ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet14h12 |
|---|---|
| Clone Library Name | barley_pub |
>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 325 Score = 158 bits (400), Expect = 3e-39 Identities = 83/87 (95%), Positives = 85/87 (97%) Frame = +1 Query: 49 MAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCADAA 228 MAASLQAAAT+MPAKIGGRASS RPSSHVARAFGVDA ARITCSLQSDIREVASKCADAA Sbjct: 1 MAASLQAAATVMPAKIGGRASSARPSSHVARAFGVDAGARITCSLQSDIREVASKCADAA 60 Query: 229 KMAGFALATSALLVSGASAEGAPKRLT 309 KMAGFALATSALLVSGA+AEGAPKRLT Sbjct: 61 KMAGFALATSALLVSGATAEGAPKRLT 87
>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 116 bits (290), Expect = 2e-26 Identities = 59/90 (65%), Positives = 76/90 (84%), Gaps = 3/90 (3%) Frame = +1 Query: 49 MAASLQAAATLMPAKIGGRASS-VRPSSHVARAFGVD--AAARITCSLQSDIREVASKCA 219 MA+SLQAAATL+PAK+G A + +R +SH+++AFG D A R+TCS+ SD+R++A KC Sbjct: 1 MASSLQAAATLIPAKVGAPARTHLRSNSHLSKAFGFDNSTAGRLTCSINSDLRDIAQKCT 60 Query: 220 DAAKMAGFALATSALLVSGASAEGAPKRLT 309 DAAK+AGFALATSAL++SGASAEG PKRLT Sbjct: 61 DAAKLAGFALATSALVISGASAEGVPKRLT 90
>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 107 bits (266), Expect = 1e-23 Identities = 59/90 (65%), Positives = 75/90 (83%), Gaps = 3/90 (3%) Frame = +1 Query: 49 MAASLQAAATLM-PAKIGGRAS-SVRPSSHVARAFGVD-AAARITCSLQSDIREVASKCA 219 MAASLQAAATLM P K+G R + +R + V++AFGV+ + R+TCSLQ++I+E+A KC Sbjct: 1 MAASLQAAATLMQPTKVGVRNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCT 60 Query: 220 DAAKMAGFALATSALLVSGASAEGAPKRLT 309 DAAK+AGFALATSAL+VSGA+AEG PKRLT Sbjct: 61 DAAKIAGFALATSALVVSGANAEGVPKRLT 90
>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 333 Score = 106 bits (265), Expect = 1e-23 Identities = 58/93 (62%), Positives = 77/93 (82%), Gaps = 6/93 (6%) Frame = +1 Query: 49 MAASLQAAATLM-PAKIGGRAS----SVRPSSHVARAFGVD-AAARITCSLQSDIREVAS 210 MAASLQAAATLM P K+GG ++ +R S V++AFG++ +A+R++CSLQ+D+++ A Sbjct: 1 MAASLQAAATLMQPTKVGGVSARNNLQLRSSQSVSKAFGLEPSASRLSCSLQTDLKDFAQ 60 Query: 211 KCADAAKMAGFALATSALLVSGASAEGAPKRLT 309 KC DAAK+AGFALATSAL+VSGA+AEG PKRLT Sbjct: 61 KCTDAAKIAGFALATSALVVSGANAEGVPKRLT 93
>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 105 bits (261), Expect = 4e-23 Identities = 56/89 (62%), Positives = 72/89 (80%), Gaps = 2/89 (2%) Frame = +1 Query: 49 MAASLQAAATLM-PAKIGGRASSVRPSSHVARAFGVDA-AARITCSLQSDIREVASKCAD 222 MAASLQAAATLM P K+ ++ + V++AFG++ A++TCSLQSD +E+A KC + Sbjct: 1 MAASLQAAATLMQPTKLRSNTLQLKSNQSVSKAFGLEHYGAKVTCSLQSDFKELAHKCVE 60 Query: 223 AAKMAGFALATSALLVSGASAEGAPKRLT 309 A+K+AGFALATSAL+VSGASAEGAPKRLT Sbjct: 61 ASKIAGFALATSALVVSGASAEGAPKRLT 89
>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 331 Score = 102 bits (254), Expect = 2e-22 Identities = 58/92 (63%), Positives = 72/92 (78%), Gaps = 5/92 (5%) Frame = +1 Query: 49 MAASLQAAAT-LMPAKIGGRASS---VRPSSHVARAFGVDAA-ARITCSLQSDIREVASK 213 MA SLQAAAT L PAKI S +R + V ++FG+D++ AR+TCSL SD+++ A K Sbjct: 1 MATSLQAAATFLQPAKIAASPSRNVHLRSNQTVGKSFGLDSSQARLTCSLHSDLKDFAGK 60 Query: 214 CADAAKMAGFALATSALLVSGASAEGAPKRLT 309 C+DAAK+AGFALATSAL+VSGA AEGAPKRLT Sbjct: 61 CSDAAKIAGFALATSALVVSGAGAEGAPKRLT 92
>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 102 bits (253), Expect = 3e-22 Identities = 58/93 (62%), Positives = 75/93 (80%), Gaps = 6/93 (6%) Frame = +1 Query: 49 MAASLQAAATLM-PAKIGGRAS----SVRPSSHVARAFGVD-AAARITCSLQSDIREVAS 210 MAASLQAAATLM P K+G + +R + V++AFGV+ AAAR+TCSLQ++++++A Sbjct: 1 MAASLQAAATLMQPTKVGVAPARNNLQLRSAQSVSKAFGVEPAAARLTCSLQTELKDLAQ 60 Query: 211 KCADAAKMAGFALATSALLVSGASAEGAPKRLT 309 K DAAK+AGFALATSAL+VSGA+AEG PKRLT Sbjct: 61 KFTDAAKVAGFALATSALVVSGANAEGVPKRLT 93
>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 94.7 bits (234), Expect = 5e-20 Identities = 56/93 (60%), Positives = 71/93 (76%), Gaps = 6/93 (6%) Frame = +1 Query: 49 MAASLQAAAT-LMPAKIG---GRASS-VRPSSHVARAFGVD-AAARITCSLQSDIREVAS 210 MAASLQ+ AT L AKI R SS +R + V ++FG++ ++AR+TCS QSD ++ Sbjct: 1 MAASLQSTATFLQSAKIATAPSRGSSHLRSTQAVGKSFGLETSSARLTCSFQSDFKDFTG 60 Query: 211 KCADAAKMAGFALATSALLVSGASAEGAPKRLT 309 KC+DA K+AGFALATSAL+VSGASAEGAPKRLT Sbjct: 61 KCSDAVKIAGFALATSALVVSGASAEGAPKRLT 93
