 4871571 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 26 aaaacgccccactaaaaccccacttacg 53 |||||||||||||||||||||||||||| Sbjct: 4872075 aaaacgccccactaaaaccccacttacg 4872048
>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16, complete sequence Length = 159092 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Plus Query: 261 tgcacgacgtcgacgccggtgaaggcgtacgccaagtgcatcgcgctgccgacgcagggc 320 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 123776 tgcacgacgtcgacgccgttgaagacgtacgccaagtgcatcgcgctgccgacgcagggc 123835 Query: 321 gcgacgctggcgtggacgtacgacgcgcgcaacgccacgctggacgcggccttcacgggg 380 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 123836 gcgacgctggcgtggacgtacgacgcgcgcaacgcgacgctggacgcggcgttcacgggc 123895 Query: 381 tccttcatctcgccgtcgggatgggtggcgtggggcgtcaaccaggacgcgccggccatg 440 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| Sbjct: 123896 tccttcatctcgccgtcgggatgggtggcctggggcgtcaacaaggacgcgccggcgatg 123955 Query: 441 gccggggcgcgcgtgatcgcc 461 |||| ||||||||| ||||| Sbjct: 123956 accggcgcgcgcgtgctcgcc 123976 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 26 aaaacgccccactaaaaccccacttacg 53 |||||||||||||||||||||||||||| Sbjct: 123472 aaaacgccccactaaaaccccacttacg 123499
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 261 tgcacgacgtcgacgccggtgaaggcgtacgccaagtgcatcgcgctgccgacgcagggc 320 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4870986 tgcacgacgtcgacgccgttgaagacgtacgccaagtgcatcgcgctgccgacgcagggc 4870927 Query: 321 gcgacgctggcgtggacgtacgacgcgcgcaacgccacgctggacgcggccttcacgggg 380 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 4870926 gcgacgctggcgtggacgtacgacgcgcgcaacgcgacgctggacgcggcgttcacgggc 4870867 Query: 381 tccttcatctcgccgtcgggatgggtggcgtggggcgtcaaccaggacgcgccggccatg 440 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| Sbjct: 4870866 tccttcatctcgccgtcgggatgggtggcctggggcgtcaacaaggacgcgccggcgatg 4870807 Query: 441 gccggggcgcgcgtgatcgcc 461 |||| ||||||||| ||||| Sbjct: 4870806 accggcgcgcgcgtgctcgcc 4870786 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 26 aaaacgccccactaaaaccccacttacg 53 |||||||||||||||||||||||||||| Sbjct: 4871290 aaaacgccccactaaaaccccacttacg 4871263
>gb|AC164587.5| Mus musculus chromosome 5, clone RP24-222H12, complete sequence Length = 176841 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 13734 cacgcacactcacactcacacac 13756
>gb|AF424930.1| Loligo opalescens clone p04_8_8 microsatellite locus p04 sequence Length = 267 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 150 cacgcacactcacactcacacac 128
>gb|AF424928.1| Loligo opalescens clone p04_7_4 microsatellite locus p04 sequence Length = 275 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 150 cacgcacactcacactcacacac 128
>gb|AC144488.2| Gasterosteus aculeatus clone CH213-119K16, complete sequence Length = 217665 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 160823 cacgcacactcacactcacacac 160845
>gb|AY491785.1| Euphydryas aurinia clone EA4 microsatellite sequence Length = 293 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 176 cacgcacactcacactcacacac 198
>emb|AL356255.15| Human DNA sequence from clone RP11-400D22 on chromosome 10 Contains part of the gene for VPS10 domain receptor protein SORCS 1 and a CpG island, complete sequence Length = 116139 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 59573 cacgcacactcacactcacacac 59595
>emb|AL844607.4| Mouse DNA sequence from clone RP24-280G18 on chromosome 4, complete sequence Length = 160298 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 127648 cacgcacactcacactcacacac 127670
>gb|AC112243.5| Homo sapiens BAC clone RP11-517M22 from 4, complete sequence Length = 40933 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 28194 cacgcacactcacactcacacac 28172
>gb|AY957499.1| Bos taurus glutamate-cysteine ligase catalytic subunit (GCLC), MHC class II antigen (DSB), MHC class II antigen (DYA), MHC class II antigen (DYB), MHC class II antigen (DOB), transporter 2 ATP-binding cassette sub-family B (TAP2), proteasome subunit beta type 8 (PSMB8), transporter 1 ATP-binding cassette sub-family B (TAP1), proteosome subunit beta type 9 (PSMB9), histone H2B-like (H2B), MHC class II antigen (DMB), MHC class II antigen (DMA), bromodomain containing 2 (BRD2), MHC class II antigen (DOA), collagen type XI alpha 2 (COL11A2), retinoid X receptor beta (RXRB), solute carrier family 39 zinc transporter member 7 (HKE4), and hydroxysteroid (17-beta) dehydrogenase 8 (HKE6) genes, complete cds; and ring finger protein 1 (RING1) gene, partial cds Length = 447010 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 352582 cacgcacactcacactcacacac 352604
>dbj|AK128083.1| Homo sapiens cDNA FLJ46204 fis, clone TESTI4009501 Length = 3861 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 609 cacgcacactcacactcacacac 631
>emb|BX005385.13| Zebrafish DNA sequence from clone DKEY-180N16, complete sequence Length = 159174 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 24847 cacgcacactcacactcacacac 24869
>gb|DQ406744.1| Volvox carteri f. nagariensis Met1 (met1) gene, complete cds Length = 29854 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 25036 cacgcacactcacactcacacac 25014
>gb|AC097526.3| Homo sapiens BAC clone RP11-627H22 from 4, complete sequence Length = 144324 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 103763 cacgcacactcacactcacacac 103785
>gb|AC153596.5| Mus musculus 6 BAC RP23-305C1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 148062 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 105009 cacgcacactcacactcacacac 104987
>gb|AC161253.2| Mus musculus BAC clone RP24-165J6 from chromosome 12, complete sequence Length = 156976 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 38860 cacgcacactcacactcacacac 38838
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 20613746 cacgcacactcacactcacacac 20613768
>gb|AC107208.6| Homo sapiens BAC clone RP13-487K5 from 4, complete sequence Length = 81763 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 37259 cacgcacactcacactcacacac 37281
