ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet133h10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X15694.1|HVBRNZ1H Barley bronze 1 homologue for UDPglucose flavonol 3,0 glucosyl transferase Length = 2326 Score = 238 bits (120), Expect = 7e-60 Identities = 126/128 (98%) Strand = Plus / Plus Query: 137 gccgggacgagcctctcgttcctcaccaccgccgacaacgccgcgcagctccgcaaggcc 196 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 579 gccgggacgagcctctcgttcctcaccaccgccgacaacgccgcccagctccgcaaggcc 638 Query: 197 ggcgcgctcccgggcaacctgcgcttcgtcgaggtcccggacggggtgccgccgggcgag 256 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 ggcgcgctccccggcaacctgcgcttcgtcgaggtcccggacggggtgccgccgggcgag 698 Query: 257 acgtcgtg 264 |||||||| Sbjct: 699 acgtcgtg 706 Score = 210 bits (106), Expect = 2e-51 Identities = 106/106 (100%) Strand = Plus / Plus Query: 3 aatcaaaaccaaacaaaaccaccgacaccacgatggcgcccccgccgccgcacatcgccg 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 aatcaaaaccaaacaaaaccaccgacaccacgatggcgcccccgccgccgcacatcgccg 504 Query: 63 tggtggccttccccttcagctcccacgcggccgtgctcttctcgtt 108 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 tggtggccttccccttcagctcccacgcggccgtgctcttctcgtt 550
>gb|AF391808.2| Zea mays chromosome 9S bz genomic region strain McC Length = 226001 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 115099 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 115156 Score = 61.9 bits (31), Expect = 9e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| |||||||||||||||||||| |||||||| Sbjct: 115280 gctcccggggaacctgcgcttcgtcgaggtaccggacgg 115318
>gb|AF448416.1| Zea mays B73 chromosome 9S bz genomic region Length = 106186 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 32974 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 33031 Score = 61.9 bits (31), Expect = 9e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| |||||||||||||||||||| |||||||| Sbjct: 33155 gctcccggggaacctgcgcttcgtcgaggtaccggacgg 33193
>emb|X07937.1|ZMBZW22 Maize Bz-W22 gene for UDPglucose flavonoid glycosyl transferase Length = 2908 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 909 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 966 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 1090 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 1128
>emb|X07941.1|ZMBZR Maize bronze bz-R gene resulting in absence of UDPglucose flavonoid glycosyl transferase Length = 3181 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 1320 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 1377 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 1501 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 1539
>gb|AY191010.1| Zea mays Bz(Dp26)-m1 bz locus tandem duplication sequence Length = 8867 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 6987 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 7044 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 82 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 139 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 7168 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 7206 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 263 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 301
>gb|AY191009.1| Zea mays Bz(Dp26) bz locus tandem duplication sequence Length = 4294 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 2414 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 2471 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 82 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 139 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 2595 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 2633 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 263 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 301
>gb|AY167679.1| Zea mays UDP-glucose flavonoid-3-O-glucosyltransferase-like (bz) gene, bz-E9 allele, partial sequence Length = 1521 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 26 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 83 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 207 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 245
>gb|AY167678.1| Zea mays UDP-glucose flavonoid-3-O-glucosyltransferase-like (bz) gene, bz-E8 allele, partial sequence Length = 1521 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 26 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 83 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 207 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 245
>gb|AY167677.1| Zea mays UDP-glucose flavonoid-3-O-glucosyltransferase-like (bz) gene, bz-E7 allele, partial sequence Length = 1521 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 26 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 83 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 207 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 245
