| Clone Name | baet13b04 |
|---|---|
| Clone Library Name | barley_pub |
>DUS8_MOUSE (O09112) Dual specificity protein phosphatase 8 (EC 3.1.3.48) (EC| 3.1.3.16) (Neuronal tyrosine threonine phosphatase 1) Length = 663 Score = 32.0 bits (71), Expect = 0.37 Identities = 19/66 (28%), Positives = 27/66 (40%) Frame = -1 Query: 207 PPPEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAETFVDSIAATTCELWRSTESA 28 P P P G+PLP S G E+ + AR S D+ +T + + Sbjct: 316 PEPLMGPAAGIPLPRLPPSTSESAATGSEAATAAREGSPSAGGDAPIPSTAPATSALQQG 375 Query: 27 LRGVLL 10 LRG+ L Sbjct: 376 LRGLHL 381
>DPOD3_HUMAN (Q15054) DNA polymerase delta subunit 3 (DNA polymerase delta| subunit p66) Length = 466 Score = 30.8 bits (68), Expect = 0.81 Identities = 18/59 (30%), Positives = 26/59 (44%) Frame = -1 Query: 207 PPPEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAETFVDSIAATTCELWRSTES 31 PPP PL+ VP PE S++ GE R ++T++D E +ES Sbjct: 352 PPPPSPPLEPVPKTEPEPPSVKSSS-GENKRKRKRVLKSKTYLDGEGCIVTEKVYESES 409
>LSD1_MOUSE (Q6ZQ88) Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Amine| oxidase flavin-containing domain protein 2) (AOF2 protein) (BRAF35-HDAC complex protein BHC110) Length = 853 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = -1 Query: 204 PPEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAET 85 PP P G+ P AG QA T G S + T AET Sbjct: 66 PPRASPPGGLAEPPGSAGPQAGPTAGPGSATPMETGIAET 105
>SYI_THIDA (Q3SHS3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 929 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -1 Query: 195 GVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAET 85 G L+G+PL HP Q VGE T+ A T + T Sbjct: 296 GQMLEGLPLWHPFQDRQVPVIVGEHVTADAGTGAVHT 332
>PDC2_CANAL (O60035) Protein PDC2| Length = 836 Score = 28.1 bits (61), Expect = 5.3 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Frame = -1 Query: 207 PPPEGVPLDGVPLPHPEAGEQASTTVGEESTSMART-----SSAETFVDSIAATTCELWR 43 PPP VP+ VP+P P Q T + S +R S+A VD A T L Sbjct: 748 PPPPPVPVP-VPVPVPSVPSQVPATSFPQDVSSSRAVRAPMSTAAVDVDMATAITKLLEY 806 Query: 42 STESALR 22 S + L+ Sbjct: 807 SASNTLK 813
>FAS_RAT (P12785) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl-ca Length = 2505 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Frame = -1 Query: 168 PHPEAGEQASTTVGEES--TSMARTSSAETFVDSIAATTC---ELWRSTESAL 25 P P + ST++ E +S+ARTSSAE V+++ + LW E A+ Sbjct: 705 PRPRSARWLSTSIPEAQWQSSLARTSSAEYNVNNLVSPVLFQEALWHVPEHAV 757
>LSD1_HUMAN (O60341) Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Amine| oxidase flavin-containing domain protein 2) (BRAF35-HDAC complex protein BHC110) Length = 852 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = -1 Query: 204 PPEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAET 85 PP P G+ P AG QA TV S + T AET Sbjct: 65 PPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAET 104
>SYL_HAEDU (Q7VM66) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 861 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -1 Query: 201 PEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAETFVDS 73 PE V +DGV P E A TT E ++ T + +TF++S Sbjct: 455 PENVVMDGVQSPIKSDPEWAKTTY-EGQPALKETDTFDTFMES 496
>FRIZ2_DROME (Q9VVX3) Protein frizzled-2 precursor (dFz2)| Length = 694 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -1 Query: 174 PLPHPEAGEQASTTVGEESTSMARTSSAETFVDSIAATT 58 P+PHP AG VG + S+ T + S+A+T+ Sbjct: 639 PIPHPYAGSGMGMPVGSAAGSLLATPYTQAGGASVASTS 677
>ANK3_HUMAN (Q12955) Ankyrin-3 (ANK-3) (Ankyrin-G)| Length = 4377 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -1 Query: 186 LDGVPLPHPEAGEQASTTVGEESTSMARTSSAETFVD 76 + G P P PE E++ +STS+ +T+ ET V+ Sbjct: 3193 IPGKPSPIPEVSEESEEEEQAKSTSLKQTTVEETAVE 3229
