| Clone Name | baet14b03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ139268.1| Triticum aestivum geranylgeranyl hydrogenase mRNA, complete cds Length = 1704 Score = 856 bits (432), Expect = 0.0 Identities = 453/460 (98%) Strand = Plus / Plus Query: 7 cggcgccgaggtcctcaatggtctcttcctaaggtacgaggagcccaaggagcgcaacgg 66 ||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||| Sbjct: 561 cggcgccgaggtcctcaatggcctcttcctaaggtatgaggcgcccaaggagcgcaacgg 620 Query: 67 cacgtacacggtgcactacaaccactacgacagctccaacggcaaggtgggcggcgagaa 126 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 621 cacgtacacggtgcactacaatcactacgacagctccaacggcaaggtgggcggcgagaa 680 Query: 127 gcggtcgttcgaggtggacgcgatcgtgggcgcggacggcgccaactcgcgcgtggccaa 186 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 681 gcggtcgttcgaggtggacgcgatcgtgggcgcggacggcgccaactcccgcgtggccaa 740 Query: 187 ggatatgggcgcgggcgactacgagtacgccatcgcgttccaggagcgcgtcaagatccc 246 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggacatgggcgcgggcgactacgagtacgccatcgcgttccaggagcgcgtcaagatccc 800 Query: 247 cgacgacaagatgcgctactacgaggagcgcgccgagatgtacgtcggcgacgacgtctc 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 cgacgacaagatgcgctactacgaggagcgcgccgagatgtacgtcggcgacgacgtctc 860 Query: 307 ccccgacttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcac 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 861 ccccgacttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcac 920 Query: 367 cgtcacccacaaggccgacatcaagaagttccaggccgccacccgcctccgcgccaagga 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 921 cgtcacccacaaggccgacatcaagaagttccaggccgccacccgcctccgcgccaagga 980 Query: 427 caagatcgagggcggcaagatcatccgcgtcgaggctcac 466 ||||||||||||||||||||||||||||||||||||||| Sbjct: 981 taagatcgagggcggcaagatcatccgcgtcgaggctcac 1020
>ref|XM_467759.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1778 Score = 706 bits (356), Expect = 0.0 Identities = 434/460 (94%) Strand = Plus / Plus Query: 7 cggcgccgaggtcctcaatggtctcttcctaaggtacgaggagcccaaggagcgcaacgg 66 ||||||||||||| |||||||||||||||| ||||| |||| ||||||||| | |||||| Sbjct: 548 cggcgccgaggtcgtcaatggtctcttcctgaggtatgaggcgcccaaggaacccaacgg 607 Query: 67 cacgtacacggtgcactacaaccactacgacagctccaacggcaaggtgggcggcgagaa 126 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 608 gtcgtacgtggtgcactacaaccactacgacagctccaacggcaaggccggcggcgagaa 667 Query: 127 gcggtcgttcgaggtggacgcgatcgtgggcgcggacggcgccaactcgcgcgtggccaa 186 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 668 gcggacgttcgaggtggacgcgatcgtgggcgcggacggcgccaactcccgcgtcgccaa 727 Query: 187 ggatatgggcgcgggcgactacgagtacgccatcgcgttccaggagcgcgtcaagatccc 246 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 ggacatgggcgccggcgactacgagtacgccatcgcgttccaggagcgcgtcaagatccc 787 Query: 247 cgacgacaagatgcgctactacgaggagcgcgccgagatgtacgtcggcgacgacgtctc 306 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 cgacgacaagatgaagtactacgaggagcgcgccgagatgtacgtcggcgacgacgtctc 847 Query: 307 ccccgacttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcac 366 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 848 gccggacttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcac 907 Query: 367 cgtcacccacaaggccgacatcaagaagttccaggccgccacccgcctccgcgccaagga 426 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 908 cgtcacccacaagcccgacatcaagaagttccaggccgccacccgccttcgcgccaagga 967 Query: 427 caagatcgagggcggcaagatcatccgcgtcgaggctcac 466 | ||||||||||||||||||||||||||||||||||||| Sbjct: 968 ccggatcgagggcggcaagatcatccgcgtcgaggctcac 1007
>ref|XM_506969.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1734_E02.38 mRNA Length = 1828 Score = 706 bits (356), Expect = 0.0 Identities = 434/460 (94%) Strand = Plus / Plus Query: 7 cggcgccgaggtcctcaatggtctcttcctaaggtacgaggagcccaaggagcgcaacgg 66 ||||||||||||| |||||||||||||||| ||||| |||| ||||||||| | |||||| Sbjct: 548 cggcgccgaggtcgtcaatggtctcttcctgaggtatgaggcgcccaaggaacccaacgg 607 Query: 67 cacgtacacggtgcactacaaccactacgacagctccaacggcaaggtgggcggcgagaa 126 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 608 gtcgtacgtggtgcactacaaccactacgacagctccaacggcaaggccggcggcgagaa 667 Query: 127 gcggtcgttcgaggtggacgcgatcgtgggcgcggacggcgccaactcgcgcgtggccaa 186 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 668 gcggacgttcgaggtggacgcgatcgtgggcgcggacggcgccaactcccgcgtcgccaa 727 Query: 187 ggatatgggcgcgggcgactacgagtacgccatcgcgttccaggagcgcgtcaagatccc 246 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 ggacatgggcgccggcgactacgagtacgccatcgcgttccaggagcgcgtcaagatccc 787 Query: 247 cgacgacaagatgcgctactacgaggagcgcgccgagatgtacgtcggcgacgacgtctc 306 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 cgacgacaagatgaagtactacgaggagcgcgccgagatgtacgtcggcgacgacgtctc 847 Query: 307 ccccgacttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcac 366 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 848 gccggacttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcac 907 Query: 367 cgtcacccacaaggccgacatcaagaagttccaggccgccacccgcctccgcgccaagga 426 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 908 cgtcacccacaagcccgacatcaagaagttccaggccgccacccgccttcgcgccaagga 967 Query: 427 caagatcgagggcggcaagatcatccgcgtcgaggctcac 466 | ||||||||||||||||||||||||||||||||||||| Sbjct: 968 ccggatcgagggcggcaagatcatccgcgtcgaggctcac 1007
>dbj|AK098873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C18, full insert sequence Length = 1778 Score = 706 bits (356), Expect = 0.0 Identities = 434/460 (94%) Strand = Plus / Plus Query: 7 cggcgccgaggtcctcaatggtctcttcctaaggtacgaggagcccaaggagcgcaacgg 66 ||||||||||||| |||||||||||||||| ||||| |||| ||||||||| | |||||| Sbjct: 549 cggcgccgaggtcgtcaatggtctcttcctgaggtatgaggcgcccaaggaacccaacgg 608 Query: 67 cacgtacacggtgcactacaaccactacgacagctccaacggcaaggtgggcggcgagaa 126 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 609 gtcgtacgtggtgcactacaaccactacgacagctccaacggcaaggccggcggcgagaa 668 Query: 127 gcggtcgttcgaggtggacgcgatcgtgggcgcggacggcgccaactcgcgcgtggccaa 186 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 669 gcggacgttcgaggtggacgcgatcgtgggcgcggacggcgccaactcccgcgtcgccaa 728 Query: 187 ggatatgggcgcgggcgactacgagtacgccatcgcgttccaggagcgcgtcaagatccc 246 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 ggacatgggcgccggcgactacgagtacgccatcgcgttccaggagcgcgtcaagatccc 788 Query: 247 cgacgacaagatgcgctactacgaggagcgcgccgagatgtacgtcggcgacgacgtctc 306 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 cgacgacaagatgaagtactacgaggagcgcgccgagatgtacgtcggcgacgacgtctc 848 Query: 307 ccccgacttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcac 366 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 gccggacttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcac 908 Query: 367 cgtcacccacaaggccgacatcaagaagttccaggccgccacccgcctccgcgccaagga 426 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 909 cgtcacccacaagcccgacatcaagaagttccaggccgccacccgccttcgcgccaagga 968 Query: 427 caagatcgagggcggcaagatcatccgcgtcgaggctcac 466 | ||||||||||||||||||||||||||||||||||||| Sbjct: 969 ccggatcgagggcggcaagatcatccgcgtcgaggctcac 1008