>gb|AY167676.1| Zea mays UDP-glucose flavonoid-3-O-glucosyltransferase-like (bz) gene, bz-E6 allele, partial sequence Length = 1521 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 26 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 83 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 207 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 245
>gb|AY167675.1| Zea mays mutant UDP-glucose flavonoid-3-O-glucosyltransferase (bz) gene, bz-E5 allele, complete cds Length = 1521 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 26 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 83 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 207 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 245
>gb|AY167674.1| Zea mays UDP-glucose flavonoid-3-O-glucosyltransferase-like (bz) gene, bz-E4 allele, partial sequence Length = 1521 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 26 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 83 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 207 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 245
>gb|AY167673.1| Zea mays UDP-glucose flavonoid-3-O-glucosyltransferase-like (bz) gene, bz-E3 allele, partial sequence Length = 1521 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 26 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 83 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 207 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 245
>gb|AY167672.1| Zea mays mutant UDP-glucose flavonoid-3-O-glucosyltransferase (bz) gene, bz-E2 allele, complete cds Length = 1521 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 26 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 83 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 207 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 245
>emb|X13502.1|ZMW22BZ1 Maize (Bz-W22 allele) bronze-1 cDNA for UFGT (UDPglucose:flavonol 3-0-glucosyltransferase) Length = 1594 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 103 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 160 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 284 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 322
>emb|X13501.1|ZMMC2BZ1 Maize (Bz-McC2 allele) bz1 gene for UFGT (UDPglucose:flavonol 3-0-glucosyltransferase) Length = 2531 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 667 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 724 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 848 gctcccggggaacctgcgcttcgtcgaggtcccggacgg 886
>emb|X13500.1|ZMMCCBZ1 Zea mays (Bz-McC allele) bz1 gene for UFGT (UDPglucose:flavonol 3-0-glucosyltransferase) Length = 2919 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 672 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 729 Score = 61.9 bits (31), Expect = 9e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| |||||||||||||||||||| |||||||| Sbjct: 853 gctcccggggaacctgcgcttcgtcgaggtaccggacgg 891
>gb|AY110944.1| Zea mays CL2075_1 mRNA sequence Length = 1416 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 26 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 83 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgagg 230 ||||||||| ||||||||||||||||||| Sbjct: 207 gctcccggggaacctgcgcttcgtcgagg 235
>gb|DQ335126.1| Zea mays UDPG-flavonoid 3-oxy glucosyl transferase (bronze) mRNA, bronze-Bz1-McC allele, complete cds Length = 1726 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 101 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 158 Score = 61.9 bits (31), Expect = 9e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| |||||||||||||||||||| |||||||| Sbjct: 282 gctcccggggaacctgcgcttcgtcgaggtaccggacgg 320
>gb|AY664416.1| Zea mays cultivar Mo17 locus bz, complete sequence Length = 203581 Score = 75.8 bits (38), Expect = 6e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 42 ccccgccgccgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgct 99 |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 41728 ccccgccgccgcacgtggccgtggtcgccttcccgttcagctcccacgcggcggtgct 41785 Score = 61.9 bits (31), Expect = 9e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 202 gctcccgggcaacctgcgcttcgtcgaggtcccggacgg 240 ||||||||| |||||||||||||||||||| |||||||| Sbjct: 41909 gctcccggggaacctgcgcttcgtcgaggtaccggacgg 41947
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 69.9 bits (35), Expect = 4e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 51 cgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgctcttctc 105 ||||| |||||||||| |||||||||||||||||||||| ||||||||| |||| Sbjct: 4658775 cgcacgtcgccgtggtcaccttccccttcagctcccacgccgccgtgctcctctc 4658829 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 33 cgatggcgcccccgccgccgcacat 57 |||||||||| |||||||||||||| Sbjct: 26460130 cgatggcgccgccgccgccgcacat 26460154 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cgccgccgcacatcgccgtg 64 |||||||||||||||||||| Sbjct: 18719809 cgccgccgcacatcgccgtg 18719790
>dbj|AP004738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0090D06 Length = 174500 Score = 69.9 bits (35), Expect = 4e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 51 cgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgctcttctc 105 ||||| |||||||||| |||||||||||||||||||||| ||||||||| |||| Sbjct: 146139 cgcacgtcgccgtggtcaccttccccttcagctcccacgccgccgtgctcctctc 146193
