ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet133a08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK120752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006E09, full insert sequence Length = 1437 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 121 gaagatgtcgtccctgcggaactcgatcccgcggcgggctcacaaggagcgcgcccagcc 180 ||||||||| || ||||||||| |||||| |||||| ||||||||||||||||||||||| Sbjct: 61 gaagatgtcttcgctgcggaacgcgatccagcggcgcgctcacaaggagcgcgcccagcc 120 Query: 181 ggagtcgcggaagaagtacgggcttctggagaagcacaaggaccatatcgtccgcgccac 240 ||||||| ||||||||| ||||||||||||||||||||||||| | ||||| || || | Sbjct: 121 ggagtcgaggaagaagttcgggcttctggagaagcacaaggactacatcgttcgggcgaa 180 Query: 241 ggcctaccaccgcaaggaggacttcatcaggaacctgaaggagaaggcatcattcaagaa 300 ||| | ||||| |||||||| ||||||||| ||||||||||||||||||| | || Sbjct: 181 ggctttccaccagaaggaggaaaccatcaggaaattgaaggagaaggcatcatttagaaa 240 Query: 301 cccagatgagttctatttcaagatgatcaacagtaaaaccgtggatggaatccataggcc 360 ||| |||||||||||||| |||||||||||||| || || || |||||||| |||||||| Sbjct: 241 ccctgatgagttctattttaagatgatcaacagcaagactgttgatggaattcataggcc 300 Query: 361 caagcctgaagcaaacaa 378 ||||||||||||||||| Sbjct: 301 taagcctgaagcaaacaa 318
>dbj|AK102143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086A13, full insert sequence Length = 1060 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 121 gaagatgtcgtccctgcggaactcgatcccgcggcgggctcacaaggagcgcgcccagcc 180 ||||||||| || ||||||||| |||||| |||||| ||||||||||||||||||||||| Sbjct: 115 gaagatgtcttcgctgcggaacgcgatccagcggcgcgctcacaaggagcgcgcccagcc 174 Query: 181 ggagtcgcggaagaagtacgggcttctggagaagcacaaggaccatatcgtccgcgccac 240 ||||||| ||||||||| ||||||||||||||||||||||||| | ||||| || || | Sbjct: 175 ggagtcgaggaagaagttcgggcttctggagaagcacaaggactacatcgttcgggcgaa 234 Query: 241 ggcctaccaccgcaaggaggacttcatcaggaacctgaaggagaaggcatcattcaagaa 300 ||| | ||||| |||||||| ||||||||| ||||||||||||||||||| | || Sbjct: 235 ggctttccaccagaaggaggaaaccatcaggaaattgaaggagaaggcatcatttagaaa 294 Query: 301 cccagatgagttctatttcaagatgatcaacagtaaaaccgtggatggaatccataggcc 360 ||| |||||||||||||| |||||||||||||| || || || |||||||| |||||||| Sbjct: 295 ccctgatgagttctattttaagatgatcaacagcaagactgttgatggaattcataggcc 354 Query: 361 caagcctgaagcaaacaa 378 ||||||||||||||||| Sbjct: 355 taagcctgaagcaaacaa 372
>ref|NM_191032.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 645 Score = 242 bits (122), Expect = 9e-61 Identities = 221/254 (87%) Strand = Plus / Plus Query: 125 atgtcgtccctgcggaactcgatcccgcggcgggctcacaaggagcgcgcccagccggag 184 ||||| || ||||||||| |||||| |||||| ||||||||||||||||||||||||||| Sbjct: 1 atgtcttcgctgcggaacgcgatccagcggcgcgctcacaaggagcgcgcccagccggag 60 Query: 185 tcgcggaagaagtacgggcttctggagaagcacaaggaccatatcgtccgcgccacggcc 244 ||| ||||||||| ||||||||||||||||||||||||| | ||||| || || | ||| Sbjct: 61 tcgaggaagaagttcgggcttctggagaagcacaaggactacatcgttcgggcgaaggct 120 Query: 245 taccaccgcaaggaggacttcatcaggaacctgaaggagaaggcatcattcaagaaccca 304 | ||||| |||||||| ||||||||| ||||||||||||||||||| | ||||| Sbjct: 121 ttccaccagaaggaggaaaccatcaggaaattgaaggagaaggcatcatttagaaaccct 180 Query: 305 gatgagttctatttcaagatgatcaacagtaaaaccgtggatggaatccataggcccaag 364 |||||||||||||| |||||||||||||| || || || |||||||| |||||||| ||| Sbjct: 181 gatgagttctattttaagatgatcaacagcaagactgttgatggaattcataggcctaag 240 Query: 365 cctgaagcaaacaa 378 |||||||||||||| Sbjct: 241 cctgaagcaaacaa 254