>dbj|AK061968.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-H01, full insert sequence Length = 1828 Score = 706 bits (356), Expect = 0.0 Identities = 434/460 (94%) Strand = Plus / Plus Query: 7 cggcgccgaggtcctcaatggtctcttcctaaggtacgaggagcccaaggagcgcaacgg 66 ||||||||||||| |||||||||||||||| ||||| |||| ||||||||| | |||||| Sbjct: 548 cggcgccgaggtcgtcaatggtctcttcctgaggtatgaggcgcccaaggaacccaacgg 607 Query: 67 cacgtacacggtgcactacaaccactacgacagctccaacggcaaggtgggcggcgagaa 126 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 608 gtcgtacgtggtgcactacaaccactacgacagctccaacggcaaggccggcggcgagaa 667 Query: 127 gcggtcgttcgaggtggacgcgatcgtgggcgcggacggcgccaactcgcgcgtggccaa 186 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 668 gcggacgttcgaggtggacgcgatcgtgggcgcggacggcgccaactcccgcgtcgccaa 727 Query: 187 ggatatgggcgcgggcgactacgagtacgccatcgcgttccaggagcgcgtcaagatccc 246 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 ggacatgggcgccggcgactacgagtacgccatcgcgttccaggagcgcgtcaagatccc 787 Query: 247 cgacgacaagatgcgctactacgaggagcgcgccgagatgtacgtcggcgacgacgtctc 306 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 cgacgacaagatgaagtactacgaggagcgcgccgagatgtacgtcggcgacgacgtctc 847 Query: 307 ccccgacttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcac 366 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 848 gccggacttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcac 907 Query: 367 cgtcacccacaaggccgacatcaagaagttccaggccgccacccgcctccgcgccaagga 426 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 908 cgtcacccacaagcccgacatcaagaagttccaggccgccacccgccttcgcgccaagga 967 Query: 427 caagatcgagggcggcaagatcatccgcgtcgaggctcac 466 | ||||||||||||||||||||||||||||||||||||| Sbjct: 968 ccggatcgagggcggcaagatcatccgcgtcgaggctcac 1007
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 662 bits (334), Expect = 0.0 Identities = 406/430 (94%) Strand = Plus / Plus Query: 37 aaggtacgaggagcccaaggagcgcaacggcacgtacacggtgcactacaaccactacga 96 |||||| |||| ||||||||| | |||||| ||||| ||||||||||||||||||||| Sbjct: 31265959 aaggtatgaggcgcccaaggaacccaacgggtcgtacgtggtgcactacaaccactacga 31266018 Query: 97 cagctccaacggcaaggtgggcggcgagaagcggtcgttcgaggtggacgcgatcgtggg 156 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 31266019 cagctccaacggcaaggccggcggcgagaagcggacgttcgaggtggacgcgatcgtggg 31266078 Query: 157 cgcggacggcgccaactcgcgcgtggccaaggatatgggcgcgggcgactacgagtacgc 216 |||||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 31266079 cgcggacggcgccaactcccgcgtcgccaaggacatgggcgccggcgactacgagtacgc 31266138 Query: 217 catcgcgttccaggagcgcgtcaagatccccgacgacaagatgcgctactacgaggagcg 276 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 31266139 catcgcgttccaggagcgcgtcaagatccccgacgacaagatgaagtactacgaggagcg 31266198 Query: 277 cgccgagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaa 336 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 31266199 cgccgagatgtacgtcggcgacgacgtctcgccggacttctacggctgggtgttccccaa 31266258 Query: 337 gtgcgaccacgtcgccgtcggcaccggcaccgtcacccacaaggccgacatcaagaagtt 396 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 31266259 gtgcgaccacgtcgccgtcggcaccggcaccgtcacccacaagcccgacatcaagaagtt 31266318 Query: 397 ccaggccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcatccgcgt 456 |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 31266319 ccaggccgccacccgccttcgcgccaaggaccggatcgagggcggcaagatcatccgcgt 31266378 Query: 457 cgaggctcac 466 |||||||||| Sbjct: 31266379 cgaggctcac 31266388 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 7 cggcgccgaggtcctcaatggtctcttcctaaggta 42 ||||||||||||| |||||||||||||||| ||||| Sbjct: 31265265 cggcgccgaggtcgtcaatggtctcttcctgaggta 31265300 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cacgtacacggtgcactaca 86 |||||||||||||||||||| Sbjct: 22083296 cacgtacacggtgcactaca 22083315
>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1734_E02 Length = 168566 Score = 662 bits (334), Expect = 0.0 Identities = 406/430 (94%) Strand = Plus / Plus Query: 37 aaggtacgaggagcccaaggagcgcaacggcacgtacacggtgcactacaaccactacga 96 |||||| |||| ||||||||| | |||||| ||||| ||||||||||||||||||||| Sbjct: 145802 aaggtatgaggcgcccaaggaacccaacgggtcgtacgtggtgcactacaaccactacga 145861 Query: 97 cagctccaacggcaaggtgggcggcgagaagcggtcgttcgaggtggacgcgatcgtggg 156 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 145862 cagctccaacggcaaggccggcggcgagaagcggacgttcgaggtggacgcgatcgtggg 145921 Query: 157 cgcggacggcgccaactcgcgcgtggccaaggatatgggcgcgggcgactacgagtacgc 216 |||||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 145922 cgcggacggcgccaactcccgcgtcgccaaggacatgggcgccggcgactacgagtacgc 145981 Query: 217 catcgcgttccaggagcgcgtcaagatccccgacgacaagatgcgctactacgaggagcg 276 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 145982 catcgcgttccaggagcgcgtcaagatccccgacgacaagatgaagtactacgaggagcg 146041 Query: 277 cgccgagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaa 336 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 146042 cgccgagatgtacgtcggcgacgacgtctcgccggacttctacggctgggtgttccccaa 146101 Query: 337 gtgcgaccacgtcgccgtcggcaccggcaccgtcacccacaaggccgacatcaagaagtt 396 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 146102 gtgcgaccacgtcgccgtcggcaccggcaccgtcacccacaagcccgacatcaagaagtt 146161 Query: 397 ccaggccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcatccgcgt 456 |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 146162 ccaggccgccacccgccttcgcgccaaggaccggatcgagggcggcaagatcatccgcgt 146221 Query: 457 cgaggctcac 466 |||||||||| Sbjct: 146222 cgaggctcac 146231 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 7 cggcgccgaggtcctcaatggtctcttcctaaggta 42 ||||||||||||| |||||||||||||||| ||||| Sbjct: 145108 cggcgccgaggtcgtcaatggtctcttcctgaggta 145143
