ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet14b08 |
|---|---|
| Clone Library Name | barley_pub |
>MCA1_MOUSE (P31230) Multisynthetase complex auxiliary component p43 [Contains:| Endothelial monocyte-activating polypeptide 2 (EMAP-II) (Small inducible cytokine subfamily E member 1)] Length = 310 Score = 33.5 bits (75), Expect = 0.24 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 8/67 (11%) Frame = +2 Query: 221 VVLDTPLVA--TASMEKKRKPKEDTTAS------LNSAHSKETKESTRKRGGKKQDKETA 376 V L TPL TAS + P TTAS + + K+ KE T K+G KK+ +++A Sbjct: 80 VRLSTPLQTNCTASESVVQSPSVATTASPATKEQIKAGEEKKVKEKTEKKGEKKEKQQSA 139 Query: 377 XXXXXPK 397 K Sbjct: 140 AASTDSK 146
>FIS2_ARATH (Q9ZNT9) Polycomb group protein FERTILIZATION-INDEPENDENT SEED 2| Length = 632 Score = 32.3 bits (72), Expect = 0.54 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = +2 Query: 179 PEDAAAAASREGSSVVLDT-PLVATASMEKKRKPKEDTTASLNSAHSKETKESTRK 343 P +S++ S ++ T P +A +S K R +D +S AHS + +STRK Sbjct: 367 PSPPKTRSSKKTSDILTTTQPTIAESSEPKVRHVNDDNVSSTPRAHSSKKNKSTRK 422 Score = 30.0 bits (66), Expect = 2.7 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%) Frame = +2 Query: 83 SRR*AMAGFSHLPQQMEYGLTNAGSFLLCHGNPEDAAA---AASREGSSVVLDT--PLVA 247 SRR + + ++ + + + + H N E+ ++ A S E +S +L T P +A Sbjct: 270 SRRKQLYAKRYKARETQPAIAESSEPKVLHVNDENVSSPPEAHSLEKASDILTTTQPAIA 329 Query: 248 TASMEKKRKPKEDTTASLNSAHSKETKESTRK 343 +S K ++ +S AHS + +STRK Sbjct: 330 ESSEPKVPHVNDENVSSTPRAHSSKKNKSTRK 361
>P53_CAVPO (Q9WUR6) Cellular tumor antigen p53 (Tumor suppressor p53)| Length = 391 Score = 32.0 bits (71), Expect = 0.70 Identities = 18/57 (31%), Positives = 23/57 (40%) Frame = -3 Query: 266 SSPWKLWPQEGCQEPQMSPPLRLLLLHPQGCHGRARSCRHW*GHTPSAAGGVRILPL 96 S WKL P+ +SPP+ LLL P+ W G P G V P+ Sbjct: 20 SDLWKLLPENNVLSDSLSPPMDHLLLSPE-------EVASWLGENPDGDGHVSAAPV 69
>CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B)| Length = 895 Score = 30.8 bits (68), Expect = 1.6 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = +2 Query: 176 NPEDAAAAASREGSSVVLDTPLVATASMEKKRKPKEDTTASLNSAHSKETKEST 337 +P +AAAA++E S + KKRK +++S NS++ +E +ST Sbjct: 8 SPSPSAAAAAQEVRSATDGNTSTTPPTSAKKRKLNSSSSSSSNSSNEREDFDST 61
>IF2_HELHP (Q7VHF6) Translation initiation factor IF-2| Length = 882 Score = 30.4 bits (67), Expect = 2.0 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = +2 Query: 182 EDAAAAASREGSSVVLDTPLVATASMEKKRKPKEDTT-ASLNSAHSKETKESTRKRGGKK 358 E+AAA + V P T ++ +KPK+ TT S ++A KE K++T + K Sbjct: 41 EEAAALFEYINTGVNSYIPANKTKDKKETKKPKKATTKTSQSAAKEKEIKKTTTTKAPKT 100 Query: 359 QDKETA 376 K T+ Sbjct: 101 AKKTTS 106
>K0553_HUMAN (Q9UKJ3) Protein KIAA0553| Length = 1089 Score = 30.4 bits (67), Expect = 2.0 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +2 Query: 254 SMEKKRKPKEDTTASLNSAHSKETKESTRKRGGKKQDKETA 376 S + KRKPK DT + A S E K RK+ +K++K +A Sbjct: 271 SSKHKRKPKADTEEKSSKAESGE-KSKKRKKRKRKKNKSSA 310