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 89.7 bits (45), Expect = 8e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 276 tgaaggagaaggcatcattcaagaacccagatgagttctatttcaagatgatcaacagta 335 ||||||||||||||||||| | ||||| |||||||||||||| |||||||||||||| | Sbjct: 34404883 tgaaggagaaggcatcatttagaaaccctgatgagttctattttaagatgatcaacagca 34404824 Query: 336 aaaccgtggatggaatccataggcc 360 | || || |||||||| |||||||| Sbjct: 34404823 agactgttgatggaattcataggcc 34404799 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 121 gaagatgtcgtccctgcggaactcgatcccgcggcgggctcacaaggagcgcgcccagcc 180 ||||||||| || ||||||||| |||||| |||||| ||||||||||||||||||||||| Sbjct: 34405676 gaagatgtcttcgctgcggaacgcgatccagcggcgcgctcacaaggagcgcgcccagcc 34405617 Query: 181 g 181 | Sbjct: 34405616 g 34405616 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 181 ggagtcgcggaagaagtacgggcttctggagaagcacaaggac 223 ||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 34405425 ggagtcgaggaagaagttcgggcttctggagaagcacaaggac 34405383
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 89.7 bits (45), Expect = 8e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 276 tgaaggagaaggcatcattcaagaacccagatgagttctatttcaagatgatcaacagta 335 ||||||||||||||||||| | ||||| |||||||||||||| |||||||||||||| | Sbjct: 87227 tgaaggagaaggcatcatttagaaaccctgatgagttctattttaagatgatcaacagca 87168 Query: 336 aaaccgtggatggaatccataggcc 360 | || || |||||||| |||||||| Sbjct: 87167 agactgttgatggaattcataggcc 87143 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 121 gaagatgtcgtccctgcggaactcgatcccgcggcgggctcacaaggagcgcgcccagcc 180 ||||||||| || ||||||||| |||||| |||||| ||||||||||||||||||||||| Sbjct: 88020 gaagatgtcttcgctgcggaacgcgatccagcggcgcgctcacaaggagcgcgcccagcc 87961 Query: 181 g 181 | Sbjct: 87960 g 87960 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 181 ggagtcgcggaagaagtacgggcttctggagaagcacaaggac 223 ||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 87769 ggagtcgaggaagaagttcgggcttctggagaagcacaaggac 87727
>gb|AC093453.40| Canis familiaris strain Doberman Pinscher clone rp81-252i15, complete sequence Length = 140024 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 19 cctcccatctcccatcccctctcctctcct 48 ||||||||||||| |||||||||||||||| Sbjct: 7068 cctcccatctcccctcccctctcctctcct 7097
>gb|AC102630.6| Mus musculus chromosome 1, clone RP23-473M13, complete sequence Length = 196529 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 5 cccttctcttccggcctcccatct 28 |||||||||||||||||||||||| Sbjct: 104895 cccttctcttccggcctcccatct 104872
>gb|AC155841.6| Mus musculus 6 BAC RP24-490O5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 141583 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 19 cctcccatctcccatcccctctcctctcctc 49 |||||| |||||| ||||||||||||||||| Sbjct: 128776 cctcccctctcccctcccctctcctctcctc 128806
>gb|AC153842.9| Mus musculus 6 BAC RP23-348K12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174100 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 19 cctcccatctcccatcccctctcctctcctc 49 |||||| |||||| ||||||||||||||||| Sbjct: 84227 cctcccctctcccctcccctctcctctcctc 84257
>emb|AL935058.12| Mouse DNA sequence from clone RP23-409M4 on chromosome 2, complete sequence Length = 143502 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 19 cctcccatctcccatcccctctcctctcctc 49 |||||| |||||| ||||||||||||||||| Sbjct: 118868 cctcccctctcccctcccctctcctctcctc 118898
>emb|AL928572.5| Mouse DNA sequence from clone RP23-333P17 on chromosome 2, complete sequence Length = 154074 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 19 cctcccatctcccatcccctctcctctcctc 49 |||||| |||||| ||||||||||||||||| Sbjct: 113296 cctcccctctcccctcccctctcctctcctc 113266
>gb|AC166828.3| Mus musculus BAC clone RP23-332O23 from chromosome 14, complete sequence Length = 216845 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 catctcccatcccctctcctct 45 |||||||||||||||||||||| Sbjct: 128931 catctcccatcccctctcctct 128952