>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1118_G04 Length = 134464 Score = 662 bits (334), Expect = 0.0 Identities = 406/430 (94%) Strand = Plus / Plus Query: 37 aaggtacgaggagcccaaggagcgcaacggcacgtacacggtgcactacaaccactacga 96 |||||| |||| ||||||||| | |||||| ||||| ||||||||||||||||||||| Sbjct: 35827 aaggtatgaggcgcccaaggaacccaacgggtcgtacgtggtgcactacaaccactacga 35886 Query: 97 cagctccaacggcaaggtgggcggcgagaagcggtcgttcgaggtggacgcgatcgtggg 156 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 35887 cagctccaacggcaaggccggcggcgagaagcggacgttcgaggtggacgcgatcgtggg 35946 Query: 157 cgcggacggcgccaactcgcgcgtggccaaggatatgggcgcgggcgactacgagtacgc 216 |||||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 35947 cgcggacggcgccaactcccgcgtcgccaaggacatgggcgccggcgactacgagtacgc 36006 Query: 217 catcgcgttccaggagcgcgtcaagatccccgacgacaagatgcgctactacgaggagcg 276 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 36007 catcgcgttccaggagcgcgtcaagatccccgacgacaagatgaagtactacgaggagcg 36066 Query: 277 cgccgagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaa 336 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 36067 cgccgagatgtacgtcggcgacgacgtctcgccggacttctacggctgggtgttccccaa 36126 Query: 337 gtgcgaccacgtcgccgtcggcaccggcaccgtcacccacaaggccgacatcaagaagtt 396 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 36127 gtgcgaccacgtcgccgtcggcaccggcaccgtcacccacaagcccgacatcaagaagtt 36186 Query: 397 ccaggccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcatccgcgt 456 |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 36187 ccaggccgccacccgccttcgcgccaaggaccggatcgagggcggcaagatcatccgcgt 36246 Query: 457 cgaggctcac 466 |||||||||| Sbjct: 36247 cgaggctcac 36256 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 7 cggcgccgaggtcctcaatggtctcttcctaaggta 42 ||||||||||||| |||||||||||||||| ||||| Sbjct: 35133 cggcgccgaggtcgtcaatggtctcttcctgaggta 35168
>gb|AY104414.1| Zea mays PCO077228 mRNA sequence Length = 1117 Score = 311 bits (157), Expect = 1e-81 Identities = 174/180 (96%) Strand = Plus / Plus Query: 283 gatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaagtgcga 342 ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 11 gatgtacgtcggcgacgacntctctcccgacttctacggctgggtgttccccaagtgcga 70 Query: 343 ccacgtcgccgtcggcaccggcaccgtcacccacaaggccgacatcaagaagttccaggc 402 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 71 ccacgtcgccgtcggcaccggcaccgtcacgcacaaggccgacatcaagaagtttcaggc 130 Query: 403 cgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcatccgcgtcgaggc 462 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131 cgccacgcgcctccgcgccaaggacaagattgagggcggcaagatcatccgcgtcgaggc 190
>gb|AF055296.1|AF055296 Zantedeschia aethiopica geranylgeranyl reductase mRNA, partial cds Length = 995 Score = 210 bits (106), Expect = 3e-51 Identities = 253/302 (83%) Strand = Plus / Plus Query: 161 gacggcgccaactcgcgcgtggccaaggatatgggcgcgggcgactacgagtacgccatc 220 ||||| |||||||| ||||||||||||| || || || || ||||||||||||||||| Sbjct: 85 gacggagccaactcccgcgtggccaaggccattggtgccggggactacgagtacgccatt 144 Query: 221 gcgttccaggagcgcgtcaagatccccgacgacaagatgcgctactacgaggagcgcgcc 280 || |||||||| | || |||||||| || || |||||| |||||| ||||||| || Sbjct: 145 gccttccaggaaagggtgaagatcccggaggagaagatggagtactacaaggagcgggcg 204 Query: 281 gagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaagtgc 340 ||||||||||| || | ||||| || | |||||||||| ||||||||| || || ||| Sbjct: 205 gagatgtacgtgggagcggacgtgtcgtctgacttctacgcctgggtgtttccgaaatgc 264 Query: 341 gaccacgtcgccgtcggcaccggcaccgtcacccacaaggccgacatcaagaagttccag 400 ||||||||||||||||||||||||||||||| | |||||| |||||||||| |||||| Sbjct: 265 gaccacgtcgccgtcggcaccggcaccgtcatcgacaagggcgacatcaagcgtttccag 324 Query: 401 gccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcatccgcgtcgag 460 |||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||| Sbjct: 325 gccgccacccgcctgcgcgccggcgacaagatcgagggcggccgcatcctccgcgtcgag 384 Query: 461 gc 462 || Sbjct: 385 gc 386
>ref|NM_187998.1| Oryza sativa (japonica cultivar-group), Ozsa8418 predicted mRNA Length = 1359 Score = 151 bits (76), Expect = 2e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 215 gccatcgcgttccaggagcgcgtcaagatccccgacgacaagatgcgctactacgaggag 274 ||||||||||||||||||||| || |||||||||| ||| ||||||||| || Sbjct: 619 gccatcgcgttccaggagcgcatccgcctccccgacgaggccatggcctactacgacgac 678 Query: 275 cgcgccgagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttcccc 334 | |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| Sbjct: 679 ctcgccgagatgtacgtcggcggcgacgtctccccggacttctacggctgggtcttcccc 738 Query: 335 aagtgcgaccacgtcgccgtcggcaccggcac 366 ||||||||||||||||||||||| || ||||| Sbjct: 739 aagtgcgaccacgtcgccgtcgggacgggcac 770
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 151 bits (76), Expect = 2e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 215 gccatcgcgttccaggagcgcgtcaagatccccgacgacaagatgcgctactacgaggag 274 ||||||||||||||||||||| || |||||||||| ||| ||||||||| || Sbjct: 9017829 gccatcgcgttccaggagcgcatccgcctccccgacgaggccatggcctactacgacgac 9017888 Query: 275 cgcgccgagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttcccc 334 | |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| Sbjct: 9017889 ctcgccgagatgtacgtcggcggcgacgtctccccggacttctacggctgggtcttcccc 9017948 Query: 335 aagtgcgaccacgtcgccgtcggcaccggcac 366 ||||||||||||||||||||||| || ||||| Sbjct: 9017949 aagtgcgaccacgtcgccgtcgggacgggcac 9017980 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ggagcgcgccgagatgtacg 290 |||||||||||||||||||| Sbjct: 36290638 ggagcgcgccgagatgtacg 36290619 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gccgccacccgcctccgcgc 420 |||||||||||||||||||| Sbjct: 32315660 gccgccacccgcctccgcgc 32315679
>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0453A06 Length = 154378 Score = 151 bits (76), Expect = 2e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 215 gccatcgcgttccaggagcgcgtcaagatccccgacgacaagatgcgctactacgaggag 274 ||||||||||||||||||||| || |||||||||| ||| ||||||||| || Sbjct: 125584 gccatcgcgttccaggagcgcatccgcctccccgacgaggccatggcctactacgacgac 125643 Query: 275 cgcgccgagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttcccc 334 | |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| Sbjct: 125644 ctcgccgagatgtacgtcggcggcgacgtctccccggacttctacggctgggtcttcccc 125703 Query: 335 aagtgcgaccacgtcgccgtcggcaccggcac 366 ||||||||||||||||||||||| || ||||| Sbjct: 125704 aagtgcgaccacgtcgccgtcgggacgggcac 125735
>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0499C11 Length = 151369 Score = 151 bits (76), Expect = 2e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 215 gccatcgcgttccaggagcgcgtcaagatccccgacgacaagatgcgctactacgaggag 274 ||||||||||||||||||||| || |||||||||| ||| ||||||||| || Sbjct: 46836 gccatcgcgttccaggagcgcatccgcctccccgacgaggccatggcctactacgacgac 46895 Query: 275 cgcgccgagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttcccc 334 | |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| Sbjct: 46896 ctcgccgagatgtacgtcggcggcgacgtctccccggacttctacggctgggtcttcccc 46955 Query: 335 aagtgcgaccacgtcgccgtcggcaccggcac 366 ||||||||||||||||||||||| || ||||| Sbjct: 46956 aagtgcgaccacgtcgccgtcgggacgggcac 46987