>VP3_ARMV (P24820) P3 protein| Length = 360 Score = 30.4 bits (67), Expect = 2.0 Identities = 24/85 (28%), Positives = 33/85 (38%) Frame = +2 Query: 176 NPEDAAAAASREGSSVVLDTPLVATASMEKKRKPKEDTTASLNSAHSKETKESTRKRGGK 355 NP + R+GS ++ P + K K + D ASL SK KR + Sbjct: 52 NPVSKRTSRDRDGSKIMGQGPPAVGPRVSKGHKQQSDGGASLAPVKSKRAVR-REKRRCR 110 Query: 356 KQDKETAXXXXXPKGYIHVRARRGQ 430 K+ A KG V A +GQ Sbjct: 111 KKGATKAGTTPVQKGGHCVHASKGQ 135
>TULP2_HUMAN (O00295) Tubby-related protein 2 (Tubby-like protein 2)| Length = 520 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = +2 Query: 209 EGSSVVLDTPLVATASMEKKRKPKEDTTASLNSAHSKETKESTRKRGGKKQD 364 +G V + +EKKR+ E T + ++AH++E ++ + GG D Sbjct: 200 DGDCVYENLAFQKEEDLEKKREASESTGTNSSAAHNEELSKALKGEGGTDSD 251
>MMAB_HUMAN (Q96EY8) Cob(I)yrinic acid a,c-diamide adenosyltransferase,| mitochondrial precursor (EC 2.5.1.17) (Cob(I)alamin adenosyltransferase) (Methylmalonic aciduria type B protein) Length = 250 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +3 Query: 6 VGSSL-NPSSLPRKPHLQHKGAVAR*LVDVEQWQDSHTSR 122 VGS+L P S R+ HL++ A ++++EQW D +TS+ Sbjct: 124 VGSALATPCSSAREAHLKYTTFKAGPILELEQWIDKYTSQ 163
>RYR3_HUMAN (Q15413) Ryanodine receptor 3 (Brain-type ryanodine receptor) (RyR3)| (RYR-3) (Brain ryanodine receptor-calcium release channel) Length = 4870 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +2 Query: 230 DTPLVATASMEKKRKPKEDTTASLNSAHSKETKESTRKRGGKKQDKE 370 D P ++++KKRK + + N A K E G+K+DK+ Sbjct: 4310 DEPPTLESTVQKKRKAQAAEMKAANEAEGKVESEKADMEDGEKEDKD 4356
>ATRX_PONPY (Q7YQM3) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) Length = 2492 Score = 30.0 bits (66), Expect = 2.7 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +2 Query: 176 NPEDAAAAASREGSSVVLDTPLVATASMEKKRKPKEDTTASLNSAHSKETKEST 337 N E+ S GS + L+ M KK K +TTA++NS++ K K++T Sbjct: 325 NGEEKKLDDSCSGSVTYSYSALIVPKEMIKKAKKLIETTANMNSSYVKFLKQAT 378
>ATRX_PANTR (Q7YQM4) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) Length = 2492 Score = 30.0 bits (66), Expect = 2.7 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +2 Query: 176 NPEDAAAAASREGSSVVLDTPLVATASMEKKRKPKEDTTASLNSAHSKETKEST 337 N E+ S GS + L+ M KK K +TTA++NS++ K K++T Sbjct: 325 NGEEKKLDDSCSGSVTYSYSALIVPKEMIKKAKKLIETTANMNSSYVKFLKQAT 378
>ATRX_HUMAN (P46100) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) (Znf-HX) Length = 2492 Score = 30.0 bits (66), Expect = 2.7 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +2 Query: 176 NPEDAAAAASREGSSVVLDTPLVATASMEKKRKPKEDTTASLNSAHSKETKEST 337 N E+ S GS + L+ M KK K +TTA++NS++ K K++T Sbjct: 325 NGEEKKLDDSCSGSVTYSYSALIVPKEMIKKAKKLIETTANMNSSYVKFLKQAT 378
>Y506_MYCPN (P75280) Hypothetical lipoprotein MPN506 precursor (P02_orf793)| Length = 793 Score = 30.0 bits (66), Expect = 2.7 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = +2 Query: 203 SREGSSVVLDTPLVATASMEKKRKPKEDTTASLNSAHSKETKESTRKRGGKKQDKET 373 + EG+S + L+ T ++ KPKE+ ++ NS KES++ +G K + +T Sbjct: 455 TNEGNSTNGEQNLLGTFEVKDDSKPKEEVKSNKNSG-----KESSQNQGKKSNNNKT 506