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 69.9 bits (35), Expect = 4e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 51 cgcacatcgccgtggtggccttccccttcagctcccacgcggccgtgctcttctc 105 ||||| |||||||||| |||||||||||||||||||||| ||||||||| |||| Sbjct: 21374 cgcacgtcgccgtggtcaccttccccttcagctcccacgccgccgtgctcctctc 21428
>ref|XM_476626.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1604 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 50 ccgcacatcgccgtggtggccttccccttcagctcccacgc 90 |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 78 ccgcacgtcgccgtggtggctttccccttcagctcccacgc 118
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 50 ccgcacatcgccgtggtggccttccccttcagctcccacgc 90 |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 2521027 ccgcacgtcgccgtggtggctttccccttcagctcccacgc 2521067
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 50 ccgcacatcgccgtggtggccttccccttcagctcccacgc 90 |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 86007 ccgcacgtcgccgtggtggctttccccttcagctcccacgc 86047
>dbj|AK106312.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-D06, full insert sequence Length = 1604 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 50 ccgcacatcgccgtggtggccttccccttcagctcccacgc 90 |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 78 ccgcacgtcgccgtggtggctttccccttcagctcccacgc 118
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 tcctcaccaccgccgacaacgccgc 180 |||||||||||||||||| |||||| Sbjct: 2288657 tcctcaccaccgccgacatcgccgc 2288681
>gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, complete sequence Length = 162020 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 aaaatcaaaaccaaacaaaac 21 ||||||||||||||||||||| Sbjct: 79083 aaaatcaaaaccaaacaaaac 79063
>gb|AC139938.5| Mus musculus chromosome 6, clone RP23-10C7, complete sequence Length = 228748 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 aaaatcaaaaccaaacaaaac 21 ||||||||||||||||||||| Sbjct: 131765 aaaatcaaaaccaaacaaaac 131745
>gb|AC123811.3| Mus musculus BAC clone RP24-179L19 from chromosome 9, complete sequence Length = 204171 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaaccacc 25 ||||||||||| ||||||||||||| Sbjct: 128490 aaaatcaaaacaaaacaaaaccacc 128514
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 ctcgttcctcaccaccgccga 171 ||||||||||||||||||||| Sbjct: 272152 ctcgttcctcaccaccgccga 272172
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 cgtcgaggtcccggacggggtgccg 247 |||||||| |||||||||||||||| Sbjct: 195398 cgtcgaggacccggacggggtgccg 195422
>gb|AC027307.5| Homo sapiens chromosome 19 clone CTB-25B13, complete sequence Length = 153570 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccttcagctcccacgcgg 92 ||||||||||||||||||||| Sbjct: 72376 tccccttcagctcccacgcgg 72396
>emb|AL844603.5| Mouse DNA sequence from clone RP24-334I20 on chromosome 2, complete sequence Length = 144391 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 aaaatcaaaaccaaacaaaac 21 ||||||||||||||||||||| Sbjct: 15120 aaaatcaaaaccaaacaaaac 15100
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0709F06 Length = 170964 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 33 cgatggcgcccccgccgccgcacat 57 |||||||||| |||||||||||||| Sbjct: 72169 cgatggcgccgccgccgccgcacat 72193
>gb|AC105165.11| Mus musculus chromosome 18, clone RP24-302C24, complete sequence Length = 186431 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaaccacc 25 |||||||||||||||| |||||||| Sbjct: 34161 aaaatcaaaaccaaactaaaccacc 34185
>gb|AC132103.3| Mus musculus BAC clone RP24-363K20 from 9, complete sequence Length = 192053 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaaccacc 25 ||||||||||| ||||||||||||| Sbjct: 49176 aaaatcaaaacaaaacaaaaccacc 49200
>gb|AC130654.2| Mus musculus strain C57BL/6J chromosome 18 clone rp23-410i12, complete sequence Length = 186254 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 aaaatcaaaaccaaacaaaaccacc 25 |||||||||||||||| |||||||| Sbjct: 21738 aaaatcaaaaccaaactaaaccacc 21714
>emb|AL732571.8| Mouse DNA sequence from clone RP23-23D11 on chromosome 4, complete sequence Length = 214061 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaaccacc 25 |||| |||||||||||||||||||| Sbjct: 10754 aaaaacaaaaccaaacaaaaccacc 10778
>gb|AC168314.2| Mus musculus BAC clone RP24-229J18 from chromosome 8, complete sequence Length = 191850 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 aaatcaaaaccaaacaaaac 21 |||||||||||||||||||| Sbjct: 113410 aaatcaaaaccaaacaaaac 113391
>ref|XM_474429.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2073 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tcctcaccaccgccgacaac 175 |||||||||||||||||||| Sbjct: 1996 tcctcaccaccgccgacaac 1977
>ref|XM_466943.1| Oryza sativa (japonica cultivar-group), mRNA Length = 504 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 gcgcccccgccgccgcacatcgcc 61 |||||||||||||||||| ||||| Sbjct: 131 gcgcccccgccgccgcacgtcgcc 108