>gb|AY826855.1| Heterocapsa triquetra clone HTGG1 chloroplast geranylgeranyl reductase/hydrogenase mRNA, complete cds; nuclear gene for chloroplast product Length = 1876 Score = 147 bits (74), Expect = 4e-32 Identities = 164/194 (84%) Strand = Plus / Plus Query: 176 cgcgtggccaaggatatgggcgcgggcgactacgagtacgccatcgcgttccaggagcgc 235 |||||||||||||| || | ||||||||||| ||||||||||| || |||||||||||| Sbjct: 854 cgcgtggccaaggagatcgaggcgggcgactatgagtacgccattgccttccaggagcgc 913 Query: 236 gtcaagatccccgacgacaagatgcgctactacgaggagcgcgccgagatgtacgtcggc 295 | ||||| || ||||||||| |||||| |||||||||| ||||||||||| || Sbjct: 914 atgcgcatccctgaggacaagatggagtactacaaggagcgcgctgagatgtacgttggt 973 Query: 296 gacgacgtctcccccgacttctacggctgggtgttccccaagtgcgaccacgtcgccgtc 355 || ||||| || || |||||||||| |||||| |||||||||| ||||||||| ||||| Sbjct: 974 gaggacgtgtcgccggacttctacgcctgggtcttccccaagtacgaccacgtggccgtg 1033 Query: 356 ggcaccggcaccgt 369 |||||||||||||| Sbjct: 1034 ggcaccggcaccgt 1047
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 113 bits (57), Expect = 5e-22 Identities = 108/125 (86%) Strand = Plus / Plus Query: 243 tccccgacgacaagatgcgctactacgaggagcgcgccgagatgtacgtcggcgacgacg 302 |||| |||||||| ||| ||||||||||||||| || ||||||||||| || ||||| | Sbjct: 69138 tcccggacgacaaaatggcctactacgaggagcgggcagagatgtacgtgggggacgatg 69197 Query: 303 tctcccccgacttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccg 362 | || || |||||||| | ||||||||||||||||||||||||||| || || ||||||| Sbjct: 69198 tttctccggacttctatgcctgggtgttccccaagtgcgaccacgtggcggtgggcaccg 69257 Query: 363 gcacc 367 ||||| Sbjct: 69258 gcacc 69262
>dbj|AK108809.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-D09, full insert sequence Length = 2726 Score = 103 bits (52), Expect = 5e-19 Identities = 202/252 (80%) Strand = Plus / Plus Query: 200 ggcgactacgagtacgccatcgcgttccaggagcgcgtcaagatccccgacgacaagatg 259 ||||| ||||| |||||||| || |||||||||||| || ||||| || ||||||||| Sbjct: 787 ggcgagtacgactacgccattgccttccaggagcgcatccgcatcccagatgacaagatg 846 Query: 260 cgctactacgaggagcgcgccgagatgtacgtcggcgacgacgtctcccccgacttctac 319 |||| ||| | | || ||||||||||| ||||| || || ||||| ||||||||| Sbjct: 847 aagcactatgagaatctggctgagatgtacgtgggcgatgatgtgtccccagacttctac 906 Query: 320 ggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacccacaag 379 ||||||||||||||||||| ||||||||| || || ||||| ||||| ||| ||||| Sbjct: 907 ggctgggtgttccccaagtacgaccacgtggcagttggcacaggcacagtcgtgaacaag 966 Query: 380 gccgacatcaagaagttccaggccgccacccgcctccgcgccaaggacaagatcgagggc 439 ||| ||||||| ||| |||| ||||||||| |||| | |||| |||| |||||| Sbjct: 967 accgccatcaagcagtaccagcaggccacccgcgaccgctcaaaggtgaagactgagggc 1026 Query: 440 ggcaagatcatc 451 |||||||||||| Sbjct: 1027 ggcaagatcatc 1038
>emb|AJ821794.1| Guillardia theta partial mRNA for geranylgeranyl reductase (ggr gene) Length = 1287 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 269 gaggagcgcgccgagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtg 328 ||||||| ||| ||||||||||||||||| ||||| || || ||||||||||| |||||| Sbjct: 586 gaggagctcgctgagatgtacgtcggcgatgacgtgtcacctgacttctacggttgggtg 645 Query: 329 ttccccaagtgcgaccacgt 348 |||||||||| ||||||||| Sbjct: 646 ttccccaagtacgaccacgt 665
>gb|AY826856.1| Isochrysis galbana clone ISGG1 chloroplast geranylgeranyl reductase/hydrogenase mRNA, complete cds; nuclear gene for chloroplast product Length = 1421 Score = 87.7 bits (44), Expect = 3e-14 Identities = 161/200 (80%) Strand = Plus / Plus Query: 161 gacggcgccaactcgcgcgtggccaaggatatgggcgcgggcgactacgagtacgccatc 220 ||||| |||||||||||| |||||||| || | ||| ||||| ||| | || || || Sbjct: 581 gacggtgccaactcgcgcacggccaaggccatcgacgccggcgagtacaactatgcgatt 640 Query: 221 gcgttccaggagcgcgtcaagatccccgacgacaagatgcgctactacgaggagcgcgcc 280 || |||||||| ||| ||||||| | || || |||||| ||||| ||||| | ||| Sbjct: 641 gccttccaggaacgcatcaagattgcggatgagaagatggcgtactatgaggacctggcc 700 Query: 281 gagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaagtgc 340 |||||||| |||||||| ||||| || |||||||| |||| |||||| |||||||||| | Sbjct: 701 gagatgtatgtcggcgatgacgtgtcgcccgacttttacgcctgggtcttccccaagtac 760 Query: 341 gaccacgtcgccgtcggcac 360 ||||| |||| ||||||||| Sbjct: 761 gaccatgtcggcgtcggcac 780
>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7 Length = 345997 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 278 gccgagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaag 337 ||||||||||| |||||| |||||| || || |||||||||| |||||| |||||||| Sbjct: 41724 gccgagatgtatgtcggcaccgacgtttcaccagacttctacgcctgggtcttccccaaa 41665 Query: 338 tgcgaccacgtcgccgtcggcaccggcacc 367 | ||||||||| ||||| |||||||||||| Sbjct: 41664 tacgaccacgtggccgtgggcaccggcacc 41635
>gb|AF069318.1|AF069318 Mesembryanthemum crystallinum geranylgeranyl hydrogenase mRNA, complete cds Length = 1639 Score = 83.8 bits (42), Expect = 5e-13 Identities = 150/186 (80%) Strand = Plus / Plus Query: 281 gagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaagtgc 340 |||||||| || || ||||| || ||||| ||||||||||| ||||| |||||||| || Sbjct: 789 gagatgtatgttggagacgatgtatccccggacttctacgggtgggtattccccaaatgt 848 Query: 341 gaccacgtcgccgtcggcaccggcaccgtcacccacaaggccgacatcaagaagttccag 400 ||||| || || || || || || || || |||||||| | |||||||||||||||||| Sbjct: 849 gaccatgtggcggtgggtacagggacagtgacccacaaatcagacatcaagaagttccag 908 Query: 401 gccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcatccgcgtcgag 460 || ||||| ||| |||| |||||||||| |||| || ||||||||||| || ||| Sbjct: 909 ctagcaacccgaacccgagccatggacaagatccagggtggaaagatcatccgggtagag 968 Query: 461 gctcac 466 |||||| Sbjct: 969 gctcac 974
>emb|AJ007789.1|NTO7789 Nicotiana tabacum mRNA for geranylgeranyl reductase Length = 1510 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 284 atgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaagtgcgac 343 |||||||| || || ||||| ||||| || || ||||| ||||| |||||||| || ||| Sbjct: 748 atgtacgtgggtgatgacgtgtcccctgatttttacgggtgggttttccccaaatgtgac 807 Query: 344 cacgtcgccgtcggcaccggcaccgtcacccacaaggccgacatcaagaagttccag 400 ||||| ||||| ||||| ||||| ||||||||||| || |||||||| || |||||| Sbjct: 808 cacgttgccgttggcactggcacagtcacccacaaagctgacatcaaaaaattccag 864
>emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome; segment 2/7 Length = 349323 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 311 gacttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcacc 367 ||||||||||| |||||||||||||||| ||||||||| ||||| ||||| |||||| Sbjct: 282344 gacttctacggttgggtgttccccaagtacgaccacgttgccgttggcacgggcacc 282400
>emb|AJ697655.1| Silene viscosa partial mRNA for putative geranylgeranyl reductase (ggr gene) Length = 453 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 281 gagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaagtgc 340 |||||||| || || || || ||||| || ||||||||||| ||||| |||||||| || Sbjct: 137 gagatgtatgttggggatgatgtctcaccagacttctacgggtgggtattccccaaatgt 196 Query: 341 gaccacgtcgccgtcggcaccggcaccgtcacccacaaggccgacatcaagaagttcca 399 ||||| || ||||| || || || ||||| || |||||| | ||||||||||||||||| Sbjct: 197 gaccatgtagccgtaggaacaggaaccgtgacacacaagtctgacatcaagaagttcca 255
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 284 atgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaagtgcgac 343 ||||||||||| | |||||| || ||||||||||||| |||||||||||||| | |||| Sbjct: 1242903 atgtacgtcggtggcgacgtttcgcccgacttctacgcgtgggtgttccccaaatacgac 1242962 Query: 344 cacgtcgccgtcggcaccggcac 366 ||||| || ||||| || ||||| Sbjct: 1242963 cacgtagcagtcggtacgggcac 1242985
>gb|AY960125.1| Medicago truncatula geranylgeranyl reductase mRNA, complete cds Length = 2242 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 281 gagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaagtgc 340 ||||||||||| || |||||||| || || || ||||| || ||||| ||||| || || Sbjct: 754 gagatgtacgtgggtgacgacgtttctcctgatttctatggttgggtattcccgaaatgt 813 Query: 341 gaccacgtcgccgtcggcaccggcaccgtcacccacaaggccgacatcaagaagttcca 399 ||||| || || ||||||||||| || || || ||||||| ||||||||||||||||| Sbjct: 814 gaccatgttgctgtcggcaccggaactgtgacacacaagggagacatcaagaagttcca 872 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 423 aggacaagatcgagggcggcaagatcatccgcgtcgaggctcac 466 ||||||||||| || |||||||| |||||||| ||||||||| Sbjct: 896 aggacaagatcttagggggcaagattatccgcgtggaggctcac 939
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 284 atgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaagtgcgac 343 ||||||||||| | |||||| || ||||||||||||| |||||||||||||| | |||| Sbjct: 377977 atgtacgtcggtggcgacgtttcgcccgacttctacgcgtgggtgttccccaaatacgac 377918 Query: 344 cacgtcgccgtcggcaccggcac 366 ||||| || ||||| || ||||| Sbjct: 377917 cacgtagcagtcggtacgggcac 377895
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 266 tacgaggagcgcgccgagatgtacgtcggcgacgacgtctcccccgacttctacggctgg 325 |||||||| | ||||||||||||||||||| ||||| || || |||||||| | |||| Sbjct: 1201898 tacgaggatctcgccgagatgtacgtcggcacagacgtgtcgccagacttctatgcctgg 1201957 Query: 326 gtgttccccaagtgcgaccacgtcgccgtcggcaccggcac 366 |||||||| || | ||||||||| || || || |||||||| Sbjct: 1201958 gtgttcccgaaatacgaccacgtggcggttggtaccggcac 1201998
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 281 gagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaagtgc 340 |||||||||||||| |||||||| || |||||||||| ||||||||||||||| | | Sbjct: 1160715 gagatgtacgtcggaacagacgtctcacctgacttctacgcctgggtgttccccaaatac 1160656 Query: 341 gaccacgtcgccgt 354 || ||||| ||||| Sbjct: 1160655 gatcacgtggccgt 1160642
>emb|AJ697654.1| Silene latifolia partial mRNA for putative geranylgeranyl reductase (ggr gene) Length = 453 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 314 ttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacc 373 |||||||| |||||||||||||| || ||||| || ||||| || || || ||||| || Sbjct: 170 ttctacggatgggtgttccccaaatgtgaccatgtagccgtaggaacaggaaccgtgaca 229 Query: 374 cacaaggccgacatcaagaagttcca 399 |||||| | ||||||||||| ||||| Sbjct: 230 cacaagtctgacatcaagaaattcca 255
>gb|DQ424963.1| Olea europaea geranylgeranyl reductase mRNA, complete cds Length = 1511 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 284 atgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaagtgcgac 343 |||||||| ||||| ||||| || || || |||||||||||||| ||||| | || || Sbjct: 742 atgtacgtaggcgatgacgtttcacctgatttctacggctgggttttcccaacatgtgat 801 Query: 344 cacgtcgccgtcggcaccggcaccgtcacccacaaggccgacatcaagaa 393 || || || |||||||| ||||| || |||||||| | |||||||||||| Sbjct: 802 catgtagctgtcggcacaggcacagtaacccacaaaggcgacatcaagaa 851
>gb|AF068686.3| Glycine max geranylgeranyl hydrogenase (Ggh) and nodule-enhanced malate dehydrogenase (Mdh) genes, complete cds Length = 5528 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 281 gagatgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaagtgc 340 ||||||||||| ||||| || || || || || |||||||| |||||||| || || || Sbjct: 1140 gagatgtacgtgggcgatgatgtttctccagatttctacgggtgggtgtttccaaaatgt 1199 Query: 341 gaccacgtcgccgtcggcaccggcaccgtcacccacaaggccgacatcaagaagttcca 399 ||||| || || || ||||| || || || || ||||||| ||||||||||||||||| Sbjct: 1200 gaccatgtggctgtaggcactggaactgtgacacacaagggggacatcaagaagttcca 1258 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 423 aggacaagatcgagggcggcaagatcatccgcgtcgaggctcac 466 |||||||||| ||| |||||||||||||| || ||||||||| Sbjct: 1282 aggacaagattttgggaggcaagatcatccgagtggaggctcac 1325
>gb|AF545585.1| Xerophyta humilis geranyl-geranyl reductase mRNA, partial cds Length = 653 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 428 aagatcgagggcggcaagatcatccgcgtcgaggc 462 |||||||| ||||| |||||||||||||||||||| Sbjct: 106 aagatcgaaggcgggaagatcatccgcgtcgaggc 140
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 300 acgtctcccccgacttctacggctgggtgttccc 333 ||||||| || ||||||||||||||||||||||| Sbjct: 305291 acgtctcgccggacttctacggctgggtgttccc 305324
>emb|AJ628861.1| Sphingomonas herbicidovorans cadR gene (partial), ORF2 and tfdB gene Length = 4522 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 158 gcggacggcgccaactcgcgcgtgg 182 ||||||||||||||||||||||||| Sbjct: 3191 gcggacggcgccaactcgcgcgtgg 3215
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 50.1 bits (25), Expect = 0.007 Identities = 100/125 (80%) Strand = Plus / Minus Query: 243 tccccgacgacaagatgcgctactacgaggagcgcgccgagatgtacgtcggcgacgacg 302 |||| |||||||| ||| |||||||| ||||| || || ||||| || || ||||| | Sbjct: 1845467 tcccggacgacaaaatggcctactacgcagagcgggcagaaatgtatgtgggggacgatg 1845408 Query: 303 tctcccccgacttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccg 362 | || || ||||| || | ||||||||| ||||||| | |||| || ||||| ||||||| Sbjct: 1845407 tttctccagacttttatgcctgggtgtttcccaagtccaaccatgtagccgtgggcaccg 1845348 Query: 363 gcacc 367 ||||| Sbjct: 1845347 gcacc 1845343
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 344 cacgtcgccgtcggcaccggcacc 367 |||||||||||||||||||||||| Sbjct: 4609473 cacgtcgccgtcggcaccggcacc 4609496