>IGA4_HAEIN (P45386) Immunoglobulin A1 protease precursor (EC 3.4.21.72) (IGA1| protease) Length = 1849 Score = 30.0 bits (66), Expect = 2.7 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +2 Query: 176 NPEDAAAAASREGSSVVLDTPLVATASMEKKRKPKEDTTASLNSAHSKETKES-TRKRGG 352 N + +A + ++ D P + T + E R+P+ +T A + A++ E+ ES +R+R Sbjct: 1425 NSINTGSATTMTETAEKSDKPQMETVT-ENDRQPEANTVADNSVANNSESSESKSRRRRS 1483 Query: 353 KKQDKETA 376 Q KET+ Sbjct: 1484 VSQPKETS 1491
>SFR11_HUMAN (Q05519) Splicing factor arginine/serine-rich 11 (Arginine-rich 54| kDa nuclear protein) (p54) Length = 484 Score = 30.0 bits (66), Expect = 2.7 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 4/66 (6%) Frame = +2 Query: 254 SMEKKRKPKEDTTASLNSAHSKE----TKESTRKRGGKKQDKETAXXXXXPKGYIHVRAR 421 S K R + + +HS+E ++ +++ R KK+DKE PK Y R Sbjct: 277 SHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRS 336 Query: 422 RGQATD 439 R + + Sbjct: 337 RSASRE 342
>CYL1_BOVIN (P35662) Cylicin-1 (Cylicin I) (Multiple-band polypeptide I)| Length = 667 Score = 29.6 bits (65), Expect = 3.5 Identities = 17/61 (27%), Positives = 28/61 (45%) Frame = +2 Query: 260 EKKRKPKEDTTASLNSAHSKETKESTRKRGGKKQDKETAXXXXXPKGYIHVRARRGQATD 439 +KK+ K+D + S SK+ K+ ++K GKK K+ K A G + D Sbjct: 348 DKKKDAKKDAASDAESGDSKDAKKDSKK--GKKDSKKDNKKKDAKKDAESTDAESGDSKD 405 Query: 440 S 442 + Sbjct: 406 A 406
>ITA3_DROME (O44386) Integrin alpha-PS3 precursor (Position-specific antigen 3| alpha chain) (Protein scab) (Protein volado) Length = 1115 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = +2 Query: 224 VLDTPLVATASMEKKRKPKEDTTAS 298 VLDT +VATASM +KR+ + TA+ Sbjct: 913 VLDTSMVATASMSRKRRDLKALTAN 937
>FLT3L_HUMAN (P49771) SL cytokine precursor (Fms-related tyrosine kinase 3| ligand) (Flt3 ligand) (Flt3L) Length = 235 Score = 29.6 bits (65), Expect = 3.5 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Frame = -3 Query: 287 CLPWASS-SSPWKLWPQEGCQEPQMSPPLRLLLLHPQGCHGRARS-CRHW 144 C P +S+ PW P E PPL LLLL P G A + C HW Sbjct: 158 CQPDSSTLPPPWSPRPLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHW 207
>PTCD1_HUMAN (O75127) Pentatricopeptide repeat protein 1| Length = 700 Score = 29.6 bits (65), Expect = 3.5 Identities = 18/71 (25%), Positives = 35/71 (49%) Frame = +2 Query: 152 GSFLLCHGNPEDAAAAASREGSSVVLDTPLVATASMEKKRKPKEDTTASLNSAHSKETKE 331 G F+L H +P A A REG + P +++S + +++ T SL S S Sbjct: 17 GLFILQHLDPCRARWAGGREGLMRPMWAPFSSSSSQLPLGQERQENTGSLGSDPSHSNST 76 Query: 332 STRKRGGKKQD 364 +T++ ++++ Sbjct: 77 ATQEEDEEEEE 87
>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Hyperpolarization-activated cation channel 4) (HAC-4) Length = 1175 Score = 29.3 bits (64), Expect = 4.5 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +3 Query: 231 TPLLWPQLPWRRRGSPRKTLLPASTLPTPRKPRRVPGR 344 TP +P P R GS LLP ++ P P P P R Sbjct: 1015 TPRTFPSAPPRASGSHGSLLLPPASSPPPPPPPPAPQR 1052