>gb|AC167019.4| Mus musculus BAC clone RP23-262K24 from chromosome 15, complete sequence Length = 207785 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 153488 aaaatcaaaaccaaacaaaa 153507
>gb|AF130357.2| Mus musculus chromosome X clone CT7-148C10, complete sequence Length = 106724 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 69065 aaaatcaaaaccaaacaaaa 69084
>ref|XM_421240.1| PREDICTED: Gallus gallus similar to putative phosphatase subunit (LOC423324), mRNA Length = 1665 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 aaaatcaaaaccaaacaaaaccac 24 |||| ||||||||||||||||||| Sbjct: 1638 aaaaacaaaaccaaacaaaaccac 1615
>gb|AC121537.9| Mus musculus chromosome 8, clone RP24-394O10, complete sequence Length = 218348 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 aaatcaaaaccaaacaaaac 21 |||||||||||||||||||| Sbjct: 72470 aaatcaaaaccaaacaaaac 72489
>gb|AC125483.4| Mus musculus BAC clone RP23-109I9 from chromosome 1, complete sequence Length = 201732 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 152834 aaaatcaaaaccaaacaaaa 152853
>gb|AC124479.4| Mus musculus BAC clone RP24-113I12 from chromosome 15, complete sequence Length = 161246 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 89270 aaaatcaaaaccaaacaaaa 89289
>gb|AC133654.4| Mus musculus BAC clone RP24-332N10 from chromosome 15, complete sequence Length = 194622 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 189595 aaaatcaaaaccaaacaaaa 189576
>gb|AC124385.3| Mus musculus BAC clone RP24-421A2 from chromosome 1, complete sequence Length = 163778 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaaccac 24 |||| ||||||||||||||||||| Sbjct: 152200 aaaaacaaaaccaaacaaaaccac 152223
>gb|AC115119.5| Mus musculus BAC clone RP23-87M19 from 18, complete sequence Length = 174491 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 8681 aaaatcaaaaccaaacaaaa 8700
>gb|AC137995.31| Medicago truncatula clone mth2-11j1, complete sequence Length = 146749 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 57580 aaaatcaaaaccaaacaaaa 57561
>emb|AL627108.6| Human DNA sequence from clone RP11-56B8 on chromosome 6, complete sequence Length = 32303 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 29402 aaaatcaaaaccaaacaaaa 29383
>gb|AE014819.1| Plasmodium falciparum 3D7 chromosome 14 section 4 of 13 of the complete sequence Length = 251448 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 aaatcaaaaccaaacaaaac 21 |||||||||||||||||||| Sbjct: 165834 aaatcaaaaccaaacaaaac 165853
>emb|AL354766.17| Human DNA sequence from clone RP11-323C15 on chromosome 20 Contains an RPL13 (ribosomal protein L13) pseudogene, a novel gene, the 5' end of the EYA2 gene for eyes absent homolog 2 (Drosophila) and a CpG island, complete sequence Length = 111170 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 aaaatcaaaaccaaacaaaaccac 24 |||| ||||||||||||||||||| Sbjct: 43399 aaaagcaaaaccaaacaaaaccac 43376
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 tcctcaccaccgccgacaac 175 |||||||||||||||||||| Sbjct: 58659 tcctcaccaccgccgacaac 58678
>gb|AC097636.2| Homo sapiens chromosome 3 clone RP11-314A5, complete sequence Length = 214687 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaaccac 24 |||| ||||||||||||||||||| Sbjct: 56314 aaaaacaaaaccaaacaaaaccac 56337
>gb|AC157021.6| Mus musculus 10 BAC RP24-328K10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 175825 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 123858 aaaatcaaaaccaaacaaaa 123877
>gb|AE008686.1|AE008686 Mus musculus T-cell receptor alpha/delta locus section 4 of 4 of the complete region Length = 461875 Score = 40.1 bits (20), Expect = 3.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaaccaccgacacca 32 |||| |||||| ||||||||||||| |||||| Sbjct: 227036 aaaaacaaaacaaaacaaaaccaccaacacca 227067
>gb|AC159987.5| Mus musculus 10 BAC RP23-475N14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 172772 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 caaaaccaaacaaaaccacc 25 |||||||||||||||||||| Sbjct: 31459 caaaaccaaacaaaaccacc 31478
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 tcctcaccaccgccgacaac 175 |||||||||||||||||||| Sbjct: 35122156 tcctcaccaccgccgacaac 35122175
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 gcgcccccgccgccgcacatcgcc 61 |||||||||||||||||| ||||| Sbjct: 25561391 gcgcccccgccgccgcacgtcgcc 25561414
>gb|AC009975.9| Homo sapiens BAC clone RP11-460M2 from 2, complete sequence Length = 211305 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 122786 aaaatcaaaaccaaacaaaa 122805
>gb|AC009496.3| Homo sapiens BAC clone RP11-500G18 from 2, complete sequence Length = 96843 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 caaaaccaaacaaaaccacc 25 |||||||||||||||||||| Sbjct: 65210 caaaaccaaacaaaaccacc 65191
>gb|AE014846.1| Plasmodium falciparum 3D7 chromosome 12, section 3 of 9 of the complete sequence Length = 253132 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 152668 aaaatcaaaaccaaacaaaa 152687