>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 87.8 bits (216), Expect = 6e-18 Identities = 51/92 (55%), Positives = 70/92 (76%), Gaps = 5/92 (5%) Frame = +1 Query: 49 MAASLQAAAT-LMPAKIGGRAS-SVRPSSHVARAFGVDAAA---RITCSLQSDIREVASK 213 MAASLQA+ T L P K+ R + +R + +V +AFGV++A+ R++ SLQSD++E+A+K Sbjct: 1 MAASLQASTTFLQPTKVASRNTLQLRSTQNVCKAFGVESASSGGRLSLSLQSDLKELANK 60 Query: 214 CADAAKMAGFALATSALLVSGASAEGAPKRLT 309 C DA K+AG ALATSAL+ SGA+AEG KRLT Sbjct: 61 CVDATKLAGLALATSALIASGANAEGG-KRLT 91
>5E5_RAT (Q63003) 5E5 antigen| Length = 825 Score = 33.5 bits (75), Expect = 0.14 Identities = 26/68 (38%), Positives = 29/68 (42%), Gaps = 3/68 (4%) Frame = -2 Query: 261 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHG---GGPAADL 91 G G G GG G GL G R+ GS A R G+ RRR HG G A Sbjct: 577 GGGAGASGGGRGGRGRGRGGRRGSGLSGTREDAGSPSARR-GEQRRRGHGPPAAGAAQVS 635 Query: 90 GRHQRGRG 67 R +R RG Sbjct: 636 TRGRRARG 643
>LRFN4_HUMAN (Q6PJG9) Leucine-rich repeat and fibronectin type-III| domain-containing protein 4 precursor Length = 635 Score = 33.1 bits (74), Expect = 0.18 Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Frame = -2 Query: 303 PLGRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGA--RDPGGSVD 151 P RP R+C+ D GC G A LGG A GL GA R GGS + Sbjct: 576 PPPRPQRSCSLDLGDAGCYGYARRLGGAWARRSHSVHGGLLGAGCRGVGGSAE 628
>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor| Length = 1022 Score = 32.3 bits (72), Expect = 0.31 Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 6/72 (8%) Frame = -2 Query: 267 EEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGG--GPAAD 94 E RG GE G+ G G D GL G R P G+V PG++ R G GP D Sbjct: 450 EGPRGLPGEVGNKGARG-------DQGLPGPRGPTGAVG--EPGNIGSRGDPGDLGPRGD 500 Query: 93 LG----RHQRGR 70 G + RGR Sbjct: 501 AGPPGPKGDRGR 512
>ZDH18_HUMAN (Q9NUE0) Palmitoyltransferase ZDHHC18 (EC 2.3.1.-) (Zinc finger| DHHC domain-containing protein 18) (DHHC-18) Length = 388 Score = 31.6 bits (70), Expect = 0.53 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 5/39 (12%) Frame = +2 Query: 134 SPGRSASTLPPGSRAP---CNPTSGRSQA--SAPTPPRW 235 SPG + PG+R P +PT G A +AP PPRW Sbjct: 10 SPGAAPLPASPGARRPGPAASPTPGPGPAPPAAPAPPRW 48
>CTAG2_HUMAN (O75638) Cancer/testis antigen 2 (L antigen family member 1)| (LAGE-1 protein) (ESO-2 protein) Length = 210 Score = 31.2 bits (69), Expect = 0.69 Identities = 26/74 (35%), Positives = 29/74 (39%), Gaps = 14/74 (18%) Frame = -2 Query: 264 EGRGCEGEAGHLGGVGALACDLPD-----------VGLQGARDP--GGSVDAERP-GDVR 127 EGRG G G G G +PD G G R P G+ A P G Sbjct: 4 EGRGTGGSTGDADGPGGPG--IPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPRGGAP 61 Query: 126 RRPHGGGPAADLGR 85 R PHGG +A GR Sbjct: 62 RGPHGGAASAQDGR 75
>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor| Length = 684 Score = 31.2 bits (69), Expect = 0.69 Identities = 27/67 (40%), Positives = 28/67 (41%), Gaps = 11/67 (16%) Frame = -2 Query: 255 GCEGEAGHLGGVGALACDLPD-----VGLQGAR----DPGGSVDAERPGDVRRRPHGG-- 109 G GEAGH G GAL P G QG + DPG GDV R GG Sbjct: 376 GERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPGPQGLRGDVGDRGPGGAA 435 Query: 108 GPAADLG 88 GP D G Sbjct: 436 GPKGDQG 442
>PG34_MYCTU (Q50594) Hypothetical PE-PGRS family protein PE_PGRS34| Length = 515 Score = 30.8 bits (68), Expect = 0.90 Identities = 26/82 (31%), Positives = 30/82 (36%) Frame = -2 Query: 261 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGRH 82 G G G AG GG G L G G P G+ D GD R + GG +G Sbjct: 228 GLGKAGFAGGAGGTGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGN-GGDGGSVGAA 286 Query: 81 QRGRGLERRCHVGRWAWYAGRS 16 G G G W + G S Sbjct: 287 PTGIGNGGNGGNGGWLYGDGGS 308
>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1| Length = 468 Score = 30.4 bits (67), Expect = 1.2 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 6/56 (10%) Frame = +1 Query: 1 NHE*DRSSRVPSPPTNMAASLQAAATLMPAKIGGRASSVR------PSSHVARAFG 150 +H + VP PP + + +LMP + GG +SS+R P S++ A+G Sbjct: 160 HHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSYMQGAYG 215
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 30.4 bits (67), Expect = 1.2 Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Frame = -2 Query: 165 GGSVDAERPGDVRRRPHGG--GPAADLGRHQRGRG--LERRCHVGRWAWYAG 22 G ++ A PG +R R GG G GR RGRG RR G W AG Sbjct: 1378 GAALPARGPGGLRGRGRGGRGGGGGGGGRGPRGRGGRRRRRWRPGAGEWGAG 1429 Score = 27.3 bits (59), Expect = 10.0 Identities = 28/79 (35%), Positives = 30/79 (37%), Gaps = 10/79 (12%) Frame = -2 Query: 261 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERP----------GDVRRRPHG 112 G G EG+ G GG G D P R P P G RRR G Sbjct: 251 GEGGEGDRGTAGG-GEGDRDDPPPPSPPPRPPPPLPPPPPPPPPPQPPPAGGSARRRRRG 309 Query: 111 GGPAADLGRHQRGRGLERR 55 GGP GR R RG +RR Sbjct: 310 GGPP---GRGGRRRGGKRR 325