>ref|XM_417753.1| PREDICTED: Gallus gallus similar to CGI-94 protein; comparative gene identification transcript 94 (LOC419606), mRNA Length = 1032 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 295 caagaacccagatgagttctatttcaagatgatc 328 ||||||||| ||||||||||| ||||| |||||| Sbjct: 253 caagaaccctgatgagttctacttcaaaatgatc 286
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 catctcccatcccctctcctctcctc 49 |||||||| ||||||||||||||||| Sbjct: 32295022 catctcccctcccctctcctctcctc 32295047 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 cctctcctctcctcgccgcg 55 |||||||||||||||||||| Sbjct: 31774750 cctctcctctcctcgccgcg 31774769
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 catctcccatcccctctcctctcctc 49 |||||||| ||||||||||||||||| Sbjct: 28789 catctcccctcccctctcctctcctc 28814
>emb|AL135839.15| Human DNA sequence from clone RP1-188K17 on chromosome 6q22.22-23.3 Contains the part of the SGK gene for serum/glucocorticoid regulated kinase and a CpG island, complete sequence Length = 113673 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 19 cctcccatctcccatcccctctcctctcct 48 |||||| |||||| |||||||||||||||| Sbjct: 46586 cctcccttctcccctcccctctcctctcct 46557
>emb|AL117329.8|HSBA191L9 Human DNA sequence from clone RP11-191L9 on chromosome 22, complete sequence Length = 146438 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tcccatctcccatcccctctcc 42 |||||||||||||||||||||| Sbjct: 82958 tcccatctcccatcccctctcc 82979
>gb|AC078999.4| Homo sapiens chromosome 18, clone RP11-104G8, complete sequence Length = 156593 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 306 atgagttctatttcaagatgat 327 |||||||||||||||||||||| Sbjct: 98176 atgagttctatttcaagatgat 98155
>gb|AC090660.3| Homo sapiens chromosome 18, clone RP11-869O1, complete sequence Length = 195156 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 306 atgagttctatttcaagatgat 327 |||||||||||||||||||||| Sbjct: 4816 atgagttctatttcaagatgat 4837
>gb|AC158535.2| Mus musculus BAC clone RP23-28J6 from chromosome 13, complete sequence Length = 216469 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 catctcccatcccctctcctctcctc 49 |||||||| ||||||||||||||||| Sbjct: 81023 catctcccctcccctctcctctcctc 81048
>gb|AC000046.6| Homo sapiens Chromosome 22q13 Cosmid Clone p91c10, complete sequence Length = 38200 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tcccatctcccatcccctctcc 42 |||||||||||||||||||||| Sbjct: 21722 tcccatctcccatcccctctcc 21743
>emb|BX930871.2| Gallus gallus finished cDNA, clone ChEST969j14 Length = 1018 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 295 caagaacccagatgagttctatttcaagatgatc 328 ||||||||| ||||||||||| ||||| |||||| Sbjct: 247 caagaaccctgatgagttctacttcaaaatgatc 280
>gb|AC011143.6|AC011143 Homo sapiens chromosome 18, clone RP11-1O15, complete sequence Length = 136492 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 306 atgagttctatttcaagatgat 327 |||||||||||||||||||||| Sbjct: 14845 atgagttctatttcaagatgat 14866
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 catctcccatcccctctcctctcctc 49 |||||||| ||||||||||||||||| Sbjct: 32385532 catctcccctcccctctcctctcctc 32385557 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 cctctcctctcctcgccgcg 55 |||||||||||||||||||| Sbjct: 31865266 cctctcctctcctcgccgcg 31865285
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 tcccctctcctctcctcgccgc 54 |||||||||||||||||||||| Sbjct: 34315167 tcccctctcctctcctcgccgc 34315146 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 20 ctcccatctcccatcccctctcctctcctc 49 ||||||| |||||||| ||||||||||||| Sbjct: 16450017 ctcccatgtcccatccactctcctctcctc 16449988 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 22 cccatctcccatcccctctcctctcctc 49 |||| |||||||| |||||||||||||| Sbjct: 33016210 cccacctcccatctcctctcctctcctc 33016183 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ccatcccctctcctctcctc 49 |||||||||||||||||||| Sbjct: 31922518 ccatcccctctcctctcctc 31922499
