ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet133a11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF139814.1|AF139814 Triticum aestivum plasma membrane intrinsic protein 1 (PIP1) mRNA, complete cds Length = 1283 Score = 87.7 bits (44), Expect = 6e-15 Identities = 47/48 (97%) Strand = Plus / Plus Query: 56 gatggcgaaggacgaggtgatggagaccggcggcggcggcgacttcgc 103 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 gatggccaaggacgaggtgatggagaccggcggcggcggcgacttcgc 121
>ref|NM_187092.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1242 Score = 52.0 bits (26), Expect = 3e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 57 atggcgaaggacgaggtgatggagaccggcggcg 90 |||| |||||||||||||||||||| |||||||| Sbjct: 108 atggggaaggacgaggtgatggagagcggcggcg 141
>ref|XM_507363.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117 mRNA Length = 1257 Score = 52.0 bits (26), Expect = 3e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 57 atggcgaaggacgaggtgatggagaccggcggcg 90 |||| |||||||||||||||||||| |||||||| Sbjct: 110 atggggaaggacgaggtgatggagagcggcggcg 143
>ref|XM_506304.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117 mRNA Length = 1298 Score = 52.0 bits (26), Expect = 3e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 57 atggcgaaggacgaggtgatggagaccggcggcg 90 |||| |||||||||||||||||||| |||||||| Sbjct: 111 atggggaaggacgaggtgatggagagcggcggcg 144
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 52.0 bits (26), Expect = 3e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 57 atggcgaaggacgaggtgatggagaccggcggcg 90 |||| |||||||||||||||||||| |||||||| Sbjct: 15352972 atggggaaggacgaggtgatggagagcggcggcg 15353005 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 29171777 gatggagatcggcggcggcggcg 29171755 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 gaccggcggcggcggcgac 98 ||||||||||||||||||| Sbjct: 8926285 gaccggcggcggcggcgac 8926303 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 ggcggcggcggcgacttcg 102 ||||||||||||||||||| Sbjct: 3958411 ggcggcggcggcgacttcg 3958429
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 52.0 bits (26), Expect = 3e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 57 atggcgaaggacgaggtgatggagaccggcggcg 90 |||| |||||||||||||||||||| |||||||| Sbjct: 59971 atggggaaggacgaggtgatggagagcggcggcg 60004
>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0475E07 Length = 139961 Score = 52.0 bits (26), Expect = 3e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 57 atggcgaaggacgaggtgatggagaccggcggcg 90 |||| |||||||||||||||||||| |||||||| Sbjct: 138985 atggggaaggacgaggtgatggagagcggcggcg 139018
>dbj|AK119656.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-H04, full insert sequence Length = 1216 Score = 52.0 bits (26), Expect = 3e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 57 atggcgaaggacgaggtgatggagaccggcggcg 90 |||| |||||||||||||||||||| |||||||| Sbjct: 108 atggggaaggacgaggtgatggagagcggcggcg 141
>dbj|AK103970.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B05, full insert sequence Length = 1242 Score = 52.0 bits (26), Expect = 3e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 57 atggcgaaggacgaggtgatggagaccggcggcg 90 |||| |||||||||||||||||||| |||||||| Sbjct: 108 atggggaaggacgaggtgatggagagcggcggcg 141
>dbj|AK103938.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G03, full insert sequence Length = 1257 Score = 52.0 bits (26), Expect = 3e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 57 atggcgaaggacgaggtgatggagaccggcggcg 90 |||| |||||||||||||||||||| |||||||| Sbjct: 110 atggggaaggacgaggtgatggagagcggcggcg 143
>dbj|AK072519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128K12, full insert sequence Length = 1298 Score = 52.0 bits (26), Expect = 3e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 57 atggcgaaggacgaggtgatggagaccggcggcg 90 |||| |||||||||||||||||||| |||||||| Sbjct: 111 atggggaaggacgaggtgatggagagcggcggcg 144
>gb|AF062393.1|AF062393 Oryza sativa aquaporin (PIP2a) mRNA, complete cds Length = 1328 Score = 52.0 bits (26), Expect = 3e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 57 atggcgaaggacgaggtgatggagaccggcggcg 90 |||| |||||||||||||||||||| |||||||| Sbjct: 98 atggggaaggacgaggtgatggagagcggcggcg 131