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 30.4 bits (67), Expect = 1.2 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 8/65 (12%) Frame = -2 Query: 255 GCEGEAGHLGGVGAL-----ACDLPDVGLQGAR-DPGGSVDAERPGDVRRRPHGGGP--A 100 G +GE GH+G +G + A + D GL G + PG D PG + H G P A Sbjct: 1397 GPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGDPGPPGPIGSLGHPGPPGVA 1456 Query: 99 ADLGR 85 LG+ Sbjct: 1457 GPLGQ 1461
>CRP_MOUSE (P14847) C-reactive protein precursor| Length = 225 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = +1 Query: 22 SRVPSPPTNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAA 162 S +P PT++ AS ++A ++ I G+A VR S H G DA+ Sbjct: 106 SEIPEAPTHICASWESATGIVEFWIDGKA-KVRKSLHKGYTVGPDAS 151
>FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related protein FKHL7)| (Forkhead-related transcription factor 3) (FREAC-3) Length = 553 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = -2 Query: 261 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAAD 94 G G G AG GG G C+L + L A + GG + G GG A D Sbjct: 377 GGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGG-------AGGSAVD 425
>CAF1_EPHMU (P18856) Collagen EMF1-alpha precursor (Fibrillar collagen)| (Fragment) Length = 547 Score = 30.0 bits (66), Expect = 1.5 Identities = 21/58 (36%), Positives = 29/58 (50%) Frame = -2 Query: 258 RGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGR 85 +G +GE G L G+ + G G P G+ A +PG +R +P GP DLGR Sbjct: 27 QGPDGEPG-LPGLPGQSGKSGASGQPGVPGPVGA--AGKPGSIRGQPGPPGPPGDLGR 81
>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor| Length = 675 Score = 30.0 bits (66), Expect = 1.5 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Frame = -2 Query: 255 GCEGEAGHLGGVGALACDLPDVGLQGARDPGG---SVDAERPGDVRRRPHGGGPAADLG 88 G +G GH GG G + + + G G P G SV + P +R P GPA D G Sbjct: 186 GFKGHTGHKGGPGEIGKE-GEKGSPGPPGPPGIPGSVGLQGPRGLRGLPGPMGPAGDRG 243
>AVEN_HUMAN (Q9NQS1) Cell death regulator Aven| Length = 362 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = -2 Query: 180 GARDPGGSVDAERPG---DVRRRPHGGGPAADLGRHQRGRG 67 G PGG +ERPG V R GGG GR RGRG Sbjct: 16 GRGRPGGDRHSERPGAAAAVARGGGGGGGGDGGGRRGRGRG 56
>SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)| Length = 747 Score = 29.6 bits (65), Expect = 2.0 Identities = 21/65 (32%), Positives = 28/65 (43%) Frame = -2 Query: 261 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGRH 82 G +G G LGG GA +G QGA G+ A G + +GG + GR Sbjct: 11 GGAGQGGYGGLGGQGAGQGGYGGLGGQGAGQGAGAAAAAAAGGAGQGGYGGLGSQGAGRG 70 Query: 81 QRGRG 67 +G G Sbjct: 71 GQGAG 75
>XYNA_ASPKA (P33559) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase| A) (1,4-beta-D-xylan xylanohydrolase A) Length = 327 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -3 Query: 164 AAASTPNARATCDDGRTEEARPPILAG-ISVAAAWRDAAMLVGGLGTR 24 A A+ PNA+ +D + A P LAG +S W +A + + G+G++ Sbjct: 186 ARAADPNAKLYINDYNLDSASYPKLAGMVSHVKKWIEAGIPIDGIGSQ 233
>LRFN4_MOUSE (Q80XU8) Leucine-rich repeat and fibronectin type-III| domain-containing protein 4 precursor Length = 636 Score = 29.6 bits (65), Expect = 2.0 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Frame = -2 Query: 303 PLGRPLRTCARD-EEGRGCEGEAGHLGGVGALACDLPDVGLQGA--RDPGGSVD 151 P RP R+C+ D + GC G A LGG A GL GA R GGS + Sbjct: 576 PPPRPQRSCSLDLGDTGGCYGYARRLGGAWARRSHSVHGGLLGAGCRGVGGSAE 629
>KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C member 3| (Voltage-gated potassium channel subunit Kv3.3) (KSHIIID) Length = 757 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/37 (43%), Positives = 17/37 (45%) Frame = -2 Query: 177 ARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGRG 67 A P G PG R P G PAA +GRH G G Sbjct: 49 AASPAGPPAPRGPGGRRAEPCPGLPAAAMGRHGGGGG 85
>FA21C_HUMAN (Q9Y4E1) Protein FAM21C| Length = 1320 Score = 29.6 bits (65), Expect = 2.0 Identities = 22/73 (30%), Positives = 35/73 (47%) Frame = +1 Query: 43 TNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCAD 222 ++ +AS A+L+P K+ S FG AA + T SLQ+ RE +K ++ Sbjct: 549 SSQSASNLKGASLLPGKLPTSVSLFDDEDEEDNLFGGTAAKKQTLSLQAQ-REEKAKASE 607 Query: 223 AAKMAGFALATSA 261 +K AL S+ Sbjct: 608 LSKKKASALLFSS 620