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 36153 cacgcacactcacactcacacac 36175
>emb|AL714024.31| Mouse DNA sequence from clone RP23-102H7 on chromosome 5, complete sequence Length = 213519 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 77791 cacgcacactcacactcacacac 77769
>gb|AC073434.42| Mus musculus strain C57BL/6J chromosome 9 clone rp23-159l13, complete sequence Length = 184073 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 95782 cacgcacactcacactcacacac 95804
>dbj|AB042997.1| Plecoglossus altivelis DNA, microsatellite, clone:Pal-5* Length = 506 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacac 106 ||||||||||||||||||||||| Sbjct: 323 cacgcacactcacactcacacac 345
>gb|AF424938.1| Loligo opalescens clone p04_388_16 microsatellite locus p04 sequence Length = 242 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacaca 105 |||||||||||||||||||||| Sbjct: 112 cacgcacactcacactcacaca 91
>gb|AC136645.2| Rattus norvegicus 7 BAC CH230-156H17 (Children's Hospital Oakland Research Institute) complete sequence Length = 204000 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacaca 105 |||||||||||||||||||||| Sbjct: 116635 cacgcacactcacactcacaca 116614
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 cgccacgctggacgcggccttc 374 |||||||||||||||||||||| Sbjct: 1920405 cgccacgctggacgcggccttc 1920384
>gb|AC162180.2| Mus musculus BAC clone RP23-126K16 from chromosome 9, complete sequence Length = 226160 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 acgcacactcacactcacacac 106 |||||||||||||||||||||| Sbjct: 114225 acgcacactcacactcacacac 114246
>gb|AC104212.3| Homo sapiens chromosome 8, clone RP11-941H19, complete sequence Length = 196806 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacaca 105 |||||||||||||||||||||| Sbjct: 25187 cacgcacactcacactcacaca 25208
>gb|AC161589.2| Mus musculus BAC clone RP24-383M20 from chromosome 9, complete sequence Length = 226186 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 acgcacactcacactcacacac 106 |||||||||||||||||||||| Sbjct: 38547 acgcacactcacactcacacac 38526
>gb|AC099028.1| Drosophila melanogaster, chromosome 2R, region 55F-56X, BAC clone BACR08F09, complete sequence Length = 192358 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgcc 109 |||||||||||||||||||||| Sbjct: 154351 cacactcacactcacacacgcc 154372
>gb|AC099016.1| Drosophila melanogaster, chromosome 2R, region 56A-56A, BAC clone BACR27C21, complete sequence Length = 173373 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgcc 109 |||||||||||||||||||||| Sbjct: 9851 cacactcacactcacacacgcc 9872 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 108533 cacactcacactcacacacgc 108513
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 ccacgcacactcacactcacac 104 |||||||||||||||||||||| Sbjct: 125197 ccacgcacactcacactcacac 125218
>gb|AC009198.8|AC009198 Drosophila melanogaster, chromosome 2L, region 33B-33C, BAC clone BACR19C12, complete sequence Length = 171134 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 acgcacactcacactcacacac 106 |||||||||||||||||||||| Sbjct: 96394 acgcacactcacactcacacac 96373
>gb|AC009686.14| Homo sapiens chromosome 8, clone RP11-92K15, complete sequence Length = 191166 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacaca 105 |||||||||||||||||||||| Sbjct: 167474 cacgcacactcacactcacaca 167495
>dbj|AK072365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061I03, full insert sequence Length = 2351 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 ccacgcacactcacactcacac 104 |||||||||||||||||||||| Sbjct: 276 ccacgcacactcacactcacac 297
>gb|AE003635.2| Drosophila melanogaster chromosome 2L, section 44 of 83 of the complete sequence Length = 308012 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 acgcacactcacactcacacac 106 |||||||||||||||||||||| Sbjct: 157365 acgcacactcacactcacacac 157344
>gb|AE003798.3| Drosophila melanogaster chromosome 2R, section 52 of 73 of the complete sequence Length = 242365 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgcc 109 |||||||||||||||||||||| Sbjct: 150815 cacactcacactcacacacgcc 150836
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 ccacgcacactcacactcacac 104 |||||||||||||||||||||| Sbjct: 125197 ccacgcacactcacactcacac 125218
>gb|AC004345.1|AC004345 Drosophila melanogaster DNA sequence (P1 DS07069 (D244)), complete sequence Length = 86419 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgcc 109 |||||||||||||||||||||| Sbjct: 62367 cacactcacactcacacacgcc 62346
>emb|BX000503.2|CNS08CDT Oryza sativa chromosome 12, . BAC OSJNBb0077A02 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131346 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 ccacgcacactcacactcacac 104 |||||||||||||||||||||| Sbjct: 125197 ccacgcacactcacactcacac 125218
>emb|BX000496.1|CNS08CDM Oryza sativa chromosome 12, . BAC OSJNBa0096E03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161808 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 ccacgcacactcacactcacac 104 |||||||||||||||||||||| Sbjct: 76806 ccacgcacactcacactcacac 76827
>gb|AC133955.4| Mus musculus BAC clone RP23-249M4 from 6, complete sequence Length = 185272 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacaca 105 |||||||||||||||||||||| Sbjct: 127510 cacgcacactcacactcacaca 127489
>gb|AF380972.1| Musca domestica microsatellite CA106 sequence Length = 501 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 419 cacactcacactcacacacgc 399
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 964527 cacactcacactcacacacgc 964547
>gb|AC159454.1| Trypanosoma brucei chromosome 7 clone RPCI93-6C8, complete sequence Length = 150601 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 75337 cacactcacactcacacacgc 75317
>gb|AC159429.1| Trypanosoma brucei chromosome 7 clone RPCI93-28B13, complete sequence Length = 152128 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 28350 cacactcacactcacacacgc 28330