>emb|BX935563.1| Gallus gallus finished cDNA, clone ChEST82k5 Length = 1034 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 295 caagaacccagatgagttctatttcaagatgatc 328 ||||||||| ||||||||||| ||||| |||||| Sbjct: 253 caagaaccctgatgagttctacttcaaaatgatc 286
>dbj|AP004870.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419C03 Length = 146929 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 20 ctcccatctcccatcccctctcctctcctc 49 ||||||| |||||||| ||||||||||||| Sbjct: 135683 ctcccatgtcccatccactctcctctcctc 135654
>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1548_F12 Length = 118814 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 tcccctctcctctcctcgccgc 54 |||||||||||||||||||||| Sbjct: 12814 tcccctctcctctcctcgccgc 12793
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 tcccctctcctctcctcgccgc 54 |||||||||||||||||||||| Sbjct: 150440 tcccctctcctctcctcgccgc 150419
>dbj|AP005316.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0527E02 Length = 176826 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 20 ctcccatctcccatcccctctcctctcctc 49 ||||||| |||||||| ||||||||||||| Sbjct: 23432 ctcccatgtcccatccactctcctctcctc 23403
>gb|AC102224.21| Mus musculus chromosome 3, clone RP24-372D1, complete sequence Length = 196936 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 443 gtccaaagtgaaagaaagaaag 464 |||||||||||||||||||||| Sbjct: 40360 gtccaaagtgaaagaaagaaag 40381
>dbj|AK102531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096E13, full insert sequence Length = 2237 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 20 ctcccatctcccatcccctctcctctcctc 49 ||||||| |||||||| ||||||||||||| Sbjct: 30 ctcccatgtcccatccactctcctctcctc 59
>dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L08, full insert sequence Length = 3325 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 24 catctcccatcccctctcctctcctc 49 |||||||| ||||||||||||||||| Sbjct: 85 catctcccctcccctctcctctcctc 60
>dbj|AK067584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112C12, full insert sequence Length = 1258 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 tcccctctcctctcctcgccgc 54 |||||||||||||||||||||| Sbjct: 59 tcccctctcctctcctcgccgc 38
>gb|AC164099.3| Mus musculus BAC clone RP23-10H9 from chromosome 14, complete sequence Length = 221612 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 catctcccatcccctctcctct 45 |||||||||||||||||||||| Sbjct: 4896 catctcccatcccctctcctct 4917
>gb|DQ214688.1| Taeniopygia guttata clone 0058P0059E11 U3 snoRNA-associated protein 11 variant 2-like mRNA, complete sequence Length = 1019 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 295 caagaacccagatgagttctatttcaagatgat 327 ||||||||| ||||||||||| ||||| ||||| Sbjct: 223 caagaaccctgatgagttctacttcaaaatgat 255
>gb|DQ214687.1| Taeniopygia guttata clone 0058P0017G01 U3 snoRNA-associated protein 11 variant 2-like mRNA, complete sequence Length = 1022 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 295 caagaacccagatgagttctatttcaagatgat 327 ||||||||| ||||||||||| ||||| ||||| Sbjct: 223 caagaaccccgatgagttctacttcaaaatgat 255
>gb|DQ214686.1| Taeniopygia guttata clone 0058P0047F02 U3 snoRNA-associated protein 11 variant 2-like mRNA, complete sequence Length = 1021 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 295 caagaacccagatgagttctatttcaagatgat 327 ||||||||| ||||||||||| ||||| ||||| Sbjct: 221 caagaaccctgatgagttctacttcaaaatgat 253