>HUNB_DROSO (O46258) Protein hunchback (Fragments)| Length = 159 Score = 29.3 bits (64), Expect = 4.5 Identities = 21/74 (28%), Positives = 29/74 (39%) Frame = +3 Query: 96 QWQDSHTSRSRWXXXXXXXXXXXXXXXTLRMQQQQPQGRAHLWFLTPLLWPQLPWRRRGS 275 Q Q H S S L+ QQQQP L+W LP + Sbjct: 30 QHQQRHNSNSNASSPHQSPLPNLQLEQYLKQQQQQP-----------LMWSGLP-----N 73 Query: 276 PRKTLLPASTLPTP 317 P +T++PA+ P+P Sbjct: 74 PMQTIMPANMRPSP 87
>TPIS_AERPE (Q9YBR1) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 223 Score = 28.9 bits (63), Expect = 5.9 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +2 Query: 161 LLCHGNPEDAAAAASREGSSVVLDTP-LVATASMEKKRKPK 280 L C PE+AAAAA S V L+ P L+ T + KP+ Sbjct: 116 LACADTPEEAAAAALLRPSMVALEPPELIGTGIPVSQAKPE 156
>TFE2_HUMAN (P15923) Transcription factor E2-alpha (Immunoglobulin| enhancer-binding factor E12/E47) (Transcription factor 3) (TCF-3) (Immunoglobulin transcription factor 1) (Transcription factor ITF-1) (Kappa-E2-binding factor) Length = 654 Score = 28.9 bits (63), Expect = 5.9 Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 13/115 (11%) Frame = +2 Query: 65 GGSSLASRR*AMAGFSHLPQQMEYGLTNAGSFLLCHGNPEDAAAAASREGSSVVLDTPL- 241 G SL R + G SH E GL AGS L H + AA S+ G+ L P Sbjct: 431 GPMSLGGRHAGLVGGSH----PEDGL--AGSTSLMHNH----AALPSQPGTLPDLSRPPD 480 Query: 242 ---------VATASMEKKRKPKED---TTASLNSAHSKETKESTRKRGGKKQDKE 370 A+ E KR+ KED T+A+ +S K+ ++ R R +D++ Sbjct: 481 SYSGLGRAGATAAASEIKREEKEDEENTSAADHSEEEKKELKAPRARTSPDEDED 535
>NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)| (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1) Length = 704 Score = 28.9 bits (63), Expect = 5.9 Identities = 32/116 (27%), Positives = 47/116 (40%) Frame = +2 Query: 23 PLLLAKKTSSPTQGGGSSLASRR*AMAGFSHLPQQMEYGLTNAGSFLLCHGNPEDAAAAA 202 P L AK+ +P GG SS S + P + AG+ + P AAA Sbjct: 464 PSLPAKQ--APRAGGDSSSDSESSSSEEEKKTPPKPPAKKKAAGA-AVPKPTPVKKAAAE 520 Query: 203 SREGSSVVLDTPLVATASMEKKRKPKEDTTASLNSAHSKETKESTRKRGGKKQDKE 370 S SS D+ S E+K+KPK T + + S + GK+ ++E Sbjct: 521 SSSSSSSSEDS------SEEEKKKPKSKATPKPQAGKANGVPASQNGKAGKESEEE 570
>UVE1_SCHPO (Q10988) UV-damage endonuclease (EC 3.-.-.-) (UVDE)| Length = 599 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +2 Query: 269 RKPKEDTTASLNSAHSKETKESTRKRGGKKQDKET 373 +K E A+++ H K T STRKR + K T Sbjct: 84 KKENETELANISGPHKKSTSTSTRKRARSSKKKAT 118
>MDG1_YEAST (P53885) Signal transduction protein MDG1 (Multicopy suppressor of| defective G-protein 1) Length = 366 Score = 28.9 bits (63), Expect = 5.9 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +2 Query: 173 GNPEDAAAAASREGSSVVLDTPLVATASMEKKRKPKEDTTASLNSAHSKETK-ESTRKRG 349 G +D + +A E S PL +A EK P+E S ++H+KET + T K Sbjct: 249 GGGKDTSTSADAEASEDQNKEPLSKSAKFEK---PEEKVPVSSITSHAKETSVKPTGKVA 305 Query: 350 GKKQDKET 373 + Q ET Sbjct: 306 TETQTYET 313