>ref|NM_106107.2| Arabidopsis thaliana geranylgeranyl reductase AT1G74470 mRNA, complete cds Length = 1648 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 314 ttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacc 373 ||||| || ||||||||||| ||||||||||| || || || || || || || || || Sbjct: 870 ttctatggttgggtgttccctaagtgcgaccatgtagctgttggaacaggtactgtgact 929 Query: 374 cacaaggccgacatcaagaagttccag 400 ||||| | |||||||||||||||||| Sbjct: 930 cacaaaggtgacatcaagaagttccag 956
>gb|BT000734.1| Arabidopsis thaliana clone RAFL08-12-D18 (R11300) putative geranylgeranyl reductase (At1g74470) mRNA, complete cds Length = 1602 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 314 ttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacc 373 ||||| || ||||||||||| ||||||||||| || || || || || || || || || Sbjct: 821 ttctatggttgggtgttccctaagtgcgaccatgtagctgttggaacaggtactgtgact 880 Query: 374 cacaaggccgacatcaagaagttccag 400 ||||| | |||||||||||||||||| Sbjct: 881 cacaaaggtgacatcaagaagttccag 907
>gb|BT000656.1| Arabidopsis thaliana clone RAFL07-09-F13 (R10827) putative geranylgeranyl reductase (At1g74470) mRNA, complete cds Length = 1629 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 314 ttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacc 373 ||||| || ||||||||||| ||||||||||| || || || || || || || || || Sbjct: 857 ttctatggttgggtgttccctaagtgcgaccatgtagctgttggaacaggtactgtgact 916 Query: 374 cacaaggccgacatcaagaagttccag 400 ||||| | |||||||||||||||||| Sbjct: 917 cacaaaggtgacatcaagaagttccag 943
>gb|AY091297.1| Arabidopsis thaliana putative geranylgeranyl reductase (At1g74470) mRNA, complete cds Length = 1435 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 314 ttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacc 373 ||||| || ||||||||||| ||||||||||| || || || || || || || || || Sbjct: 787 ttctatggttgggtgttccctaagtgcgaccatgtagctgttggaacaggtactgtgact 846 Query: 374 cacaaggccgacatcaagaagttccag 400 ||||| | |||||||||||||||||| Sbjct: 847 cacaaaggtgacatcaagaagttccag 873
>gb|AY050893.1| Arabidopsis thaliana putative geranylgeranyl reductase (At1g74470) mRNA, complete cds Length = 1648 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 314 ttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacc 373 ||||| || ||||||||||| ||||||||||| || || || || || || || || || Sbjct: 857 ttctatggttgggtgttccctaagtgcgaccatgtagctgttggaacaggtactgtgact 916 Query: 374 cacaaggccgacatcaagaagttccag 400 ||||| | |||||||||||||||||| Sbjct: 917 cacaaaggtgacatcaagaagttccag 943
>gb|AY102144.1| Arabidopsis thaliana At1g74470/F1M20_15 mRNA, complete cds Length = 1404 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 314 ttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacc 373 ||||| || ||||||||||| ||||||||||| || || || || || || || || || Sbjct: 787 ttctatggttgggtgttccctaagtgcgaccatgtagctgttggaacaggtactgtgact 846 Query: 374 cacaaggccgacatcaagaagttccag 400 ||||| | |||||||||||||||||| Sbjct: 847 cacaaaggtgacatcaagaagttccag 873
>gb|AY075688.1| Arabidopsis thaliana At1g74470/F1M20_15 mRNA, complete cds Length = 1579 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 314 ttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacc 373 ||||| || ||||||||||| ||||||||||| || || || || || || || || || Sbjct: 835 ttctatggttgggtgttccctaagtgcgaccatgtagctgttggaacaggtactgtgact 894 Query: 374 cacaaggccgacatcaagaagttccag 400 ||||| | |||||||||||||||||| Sbjct: 895 cacaaaggtgacatcaagaagttccag 921
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 308 cccgacttctacggctgggtgttcccc 334 |||||||||||||||||||| |||||| Sbjct: 160745 cccgacttctacggctgggtcttcccc 160771
>gb|AY059860.1| Arabidopsis thaliana geranylgeranyl reductase (At1g74470; F1M20.15) mRNA, complete cds Length = 1629 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 314 ttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacc 373 ||||| || ||||||||||| ||||||||||| || || || || || || || || || Sbjct: 857 ttctatggttgggtgttccctaagtgcgaccatgtagctgttggaacaggtactgtgact 916 Query: 374 cacaaggccgacatcaagaagttccag 400 ||||| | |||||||||||||||||| Sbjct: 917 cacaaaggtgacatcaagaagttccag 943
>gb|AY052328.1| Arabidopsis thaliana At1g74470/F1M20_15 mRNA, complete cds Length = 1612 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 314 ttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacc 373 ||||| || ||||||||||| ||||||||||| || || || || || || || || || Sbjct: 850 ttctatggttgggtgttccctaagtgcgaccatgtagctgttggaacaggtactgtgact 909 Query: 374 cacaaggccgacatcaagaagttccag 400 ||||| | |||||||||||||||||| Sbjct: 910 cacaaaggtgacatcaagaagttccag 936
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 311 gacttctacggctgggtgttccc 333 ||||||||||||||||||||||| Sbjct: 4557203 gacttctacggctgggtgttccc 4557181
>emb|BX816645.1|CNS0ABQC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZA04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1611 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 314 ttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacc 373 ||||| || ||||||||||| ||||||||||| || || || || || || || || || Sbjct: 840 ttctatggttgggtgttccctaagtgcgaccatgtagctgttggaacaggtactgtgact 899 Query: 374 cacaaggccgacatcaagaagttccag 400 ||||| | |||||||||||||||||| Sbjct: 900 cacaaaggtgacatcaagaagttccag 926
>gb|AC011765.6|AC011765 Arabidopsis thaliana chromosome 1 BAC F1M20 genomic sequence, complete sequence Length = 134402 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 314 ttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacc 373 ||||| || ||||||||||| ||||||||||| || || || || || || || || || Sbjct: 48461 ttctatggttgggtgttccctaagtgcgaccatgtagctgttggaacaggtactgtgact 48520 Query: 374 cacaaggccgacatcaagaagttccag 400 ||||| | |||||||||||||||||| Sbjct: 48521 cacaaaggtgacatcaagaagttccag 48547
>gb|BT002571.1| Arabidopsis thaliana geranylgeranyl reductase (At1g74470) mRNA, complete cds Length = 1555 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 314 ttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacc 373 ||||| || ||||||||||| ||||||||||| || || || || || || || || || Sbjct: 787 ttctatggttgggtgttccctaagtgcgaccatgtagctgttggaacaggtactgtgact 846 Query: 374 cacaaggccgacatcaagaagttccag 400 ||||| | |||||||||||||||||| Sbjct: 847 cacaaaggtgacatcaagaagttccag 873
>emb|Y14044.1|ATGGREDU Arabidopsis thaliana mRNA for geranylgeranyl reductase Length = 1497 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 314 ttctacggctgggtgttccccaagtgcgaccacgtcgccgtcggcaccggcaccgtcacc 373 ||||| || ||||||||||| ||||||||||| || || || || || || || || || Sbjct: 802 ttctatggttgggtgttccctaagtgcgaccatgtagctgttggaacaggtactgtgact 861 Query: 374 cacaaggccgacatcaagaagttccag 400 ||||| | |||||||||||||||||| Sbjct: 862 cacaaaggtgacatcaagaagttccag 888