>IGSF8_MOUSE (Q8R366) Immunoglobulin superfamily member 8 precursor (CD81| partner 3) (Glu-Trp-Ile EWI motif containing protein 2) (EWI-2) (Keratinocytes-associated transmembrane protein 4) (KCT-4) (Prostaglandin regulatory-like protein) (CD316 antigen) Length = 611 Score = 29.6 bits (65), Expect = 2.0 Identities = 24/59 (40%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Frame = -2 Query: 273 RDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAE--RPGDVRRRPHGGGP 103 R EEG G A +GGVG V G R GG V E P R R HG GP Sbjct: 481 RPEEGELSSGPAQLVGGVGQ-----DGVAELGVRPGGGPVSVELVGPRSHRLRLHGLGP 534
>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556| Length = 348 Score = 26.6 bits (57), Expect(2) = 2.2 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 4/41 (9%) Frame = +1 Query: 31 PSPPTNMAASLQAAATLMPA--KIGGRA--SSVRPSSHVAR 141 P PP + A+S QAAA P+ ++ R S+ RPSS AR Sbjct: 235 PRPPASSASSPQAAAPAAPSATRLPRRTTPSAPRPSSRPAR 275 Score = 21.6 bits (44), Expect(2) = 2.2 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 3/32 (9%) Frame = +2 Query: 143 RSASTLPPGSRAPCNPTSGRSQAS---APTPP 229 R+ + P R P PT R +A+ +P PP Sbjct: 300 RAPAGCSPARRTPSAPTDRRCRAARRGSPRPP 331
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 29.3 bits (64), Expect = 2.6 Identities = 22/64 (34%), Positives = 23/64 (35%) Frame = -2 Query: 297 GRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRP 118 GRP R GR G G+ GG GA PG A G R RP Sbjct: 272 GRPGRPGGAPGAGRPGGGGGGYRGGGGA---------------PGAGAGAPAGGGFRGRP 316 Query: 117 HGGG 106 GGG Sbjct: 317 GGGG 320
>ADRB1_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) Length = 480 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/39 (46%), Positives = 20/39 (51%) Frame = +1 Query: 22 SRVPSPPTNMAASLQAAATLMPAKIGGRASSVRPSSHVA 138 S VP+PP AAAT P + GRA RPS VA Sbjct: 282 SPVPAPPPGPPRPAAAAATTAPL-VNGRAGKRRPSRLVA 319
>RP1L1_MOUSE (Q8CGM2) Retinitis pigmentosa 1-like 1 protein (Retinitis pigmentosa| 1-like protein 1) Length = 1859 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = +1 Query: 40 PTNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITC 177 PT +AAS Q L+ +K G +S SS VA+ A A I C Sbjct: 1044 PTKVAASTQIMKALLGSKPGRPSSLPEVSSTVAQRLSSSAGAFIAC 1089
>FA21C_PONPY (Q5RDC1) Protein FAM21C| Length = 1340 Score = 29.3 bits (64), Expect = 2.6 Identities = 23/73 (31%), Positives = 33/73 (45%) Frame = +1 Query: 43 TNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCAD 222 ++ +AS A L+P K+ S FG AA R T SLQ+ E A K ++ Sbjct: 548 SSQSASKLKGAPLLPGKLPTSVSLFEDEDEEDNLFGGTAAKRQTLSLQAQGEEKA-KASE 606 Query: 223 AAKMAGFALATSA 261 +K AL S+ Sbjct: 607 LSKKKASALLFSS 619
>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3223 Score = 28.9 bits (63), Expect = 3.4 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -2 Query: 177 ARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGRG 67 A P AE+PGD RP GPA GR + G G Sbjct: 552 AAQPPSPSSAEKPGDEPGRPRSRGPA---GRTEPGEG 585
>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)| Length = 1008 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +2 Query: 134 SPGRSASTLPPGSRAPCNPTSGRS-QASAPTPPR 232 SP A+ PPG R N T S +ASAP PPR Sbjct: 776 SPCPEAAAPPPGPRTRDNFTKAPSWEASAPPPPR 809
>VGLD_BHV1P (P24906) Glycoprotein D precursor (Glycoprotein IV)| Length = 417 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 8/54 (14%) Frame = -2 Query: 276 ARDEEGR------GCEGEAGHLGGVGALACDLPDV--GLQGARDPGGSVDAERP 139 AR++EG G EG G G G P+ G +G PG S DA+RP Sbjct: 283 AREDEGETEDGAAGREGNGGPPGPEGDGESQTPEANGGAEGEPKPGPSPDADRP 336
>CHS4_NEUCR (Q01285) Chitin synthase 4 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 4) (Class-IV chitin synthase 4) Length = 1195 Score = 28.9 bits (63), Expect = 3.4 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = +1 Query: 13 DRSSRVPSPPTNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFG 150 +R +R P PT MA+ A L P I G+ + R S + A+G Sbjct: 567 ERGNRKPGLPTTMASQNAAGQLLHPGTIYGQGNESRSSFLKSDAYG 612
>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 550 Score = 28.5 bits (62), Expect = 4.5 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 7/59 (11%) Frame = -2 Query: 261 GRGCEGEAGHLGGVGALACDLPDVGLQG-ARDPGGSVDAER------PGDVRRRPHGGG 106 GR G G G G + + G G AR PGG A R PG RRP GGG Sbjct: 488 GRPSGGRPGPGGNRGPASANRGPGGPGGGARGPGGPGGAPRGPGGRPPGGGNRRPPGGG 546