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttcgc 103 ||||||||||||||||||||| Sbjct: 1482675 cggcggcggcggcgacttcgc 1482695 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttcgc 103 ||||||||||||||||||||| Sbjct: 1481001 cggcggcggcggcgacttcgc 1481021 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttcgc 103 ||||||||||||||||||||| Sbjct: 1479327 cggcggcggcggcgacttcgc 1479347
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttcgc 103 ||||||||||||||||||||| Sbjct: 98417 cggcggcggcggcgacttcgc 98437 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttcgc 103 ||||||||||||||||||||| Sbjct: 96743 cggcggcggcggcgacttcgc 96763
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttcgc 103 ||||||||||||||||||||| Sbjct: 164895 cggcggcggcggcgacttcgc 164915 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttcgc 103 ||||||||||||||||||||| Sbjct: 163221 cggcggcggcggcgacttcgc 163241
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ccggcggcggcggcgacttcg 102 ||||||||||||||||||||| Sbjct: 4502 ccggcggcggcggcgacttcg 4522
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ccggcggcggcggcgacttcg 102 ||||||||||||||||||||| Sbjct: 23839629 ccggcggcggcggcgacttcg 23839649 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 ccggcggcggcggcgactt 100 ||||||||||||||||||| Sbjct: 25444089 ccggcggcggcggcgactt 25444107 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 20920366 gatggagaccggcggcggc 20920348 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 826218 cggcggcggcggcgacttc 826200
>gb|AE005088.1| Halobacterium sp. NRC-1 section 119 of 170 of the complete genome Length = 11020 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ccggcggcggcggcgacttcg 102 ||||||||||||||||||||| Sbjct: 10741 ccggcggcggcggcgacttcg 10721
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcggcggcggcgacttcgc 103 ||||||||||||||||||||| Sbjct: 2603399 cggcggcggcggcgacttcgc 2603379
>gb|AD000018.1|MSGY151 Mycobacterium tuberculosis sequence from clone y151 Length = 37036 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggcggcggcggcgacttcgc 103 ||||||||||||||||||||| Sbjct: 35526 cggcggcggcggcgacttcgc 35506 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 gcggcggcggcgacttcgc 103 ||||||||||||||||||| Sbjct: 33853 gcggcggcggcgacttcgc 33835
>ref|XM_510606.1| PREDICTED: Pan troglodytes similar to H2A histone family, member V isoform 1; purine-rich binding element protein B; histone H2A.F/Z variant (LOC453664), mRNA Length = 714 Score = 40.1 bits (20), Expect = 1.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 69 gaggtgatggagaccggcggcggcggcg 96 ||||||| ||||| |||||||||||||| Sbjct: 49 gaggtgaaggagagcggcggcggcggcg 76
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gagaccggcggcggcggcga 97 |||||||||||||||||||| Sbjct: 3059496 gagaccggcggcggcggcga 3059477
>ref|NM_001025622.1| Canis familiaris short stature homeobox (SHOX), mRNA Length = 876 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggcg 96 |||||||||||||||||||| Sbjct: 51 ggagaccggcggcggcggcg 70
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 agaccggcggcggcggcgac 98 |||||||||||||||||||| Sbjct: 21644979 agaccggcggcggcggcgac 21644998 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 16468594 gatggagagcggcggcggcggcg 16468572 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 10664713 cggcggcggcggcgacttc 10664731 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 ggcggcggcggcgacttcg 102 ||||||||||||||||||| Sbjct: 7339172 ggcggcggcggcgacttcg 7339154 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 accggcggcggcggcgact 99 ||||||||||||||||||| Sbjct: 2663815 accggcggcggcggcgact 2663797
>ref|XM_850533.1| PREDICTED: Canis familiaris short stature homeobox (SHOX), mRNA Length = 876 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggcg 96 |||||||||||||||||||| Sbjct: 51 ggagaccggcggcggcggcg 70
>gb|AY230397.1| Triticum aestivum clone 1Nb-H10 FCA protein (Fca) mRNA, partial cds Length = 2234 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttcg 102 |||||||||||||||||||| Sbjct: 247 cggcggcggcggcgacttcg 266
>gb|AY230385.1| Triticum aestivum clone 1Nb-C11 FCA protein (Fca) mRNA, partial cds Length = 2167 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttcg 102 |||||||||||||||||||| Sbjct: 228 cggcggcggcggcgacttcg 247