>gb|DQ214685.1| Taeniopygia guttata clone 0058P0002D06 U3 snoRNA-associated protein 11 variant 2-like mRNA, complete sequence Length = 1019 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 295 caagaacccagatgagttctatttcaagatgat 327 ||||||||| ||||||||||| ||||| ||||| Sbjct: 223 caagaaccctgatgagttctacttcaaaatgat 255
>gb|DQ214684.1| Taeniopygia guttata clone 0058P0059E09 U3 snoRNA-associated protein 11 variant 2-like mRNA, complete sequence Length = 1019 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 295 caagaacccagatgagttctatttcaagatgat 327 ||||||||| ||||||||||| ||||| ||||| Sbjct: 223 caagaaccctgatgagttctacttcaaaatgat 255
>gb|DQ214683.1| Taeniopygia guttata clone 0061P0021F09 U3 snoRNA-associated protein 11 variant 2-like mRNA, complete sequence Length = 1033 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 295 caagaacccagatgagttctatttcaagatgat 327 ||||||||| ||||||||||| ||||| ||||| Sbjct: 234 caagaaccccgatgagttctacttcaaaatgat 266
>gb|DQ214682.1| Taeniopygia guttata clone 0061P0007B12 U3 snoRNA-associated protein 11 variant 2-like mRNA, complete sequence Length = 1012 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 295 caagaacccagatgagttctatttcaagatgat 327 ||||||||| ||||||||||| ||||| ||||| Sbjct: 211 caagaaccccgatgagttctacttcaaaatgat 243
>gb|AC145615.3| Homo sapiens BAC clone RP11-1217H2 from UL, complete sequence Length = 207889 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 20 ctcccatctcccatcccctctcctctcct 48 ||||| |||||| |||||||||||||||| Sbjct: 34107 ctcccctctcccctcccctctcctctcct 34135
>gb|DQ366149.1| Murine leukemia virus isolate NeRV, complete genome Length = 8273 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4082 gctccttcttccgggagaggg 4062
>gb|DQ366148.1| Mus musculus isolate MelARV endogenous B-tropic ecotropic murine leukemia virus, complete genome Length = 8274 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4083 gctccttcttccgggagaggg 4063
>gb|DQ366147.1| Mus musculus endogenous ecotropic murine leukemia virus 1, complete genome Length = 8275 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4084 gctccttcttccgggagaggg 4064
>gb|AC142448.3| Mus musculus BAC clone RP24-540M5 from chromosome 18, complete sequence Length = 170302 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ctcccatcccctctcctctcc 47 ||||||||||||||||||||| Sbjct: 89500 ctcccatcccctctcctctcc 89480 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 89402 tctcccctcccctctcctctcctc 89379
>gb|AY252102.1| Murine leukemia virus strain BM5eco, complete genome Length = 8281 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4082 gctccttcttccgggagaggg 4062
>gb|AC142384.2| Homo sapiens chromosome 16 clone RP11-293B20, complete sequence Length = 182907 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 20 ctcccatctcccatcccctctcctctcct 48 ||||| |||||| |||||||||||||||| Sbjct: 101129 ctcccctctcccctcccctctcctctcct 101101
>gb|AC127536.5| Homo sapiens chromosome 15, clone RP11-1181H2, complete sequence Length = 168996 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 20 ctcccatctcccatcccctctcctctcct 48 ||||| |||||| |||||||||||||||| Sbjct: 132405 ctcccctctcccctcccctctcctctcct 132377
>gb|AC124407.4| Mus musculus BAC clone RP24-389C22 from chromosome 10, complete sequence Length = 157929 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 acatctttcaggctgtccaaa 449 ||||||||||||||||||||| Sbjct: 30201 acatctttcaggctgtccaaa 30221
>gb|AC122266.2| Mus musculus BAC clone RP23-213K18 from 8, complete sequence Length = 195246 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 148971 gctccttcttccgggagaggg 148991
>gb|AC158362.5| Mus musculus BAC clone RP23-214K5 from chromosome 8, complete sequence Length = 201185 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 101138 gctccttcttccgggagaggg 101118