>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete sequence Length = 191358 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacacgc 108 ||||||||||||||| ||||||||| Sbjct: 189130 cacgcacactcacacacacacacgc 189106
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 391 cgccgtcgggatgggtggcgtgggg 415 |||||||||||||||||||| |||| Sbjct: 3595148 cgccgtcgggatgggtggcgcgggg 3595124
>gb|AC147121.2| Mus musculus BAC clone RP24-160L14 from chromosome 7, complete sequence Length = 185191 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacac 104 ||||||||||||||||||||| Sbjct: 168613 cacgcacactcacactcacac 168633
>gb|AC158652.5| Mus musculus 6 BAC RP23-238I17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217046 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacacgc 108 ||||||||||||||| ||||||||| Sbjct: 209617 cacgcacactcacacacacacacgc 209641
>gb|AC068607.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-392C14, complete sequence Length = 218081 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacacgc 108 ||||||||||||||| ||||||||| Sbjct: 14629 cacgcacactcacacacacacacgc 14605
>gb|AC159999.6| Mus musculus BAC clone RP23-6P9 from chromosome 10, complete sequence Length = 216489 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 cacgccacgcacactcacactcacacacgccac 111 |||||||| ||||| ||||| |||||||||||| Sbjct: 88598 cacgccacacacacacacacacacacacgccac 88630
>gb|AC124552.3| Mus musculus BAC clone RP23-222M11 from chromosome 19, complete sequence Length = 237281 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacac 104 ||||||||||||||||||||| Sbjct: 84011 cacgcacactcacactcacac 84031
>gb|AC114684.10| Homo sapiens chromosome 18, clone RP11-1058N17, complete sequence Length = 196117 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 cgcacactcacactcacacac 106 ||||||||||||||||||||| Sbjct: 77000 cgcacactcacactcacacac 76980
>ref|NM_005904.2| Homo sapiens SMAD, mothers against DPP homolog 7 (Drosophila) (SMAD7), mRNA Length = 3103 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 cgcacactcacactcacacac 106 ||||||||||||||||||||| Sbjct: 1925 cgcacactcacactcacacac 1905
>gb|AY115559.1| Oryza rufipogon putative gibberellin 20 oxidase gene, complete cds Length = 4361 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 834 cacactcacactcacacacgc 854
>gb|AY115558.1| Oryza sativa (indica cultivar-group) putative gibberellin 20 oxidase (GA20) gene, complete cds Length = 3981 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 833 cacactcacactcacacacgc 853
>gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, complete sequence Length = 198636 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacacgc 108 ||||||||| ||||||||||||||| Sbjct: 130022 cacgcacacacacactcacacacgc 129998
>gb|AC161232.7| Mus musculus chromosome 3, clone RP24-369J22, complete sequence Length = 203311 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacacgc 108 ||||||||||||||| ||||||||| Sbjct: 127084 cacgcacactcacacgcacacacgc 127108
>emb|AL354796.21| Human DNA sequence from clone RP11-145E17 on chromosome 9 Contains the 5'end of a novel gene (FLJ00318), a novel gene and two CpG islands, complete sequence Length = 156466 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 76690 cacactcacactcacacacgc 76670
>emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on chromosome 9 Contains the 5' end of the ENG gene for endoglin (Osler-Rendu-Weber syndrome 1) (END, ORW, HHT1, ORW1, CD105), the AK1 gene for adenylate kinase 1, the ST6GALNAC6 gene for CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNACVI), the SIAT7D gene for sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1, 3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) (SIAT3C, ST6GALNAC4, ST6GALNACIV), the DPM2 gene for dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (MGC21559), the gene for a novel protien containing FLJ00179, a novel gene and ten CpG islands, complete sequence Length = 164201 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgccaccgcgc 116 ||||| ||||||||||||||||| ||||| Sbjct: 39583 cacacacacactcacacacgccagcgcgc 39555
>gb|AC091293.2| Takifugu rubripes clone 283N9, complete sequence Length = 147908 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 133489 cacactcacactcacacacgc 133469
>gb|AC091292.2| Takifugu rubripes clone 263O5, complete sequence Length = 103019 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 6428 cacactcacactcacacacgc 6408
>emb|BX927287.17| Zebrafish DNA sequence from clone DKEY-31N13 in linkage group 5, complete sequence Length = 153905 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacacgc 108 ||||||||| ||||||||||||||| Sbjct: 24362 cacgcacacacacactcacacacgc 24338
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 gggcgcgacgctggcgtggac 337 ||||||||||||||||||||| Sbjct: 161787 gggcgcgacgctggcgtggac 161807
>emb|CR352285.4| Zebrafish DNA sequence from clone CH211-210K13 in linkage group 11, complete sequence Length = 133334 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 125294 cacactcacactcacacacgc 125314
>emb|BX936384.22| Zebrafish DNA sequence from clone CH211-76M11 in linkage group 20 Contains seven novel genes and two CpG islands, complete sequence Length = 194634 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacac 104 ||||||||||||||||||||| Sbjct: 59419 cacgcacactcacactcacac 59399
>dbj|AK131394.1| Homo sapiens cDNA FLJ16482 fis, clone BRTHA2017972, highly similar to Homo sapiens MAD-related gene SMAD7 (SMAD7) mRNA Length = 2153 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 cgcacactcacactcacacac 106 ||||||||||||||||||||| Sbjct: 1165 cgcacactcacactcacacac 1145
>dbj|AB213477.1| Oryza glumipatula OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: GLU Length = 1798 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 833 cacactcacactcacacacgc 853
>dbj|AB213476.1| Oryza glaberrima OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: GLA Length = 1790 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 825 cacactcacactcacacacgc 845
>dbj|AB213475.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R14 Length = 1809 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 833 cacactcacactcacacacgc 853