>gb|AY230323.1| Triticum aestivum mutant FCA-D1 (Fca) gene, complete cds Length = 10360 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttcg 102 |||||||||||||||||||| Sbjct: 834 cggcggcggcggcgacttcg 853
>ref|XM_806758.1| Trypanosoma cruzi strain CL Brener DnaJ chaperone protein (Tc00.1047053510357.10) partial mRNA Length = 2499 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 agaccggcggcggcggcgac 98 |||||||||||||||||||| Sbjct: 1933 agaccggcggcggcggcgac 1952
>gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 genomic sequence, complete sequence Length = 163108 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 agaccggcggcggcggcgac 98 |||||||||||||||||||| Sbjct: 33224 agaccggcggcggcggcgac 33243
>ref|XM_546222.2| PREDICTED: Canis familiaris hypothetical LOC489106 (LOC489106), mRNA Length = 3238 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cggcggcggcggcgacttcg 102 |||||||||||||||||||| Sbjct: 300 cggcggcggcggcgacttcg 281
>emb|BX324132.10| Zebrafish DNA sequence from clone DKEY-176G4 in linkage group 8, complete sequence Length = 266430 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 ggacgaggtgatggagaccg 84 |||||||||||||||||||| Sbjct: 206679 ggacgaggtgatggagaccg 206660
>emb|CR354582.14| Zebrafish DNA sequence from clone CH211-215B24 in linkage group 8, complete sequence Length = 227074 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ggacgaggtgatggagaccg 84 |||||||||||||||||||| Sbjct: 138593 ggacgaggtgatggagaccg 138612
>gb|AY954461.1|AY954461S1 Canis familiaris short stature homeobox isoform a (SHOX) gene, exon 2 Length = 276 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggcg 96 |||||||||||||||||||| Sbjct: 51 ggagaccggcggcggcggcg 70
>gb|AC012478.18| Homo sapiens chromosome 15 clone RP11-386M24, complete sequence Length = 186540 Score = 40.1 bits (20), Expect = 1.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gaggtgatggagaccggcggcggcggcg 96 ||||||| ||||| |||||||||||||| Sbjct: 162653 gaggtgaaggagagcggcggcggcggcg 162626
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 1.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggcggcga 97 ||||| |||||||||||||||||| Sbjct: 26003990 gatggcgaccggcggcggcggcga 26004013 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ccggcggcggcggcgacttc 101 |||||||||||||||||||| Sbjct: 4879718 ccggcggcggcggcgacttc 4879737 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 16132316 gatggagaccggcggcggc 16132334 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 16132288 gatggagaccggcggcggc 16132306 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 8887123 cggcggcggcggcgacttc 8887105
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 agaccggcggcggcggcgac 98 |||||||||||||||||||| Sbjct: 21638008 agaccggcggcggcggcgac 21638027 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 16462227 gatggagagcggcggcggcggcg 16462205 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 10662814 cggcggcggcggcgacttc 10662832 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 ggcggcggcggcgacttcg 102 ||||||||||||||||||| Sbjct: 7337067 ggcggcggcggcgacttcg 7337049 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 accggcggcggcggcgact 99 ||||||||||||||||||| Sbjct: 2663925 accggcggcggcggcgact 2663907
>gb|AC091544.11| Homo sapiens chromosome 15, clone RP11-386M24, complete sequence Length = 186674 Score = 40.1 bits (20), Expect = 1.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 69 gaggtgatggagaccggcggcggcggcg 96 ||||||| ||||| |||||||||||||| Sbjct: 23876 gaggtgaaggagagcggcggcggcggcg 23903
>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1226_A12 Length = 113025 Score = 40.1 bits (20), Expect = 1.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggcggcga 97 ||||| |||||||||||||||||| Sbjct: 41848 gatggcgaccggcggcggcggcga 41871
>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E04 Length = 170701 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ccggcggcggcggcgacttc 101 |||||||||||||||||||| Sbjct: 67201 ccggcggcggcggcgacttc 67220
>dbj|AK111076.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-E11, full insert sequence Length = 828 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ccggcggcggcggcgacttc 101 |||||||||||||||||||| Sbjct: 392 ccggcggcggcggcgacttc 411
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ggcggcggcggcgacttcgc 103 |||||||||||||||||||| Sbjct: 1290253 ggcggcggcggcgacttcgc 1290272