>OCD1_RHIME (P58338) Ornithine cyclodeaminase 1 (EC 4.3.1.12) (OCD 1)| Length = 329 Score = 28.5 bits (62), Expect = 4.5 Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 3/64 (4%) Frame = +1 Query: 118 RPSSHVARAFGVDAAARI---TCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAE 288 R S VA FG AR+ +L IRE DAAK A+A L AE Sbjct: 129 REDSSVAAVFGAGMQARLQLEALALVRPIREARIWARDAAKAEAAAIALGGKLGFAVKAE 188 Query: 289 GAPK 300 P+ Sbjct: 189 TDPR 192
>VGLD_BHV1S (Q08100) Glycoprotein D precursor (Glycoprotein IV)| Length = 417 Score = 28.5 bits (62), Expect = 4.5 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 8/54 (14%) Frame = -2 Query: 276 ARDEEGRGCEGEAGHLG--------GVGALACDLPDVGLQGARDPGGSVDAERP 139 AR++EG +G AG G G G + G +G PG S DA+RP Sbjct: 283 AREDEGETEDGAAGREGNGGPPGPEGDGESPTPEANGGAEGEPKPGPSPDADRP 336
>ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC 2.3.1.94) (ORF| 2) (6-deoxyerythronolide B synthase II) (DEBS 2) Length = 3566 Score = 28.5 bits (62), Expect = 4.5 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +1 Query: 55 ASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREV 204 A L A + PA + G + ++HVA A ++AAA++ +RE+ Sbjct: 2087 AELWRAHGVTPAAVVGHSQGEIAAAHVAGALSLEAAAKVVALRSQVLREL 2136
>ZCHC3_HUMAN (Q9NUD5) Zinc finger CCHC domain-containing protein 3| Length = 404 Score = 28.5 bits (62), Expect = 4.5 Identities = 36/120 (30%), Positives = 39/120 (32%), Gaps = 36/120 (30%) Frame = -2 Query: 294 RPLRTCARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGG--------SVDAE-- 145 R R R+EE G G AG G G A DL D G DP G +VD Sbjct: 55 REPRPPRREEESGGGGGSAGLGGPAGLAAPDLGDFPPAGRGDPKGRRRDPAGEAVDPRKK 114 Query: 144 -----------------------RPG---DVRRRPHGGGPAADLGRHQRGRGLERRCHVG 43 RPG D RP PAA +GR L R C G Sbjct: 115 KGAAEAGRRKKAEAAAAAMATPARPGEAEDAAERPLQDEPAAAAAGPGKGRFLVRICFQG 174
>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)| Length = 637 Score = 28.5 bits (62), Expect = 4.5 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = -2 Query: 273 RDEEGRGCEGEAGHLGGVGALACDLP--DVGLQGARDPGGSVDAERPGDVRRRPHGGG 106 R E R EG+A GA +P V +G+ D GGSVDA D GG Sbjct: 129 RGEAAREAEGQAAAPAAPGAQEEAVPGDSVDAEGSIDAGGSVDAAGSVDAGGSIDAGG 186
>34KD_MYCTU (P65637) 34 kDa antigenic protein homolog| Length = 303 Score = 28.5 bits (62), Expect = 4.5 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 Query: 21 FPRTKPTDQHGSVSPSRGHADAG 89 +P+ +P +G V+PS HAD G Sbjct: 10 YPQAQPAGSYGGVTPSFAHADEG 32
>34KD_MYCBO (P65638) 34 kDa antigenic protein homolog| Length = 303 Score = 28.5 bits (62), Expect = 4.5 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 Query: 21 FPRTKPTDQHGSVSPSRGHADAG 89 +P+ +P +G V+PS HAD G Sbjct: 10 YPQAQPAGSYGGVTPSFAHADEG 32
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 28.1 bits (61), Expect = 5.9 Identities = 14/32 (43%), Positives = 14/32 (43%) Frame = +2 Query: 134 SPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 229 SPGRS PP S P P S P PP Sbjct: 350 SPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 381
>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 493 Score = 28.1 bits (61), Expect = 5.9 Identities = 14/32 (43%), Positives = 14/32 (43%) Frame = +2 Query: 134 SPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 229 SPGRS PP S P P S P PP Sbjct: 340 SPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 371
>DBPA_HUMAN (P16989) DNA-binding protein A (Cold shock domain-containing| protein A) (Single-strand DNA-binding protein NF-GMB) Length = 372 Score = 28.1 bits (61), Expect = 5.9 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = +1 Query: 19 SSRVPSPPTNMAASL-QAAATLMPAKIGG-RASSVRPSSHVARAFGVDAAARITCSLQSD 192 ++ +P PT AA+ Q A P G +A++ P++HVA G DAA T + + Sbjct: 12 TTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAA 71 Query: 193 IREVASKCADAAKMAGFALATSAL 264 A+ DA K LAT L Sbjct: 72 SLATAAGSEDAEKK---VLATKVL 92
>KCNC3_RAT (Q01956) Potassium voltage-gated channel subfamily C member 3| (Voltage-gated potassium channel subunit Kv3.3) (KSHIIID) Length = 889 Score = 28.1 bits (61), Expect = 5.9 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -2 Query: 177 ARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGRG 67 A P G+ + PG R P G PA +GRH G G Sbjct: 51 AASPAGAPLSCGPGGRRAEPCSGLPAVAMGRHGGGGG 87