>emb|AL356502.21| Human DNA sequence from clone RP11-430I3 on chromosome 13 Contains the 5' end of the DIAPH3 gene for diaphanous homolog 3 (Drosophila), a novel gene and a CpG island, complete sequence Length = 63441 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 aaggagaaggcatcattcaag 298 ||||||||||||||||||||| Sbjct: 12957 aaggagaaggcatcattcaag 12977
>gb|AC109352.3| Homo sapiens BAC clone RP11-489P20 from 4, complete sequence Length = 157443 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 tctcttccggcctcccatctcccat 33 |||||||| |||||||||||||||| Sbjct: 50653 tctcttcctgcctcccatctcccat 50629
>gb|AC092342.3| Homo sapiens chromosome 16 clone RP11-264M14, complete sequence Length = 170324 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 20 ctcccatctcccatcccctctcctctcct 48 ||||| |||||| |||||||||||||||| Sbjct: 30830 ctcccctctcccctcccctctcctctcct 30858
>gb|AF169256.1|AF169256 Murine leukemia virus SL3-3, complete genome Length = 8377 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4086 gctccttcttccgggagaggg 4066
>dbj|AK090128.1| Mus musculus colon RCB-0549 Cle-H3 cDNA, RIKEN full-length enriched library, clone:G431002I12 product:Murine Leukemia virus gag gene, reverse transcriptase (pol) gene and envelope glycoprotein (env) gene, complete cds, full insert sequence Length = 8284 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4089 gctccttcttccgggagaggg 4069
>dbj|AK090127.1| Mus musculus brain CRL-1443 BC3H1 cDNA, RIKEN full-length enriched library, clone:G431002F22 product:Murine Leukemia virus gag gene, reverse transcriptase (pol) gene and envelope glycoprotein (env) gene, complete cds, full insert sequence Length = 8268 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4074 gctccttcttccgggagaggg 4054
>dbj|AK090126.1| Mus musculus brain CRL-1443 BC3H1 cDNA, RIKEN full-length enriched library, clone:G431002E14 product:melanoma antigen, full insert sequence Length = 8283 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4088 gctccttcttccgggagaggg 4068
>dbj|AK090125.1| Mus musculus brain CRL-1443 BC3H1 cDNA, RIKEN full-length enriched library, clone:G431002D05 product:melanoma antigen, full insert sequence Length = 12349 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 7152 gctccttcttccgggagaggg 7132
>dbj|AK090120.1| Mus musculus CRL-1751 WEHI 164 cDNA, RIKEN full-length enriched library, clone:G431001F01 product:Murine Leukemia virus gag gene, reverse transcriptase (pol) gene and envelope glycoprotein (env) gene, complete cds, full insert sequence Length = 8175 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4086 gctccttcttccgggagaggg 4066
>gb|U43202.1|MLU43202 RFP provirus of Murine leukemia virus gag precursor protein, pol precursor protein, env precursor protein genes, complete cds Length = 8892 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4545 gctccttcttccgggagaggg 4525
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 tcccctctcctctcctcgccg 53 ||||||||||||||||||||| Sbjct: 27841750 tcccctctcctctcctcgccg 27841730
>gb|AC139476.3| Homo sapiens chromosome 16 clone RP11-341P6, complete sequence Length = 189057 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 20 ctcccatctcccatcccctctcctctcct 48 ||||| |||||| |||||||||||||||| Sbjct: 129342 ctcccctctcccctcccctctcctctcct 129370
>gb|AC018665.9| Homo sapiens chromosome 17, clone RP11-449J21, complete sequence Length = 184393 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 tccaaagtgaaagaaagaaag 464 ||||||||||||||||||||| Sbjct: 59600 tccaaagtgaaagaaagaaag 59580
>dbj|AB213653.1| Murine leukemia virus gag, env genes for gag polyprotein, env polyprotein, complete cds, clone: BXH2_K043 Length = 8728 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4463 gctccttcttccgggagaggg 4443