>emb|V01270.1|RNRRNA Rattus norvegicus genes for 18S, 5.8S, and 28S ribosomal RNAs Length = 8647 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gaccggcggcggcggcgact 99 |||||||||||||||||||| Sbjct: 6925 gaccggcggcggcggcgact 6944
>gb|BC108619.1| Xenopus laevis cDNA clone IMAGE:7210748, partial cds Length = 2072 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 gagaccggcggcggcggcg 96 ||||||||||||||||||| Sbjct: 175 gagaccggcggcggcggcg 157
>ref|XM_549955.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1309 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggcggcg 96 ||||| ||||||||||||||||| Sbjct: 90 gatggtgaccggcggcggcggcg 112
>ref|NM_188549.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1200 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 ggcggcggcggcgacttcg 102 ||||||||||||||||||| Sbjct: 810 ggcggcggcggcgacttcg 828
>ref|XM_467552.1| Oryza sativa (japonica cultivar-group), mRNA Length = 846 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 720 cggcggcggcggcgacttc 702
>ref|NM_190072.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1260 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 accggcggcggcggcgact 99 ||||||||||||||||||| Sbjct: 310 accggcggcggcggcgact 328
>ref|XM_506584.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1165_F02.106 mRNA Length = 1960 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 52 gatggagatcggcggcggcggcg 30
>ref|NM_185508.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1689 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 73 gatggagatcggcggcggcggcg 51
>gb|AC137001.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012L23, complete sequence Length = 121659 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 35179 gatggagaccggcggcggc 35161
>gb|AC165225.5| Mus musculus chromosome 3, clone RP24-70J13, complete sequence Length = 205069 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 38 gaagaaaccacacacactg 56 ||||||||||||||||||| Sbjct: 26820 gaagaaaccacacacactg 26838
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 115739 gatggagagcggcggcggcggcg 115761
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 38.2 bits (19), Expect = 4.6 Identities = 28/31 (90%) Strand = Plus / Minus Query: 66 gacgaggtgatggagaccggcggcggcggcg 96 ||||||||| ||||| |||||||||||||| Sbjct: 59134 gacgaggtggtggagggcggcggcggcggcg 59104
>gb|AC136843.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094M06, complete sequence Length = 135583 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 96246 ggagaccggcggcggcggc 96228
>ref|XM_868411.1| PREDICTED: Bos taurus similar to Ras-related protein Rab-26, transcript variant 2 (LOC515675), mRNA Length = 2915 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 159 cggcggcggcggcgacttc 177
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 ggcggcggcggcgacttcg 102 ||||||||||||||||||| Sbjct: 1679453 ggcggcggcggcgacttcg 1679435
>ref|NM_032122.3| Homo sapiens dystrobrevin binding protein 1 (DTNBP1), transcript variant 1, mRNA Length = 1464 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 152 ggagaccggcggcggcggc 170
>ref|NM_183041.1| Homo sapiens dystrobrevin binding protein 1 (DTNBP1), transcript variant 3, mRNA Length = 1509 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 152 ggagaccggcggcggcggc 170
>ref|NM_183040.1| Homo sapiens dystrobrevin binding protein 1 (DTNBP1), transcript variant 2, mRNA Length = 1949 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 152 ggagaccggcggcggcggc 170
>ref|XM_603618.2| PREDICTED: Bos taurus similar to glutamate receptor, ionotropic, N-methyl-D-aspartate 3A (LOC525269), mRNA Length = 2682 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 accggcggcggcggcgact 99 ||||||||||||||||||| Sbjct: 309 accggcggcggcggcgact 327
>gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1076_H08, complete sequence Length = 148348 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 130014 gatggagaccggcggcggc 129996
>ref|XM_613851.2| PREDICTED: Bos taurus similar to Small conductance calcium-activated potassium channel protein 3 (SK3) (SKCa3), transcript variant 1 (LOC534180), mRNA Length = 2166 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 255 gatggagaacggcggcggcggcg 277