>dbj|AB213474.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R13 Length = 1808 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 832 cacactcacactcacacacgc 852
>dbj|AB213473.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R12 Length = 1813 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 837 cacactcacactcacacacgc 857
>dbj|AB213472.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R11 Length = 1807 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 842 cacactcacactcacacacgc 862
>dbj|AB213471.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R10 Length = 1798 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 833 cacactcacactcacacacgc 853
>dbj|AB213470.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R9 Length = 1800 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 835 cacactcacactcacacacgc 855
>dbj|AB213469.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R8 Length = 1813 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 837 cacactcacactcacacacgc 857
>dbj|AB213468.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R7 Length = 1793 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 817 cacactcacactcacacacgc 837
>dbj|AB213467.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R6 Length = 1731 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 755 cacactcacactcacacacgc 775
>dbj|AB213466.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R5 Length = 1725 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 760 cacactcacactcacacacgc 780
>dbj|AB213465.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R4 Length = 1738 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 762 cacactcacactcacacacgc 782
>dbj|AB213464.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R3 Length = 1737 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 761 cacactcacactcacacacgc 781
>dbj|AB213463.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R2 Length = 1807 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 831 cacactcacactcacacacgc 851
>dbj|AB213462.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R1 Length = 1809 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 833 cacactcacactcacacacgc 853
>dbj|AB213461.1| Oryza sativa (indica cultivar-group) OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: RS1 Length = 1809 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 833 cacactcacactcacacacgc 853
>dbj|AB213460.1| Oryza sativa (indica cultivar-group) OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: S3 Length = 1808 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 832 cacactcacactcacacacgc 852
>gb|AF465256.1| Oryza sativa cultivar Milyang 23 gibberellin-20 oxidase (Sd-1) gene, complete cds Length = 6237 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 2402 cacactcacactcacacacgc 2422
>gb|AF465255.1| Oryza sativa cultivar Nipponbare gibberellin-20 oxidase (Sd-1) gene, complete cds Length = 6590 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 2359 cacactcacactcacacacgc 2379
>gb|AF026559.1|HSSMAD7S04 Homo sapiens Smad7 (SMAD7) gene, exon 4, and complete cds Length = 2501 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 cgcacactcacactcacacac 106 ||||||||||||||||||||| Sbjct: 1082 cgcacactcacactcacacac 1062
>emb|X00633.1|TBMIEX1 Trypanosoma brucei mini-exon repeat Length = 1390 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacac 104 ||||||||||||||||||||| Sbjct: 221 cacgcacactcacactcacac 241
>gb|AF256726.1|AF256726 Salmo salar clone BHMS426 microsatellite sequence Length = 434 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacacgc 108 ||||||||| ||||||||||||||| Sbjct: 165 cacgcacacacacactcacacacgc 141
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 38375654 cacactcacactcacacacgc 38375674
>gb|AF254556.1|AF254556 Oryza sativa gibberellin 20 oxidase (GA5) gene, partial sequence Length = 5575 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 2078 cacactcacactcacacacgc 2098
>gb|AY150996.1| Lobesia botrana clone F-07 T7 microsatellite sequence Length = 675 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacacgc 108 ||||||||||||||| ||||||||| Sbjct: 214 cacgcacactcacacacacacacgc 238
>gb|AC107070.4| Homo sapiens BAC clone RP11-293H4 from 2, complete sequence Length = 107972 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacacgc 108 |||||||||||||| |||||||||| Sbjct: 74042 cacgcacactcacagtcacacacgc 74018
>gb|AC092580.3| Homo sapiens BAC clone RP11-16D24 from 2, complete sequence Length = 120492 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 30790 cacactcacactcacacacgc 30770
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 136479 cacactcacactcacacacgc 136499
>dbj|AB099704.1| Mus musculus ZHX2 gene for transcription factor ZHX2, complete cds Length = 12681 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 76 acgcacgccacgcacactcacactcacacacgc 108 ||||||||||| ||||| ||||| ||||||||| Sbjct: 7555 acgcacgccacacacacacacacacacacacgc 7587
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete sequence Length = 306854 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 7192 cacactcacactcacacacgc 7172
>gb|AC174642.2| Mus musculus BAC clone RP24-362N12 from chromosome 7, complete sequence Length = 144527 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 46285 cacactcacactcacacacgc 46265
>dbj|AP002342.3| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2258N2, complete sequences Length = 174548 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacac 104 ||||||||||||||||||||| Sbjct: 41293 cacgcacactcacactcacac 41273
>gb|AC104324.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-177j21, complete sequence Length = 193277 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacacgc 108 ||||||||||||||| ||||||||| Sbjct: 62117 cacgcacactcacacacacacacgc 62141
>gb|AC122343.4| Mus musculus BAC clone RP23-359L18 from chromosome 7, complete sequence Length = 228892 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacac 104 ||||||||||||||||||||| Sbjct: 71498 cacgcacactcacactcacac 71518
>gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosome 10, complete sequence Length = 217425 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 45622 cacactcacactcacacacgc 45602
>gb|AC004298.1|AC004298 Drosophila melanogaster DNA sequence (P1 DS02599 (D184)), complete sequence Length = 81522 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 19988 cacactcacactcacacacgc 20008
>gb|AC134899.4| Mus musculus BAC clone RP24-81B7 from 6, complete sequence Length = 197316 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacacgc 108 ||||||||||||||| ||||||||| Sbjct: 70952 cacgcacactcacacacacacacgc 70928
>emb|AM086461.1| Hypophthalmichthys molitrix microsatellite DNA, clone Hmo37 Length = 245 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgc 108 ||||||||||||||||||||| Sbjct: 83 cacactcacactcacacacgc 103
>gb|AF010193.1|AF010193 Homo sapiens MAD-related gene SMAD7 (SMAD7) mRNA, complete cds Length = 3111 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 cgcacactcacactcacacac 106 ||||||||||||||||||||| Sbjct: 1933 cgcacactcacactcacacac 1913
>emb|X00683.1|TBREP4 Trypanosome 1.35 kb DNA repeat unit with conserved 35 nucleotides at 5' end of VSG (variable surface glycoprotein) mRNAs Length = 1354 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacac 104 ||||||||||||||||||||| Sbjct: 888 cacgcacactcacactcacac 908
>ref|NM_111035.3| Arabidopsis thaliana catalytic AT3G01690 mRNA, complete cds Length = 1452 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacg 107 |||||||||||||||||||| Sbjct: 1291 cacactcacactcacacacg 1310
>gb|AE010315.1| Methanopyrus kandleri AV19 section 14 of 157 of the complete genome Length = 13428 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 cgcggccttcacggggtcct 384 |||||||||||||||||||| Sbjct: 5492 cgcggccttcacggggtcct 5511
>gb|AC152495.1| Zea mays BAC clone Z486N13, complete sequence Length = 169348 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 144438 tcgttgtggtcgtcgtcctt 144457 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 59784 tcgttgtggtcgtcgtcctt 59803
>gb|AC127189.4| Rattus norvegicus 1 BAC CH230-266M16 (Children's Hospital Oakland Research Institute) complete sequence Length = 222423 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacg 107 |||||||||||||||||||| Sbjct: 154046 cacactcacactcacacacg 154065
>gb|AC114512.5| Rattus norvegicus 5 BAC CH230-5N9 (Children's Hospital Oakland Research Institute) complete sequence Length = 247588 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacacgccac 111 ||||||||||||||| ||||||| |||| Sbjct: 165524 cacgcacactcacacacacacacaccac 165551
>gb|AC134839.3| Mus musculus BAC clone RP24-362O23 from chromosome 19, complete sequence Length = 178560 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gcacactcacactcacacac 106 |||||||||||||||||||| Sbjct: 67591 gcacactcacactcacacac 67610
>gb|AC147020.2| Mus musculus BAC clone RP23-267A11 from chromosome 18, complete sequence Length = 204727 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacacgccac 111 ||||||||| ||||||||||||| |||| Sbjct: 62220 cacgcacacacacactcacacacaccac 62247
>gb|AC149031.1| Rhinolophus ferrumequinum clone VMRC7-44G7, complete sequence Length = 192138 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcaca 103 |||||||||||||||||||| Sbjct: 88839 cacgcacactcacactcaca 88820
>gb|AC139941.9| Mus musculus chromosome 13, clone RP23-78M22, complete sequence Length = 236536 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gcacactcacactcacacac 106 |||||||||||||||||||| Sbjct: 78174 gcacactcacactcacacac 78193
>gb|AC165263.2| Mus musculus BAC clone RP23-21E23 from chromosome 13, complete sequence Length = 180505 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacacg 107 ||||||||| |||||||||||||| Sbjct: 41612 cacgcacacacacactcacacacg 41635
>gb|AC112260.6| Mus musculus BAC clone RP23-185L5 from chromosome 18, complete sequence Length = 216325 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacg 107 |||||||||||||||||||| Sbjct: 67607 cacactcacactcacacacg 67588
>gb|AC095326.9| Rattus norvegicus 1 BAC CH230-89E14 (Children's Hospital Oakland Research Institute) complete sequence Length = 219914 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacg 107 |||||||||||||||||||| Sbjct: 113538 cacactcacactcacacacg 113557
>gb|AC132580.2| Mus musculus BAC clone RP24-388H18 from chromosome 9, complete sequence Length = 127200 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gcacactcacactcacacac 106 |||||||||||||||||||| Sbjct: 97585 gcacactcacactcacacac 97604
>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence, complete sequence Length = 105543 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacg 107 |||||||||||||||||||| Sbjct: 80377 cacactcacactcacacacg 80396
>gb|AC010797.4|ATAC010797 Arabidopsis thaliana chromosome III BAC F28J7 genomic sequence, complete sequence Length = 89154 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacg 107 |||||||||||||||||||| Sbjct: 3082 cacactcacactcacacacg 3101
>gb|AC125398.4| Mus musculus BAC clone RP24-217G23 from chromosome 18, complete sequence Length = 166948 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacacgccac 111 ||||||||| ||||||||||||| |||| Sbjct: 860 cacgcacacacacactcacacacaccac 833
>gb|AC129302.3| Mus musculus BAC clone RP24-441C24 from chromosome 2, complete sequence Length = 186647 Score = 40.1 bits (20), Expect = 6.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 76 acgcacgc-cacgcacactcacactcacacac 106 |||||||| ||||||||||||||| ||||||| Sbjct: 126140 acgcacgcacacgcacactcacacacacacac 126171
>gb|AC124465.6| Mus musculus BAC clone RP24-156M16 from chromosome 13, complete sequence Length = 169973 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gcacactcacactcacacac 106 |||||||||||||||||||| Sbjct: 31119 gcacactcacactcacacac 31100
>gb|AC121980.2| Mus musculus BAC clone RP24-290F15 from 1, complete sequence Length = 129142 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacg 107 |||||||||||||||||||| Sbjct: 114012 cacactcacactcacacacg 114031
>gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence Length = 213888 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 2602 tcgttgtggtcgtcgtcctt 2621
>gb|AC159983.8| Mus musculus BAC clone RP23-192C23 from chromosome 13, complete sequence Length = 193502 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gcacactcacactcacacac 106 |||||||||||||||||||| Sbjct: 109681 gcacactcacactcacacac 109662
>emb|AL358492.19| Human DNA sequence from clone RP11-340B24 on chromosome 1 Contains a heat shock 10kDa protein 1 (chaperonin 10) (HSPE1) pseudogene, the gene for a novel protein (FLJ37118, FLJ37833) and a cofilin 1 (non-muscle) (CFL1) pseudogene, complete sequence Length = 135992 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgcacactcacactcacac 104 |||||||||||||||||||| Sbjct: 2298 acgcacactcacactcacac 2279
>emb|AL354896.16| Human DNA sequence from clone RP11-512M17 on chromosome 13, complete sequence Length = 209743 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 ccccactaaaaccccacttacgag 55 ||||| |||||||||||||||||| Sbjct: 53555 ccccagtaaaaccccacttacgag 53532
>emb|AL121580.8|HSBB455A7 Human DNA sequence from clone RP13-455A7 on chromosome 22 Contains an STS and GSSs, complete sequence Length = 137139 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gcacactcacactcacacac 106 |||||||||||||||||||| Sbjct: 124007 gcacactcacactcacacac 124026
>emb|AL078624.24|HSDJ799G3 Human DNA sequence from clone RP4-799G3 on chromosome 1q42.11-42.3 Contains STSs and GSSs, complete sequence Length = 127639 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacg 107 |||||||||||||||||||| Sbjct: 38359 cacactcacactcacacacg 38340
>emb|AL080251.23|HSDJ93P18 Human DNA sequence from clone RP1-93P18 on chromosome 1p35.2-36.23 Contains the 5' end of the ALDH4A1 gene for aldehyde dehydrogenase 4 family, member A1, a novel gene and a CpG island, complete sequence Length = 103216 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gcacactcacactcacacac 106 |||||||||||||||||||| Sbjct: 65642 gcacactcacactcacacac 65623
>gb|AC166078.2| Mus musculus BAC clone RP23-13G1 from chromosome 9, complete sequence Length = 225128 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gcacactcacactcacacac 106 |||||||||||||||||||| Sbjct: 215895 gcacactcacactcacacac 215914
>emb|AL022098.1|HS510L9 Human DNA sequence from clone RP3-510L9 on chromosome 6p24.1-25.3 Contains part of the NEDD9 gene for neural precursor cell expressed (developmentally down-regulated) 9, complete sequence Length = 130753 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gcacactcacactcacacac 106 |||||||||||||||||||| Sbjct: 55102 gcacactcacactcacacac 55083
>emb|BX890604.9| Human DNA sequence from clone RP11-706O15 on chromosome X, complete sequence Length = 192469 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ttcacaatcaccctccaaaa 29 |||||||||||||||||||| Sbjct: 99211 ttcacaatcaccctccaaaa 99192 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ttcacaatcaccctccaaaa 29 |||||||||||||||||||| Sbjct: 60783 ttcacaatcaccctccaaaa 60764 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ttcacaatcaccctccaaaa 29 |||||||||||||||||||| Sbjct: 22358 ttcacaatcaccctccaaaa 22339
>gb|AC160472.4| Mus musculus BAC clone RP24-97J22 from chromosome 1, complete sequence Length = 170576 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacg 107 |||||||||||||||||||| Sbjct: 68419 cacactcacactcacacacg 68438
>emb|AJ245745.1|EFI245745 Endomyces fibuliger ura3 gene for orotidine-5'-phosphate decarboxylase Length = 3194 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcaca 103 |||||||||||||||||||| Sbjct: 2766 cacgcacactcacactcaca 2747
>gb|AC161165.5| Mus musculus chromosome 15, clone RP23-278C10, complete sequence Length = 176135 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccacgcacactcacactcacacac 106 |||||||||| ||||||||||||| Sbjct: 147292 ccacgcacacacacactcacacac 147315
>emb|AL513014.9| Mouse DNA sequence from clone RP23-461O24 on chromosome 13 Contains the 5' end of the gene for a novel protein similar to C6orf32 (KIAA0386, DIFF48), complete sequence Length = 80460 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 ccacgcacactcacactcacacac 106 |||| ||||||||||||||||||| Sbjct: 14178 ccacacacactcacactcacacac 14155
>gb|AC165178.2| Zea mays clone ZMMBBb-272P17, complete sequence Length = 131485 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 111550 tcgttgtggtcgtcgtcctt 111569
>gb|AC008735.9| Homo sapiens chromosome 19 clone CTD-2537I9, complete sequence Length = 223879 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacacg 107 |||||||||||||||||| ||||| Sbjct: 148470 cacgcacactcacactcagacacg 148447
>gb|AC091782.5| Genomic sequence for Mus musculus, clone RP23-103P23, complete sequence Length = 195574 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gcacactcacactcacacac 106 |||||||||||||||||||| Sbjct: 109647 gcacactcacactcacacac 109628
>emb|X92518.1|HSHMGICP H.sapiens mRNA for HMGI-C protein Length = 4633 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccacgcacactcacactcacacac 106 |||| ||||||||||||||||||| Sbjct: 462 ccacacacactcacactcacacac 485
>gb|AC105292.3| Drosophila melanogaster X BAC RP98-18F10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 161360 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 79 cacgccacgcacactcacactcacacac 106 |||| ||||||||||||||| ||||||| Sbjct: 76074 cacgacacgcacactcacacacacacac 76047
>gb|AC108475.5| Homo sapiens BAC clone RP11-1365D11 from 4, complete sequence Length = 51975 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gcacactcacactcacacac 106 |||||||||||||||||||| Sbjct: 39648 gcacactcacactcacacac 39629
>gb|AC069078.5| Homo sapiens chromosome 10 clone RP11-492B17, complete sequence Length = 187669 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccacgcacactcacactcacacac 106 |||| ||||||||||||||||||| Sbjct: 148938 ccacacacactcacactcacacac 148961