>NIR_BETVE (P38500) Ferredoxin--nitrite reductase, chloroplast precursor (EC| 1.7.7.1) Length = 583 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = -2 Query: 276 ARDEEGRGCEGEAGHLGG 223 ARDE G+ CEG A LGG Sbjct: 521 ARDENGKPCEGAAVFLGG 538
>OPN4_HUMAN (Q9UHM6) Melanopsin (Opsin-4)| Length = 478 Score = 28.1 bits (61), Expect = 5.9 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +2 Query: 161 PPGSRAPCNPTSGRSQASAPTPPRW 235 P G R P +PT S + P PP W Sbjct: 4 PSGPRVPPSPTQEPSCMATPAPPSW 28
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 28.1 bits (61), Expect = 5.9 Identities = 28/66 (42%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -2 Query: 255 GCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRR--PHGGGPAADLGRH 82 G GE G G G LP G QGA G V A PGD +R P GP LGR Sbjct: 1059 GAVGERGDRGDPGPAG--LP--GSQGAPGTPGPVGA--PGDAGQRGDPGSRGPIGHLGRA 1112 Query: 81 QRGRGL 64 + RGL Sbjct: 1113 GK-RGL 1117
>BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (BCL-2-binding| athanogene-3) (BAG-3) (Bcl-2-binding protein Bis) Length = 577 Score = 28.1 bits (61), Expect = 5.9 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +1 Query: 22 SRVPSPPTNMAASLQAAATLMPAK 93 S VPSPP N+AA +AA + PA+ Sbjct: 386 SAVPSPPKNVAAEQKAAPSPAPAE 409
>AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)| Length = 926 Score = 28.1 bits (61), Expect = 5.9 Identities = 26/83 (31%), Positives = 36/83 (43%) Frame = +1 Query: 49 MAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCADAA 228 +AA AAAT PA A++ P++ V+ A V AA I+ AA Sbjct: 706 VAAPAAAAATPSPANAAALAAAAAPATSVSAATSVSAANSIS---------------PAA 750 Query: 229 KMAGFALATSALLVSGASAEGAP 297 +A A+ A VS A+A P Sbjct: 751 PVAPAAVVPPAAPVSPAAAVQIP 773
>IP3KC_HUMAN (Q96DU7) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol| 1,4,5-trisphosphate 3-kinase C) (InsP 3-kinase C) (IP3K-C) Length = 683 Score = 27.7 bits (60), Expect = 7.7 Identities = 18/51 (35%), Positives = 21/51 (41%) Frame = -2 Query: 249 EGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAA 97 E EAG L + + P G + R PG G RP GGGP A Sbjct: 12 EAEAGALPAAARMGLEAPRGGRR--RQPGQQRPGPGAGAPAGRPEGGGPWA 60
>TNPA_STRFR (P20189) Transposase for transposon Tn4556| Length = 892 Score = 27.7 bits (60), Expect = 7.7 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Frame = -3 Query: 140 RATCDDGRTEEA----RPPILAGISVAAAWRDAAMLVGGLG 30 RA DDGR E + G + AAAW D A GGLG Sbjct: 4 RAGLDDGRGAEGVVRRGSRVAEGAAGAAAWGDDADEAGGLG 44
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 27.7 bits (60), Expect = 7.7 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = -2 Query: 261 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLG 88 G+G +GE G G +G+ G GAR G++ A P GPA G Sbjct: 651 GKGEKGETGLRGDIGS-------PGRDGARGAPGAIGAPGPAGANGDRGEAGPAGPAG 701 Score = 27.3 bits (59), Expect = 10.0 Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 8/65 (12%) Frame = -2 Query: 255 GCEGEAGHLGGVGALACDLPD--------VGLQGARDPGGSVDAERPGDVRRRPHGGGPA 100 G GE GH G GA PD GLQG + G P + P G A Sbjct: 503 GKAGEKGHAGLAGARGAPGPDGNNGAQGPPGLQGVQGGKGEQGPAGPPGFQGLPGPAGTA 562 Query: 99 ADLGR 85 + G+ Sbjct: 563 GEAGK 567
>LIFO_PSEAE (Q01725) Lipase chaperone (Lipase foldase) (Lipase helper protein)| (Lipase modulator) Length = 340 Score = 27.7 bits (60), Expect = 7.7 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = +1 Query: 34 SPPTNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREV 204 +PP A A +MPAK+ +S R +S V +F VDA+ + + DIR + Sbjct: 43 APPAASAGEAVPAPQVMPAKVAPLPTSFRGTS-VDGSFSVDASGNLL--ITRDIRNL 96
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 27.7 bits (60), Expect = 7.7 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = +2 Query: 134 SPGRSASTLPPGSRAPCNPTSGRSQASAPTP 226 +PGR + PGS P P +A AP P Sbjct: 167 TPGRPGTDAAPGSPGPRGPPGPAGEAGAPGP 197
>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor| Length = 920 Score = 27.7 bits (60), Expect = 7.7 Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -2 Query: 273 RDEEGR-GCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAA 97 + E+G G EG+AG G DL D+GL GA+ GSV PGD P GP Sbjct: 673 KGEQGAPGSEGDAGEKG-------DLGDMGLPGAK---GSVG--NPGD----PGSRGPEG 716 Query: 96 DLG 88 G Sbjct: 717 SRG 719
>MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL)| Length = 1147 Score = 27.7 bits (60), Expect = 7.7 Identities = 26/76 (34%), Positives = 26/76 (34%), Gaps = 11/76 (14%) Frame = -2 Query: 261 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPG-----------GSVDAERPGDVRRRPH 115 GRG G G GG G P G G PG G PG R P Sbjct: 1006 GRGGPGMGGP-GGPGRGGPGGPGAGRGGPGGPGAGRGGPGMGGPGGAGRGGPGAGRGGPG 1064 Query: 114 GGGPAADLGRHQRGRG 67 GGP A G GRG Sbjct: 1065 MGGPGAGRGGPGAGRG 1080
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +2 Query: 137 PGRSASTLPPGSRAPCNPTSGRSQASAP 220 PG TLPPG P P + R A AP Sbjct: 597 PGPIRPTLPPGILGPLAPNTPRPPAQAP 624
>EFG1_CANAL (P43064) Enhanced filamentous growth protein| Length = 552 Score = 27.7 bits (60), Expect = 7.7 Identities = 15/52 (28%), Positives = 23/52 (44%) Frame = +1 Query: 19 SSRVPSPPTNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARIT 174 +S P PP +AA+ AAT + G +S+ +S + G A T Sbjct: 329 ASAPPPPPPPVAAATTTAATAISKSSSGNGNSISATSGGSNVSGASGAGSTT 380
>CTG1B_HUMAN (P78358) Cancer/testis antigen 1B (L antigen family member 2)| (LAGE-2 protein) (Autoimmunogenic cancer/testis antigen NY-ESO-1) Length = 180 Score = 27.7 bits (60), Expect = 7.7 Identities = 29/85 (34%), Positives = 33/85 (38%), Gaps = 15/85 (17%) Frame = -2 Query: 264 EGRGCEGEAGHLGGVGALACDLPD-----------VGLQGARDP--GGSVDAERPGD-VR 127 EGRG G G G G +PD G G R P G+ A PG Sbjct: 4 EGRGTGGSTGDADGPGGPG--IPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGGGAP 61 Query: 126 RRPHGGGPAADLGRHQRG-RGLERR 55 R PHGG + G + G RG E R Sbjct: 62 RGPHGGAASGLNGCCRCGARGPESR 86
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 27.7 bits (60), Expect = 7.7 Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 8/65 (12%) Frame = -2 Query: 255 GCEGEAGHLGGVGALACDLPD--------VGLQGARDPGGSVDAERPGDVRRRPHGGGPA 100 G G+ GH G GA PD G QG + G P + P GPA Sbjct: 505 GKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGPA 564 Query: 99 ADLGR 85 ++G+ Sbjct: 565 GEVGK 569
>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 27.7 bits (60), Expect = 7.7 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 17/74 (22%) Frame = -2 Query: 258 RGCEGEAGHLGGVGA-----------LACDLPDVGLQGAR----DPGGSVDAERPGDVRR 124 +G EG+ G LG VGA + + D G +GAR +PG PGD + Sbjct: 447 KGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGLPGAPGDQGQ 506 Query: 123 R--PHGGGPAADLG 88 R P GP D G Sbjct: 507 RGPPGEAGPKGDRG 520
>CL43_BOVIN (P42916) Collectin-43 precursor (CL-43) (43 kDa collectin)| Length = 321 Score = 27.7 bits (60), Expect = 7.7 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 5/61 (8%) Frame = -2 Query: 255 GCEGEAGHLGGVGA--LACDLPDVGLQGAR---DPGGSVDAERPGDVRRRPHGGGPAADL 91 G +GE G GGVGA + GL+G R PGG++ + P P G D Sbjct: 94 GPKGEPGPEGGVGAPGMPGSPGPAGLKGERGTPGPGGAIGPQGPSGAMGPPGLKGDRGDP 153 Query: 90 G 88 G Sbjct: 154 G 154
>TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) (TIS11A protein) (TIS11) (Growth factor-inducible nuclear protein NUP475) (G0/G1 switch regulatory protein 24) Length = 326 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +2 Query: 140 GRSASTLPPGSRAPCNPTSGRSQASAPTPP 229 GR S PPG P +S S +S+P PP Sbjct: 193 GRRTSPPPPGLAGPSLSSSSFSPSSSPPPP 222
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 27.7 bits (60), Expect = 7.7 Identities = 19/56 (33%), Positives = 22/56 (39%) Frame = -2 Query: 255 GCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLG 88 G +GE G G G D + G GAR P G+ A P GPA G Sbjct: 643 GTKGEKGDAGNSG----DYGNPGRDGARGPAGAAGAPGPAGGPGDRGESGPAGPSG 694
>MUC1_MESAU (Q60528) Mucin-1 precursor| Length = 676 Score = 27.3 bits (59), Expect = 10.0 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = +2 Query: 131 TSPGRSASTLPPGSRAPCNPTS-GRSQASAP 220 T+PG S S+ PP S A + T+ G S +SAP Sbjct: 58 TTPGHSGSSAPPTSSAVNSATTPGHSGSSAP 88
>BBSG_THAAR (Q9KJE8) (R)-benzylsuccinyl-CoA dehydrogenase (EC 1.3.99.21)| Length = 406 Score = 27.3 bits (59), Expect = 10.0 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +1 Query: 52 AASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARI 171 AASL+ AAT M ++ RA + ++R G++ AR+ Sbjct: 332 AASLKIAATEMLTRVADRAIQLHGGLGLSREMGIEYVARM 371