>gb|BC114066.1| Bos taurus RAB26, member RAS oncogene family, mRNA (cDNA clone MGC:137742 IMAGE:8165990), complete cds Length = 1933 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 319 cggcggcggcggcgacttc 337
>gb|AY434816.1| Felis catus microsatellite FCA832 sequence Length = 234 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 gagaagaaaccacacacac 54 ||||||||||||||||||| Sbjct: 104 gagaagaaaccacacacac 122
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 gaccggcggcggcggcgac 98 ||||||||||||||||||| Sbjct: 527784 gaccggcggcggcggcgac 527802
>ref|XM_822316.1| Trypanosoma brucei TREU927 60S ribosomal protein L27a (Tb09.v1.0640) partial mRNA Length = 438 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 ctgatggcgaaggacgagg 72 ||||||||||||||||||| Sbjct: 241 ctgatggcgaaggacgagg 259
>ref|XM_822318.1| Trypanosoma brucei TREU927 60S ribosomal protein L27a (Tb09.211.2650) partial mRNA Length = 438 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 ctgatggcgaaggacgagg 72 ||||||||||||||||||| Sbjct: 241 ctgatggcgaaggacgagg 259
>gb|AC115934.10| Mus musculus chromosome 3, clone RP24-539A2, complete sequence Length = 147659 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 gaagaaaccacacacactg 56 ||||||||||||||||||| Sbjct: 34546 gaagaaaccacacacactg 34528
>gb|AY265460.1| Homo sapiens Hermansky-Pudlak syndrome type 7 protein (DTNBP1) mRNA, complete cds Length = 1348 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 94 ggagaccggcggcggcggc 112
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G21, from chromosome 3, complete sequence Length = 187621 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 81627 cggcggcggcggcgacttc 81645
>emb|AL358074.22| Human DNA sequence from clone RP11-423C15 on chromosome 9 Contains the 5' end of the MAPKAP1 gene for mitogen-activated protein kinase associated protein 1, a novel gene, the 5' end of the PBX3 gene for pre-B-cell leukemia transcription factor 3 and three CpG islands, complete sequence Length = 109081 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 65188 cggcggcggcggcgacttc 65206
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 ccggcggcggcggcgactt 100 ||||||||||||||||||| Sbjct: 123105 ccggcggcggcggcgactt 123123
>emb|AL022343.6|HS608E8 Human DNA sequence from clone RP4-608E8 on chromosome 6p22.1-22.3 Contains the 5' end of the DTNBP1 gene for dystobrevin binding protein 1 and a CpG island, complete sequence Length = 92143 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 24663 ggagaccggcggcggcggc 24681
>ref|XM_971298.1| PREDICTED: Tribolium castaneum hypothetical protein LOC661532 (LOC661532), mRNA Length = 702 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 ggcggcggcggcgacttcg 102 ||||||||||||||||||| Sbjct: 97 ggcggcggcggcgacttcg 115
>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0044I14, from Chromosome 10, complete sequence Length = 63167 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 ccggcggcggcggcgactt 100 ||||||||||||||||||| Sbjct: 53437 ccggcggcggcggcgactt 53419
>gb|AC159208.2| Mus musculus BAC clone RP23-152K15 from chromosome 13, complete sequence Length = 195714 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 39 aagaaaccacacacactga 57 ||||||||||||||||||| Sbjct: 32508 aagaaaccacacacactga 32526
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 gcggcggcggcgacttcgc 103 ||||||||||||||||||| Sbjct: 320785 gcggcggcggcgacttcgc 320803
>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09, complete sequence Length = 96079 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 23589 gatggagaccggcggcggc 23571
>emb|AL606607.3|OSJN00068 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065L13, complete sequence Length = 103039 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 ccggcggcggcggcgactt 100 ||||||||||||||||||| Sbjct: 21582 ccggcggcggcggcgactt 21600
>emb|AJ576039.1|GWE576039 Gordonia westfalica strain DSM44215T plasmid pKB1 complete genome Length = 101016 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 98030 cggcggcggcggcgacttc 98012
>gb|AC100400.10| Mus musculus chromosome 15, clone RP23-134E16, complete sequence Length = 211743 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 agaagaaaccacacacact 55 ||||||||||||||||||| Sbjct: 82340 agaagaaaccacacacact 82358