>ATT_BOMMO (Q26431) Attacin precursor (Nuecin)| Length = 214 Score = 28.9 bits (63), Expect = 5.9 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 2/71 (2%) Frame = +2 Query: 149 AGSFLLCHGNPED--AAAAASREGSSVVLDTPLVATASMEKKRKPKEDTTASLNSAHSKE 322 AG L H N D A A A R S + + P T K+ ASL++AHS Sbjct: 103 AGKVNLFHNNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGVDYMFKQKVGASLSAAHSDV 162 Query: 323 TKESTRKRGGK 355 + GGK Sbjct: 163 INRNDYSAGGK 173
>ZTF1_CAEEL (P34450) Zinc finger transcription factor family protein 1| Length = 582 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = -2 Query: 147 LVRPYSICCGRCENPAIAQRLLASELPPPCVGDEVFLARRRGSEKSQQ 4 L R + C C+NP I Q + ELP + D++ R + K Q+ Sbjct: 285 LFRDHVECENGCQNPEIRQDIYYGELPEGTIVDDLTQDRLQNFRKRQE 332
>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2| (EC 2.7.11.1) Length = 1734 Score = 28.9 bits (63), Expect = 5.9 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Frame = +2 Query: 185 DAAAAASREGSSVVLDTPLVATASMEKKRKPKEDTT--ASLNSAHSKETKESTRKRGGKK 358 +AA ++EG + D P + + R P E+ +S +S + ET +S RG + Sbjct: 383 EAAEGHAKEGHGIKCDIPRYIVSQLGLTRDPLEEMAQLSSYDSPDTPETDDSVEGRGVSQ 442 Query: 359 QDKET 373 ++T Sbjct: 443 PSQKT 447
>MMTA2_HUMAN (Q9BU76) Multiple myeloma tumor-associated protein 2 (hMMTAG2)| Length = 263 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Frame = +2 Query: 248 TASMEKKRKPK-EDTTASLNSAH--SKETKESTRKRGGKKQDKE 370 T++ +RKP+ ED T S +H SK+ K+ +KR KK+ K+ Sbjct: 160 TSAASARRKPRAEDQTESSCESHRKSKKEKKKKKKRKHKKEKKK 203
>MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-protein kinase 2| (EC 2.7.11.1) Length = 1798 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Frame = +2 Query: 185 DAAAAASREGSSVVLDTPLVATASMEKKRKPKEDTT--ASLNSAHSKETKESTRKRGGKK 358 +AA ++EG + D P + + R P E+ +S +S + ET +S G Sbjct: 442 EAAEGHAKEGQGIKCDIPRYIVSQLGLTRDPLEEMAQLSSCDSPDTPETDDSIEGHGASL 501 Query: 359 QDKET 373 K+T Sbjct: 502 PSKKT 506
>TAU_SPECI (Q6TS35) Microtubule-associated protein tau| Length = 429 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = +3 Query: 255 PWRRRGSPRKTLLPASTLPTPRKPRRVPGRGE-AKS 359 P ++G+ T +PA T P+P+ P PG GE AKS Sbjct: 147 PPGQKGTANATRIPAKTTPSPKTP---PGTGEPAKS 179
>ZN326_MOUSE (O88291) Zinc finger protein 326 (Zinc finger protein-associated| with nuclear matrix of 75 kDa) Length = 580 Score = 28.5 bits (62), Expect = 7.7 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 3/96 (3%) Frame = +2 Query: 71 SSLASRR*AMAGFS-HLPQQMEYGLTNAGSFLLCHGNPEDAAAAASREGSS--VVLDTPL 241 SSL R +G+ + P+Q +G + G F + N D+ ++ GSS Sbjct: 81 SSLGGRDLYRSGYGFNEPEQTRFGGSYGGRFESSYRNSLDSFGGRNQGGSSWEAPYSRSK 140 Query: 242 VATASMEKKRKPKEDTTASLNSAHSKETKESTRKRG 349 + ME + + + +S +S H K +R RG Sbjct: 141 LRPGFMEDRGRENYSSYSSFSSPHMKPAPVGSRGRG 176