>ref|XM_483681.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2454 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 415 ccgcgccaaggacaagatcgagggcg 440 ||||||||||| |||||||||||||| Sbjct: 633 ccgcgccaagggcaagatcgagggcg 658
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 415 ccgcgccaaggacaagatcgagggcg 440 ||||||||||| |||||||||||||| Sbjct: 27612339 ccgcgccaagggcaagatcgagggcg 27612364
>dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0011H15 Length = 130146 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 415 ccgcgccaaggacaagatcgagggcg 440 ||||||||||| |||||||||||||| Sbjct: 9683 ccgcgccaagggcaagatcgagggcg 9708
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 415 ccgcgccaaggacaagatcgagggcg 440 ||||||||||| |||||||||||||| Sbjct: 94629 ccgcgccaagggcaagatcgagggcg 94654
>emb|AJ786383.1| Streptomyces chartreusis HKI-249 chartreusin biosynthesis gene cluster B Length = 17540 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 tcgtgggcgcggacggcgccaactc 174 |||| |||||||||||||||||||| Sbjct: 3516 tcgtcggcgcggacggcgccaactc 3540
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 tacggctgggtgttccccaag 337 ||||||||||||||||||||| Sbjct: 1812883 tacggctgggtgttccccaag 1812863 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 gggcggcaagatcatccgcg 455 |||||||||||||||||||| Sbjct: 1673836 gggcggcaagatcatccgcg 1673855
>gb|AY061964.1| Zea mays fertilization-independent endosperm protein (FIE1) mRNA, complete cds Length = 1787 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 cgtcgccgtcggcaccggcaccgtcacc 373 ||||| ||||||||||||||||| |||| Sbjct: 1543 cgtcggcgtcggcaccggcaccggcacc 1516
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cggcaccggcaccgtcaccc 374 |||||||||||||||||||| Sbjct: 2486297 cggcaccggcaccgtcaccc 2486316
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 tcggcaccggcaccgtcacccaca 377 ||||||||||| |||||||||||| Sbjct: 2153354 tcggcaccggccccgtcacccaca 2153331
>ref|NM_190578.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1416 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ggagcgcgccgagatgtacg 290 |||||||||||||||||||| Sbjct: 1053 ggagcgcgccgagatgtacg 1072
>ref|NM_191385.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2073 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 gccgccacccgcctccgcgc 420 |||||||||||||||||||| Sbjct: 272 gccgccacccgcctccgcgc 253
>ref|XM_471729.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1485 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tcgccgtcggcaccggcacc 367 |||||||||||||||||||| Sbjct: 1240 tcgccgtcggcaccggcacc 1221
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 gatcgagggcggcaagatca 449 |||||||||||||||||||| Sbjct: 3384143 gatcgagggcggcaagatca 3384124
>gb|AY195850.1| Zea mays fertilization-independent type 2 mRNA, complete cds Length = 1780 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 cgtcgccgtcggcaccggcaccgtcacc 373 ||||| ||||||||||||||||| |||| Sbjct: 1527 cgtcggcgtcggcaccggcaccggcacc 1500
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 agatcgagggcggcaagatc 448 |||||||||||||||||||| Sbjct: 241855 agatcgagggcggcaagatc 241874
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 cgacaagatgcgctactacgagga 273 ||||||||| |||||||||||||| Sbjct: 3196203 cgacaagattcgctactacgagga 3196180
>ref|XM_504061.1| Yarrowia lipolytica CLIB122, YALI0E17391g predicted mRNA Length = 1572 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ggtacgaggagcccaaggag 58 |||||||||||||||||||| Sbjct: 1184 ggtacgaggagcccaaggag 1203
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 gacttctacggctgggtgtt 330 |||||||||||||||||||| Sbjct: 4182716 gacttctacggctgggtgtt 4182697
>emb|BX047060.1|CNS098H4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC21AC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 847 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 caaggacaagatcgagggcg 440 |||||||||||||||||||| Sbjct: 564 caaggacaagatcgagggcg 545
>emb|BX047059.1|CNS098H3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC21AC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 852 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 caaggacaagatcgagggcg 440 |||||||||||||||||||| Sbjct: 252 caaggacaagatcgagggcg 271
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 acgtcgccgtcggcaccggcaccg 368 ||||||||| |||||||||||||| Sbjct: 2980024 acgtcgccgacggcaccggcaccg 2980001
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 gatcgagggcggcaagatca 449 |||||||||||||||||||| Sbjct: 269369 gatcgagggcggcaagatca 269350
>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 11/14 Length = 318050 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 gatcgagggcggcaagatca 449 |||||||||||||||||||| Sbjct: 219966 gatcgagggcggcaagatca 219947
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 cggcaccggcaccgtcacccacaa 378 |||||||||||||| ||||||||| Sbjct: 173743 cggcaccggcaccggcacccacaa 173720
>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03, complete sequence Length = 175555 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tcgccgtcggcaccggcacc 367 |||||||||||||||||||| Sbjct: 38904 tcgccgtcggcaccggcacc 38885
>emb|CR847783.6| Zebrafish DNA sequence from clone DKEYP-2C8 in linkage group 5, complete sequence Length = 184144 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 tacaaccactacgacagctccaac 106 ||||||||||||||||||| |||| Sbjct: 2837 tacaaccactacgacagcttcaac 2814
>gb|DQ397865.1| Cenarchaeum symbiosum clone C21E02, complete sequence Length = 39981 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 aagatcgagggcggcaagatcatc 451 |||| ||||||||||||||||||| Sbjct: 24980 aagagcgagggcggcaagatcatc 24957
>gb|DQ397638.1| Cenarchaeum symbiosum clone C16E09, complete sequence Length = 40387 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 aagatcgagggcggcaagatcatc 451 |||| ||||||||||||||||||| Sbjct: 12410 aagagcgagggcggcaagatcatc 12387
>gb|DQ397615.1| Cenarchaeum symbiosum clone C20B09, complete sequence Length = 39122 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 aagatcgagggcggcaagatcatc 451 |||| ||||||||||||||||||| Sbjct: 6599 aagagcgagggcggcaagatcatc 6622
>gb|AE005950.1| Caulobacter crescentus CB15 section 276 of 359 of the complete genome Length = 12754 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 402 ccgccacccgcctccgcgccaagg 425 |||||||||||| ||||||||||| Sbjct: 4597 ccgccacccgccaccgcgccaagg 4574
>gb|AE011903.1| Xanthomonas axonopodis pv. citri str. 306, section 281 of 469 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 cgacaagatgcgctactacgagga 273 ||||||||| |||||||||||||| Sbjct: 280 cgacaagatccgctactacgagga 257