>emb|AL136637.2|HSM801610 Homo sapiens mRNA; cDNA DKFZp564K192 (from clone DKFZp564K192) Length = 1896 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 87 ggagaccggcggcggcggc 105
>emb|CR623452.1| full-length cDNA clone CS0DC018YM18 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1518 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 170 ggagaccggcggcggcggc 188
>emb|CR603457.1| full-length cDNA clone CS0DI004YB02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1268 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 106 ggagaccggcggcggcggc 124
>emb|CR599171.1| full-length cDNA clone CS0DJ012YB02 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1270 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 106 ggagaccggcggcggcggc 124
>dbj|AK054593.1| Homo sapiens cDNA FLJ30031 fis, clone 3NB692001349 Length = 1379 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 94 ggagaccggcggcggcggc 112
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 ggcggcggcggcgacttcg 102 ||||||||||||||||||| Sbjct: 90428 ggcggcggcggcgacttcg 90410
>ref|XM_937521.1| PREDICTED: Homo sapiens erythrocyte transmembrane protein (LOC51145), mRNA Length = 2312 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 34 cggcggcggcggcgacttc 16
>ref|XM_928870.1| PREDICTED: Homo sapiens erythrocyte transmembrane protein (LOC51145), mRNA Length = 2312 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 34 cggcggcggcggcgacttc 16
>gb|AF394226.1|AF394226 Homo sapiens dysbindin mRNA, complete cds Length = 1349 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 87 ggagaccggcggcggcggc 105
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 accggcggcggcggcgact 99 ||||||||||||||||||| Sbjct: 6279 accggcggcggcggcgact 6297
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 11914015 gatggagaccggcggcggc 11914033 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 11913987 gatggagaccggcggcggc 11914005 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 11913960 gatggagaccggcggcggc 11913978
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 15923648 ggagaccggcggcggcggc 15923630
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 ccggcggcggcggcgactt 100 ||||||||||||||||||| Sbjct: 13276856 ccggcggcggcggcgactt 13276874
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 gagaagaaaccacacacac 54 ||||||||||||||||||| Sbjct: 20690102 gagaagaaaccacacacac 20690120 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 16390647 ggagaccggcggcggcggc 16390629
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 7175165 gatggagaccggcggcggc 7175147
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 30122405 cggcggcggcggcgacttc 30122423 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 23536843 gatggagaacggcggcggcggcg 23536821 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 ccggcggcggcggcgactt 100 ||||||||||||||||||| Sbjct: 10381541 ccggcggcggcggcgactt 10381523
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 accggcggcggcggcgact 99 ||||||||||||||||||| Sbjct: 41135454 accggcggcggcggcgact 41135436 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 38867553 gatggagaccggcggcggc 38867571 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 28224762 gatggagatcggcggcggcggcg 28224740 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 ggcggcggcggcgacttcg 102 ||||||||||||||||||| Sbjct: 6913051 ggcggcggcggcgacttcg 6913033 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggcggcg 96 ||||| ||||||||||||||||| Sbjct: 1182554 gatggtgaccggcggcggcggcg 1182576
>emb|AL606992.3|OSJN00116 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L13, complete sequence Length = 143386 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 46879 cggcggcggcggcgacttc 46861
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 140435 gatggagaccggcggcggc 140453
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 accggcggcggcggcgact 99 ||||||||||||||||||| Sbjct: 32509 accggcggcggcggcgact 32491
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 gaccggcggcggcggcgac 98 ||||||||||||||||||| Sbjct: 1611322 gaccggcggcggcggcgac 1611340
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 accggcggcggcggcgact 99 ||||||||||||||||||| Sbjct: 8734 accggcggcggcggcgact 8716
