ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet14c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HEM3_LEIXX (Q6AHF1) Porphobilinogen deaminase (EC 2.5.1.61) (PBG... 29 3.1
2IL17D_HUMAN (Q8TAD2) Interleukin-17D precursor (IL-17D) (Interle... 28 4.0
3TIM21_SCHPO (O94618) Import inner membrane translocase subunit T... 28 4.0
4BGLS_KLUMA (P07337) Beta-glucosidase precursor (EC 3.2.1.21) (Ge... 28 5.3
5ANF_CAVPO (P27596) Atrial natriuretic factor precursor (ANF) (At... 28 6.9
6KP58_DROME (Q9VPC0) Serine/threonine-protein kinase PITSLRE (EC ... 27 9.0
7FRLB_SHIFL (P0AC01) Fructoselysine 6-phosphate deglycase (EC 3.5... 27 9.0
8FRLB_ECOLI (P0AC00) Fructoselysine 6-phosphate deglycase (EC 3.5... 27 9.0
9FRLB_ECO57 (Q8X844) Fructoselysine 6-phosphate deglycase (EC 3.5... 27 9.0
10SAHH_METKA (P58855) Adenosylhomocysteinase (EC 3.3.1.1) (S-adeno... 27 9.0
11ARMX2_MOUSE (Q6A058) Armadillo repeat-containing X-linked protein 2 27 9.0

>HEM3_LEIXX (Q6AHF1) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 329

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 243 HGEYESKAVGGLDRTGAFSVPLAADLHGADCVAQLHSA--VSNAPCPG 380
           HG+   +++  L  TG F+  L   L   +C   +HS   +  AP PG
Sbjct: 52  HGDTSRESLSELGGTGVFATALRDALRNGECDLVVHSLKDLPTAPAPG 99



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>IL17D_HUMAN (Q8TAD2) Interleukin-17D precursor (IL-17D) (Interleukin-27)|
           (IL-27)
          Length = 202

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = -1

Query: 316 SAARGTLKAPVRSRPPTALLSYSPWTY 236
           S   G   A  R RPPT L S SPW Y
Sbjct: 70  SCPAGGRPADRRFRPPTNLRSVSPWAY 96



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>TIM21_SCHPO (O94618) Import inner membrane translocase subunit TIM21,|
           mitochondrial precursor
          Length = 223

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
 Frame = +3

Query: 195 EEAFKALQVAIKCRYVHGEYESKAVG----GLDRTGAFSVPLAADLHGAD-CVAQLH 350
           +EAF+ L+   +CRYV G++  KA+G     L RT         D HG +  V Q H
Sbjct: 103 DEAFELLKANEECRYVFGDH-MKALGEATHPLRRTHGILTSRVWDHHGVEHLVLQFH 158



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>BGLS_KLUMA (P07337) Beta-glucosidase precursor (EC 3.2.1.21) (Gentiobiase)|
           (Cellobiase) (Beta-D-glucoside glucohydrolase)
          Length = 845

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = +3

Query: 237 YVHGEYESKAVGGLDRTGAFSVPLAADLHGADCVAQLHSAVSNAPCPGQEP 389
           Y  G Y  K++GGL  +        AD   A  +A+ +S         +EP
Sbjct: 381 YTVGAYSHKSIGGLAESSLIDAAKPADAENAGLIAKFYSNPVEERSEDEEP 431



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>ANF_CAVPO (P27596) Atrial natriuretic factor precursor (ANF) (Atrial|
           natriuretic peptide) (ANP) (Prepronatriodilatin)
           [Contains: Cardiodilatin-related peptide (CDP)]
           (Fragment)
          Length = 128

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 8/41 (19%)
 Frame = -1

Query: 385 SWPGH--------GALETALWS*ATQSAPWRSAARGTLKAP 287
           SWPG         GAL    W  + +SAP +S  R  L AP
Sbjct: 57  SWPGEAGPAQREGGALGRGPWDSSDRSAPLKSKLRALLDAP 97



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>KP58_DROME (Q9VPC0) Serine/threonine-protein kinase PITSLRE (EC 2.7.11.22)|
           (Cell division cycle 2-like)
          Length = 952

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 18  PSISSSHFTSHQHFGSGMAAPR 83
           PS ++ H+  HQH     AAPR
Sbjct: 134 PSYAAHHYHHHQHLSGARAAPR 155



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>FRLB_SHIFL (P0AC01) Fructoselysine 6-phosphate deglycase (EC 3.5.-.-)|
          Length = 340

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = +3

Query: 189 KAEEAFKALQVAIKCRYVHGEYESKAVGGLDRTGAFSVPLAADLHGADCVAQLH 350
           K EE  KAL++   C  +   +  +A   +     FS+      + ADC+ ++H
Sbjct: 104 KTEEVIKALELGRACGALTAAFTKRADSPITSAAEFSID-----YQADCIWEIH 152



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>FRLB_ECOLI (P0AC00) Fructoselysine 6-phosphate deglycase (EC 3.5.-.-)|
          Length = 340

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = +3

Query: 189 KAEEAFKALQVAIKCRYVHGEYESKAVGGLDRTGAFSVPLAADLHGADCVAQLH 350
           K EE  KAL++   C  +   +  +A   +     FS+      + ADC+ ++H
Sbjct: 104 KTEEVIKALELGRACGALTAAFTKRADSPITSAAEFSID-----YQADCIWEIH 152



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>FRLB_ECO57 (Q8X844) Fructoselysine 6-phosphate deglycase (EC 3.5.-.-)|
          Length = 340

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = +3

Query: 189 KAEEAFKALQVAIKCRYVHGEYESKAVGGLDRTGAFSVPLAADLHGADCVAQLH 350
           K EE  KAL++   C  +   +  +A   +     FS+      + ADC+ ++H
Sbjct: 104 KTEEVIKALELGRACGALTAAFTKRADSPITSAAEFSID-----YQADCIWEIH 152



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>SAHH_METKA (P58855) Adenosylhomocysteinase (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
          Length = 424

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +3

Query: 171 CTGKNIKAEEAFKALQVAIKCRYVHGEYESKAVGGLDRTGAFSVPLAADLHGADCVAQLH 350
           C   + K E A   ++  +      GE E +    +DR  +    +  D  GADC+A++H
Sbjct: 81  CNPLSTKDEVAAALVEEGVHVYAWRGETEEEYYQNIDRVLSHEPDIIVD-DGADCIARVH 139

Query: 351 S 353
           +
Sbjct: 140 T 140



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>ARMX2_MOUSE (Q6A058) Armadillo repeat-containing X-linked protein 2|
          Length = 784

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 22/77 (28%), Positives = 33/77 (42%)
 Frame = -1

Query: 379 PGHGALETALWS*ATQSAPWRSAARGTLKAPVRSRPPTALLSYSPWTYLHLIATCRALKA 200
           PG       + S    + PW  A  G +++P  + PP A+ S  P       A   A+ A
Sbjct: 191 PGPVVPSPTIVSTGPAAIPWAVAHPGAVQSPGPAVPPMAVQSLVP------AAPSWAVVA 244

Query: 199 SSALMFFPVQSAHLARP 149
               ++ PV +AH A P
Sbjct: 245 PPGAVYIPV-AAHFAGP 260


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.124    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,797,814
Number of Sequences: 219361
Number of extensions: 499385
Number of successful extensions: 1786
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1786
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
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