>SYL_ERWCT (Q6D7L6) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 860 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -1 Query: 201 PEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAETFVDS 73 PE V +DG+ P E A TTV + ++ T + +TF++S Sbjct: 455 PEDVVMDGITSPLKSNPEWAKTTVNGQ-PALRETDTFDTFMES 496
>NHS_HUMAN (Q6T4R5) Nance-Horan syndrome protein (Congenital cataracts and| dental anomalies protein) Length = 1630 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = -1 Query: 207 PPPEGVPLDGVPLPHPE---AGEQASTTVGEESTSMARTSSA 91 PPP P D PH E AGE+++ + E + + SSA Sbjct: 71 PPPLPAPADQTQPPHGEASVAGEESTAGIPEAAPAAGEASSA 112
>FAS_MOUSE (P19096) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl- Length = 2504 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Frame = -1 Query: 168 PHPEAGEQASTTVGEES--TSMARTSSAETFVDSIAATTC---ELWRSTESAL 25 P P + ST++ E +S+ARTSSAE V+++ + LW E A+ Sbjct: 705 PRPRSARWLSTSIPEAQWQSSLARTSSAEYNVNNLVSPVLFQEALWHIPEHAV 757
>RECA_GLUOX (P48289) Protein recA (Recombinase A)| Length = 345 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = -1 Query: 195 GVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAETF-VDSIAA 64 GV +D + L P+AGEQA E + ++ R+ + + VDS+AA Sbjct: 105 GVNIDDLLLSQPDAGEQAL----EIADTLVRSGAVDVLVVDSVAA 145
>TBX21_MOUSE (Q9JKD8) T-box transcription factor TBX21 (T-box protein 21)| (Transcription factor TBLYM) (T-cell-specific T-box transcription factor T-bet) Length = 530 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 4/23 (17%) Frame = -1 Query: 207 PPPEGV----PLDGVPLPHPEAG 151 PPP G P+DG P P P AG Sbjct: 93 PPPAGAEGYPPVDGYPAPDPRAG 115
>TFE3_HUMAN (P19532) Transcription factor E3| Length = 743 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Frame = -1 Query: 219 EMLMPPPEGVPLDGVPLPHPEAGEQASTTVGEESTSMART---SSAETFVDSI 70 + L PPP P PLP PEA T ++ MA SS+E +D + Sbjct: 214 QALTPPPG--PASAQPLPAPEAAHTTGPTGSAPNSPMALLTIGSSSEKEIDDV 264
>FAS_HUMAN (P49327) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl- Length = 2511 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Frame = -1 Query: 168 PHPEAGEQASTTVGEES--TSMARTSSAETFVDSIAATTC---ELWRSTESAL 25 P P + ST++ E +S+ARTSSAE V+++ + LW E A+ Sbjct: 705 PKPRSARWLSTSIPEAQWHSSLARTSSAEYNVNNLVSPVLFQEALWHVPEHAV 757
>SYL_PHOPR (Q6LN98) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 858 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -1 Query: 201 PEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAETFVDS 73 PE V +DGV P E A TT E ++ T + +TF++S Sbjct: 455 PENVVMDGVTSPIKADKEWAKTTFNGE-PALRETDTFDTFMES 496
>SYL_PHOLL (Q7N755) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 860 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = -1 Query: 201 PEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAETFVDS 73 PE V +DG+ P E A TT+ + ++ T + +TF++S Sbjct: 455 PEDVKMDGITSPIKADPEWAKTTINGQ-PALRETDTFDTFMES 496
>BCSB2_ACEXY (O82860) Cyclic di-GMP-binding protein precursor (Cellulose| synthase regulatory subunit) (Cellulose synthase protein B) (CDGBP) Length = 802 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = -1 Query: 207 PPPEGVPLDGVPLPHPEAGEQASTTVGEESTSMARTSSAETFVDSI 70 P P G L +P P+A A+ + +T+ A +SA + D++ Sbjct: 28 PQPAGSDLPPLPAAPPQAAPPAAASAAPPATTPAADASAASAADAV 73 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,491,819 Number of Sequences: 219361 Number of extensions: 327728 Number of successful extensions: 1877 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 1750 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1871 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)