>gb|AC148918.3| Medicago truncatula chromosome 2 BAC clone mth2-44o11, complete sequence Length = 126437 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 tcggcaccggcaccgtcacc 373 |||||||||||||||||||| Sbjct: 100269 tcggcaccggcaccgtcacc 100250
>tpg|BK000086.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like C1 gene, complete cds Length = 7383 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 gccgccacccgcctccgcgc 420 |||||||||||||||||||| Sbjct: 1317 gccgccacccgcctccgcgc 1298
>gb|DQ013361.1| Lotus corniculatus var. japonicus geranylgeranyl hydrogenase (GGH) mRNA, complete cds Length = 1389 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 356 ggcaccggcaccgtcacccacaaggccgacatcaagaagttcca 399 ||||| ||||| || || ||||||| ||||||||||||||||| Sbjct: 814 ggcactggcactgtgacacacaagggagacatcaagaagttcca 857
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tcgccgtcggcaccggcacc 367 |||||||||||||||||||| Sbjct: 13825245 tcgccgtcggcaccggcacc 13825226
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 cgtcgccgtcggcaccggca 365 |||||||||||||||||||| Sbjct: 20910103 cgtcgccgtcggcaccggca 20910084
>gb|L22858.1|L22858 Autographa californica nucleopolyhedrovirus clone C6, complete genome Length = 133894 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tacgagtacgccatcgcgtt 225 |||||||||||||||||||| Sbjct: 15557 tacgagtacgccatcgcgtt 15576
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 cgtcgccgtcggcaccggca 365 |||||||||||||||||||| Sbjct: 1823504 cgtcgccgtcggcaccggca 1823485
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446B05 Length = 149145 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ggagcgcgccgagatgtacg 290 |||||||||||||||||||| Sbjct: 40515 ggagcgcgccgagatgtacg 40496
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 6.3 Identities = 68/84 (80%) Strand = Plus / Minus Query: 284 atgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaagtgcgac 343 ||||| || ||||| ||||| || || || ||||||| |||||| ||||| || | ||| Sbjct: 1934936 atgtatgtgggcgatgacgtttctccggatttctacgcctgggtattcccaaaatatgac 1934877 Query: 344 cacgtcgccgtcggcaccggcacc 367 ||||| || || |||||||||||| Sbjct: 1934876 cacgtggcggtgggcaccggcacc 1934853
>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0703B01 Length = 137445 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cacgtacacggtgcactaca 86 |||||||||||||||||||| Sbjct: 57195 cacgtacacggtgcactaca 57214
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 tcggcaccggcaccgtcacc 373 |||||||||||||||||||| Sbjct: 2969830 tcggcaccggcaccgtcacc 2969811
>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0053G03 Length = 101901 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gccgccacccgcctccgcgc 420 |||||||||||||||||||| Sbjct: 47945 gccgccacccgcctccgcgc 47964
>emb|X97972.1|SS6803CHL Synechocystis sp. PCC6803 chlP gene Length = 1260 Score = 40.1 bits (20), Expect = 6.3 Identities = 68/84 (80%) Strand = Plus / Plus Query: 284 atgtacgtcggcgacgacgtctcccccgacttctacggctgggtgttccccaagtgcgac 343 ||||| || ||||| ||||| || || || ||||||| |||||| ||||| || | ||| Sbjct: 625 atgtatgtgggcgatgacgtttctccggatttctacgcctgggtattcccaaaatatgac 684 Query: 344 cacgtcgccgtcggcaccggcacc 367 ||||| || || |||||||||||| Sbjct: 685 cacgtggcggtgggcaccggcacc 708
>ref|XM_312840.2| Anopheles gambiae str. PEST ENSANGP00000016631 (ENSANGG00000014142), mRNA Length = 815 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 caaggacaagatcgagggcg 440 |||||||||||||||||||| Sbjct: 254 caaggacaagatcgagggcg 273
>dbj|AK106438.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D06, full insert sequence Length = 1509 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ggagcgcgccgagatgtacg 290 |||||||||||||||||||| Sbjct: 716 ggagcgcgccgagatgtacg 735
>dbj|AK105689.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C02, full insert sequence Length = 1704 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tcgccgtcggcaccggcacc 367 |||||||||||||||||||| Sbjct: 1404 tcgccgtcggcaccggcacc 1385
>dbj|AK068128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C23, full insert sequence Length = 1708 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tcgccgtcggcaccggcacc 367 |||||||||||||||||||| Sbjct: 1309 tcgccgtcggcaccggcacc 1290
>gb|BT024091.1| Zea mays clone EL01N0552F10 mRNA sequence Length = 1772 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 cgtcgccgtcggcaccggcaccgtcacc 373 ||||| ||||||||||||||||| |||| Sbjct: 1517 cgtcggcgtcggcaccggcaccggcacc 1490
>gb|AY112526.1| Zea mays CL600_7 mRNA sequence Length = 1744 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 cgtcgccgtcggcaccggcaccgtcacc 373 ||||| ||||||||||||||||| |||| Sbjct: 1505 cgtcggcgtcggcaccggcaccggcacc 1478
>gb|AY858688.1| Thiocapsa roseopersicina photosynthetic gene cluster, partial sequence Length = 10603 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 298 cgacgtctcccccgacttctacggctgggtgttccc 333 |||| |||| || ||||||||||||||||| ||||| Sbjct: 4725 cgacatctcgccggacttctacggctgggtcttccc 4690
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 cgtcgccgtcggcaccggca 365 |||||||||||||||||||| Sbjct: 20836317 cgtcgccgtcggcaccggca 20836298
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 cgtcgccgtcggcaccggca 365 |||||||||||||||||||| Sbjct: 48892 cgtcgccgtcggcaccggca 48911
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ggtacgaggagcccaaggag 58 |||||||||||||||||||| Sbjct: 2053503 ggtacgaggagcccaaggag 2053484
>gb|M18857.1|NPHRLGE A.californica nuclear polyhedrosis virus ORFs encoding a delayed early protein and two late protein, complete cds Length = 3722 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tacgagtacgccatcgcgtt 225 |||||||||||||||||||| Sbjct: 2777 tacgagtacgccatcgcgtt 2796
>gb|M96361.1|NPHCUECDYS Autographa californica nuclear polyhedrosis virus EcoR1-A fragment Length = 14613 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tacgagtacgccatcgcgtt 225 |||||||||||||||||||| Sbjct: 3874 tacgagtacgccatcgcgtt 3893 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,440,183 Number of Sequences: 3902068 Number of extensions: 2440183 Number of successful extensions: 53312 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 50998 Number of HSP's gapped (non-prelim): 2294 length of query: 466 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 444 effective length of database: 17,147,199,772 effective search space: 7613356698768 effective search space used: 7613356698768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)