>gb|AC158994.4| Mus musculus BAC clone RP24-79P8 from chromosome 5, complete sequence Length = 201330 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacacg 107 ||||||||| |||||||||||||| Sbjct: 131925 cacgcacacacacactcacacacg 131948
>gb|AC165267.2| Zea mays clone ZMMBBb-151F20, complete sequence Length = 115478 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 37965 tcgttgtggtcgtcgtcctt 37984
>gb|AC152416.2| Mus musculus BAC clone RP23-352L15 from chromosome 5, complete sequence Length = 204014 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacacg 107 ||||||||| |||||||||||||| Sbjct: 46736 cacgcacacacacactcacacacg 46759
>gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, complete sequence Length = 227950 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacacg 107 ||||||||||||||| |||||||| Sbjct: 186556 cacgcacactcacacacacacacg 186579
>dbj|AK047209.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930036C08 product:unclassifiable, full insert sequence Length = 2005 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgccac 111 ||||||||||||||||||| |||| Sbjct: 1582 cacactcacactcacacacaccac 1605
>emb|BX823457.1|CNS0A4RS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS40ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1389 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacg 107 |||||||||||||||||||| Sbjct: 1228 cacactcacactcacacacg 1247
>gb|AC009740.4|AC009740 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone BACR24C01, complete sequence Length = 181480 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 acgcacactcacactcacacacgc 108 |||||||||||||| ||||||||| Sbjct: 71004 acgcacactcacacacacacacgc 71027
>gb|AC116374.10| Mus musculus chromosome 1, clone RP23-294I9, complete sequence Length = 179835 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacacg 107 ||||||||||||||| |||||||| Sbjct: 40258 cacgcacactcacacacacacacg 40281
>gb|AC114302.3| Homo sapiens chromosome 5 clone RP11-153N15, complete sequence Length = 145327 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 ccacgcacactcacactcacacac 106 |||||||||| ||||||||||||| Sbjct: 49229 ccacgcacacacacactcacacac 49206
>gb|AC093279.3| Homo sapiens chromosome 5 clone RP11-3M7, complete sequence Length = 153538 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 ccacgcacactcacactcacacac 106 |||||||||| ||||||||||||| Sbjct: 86142 ccacgcacacacacactcacacac 86119
>gb|AC160211.1| Genomic seqeunce for Zea mays BAC clone ZMMBBb0448F23, complete sequence Length = 132549 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 125225 tcgttgtggtcgtcgtcctt 125244
>gb|AC107308.7| Homo sapiens 12 BAC RP11-677M24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 98485 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccacgcacactcacactcacacac 106 |||| ||||||||||||||||||| Sbjct: 68167 ccacacacactcacactcacacac 68190
>gb|AC138853.2| Homo sapiens chromosome 5 clone RP11-1325J9, complete sequence Length = 174039 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 ccacgcacactcacactcacacac 106 |||||||||| ||||||||||||| Sbjct: 119269 ccacgcacacacacactcacacac 119246
>gb|AC100791.15| Homo sapiens chromosome 17, clone RP11-353N14, complete sequence Length = 215313 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 cacgcacactcacactcacacacg 107 ||||||||||||||| |||||||| Sbjct: 76668 cacgcacactcacacacacacacg 76645
>gb|AF546189.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family from Zea mays, complete sequence Length = 116115 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 54604 tcgttgtggtcgtcgtcctt 54585
>gb|AF546188.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family from Zea mays, complete sequence Length = 203363 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 94108 tcgttgtggtcgtcgtcctt 94089
>gb|BT002425.1| Arabidopsis thaliana unknown protein (At3g01690) mRNA, complete cds Length = 1363 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacg 107 |||||||||||||||||||| Sbjct: 1220 cacactcacactcacacacg 1239
>gb|AF466932.1| Zea mays clone BAC 206C17, complete sequence Length = 99156 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 41049 tcgttgtggtcgtcgtcctt 41030
>gb|AF466931.1| Zea mays clone BAC 163K15, complete sequence Length = 95078 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 50705 tcgttgtggtcgtcgtcctt 50686
>emb|AJ332736.1|HSA332736 Homo sapiens genomic sequence surrounding NotI site, clone NR1-QK8RS Length = 594 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacacg 107 |||||||||||||| ||||||||| Sbjct: 128 cacgcacactcacaatcacacacg 151
>emb|Z60064.1|HS187C6R H.sapiens CpG island DNA genomic Mse1 fragment, clone 187c6, reverse read cpg187c6.rt1a Length = 302 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacacg 107 ||||||||||||||| |||||||| Sbjct: 44 cacgcacactcacacacacacacg 67
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 427 acgcgccggccatggccggggcgcgcgt 454 ||||| |||| ||||||||||||||||| Sbjct: 1159705 acgcggcggcgatggccggggcgcgcgt 1159732
>gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S ribosomal protein S8 (Z214A02.25), and putative casein kinase I (Z214A02.27) genes, complete cds Length = 158797 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 68123 tcgttgtggtcgtcgtcctt 68104
>gb|AY555142.1| Zea mays BAC clone c573F08, complete sequence Length = 181627 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 115182 tcgttgtggtcgtcgtcctt 115201
>gb|AC157776.1| Zea mays chromosome 8 BAC clone ZMMBBb0483G05, complete sequence Length = 147470 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 24736 tcgttgtggtcgtcgtcctt 24717
>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cds Length = 160480 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 76072 tcgttgtggtcgtcgtcctt 76091
>gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210862 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 67 cccaacccaacgcacgccacgcacactcacactcacacac 106 ||||||||||| ||| |||| ||||| ||||| ||||||| Sbjct: 150882 cccaacccaacacacaccacacacacacacacacacacac 150843