>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0478H03 Length = 167560 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 59269 gatggagatcggcggcggcggcg 59247
>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445E10 Length = 145912 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 108756 gatggagatcggcggcggcggcg 108734
>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492F05 Length = 159242 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 ggcggcggcggcgacttcg 102 ||||||||||||||||||| Sbjct: 80775 ggcggcggcggcgacttcg 80757
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 ggcggcggcggcgacttcg 102 ||||||||||||||||||| Sbjct: 34869 ggcggcggcggcgacttcg 34851
>dbj|AP004176.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1057_E05 Length = 103229 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 gaccggcggcggcggcgac 98 ||||||||||||||||||| Sbjct: 52442 gaccggcggcggcggcgac 52460
>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1165_F02 Length = 125993 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 11851 gatggagatcggcggcggcggcg 11829
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 gaaggacgaggtgatggag 80 ||||||||||||||||||| Sbjct: 1209147 gaaggacgaggtgatggag 1209165
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0685G12 Length = 149155 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 102002 cggcggcggcggcgacttc 102020
>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528B02 Length = 144495 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 52752 cggcggcggcggcgacttc 52734
>dbj|AP002487.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C01 Length = 78600 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggcggcg 96 ||||| ||||||||||||||||| Sbjct: 36857 gatggtgaccggcggcggcggcg 36879
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 32339 gatggagaccggcggcggc 32357
>dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0040M10 Length = 162790 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 37109 gatggagaccggcggcggc 37127 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 37081 gatggagaccggcggcggc 37099
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1150_E04 Length = 130973 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 106895 gatggagatcggcggcggcggcg 106873
>dbj|AP003843.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1656_E11 Length = 116211 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 ggcggcggcggcgacttcg 102 ||||||||||||||||||| Sbjct: 61137 ggcggcggcggcgacttcg 61155
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 ccggcggcggcggcgactt 100 ||||||||||||||||||| Sbjct: 23963 ccggcggcggcggcgactt 23945
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1791_B03 Length = 166214 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 102526 gatggagaacggcggcggcggcg 102504
>dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0488B06 Length = 154764 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 1303 ggagaccggcggcggcggc 1285
>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0426E02 Length = 166985 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 96499 ggagaccggcggcggcggc 96481
>dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0479C08 Length = 152460 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 gagaagaaaccacacacac 54 ||||||||||||||||||| Sbjct: 62555 gagaagaaaccacacacac 62573
>gb|U96757.1|TBU96757 Trypanosoma brucei brucei ribosomal protein L27a mRNA, complete cds Length = 438 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 ctgatggcgaaggacgagg 72 ||||||||||||||||||| Sbjct: 241 ctgatggcgaaggacgagg 259
>dbj|AK111398.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-D08, full insert sequence Length = 1699 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 201 gatggagaccggcggcggc 183
>dbj|AK106965.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-F10, full insert sequence Length = 1960 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 52 gatggagatcggcggcggcggcg 30
>dbj|AK105806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B07, full insert sequence Length = 1404 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 accggcggcggcggcgact 99 ||||||||||||||||||| Sbjct: 322 accggcggcggcggcgact 340
>dbj|AK102516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095L01, full insert sequence Length = 906 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 640 ggagaccggcggcggcggc 658