>gb|AF003627.3| Homo sapiens chromosome X multiple clones map q28, complete sequence Length = 184788 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 53954 aaaatcaaaaccaaacaaaa 53973
>gb|AC093576.3| Homo sapiens chromosome 1 clone RP11-359C24, complete sequence Length = 185461 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 109691 aaaatcaaaaccaaacaaaa 109710
>dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0077L03 Length = 171177 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cgccgccgcacatcgccgtg 64 |||||||||||||||||||| Sbjct: 45560 cgccgccgcacatcgccgtg 45541
>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014E22 Length = 157627 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 gcgcccccgccgccgcacatcgcc 61 |||||||||||||||||| ||||| Sbjct: 31438 gcgcccccgccgccgcacgtcgcc 31461
>dbj|AP004067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1581_H09 Length = 86699 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 gcgcccccgccgccgcacatcgcc 61 |||||||||||||||||| ||||| Sbjct: 52790 gcgcccccgccgccgcacgtcgcc 52813
>dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD19 Length = 87286 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 atcaaaaccaaacaaaacca 23 |||||||||||||||||||| Sbjct: 18533 atcaaaaccaaacaaaacca 18514
>gb|AC005835.1|AC005835 Mus musculus clone UWGC:mbac82 from 14D1-D2 (T-Cell Receptor Alpha Locus), complete sequence Length = 132297 Score = 40.1 bits (20), Expect = 3.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaaccaccgacacca 32 |||| |||||| ||||||||||||| |||||| Sbjct: 64011 aaaaacaaaacaaaacaaaaccaccaacacca 64042
>dbj|AK110404.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-G03, full insert sequence Length = 2518 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tcctcaccaccgccgacaac 175 |||||||||||||||||||| Sbjct: 2280 tcctcaccaccgccgacaac 2261
>gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, complete sequence Length = 183177 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 35269 aaaatcaaaaccaaacaaaa 35250
>gb|AC132613.4| Mus musculus BAC clone RP23-285C21 from 6, complete sequence Length = 221317 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 46876 aaaatcaaaaccaaacaaaa 46857
>gb|AY108330.1| Zea mays PCO112753 mRNA sequence Length = 1007 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gcgcagctccgcaaggccgg 198 |||||||||||||||||||| Sbjct: 419 gcgcagctccgcaaggccgg 438
>gb|AC156271.5| Mus musculus 10 BAC RP24-317L8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 191073 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 caaaaccaaacaaaaccacc 25 |||||||||||||||||||| Sbjct: 91472 caaaaccaaacaaaaccacc 91453
>emb|CT797314.2| Pan troglodytes chromosome X clone CH251-171B18 map Xq28, complete sequence Length = 178731 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 148145 aaaatcaaaaccaaacaaaa 148164
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 tcctcaccaccgccgacaac 175 |||||||||||||||||||| Sbjct: 77280 tcctcaccaccgccgacaac 77299
>gb|AC119962.25| Mus musculus chromosome 14, clone RP24-468L11, complete sequence Length = 141600 Score = 40.1 bits (20), Expect = 3.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 1 aaaatcaaaaccaaacaaaaccaccgacacca 32 |||| |||||| ||||||||||||| |||||| Sbjct: 49634 aaaaacaaaacaaaacaaaaccaccaacacca 49603
>gb|AC124707.4| Mus musculus BAC clone RP24-73H16 from 12, complete sequence Length = 196237 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaaccac 24 |||||||||||||||| ||||||| Sbjct: 29521 aaaatcaaaaccaaaccaaaccac 29544
>gb|AC142410.4| Mus musculus BAC clone RP24-173I18 from 1, complete sequence Length = 145213 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 aaaatcaaaaccaaacaaaaccac 24 |||| ||||||||||||||||||| Sbjct: 83332 aaaaacaaaaccaaacaaaaccac 83309
>emb|AL929037.3| Mouse DNA sequence from clone RP23-297K24 on chromosome 2, complete sequence Length = 156705 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaaccac 24 |||| ||||||||||||||||||| Sbjct: 94960 aaaaacaaaaccaaacaaaaccac 94983
>gb|M60875.1|MSGORF Mycobacterium fortuitum DNA sequence, ORFs 1 and 2 Length = 4821 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 caccgccgacaacgccgcgc 182 |||||||||||||||||||| Sbjct: 3137 caccgccgacaacgccgcgc 3156
>emb|AL807394.9| Mouse DNA sequence from clone RP23-304N5 on chromosome X, complete sequence Length = 161674 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaatcaaaaccaaacaaaa 20 |||||||||||||||||||| Sbjct: 130568 aaaatcaaaaccaaacaaaa 130587 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,957,664 Number of Sequences: 3902068 Number of extensions: 1957664 Number of successful extensions: 77444 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76978 Number of HSP's gapped (non-prelim): 466 length of query: 265 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 243 effective length of database: 17,147,199,772 effective search space: 4166769544596 effective search space used: 4166769544596 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