>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54 precursor| Length = 1901 Score = 27.3 bits (59), Expect = 10.0 Identities = 18/52 (34%), Positives = 21/52 (40%) Frame = -2 Query: 261 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGG 106 G+G G AG GG G + D P G+ G GG A G GG Sbjct: 556 GQGGTGGAGGAGGAGGVGADNP-TGIGGTGGTGGKGGAGGAGGQGGSSGAGG 606
>TXLNA_HUMAN (P40222) Alpha-taxilin| Length = 546 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +2 Query: 137 PGRSASTLPPGSRAPCNPTSGRSQASAPTPPR 232 PG A + P + APC P + ++AS T P+ Sbjct: 508 PGAQAPSSPRVTEAPCYPGAPSTEASGQTGPQ 539
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 27.3 bits (59), Expect = 10.0 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 Query: 134 SPGRSASTLPPGSRAPCNPTSGRSQASAPTPPR 232 +PG +AST P S P + ++A+AP+P R Sbjct: 831 APGPAASTRPASSSTPRLRPTPAARAAAPSPDR 863
>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)| (EBNA-1) Length = 641 Score = 27.3 bits (59), Expect = 10.0 Identities = 27/74 (36%), Positives = 28/74 (37%) Frame = -2 Query: 261 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGRH 82 G G G AG GG GA G R GGS R G R G G GR Sbjct: 304 GAGGAGGAGAGGGAGAGGAGAGG----GGRGRGGSGGRGRGGSGGRGRGGSGGRRGRGR- 358 Query: 81 QRGRGLERRCHVGR 40 +R RG R GR Sbjct: 359 ERARGGSRERARGR 372
>CO9A2_MOUSE (Q07643) Collagen alpha-2(IX) chain precursor| Length = 688 Score = 27.3 bits (59), Expect = 10.0 Identities = 19/37 (51%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = -2 Query: 267 EEG-RGCEGEAGHLGGVGALACDLPDVGLQGARDPGG 160 EEG RG GEAG G DVG QGAR P G Sbjct: 265 EEGPRGPPGEAGEKG----------DVGSQGARGPQG 291
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 27.3 bits (59), Expect = 10.0 Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 3/77 (3%) Frame = -2 Query: 309 GQPL--GRPLRTCARDEEGR-GCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERP 139 GQP G P R E G G G GH G G + + G +G P G A P Sbjct: 1019 GQPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKN-GDRGETGPAGPSGAPGP 1077 Query: 138 GDVRRRPHGGGPAADLG 88 R P GP D G Sbjct: 1078 AGARGAPGPQGPRGDKG 1094
>CH603_BRAJA (P35862) 60 kDa chaperonin 3 (Protein Cpn60 3) (groEL protein 3)| Length = 545 Score = 27.3 bits (59), Expect = 10.0 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +1 Query: 193 IREVASKCADAAKMAGFALATSALLVSGASAEGA 294 +REVASK ADA AG T+ +L + EGA Sbjct: 73 VREVASKAADA---AGDGTTTATVLAAAIVREGA 103
>CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)| Length = 623 Score = 27.3 bits (59), Expect = 10.0 Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 4/73 (5%) Frame = -2 Query: 273 RDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDP----GGSVDAERPGDVRRRPHGGG 106 R G+GC+GE G G G G+ GA P G + +A RPG P G Sbjct: 333 RGPPGQGCKGEPGLDGKRGR-------DGVPGAPGPPGHKGDTGEAGRPG----APGPPG 381 Query: 105 PAADLGRHQRGRG 67 P D G G G Sbjct: 382 PTGDPGPKGLGPG 394
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing| mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 27.3 bits (59), Expect = 10.0 Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 8/31 (25%) Frame = +2 Query: 161 PPG--------SRAPCNPTSGRSQASAPTPP 229 PPG SRAP PT APTPP Sbjct: 779 PPGPPTPPRRTSRAPIEPTPASEATGAPTPP 809
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 27.3 bits (59), Expect = 10.0 Identities = 18/37 (48%), Positives = 18/37 (48%) Frame = -2 Query: 180 GARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGR 70 G R PGG A RPG RP GGG A G GR Sbjct: 321 GGRGPGG---AGRPGGGGGRPGGGGFAGRPGGGGGGR 354
>RIP6_ORYSA (Q7XD66) Putative ripening-related protein 6 precursor| Length = 167 Score = 27.3 bits (59), Expect = 10.0 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 4/73 (5%) Frame = -2 Query: 228 GGVGALACDLPDVGLQGARDPGGSVDAERP----GDVRRRPHGGGPAADLGRHQRGRGLE 61 GG G + LP G++ P S D GGGPAA GR+ R L Sbjct: 34 GGGGGVDSHLPP-GMRRCSSPAVSEDGTPAVMTVNGFEEGEDGGGPAACDGRYHSDRSLV 92 Query: 60 RRCHVGRWAWYAG 22 G W+AG Sbjct: 93 AALSTG---WFAG 102 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,389,041 Number of Sequences: 219361 Number of extensions: 786775 Number of successful extensions: 4207 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 3639 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4179 length of database: 80,573,946 effective HSP length: 78 effective length of database: 63,463,788 effective search space used: 1523130912 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