>dbj|AK073525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046F01, full insert sequence Length = 1962 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 86 gatggagatcggcggcggcggcg 64
>dbj|AK073405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042N03, full insert sequence Length = 933 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 41 gatggagagcggcggcggcggcg 19
>dbj|AK071475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091F21, full insert sequence Length = 1310 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggcggcg 96 ||||| ||||||||||||||||| Sbjct: 91 gatggtgaccggcggcggcggcg 113
>dbj|AK066563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071G08, full insert sequence Length = 2060 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 ggcggcggcggcgacttcg 102 ||||||||||||||||||| Sbjct: 41 ggcggcggcggcgacttcg 59
>dbj|AK071041.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081F02, full insert sequence Length = 1575 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 397 cggcggcggcggcgacttc 415
>dbj|AK070974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023070F02, full insert sequence Length = 2386 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 accggcggcggcggcgact 99 ||||||||||||||||||| Sbjct: 10 accggcggcggcggcgact 28
>dbj|AK069836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031I12, full insert sequence Length = 1688 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 72 gatggagatcggcggcggcggcg 50
>dbj|AK059914.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-E04, full insert sequence Length = 972 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 72 gatggagagcggcggcggcggcg 50
>dbj|AK058237.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-E02, full insert sequence Length = 536 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 cggcggcggcggcgacttc 101 ||||||||||||||||||| Sbjct: 161 cggcggcggcggcgacttc 143
>gb|AY104209.1| Zea mays PCO062981 mRNA sequence Length = 730 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 gagaccggcggcggcggcg 96 ||||||||||||||||||| Sbjct: 442 gagaccggcggcggcggcg 460
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 ccggcggcggcggcgactt 100 ||||||||||||||||||| Sbjct: 13284196 ccggcggcggcggcgactt 13284214
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 77 ggagaccggcggcggcggc 95 ||||||||||||||||||| Sbjct: 16011024 ggagaccggcggcggcggc 16011006
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 11913686 gatggagaccggcggcggc 11913704 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 11913658 gatggagaccggcggcggc 11913676 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 gatggagaccggcggcggc 92 ||||||||||||||||||| Sbjct: 11913631 gatggagaccggcggcggc 11913649
>gb|AC004707.1|AC004707 Homo sapiens chromosome 17, clone hRPC.117_B_12, complete sequence Length = 123585 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 gcggcggcggcgacttcgc 103 ||||||||||||||||||| Sbjct: 15577 gcggcggcggcgacttcgc 15595
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 gaaggacgaggtgatggag 80 ||||||||||||||||||| Sbjct: 884057 gaaggacgaggtgatggag 884075
>dbj|D83727.1| Oryza sativa (japonica cultivar-group) mRNA for elongation factor 1 beta 2, complete cds Length = 1350 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 50 gatggagagcggcggcggcggcg 28
>dbj|D83726.1| Oryza sativa (japonica cultivar-group) gene for elongation factor 1 beta 2, complete cds Length = 7364 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gatggagaccggcggcggcggcg 96 |||||||| |||||||||||||| Sbjct: 1335 gatggagagcggcggcggcggcg 1313 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,574,873 Number of Sequences: 3902068 Number of extensions: 1574873 Number of successful extensions: 326224 Number of sequences better than 10.0: 145 Number of HSP's better than 10.0 without gapping: 168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 300454 Number of HSP's gapped (non-prelim): 25726 length of query: 103 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 82 effective length of database: 17,151,101,840 effective search space: 1406390350880 effective search space used: 1406390350880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