>TF3C1_HUMAN (Q12789) General transcription factor 3C polypeptide 1| (Transcription factor IIIC-alpha subunit) (TF3C-alpha) (TFIIIC 220 kDa subunit) (TFIIIC220) (TFIIIC box B-binding subunit) Length = 2109 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/56 (28%), Positives = 27/56 (48%) Frame = +2 Query: 242 VATASMEKKRKPKEDTTASLNSAHSKETKESTRKRGGKKQDKETAXXXXXPKGYIH 409 V+ ASM+++ E L+ + S+E + S+++RG Q A PK H Sbjct: 456 VSLASMQEESLLPEGEDTFLSESDSEEERSSSKRRGRGSQKDTRASANLRPKTQPH 511
>HUNB_DROAD (O46232) Protein hunchback (Fragments)| Length = 192 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +3 Query: 231 TPLLWPQLPWRRRGSPRKTLLPASTLPTPRKPRRVP 338 +PL WP LP +P ++++PA+ P+P P Sbjct: 101 SPLTWPGLP-----NPMQSIMPANLRPSPNTTTTTP 131
>HAS1_ASPOR (Q2UUN6) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 596 Score = 28.5 bits (62), Expect = 7.7 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Frame = +2 Query: 182 EDAAAAASREGSSVVLDTPLVATASMEKKRKPKEDTTAS-----LNSAHSKETKESTRKR 346 E+AAA A+ E V+++P ++EKK+ KE + + K T+ES ++ Sbjct: 26 EEAAAPAATEA---VIESPEKEEVTVEKKKAKKEKSKKQKVEHMSSDEEQKNTEESEQEA 82 Query: 347 GGKKQDKETAXXXXXPKG 400 +++K A G Sbjct: 83 SDNEEEKSDAEETPAANG 100
>ZN326_PONPY (Q5RCA4) Zinc finger protein 326| Length = 579 Score = 28.5 bits (62), Expect = 7.7 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 3/96 (3%) Frame = +2 Query: 71 SSLASRR*AMAGFS-HLPQQMEYGLTNAGSFLLCHGNPEDAAAAASREGSS--VVLDTPL 241 SSL R +G+ + P+Q +G + G F + N D+ ++ GSS Sbjct: 81 SSLGGRDLYRSGYGFNEPEQSRFGGSYGGRFESSYRNSLDSFGGRNQGGSSWEAPYSRSK 140 Query: 242 VATASMEKKRKPKEDTTASLNSAHSKETKESTRKRG 349 + ME + + + +S +S H K +R RG Sbjct: 141 LRPGFMEDRGRENYSSYSSFSSPHMKPAPVGSRGRG 176
>ZN326_HUMAN (Q5BKZ1) Zinc finger protein 326| Length = 582 Score = 28.5 bits (62), Expect = 7.7 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 3/96 (3%) Frame = +2 Query: 71 SSLASRR*AMAGFS-HLPQQMEYGLTNAGSFLLCHGNPEDAAAAASREGSS--VVLDTPL 241 SSL R +G+ + P+Q +G + G F + N D+ ++ GSS Sbjct: 81 SSLGGRDLYRSGYGFNEPEQSRFGGSYGGRFESSYRNSLDSFGGRNQGGSSWEAPYSRSK 140 Query: 242 VATASMEKKRKPKEDTTASLNSAHSKETKESTRKRG 349 + ME + + + +S +S H K +R RG Sbjct: 141 LRPGFMEDRGRENYSSYSSFSSPHMKPAPVGSRGRG 176
>FCGR1_HUMAN (P12314) High affinity immunoglobulin gamma Fc receptor I precursor| (Fc-gamma RI) (FcRI) (IgG Fc receptor I) (CD64 antigen) Length = 374 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +2 Query: 212 GSSVVLDTPLVATASMEKKRKPKEDTTASLNSAHSKETKESTRK 343 G +++T L T E KRK K D SL+S H K+ S ++ Sbjct: 300 GIMFLVNTVLWVTIRKELKRKKKWDLEISLDSGHEKKVISSLQE 343 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,540,594 Number of Sequences: 219361 Number of extensions: 1279056 Number of successful extensions: 4695 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4433 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4681 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
