ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet133a11 |
|---|---|
| Clone Library Name | barley_pub |
>FUMC_STAS1 (Q49YP8) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)| Length = 461 Score = 28.1 bits (61), Expect = 7.3 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +3 Query: 21 PFFSSEKKPHTLMAKDEVMETGG 89 PF SSE K H L A DEV++ G Sbjct: 255 PFVSSENKFHALTAHDEVVQLHG 277
>FUMC_STAAW (Q8NVV1) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)| Length = 461 Score = 28.1 bits (61), Expect = 7.3 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +3 Query: 21 PFFSSEKKPHTLMAKDEVMETGG 89 PF SSE K H L A DEV++ G Sbjct: 255 PFVSSENKFHALTAHDEVVQLHG 277
>FUMC_STAAS (Q6G884) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)| Length = 461 Score = 28.1 bits (61), Expect = 7.3 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +3 Query: 21 PFFSSEKKPHTLMAKDEVMETGG 89 PF SSE K H L A DEV++ G Sbjct: 255 PFVSSENKFHALTAHDEVVQLHG 277
>FUMC_STAAR (Q6GFK5) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)| Length = 461 Score = 28.1 bits (61), Expect = 7.3 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +3 Query: 21 PFFSSEKKPHTLMAKDEVMETGG 89 PF SSE K H L A DEV++ G Sbjct: 255 PFVSSENKFHALTAHDEVVQLHG 277
>FUMC_STAAN (P64173) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)| Length = 461 Score = 28.1 bits (61), Expect = 7.3 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +3 Query: 21 PFFSSEKKPHTLMAKDEVMETGG 89 PF SSE K H L A DEV++ G Sbjct: 255 PFVSSENKFHALTAHDEVVQLHG 277
>FUMC_STAAM (P64172) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)| Length = 461 Score = 28.1 bits (61), Expect = 7.3 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +3 Query: 21 PFFSSEKKPHTLMAKDEVMETGG 89 PF SSE K H L A DEV++ G Sbjct: 255 PFVSSENKFHALTAHDEVVQLHG 277
>FUMC_STAAC (Q5HES4) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)| Length = 461 Score = 28.1 bits (61), Expect = 7.3 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +3 Query: 21 PFFSSEKKPHTLMAKDEVMETGG 89 PF SSE K H L A DEV++ G Sbjct: 255 PFVSSENKFHALTAHDEVVQLHG 277 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,717,869 Number of Sequences: 219361 Number of extensions: 124161 Number of successful extensions: 466 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 439 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 465 length of database: 80,573,946 effective HSP length: 9 effective length of database: 78,599,697 effective search space used: 1886392728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