>gb|AC004114.1|AC004114 Drosophila melanogaster, chromosome X, region 8E3-8E4, P1 clone DS05468, complete sequence Length = 75307 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 79 cacgccacgcacactcacactcacacac 106 |||| ||||||||||||||| ||||||| Sbjct: 20102 cacgacacgcacactcacacacacacac 20075
>gb|AE003692.3| Drosophila melanogaster chromosome 3R, section 30 of 118 of the complete sequence Length = 227847 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 acgcacactcacactcacacacgc 108 |||||||||||||| ||||||||| Sbjct: 32020 acgcacactcacacacacacacgc 32043
>gb|AE003447.5| Drosophila melanogaster chromosome X, section 31 of 74 of the complete sequence Length = 288721 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 79 cacgccacgcacactcacactcacacac 106 |||| ||||||||||||||| ||||||| Sbjct: 192481 cacgacacgcacactcacacacacacac 192508
>gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, complete cds; Fourf copia_LTR and Huck gypsy_LTR retrotransposons, complete sequence; Opie2 copia_LTR retrotransposon Zeon gypsy_LTR and Opie1 copia_LTR retrotransposons, complete sequence; Ji copia_LTR retrotransposon, complete sequence; and unknown protein (adh1B), cyclin H-1 (adh1C), unknown protein (adh1D), hypothetical protein (adh1E), and unknown protein (adh1F) genes, complete cds Length = 126039 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tcgttgtggtcgtcgtcctt 221 |||||||||||||||||||| Sbjct: 60843 tcgttgtggtcgtcgtcctt 60862
>gb|AC083892.19| Mus musculus strain C57BL/6J chromosome 1 clone rp23-116m12, complete sequence Length = 190588 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cacactcacactcacacacgccac 111 ||||||||||| |||||||||||| Sbjct: 40534 cacactcacacacacacacgccac 40557
>gb|AC150407.2| Branchiostoma floridae clone CH302-54J24, complete sequence Length = 175896 Score = 40.1 bits (20), Expect = 6.2 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 71 acccaacgcacgccacgcacactcacactcacacac 106 ||||||||||||| || ||||||||||| ||||||| Sbjct: 31570 acccaacgcacgc-acacacactcacacgcacacac 31604
>gb|AC163671.5| Mus musculus BAC clone RP23-21K2 from chromosome 3, complete sequence Length = 215382 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccacgcacactcacactcacacac 106 |||| ||||||||||||||||||| Sbjct: 50455 ccactcacactcacactcacacac 50478
>gb|AC148983.2| Mus musculus BAC clone RP23-189G7 from 18, complete sequence Length = 212564 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cacactcacactcacacacg 107 |||||||||||||||||||| Sbjct: 90773 cacactcacactcacacacg 90792
>gb|AC147631.3| Mus musculus BAC clone RP23-341H6 from 9, complete sequence Length = 169769 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gcacactcacactcacacac 106 |||||||||||||||||||| Sbjct: 56859 gcacactcacactcacacac 56878
>emb|AL928589.11| Mouse DNA sequence from clone RP23-350C1 on chromosome 2, complete sequence Length = 209053 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 cacgcacactcacactcaca 103 |||||||||||||||||||| Sbjct: 132358 cacgcacactcacactcaca 132377
>dbj|AB217222.1| Equus caballus DNA, microsatellite TKY3279 Length = 351 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cacactcacactcacacacg 107 |||||||||||||||||||| Sbjct: 286 cacactcacactcacacacg 267
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 ccacgcacactcacactcacacac 106 ||||||||| |||||||||||||| Sbjct: 1304314 ccacgcacaatcacactcacacac 1304291
>gb|L41044.1|HUMHMGIC01 Homo sapiens high-mobility group phosphoprotein (HMGI-C) gene, exons 1-3, complete cds Length = 16727 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccacgcacactcacactcacacac 106 |||| ||||||||||||||||||| Sbjct: 2084 ccacacacactcacactcacacac 2107
>emb|AL928739.5| Mouse DNA sequence from clone RP23-409L24 on chromosome 2, complete sequence Length = 153028 Score = 40.1 bits (20), Expect = 6.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 76 acgcacgc-cacgcacactcacactcacacac 106 |||||||| ||||||||||||||| ||||||| Sbjct: 106172 acgcacgcacacgcacactcacacacacacac 106141
>gb|U28750.1|HSHMGICG1 Human high-mobility group phosphoprotein isoform I-C (HMGIC) gene, exon 1 Length = 2701 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccacgcacactcacactcacacac 106 |||| ||||||||||||||||||| Sbjct: 1403 ccacacacactcacactcacacac 1426
>emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chromosome 2, complete sequence Length = 190994 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgccac 111 |||||||||||||||||| ||||| Sbjct: 17017 cacactcacactcacacaggccac 16994
>gb|AC170806.2| Mus musculus BAC clone RP24-363P6 from chromosome 8, complete sequence Length = 182564 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cacactcacactcacacacgccac 111 ||||||||||||||||||| |||| Sbjct: 25201 cacactcacactcacacacaccac 25178
>emb|AL928680.5| Mouse DNA sequence from clone RP23-396N6 on chromosome 2, complete sequence Length = 217726 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cacgcacactcacactcaca 103 |||||||||||||||||||| Sbjct: 158619 cacgcacactcacactcaca 158600
>emb|AL732480.12| Mouse DNA sequence from clone RP23-11N21 on chromosome 4, complete sequence Length = 209063 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 cacgcacactcacactcacacacg 107 ||||||||||||||| |||||||| Sbjct: 105447 cacgcacactcacacacacacacg 105470
>dbj|AP003159.1| Homo sapiens genomic DNA, chromosome 1p36 clone:1024F16, complete sequence Length = 113733 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gcacactcacactcacacac 106 |||||||||||||||||||| Sbjct: 66762 gcacactcacactcacacac 66743 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,457,286 Number of Sequences: 3902068 Number of extensions: 2457286 Number of successful extensions: 111539 Number of sequences better than 10.0: 198 Number of HSP's better than 10.0 without gapping: 195 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 110337 Number of HSP's gapped (non-prelim): 1203 length of query: 461 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 439 effective length of database: 17,147,199,772 effective search space: 7527620699908 effective search space used: 7527620699908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