>dbj|AB213652.1| Murine leukemia virus gag, env genes for gag polyprotein, env polyprotein, complete cds, clone: BXH2_S027 Length = 8728 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4463 gctccttcttccgggagaggg 4443
>gb|AC015801.25|AC015801 Homo sapiens chromosome 17, clone RP11-854A13, complete sequence Length = 185351 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 tccaaagtgaaagaaagaaag 464 ||||||||||||||||||||| Sbjct: 177183 tccaaagtgaaagaaagaaag 177163
>gb|AC151828.3| Mus musculus BAC clone RP24-444L19 from chromosome 10, complete sequence Length = 222344 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 acatctttcaggctgtccaaa 449 ||||||||||||||||||||| Sbjct: 121440 acatctttcaggctgtccaaa 121460
>gb|AC008266.3|AC008266 Homo sapiens PAC clone RP5-1145A24 from 7p11.2-p21, complete sequence Length = 177675 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 19 cctcccatctcccatcccctctcctctcc 47 |||||| |||||| ||||||||||||||| Sbjct: 101769 cctcccctctcccctcccctctcctctcc 101741
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 aagcctgaagcaaacaataag 382 ||||||||||||||||||||| Sbjct: 733573 aagcctgaagcaaacaataag 733593
>gb|AC136877.2| Homo sapiens chromosome 16 clone RP11-1258I11, complete sequence Length = 180454 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 20 ctcccatctcccatcccctctcctctcct 48 ||||| |||||| |||||||||||||||| Sbjct: 39043 ctcccctctcccctcccctctcctctcct 39071
>gb|AC006960.1|AC006960 Homo sapiens clone RP11-182J23 from 7p14-15, complete sequence Length = 179757 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 19 cctcccatctcccatcccctctcctctcc 47 ||||||||||||| |||||||||| |||| Sbjct: 39769 cctcccatctcccgtcccctctcccctcc 39741 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 19 cctcccatctcccatcccctctcctctcc 47 |||||| |||||| ||||||||||||||| Sbjct: 39733 cctcccctctcccctcccctctcctctcc 39705
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 tcccctctcctctcctcgccg 53 ||||||||||||||||||||| Sbjct: 49828 tcccctctcctctcctcgccg 49808
>dbj|AB100876.1| Mus musculus Notch1 gene, insertion of murine leukemia virus, cell_line:TL10 Length = 6002 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 1630 gctccttcttccgggagaggg 1610
>gb|AF136491.1|AF136491 Murine leukemia virus erv1 polymerase gene, partial cds Length = 3539 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 1832 gctccttcttccgggagaggg 1812
>gb|AF034783.1|AF034783 Synthetic helper virus genomic sequence fragment Length = 2761 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 952 gctccttcttccgggagaggg 932
>gb|AF034782.1|AF034782 Synthetic helper virus genomic sequence fragment Length = 5798 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4073 gctccttcttccgggagaggg 4053
>dbj|D82019.1|MUSBA Mus musculus Bsg gene for basigin, complete cds, exons 1-7 Length = 11763 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 acatctttcaggctgtccaaa 449 ||||||||||||||||||||| Sbjct: 11168 acatctttcaggctgtccaaa 11188
>gb|J01998.1|MLOCG AKV murine leukemia virus, complete proviral genome Length = 8374 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4084 gctccttcttccgggagaggg 4064
>gb|U13766.1|MLU13766 Murine leukemia virus MCF1233, complete genome Length = 8196 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4080 gctccttcttccgggagaggg 4060
>gb|AC152981.2| Mus musculus 10 BAC RP23-154M15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 200104 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 20 ctcccatctcccatcccctctcctctcct 48 ||||| |||||| |||||||||||||||| Sbjct: 148133 ctcccttctcccctcccctctcctctcct 148161
>gb|M87550.1|MLVPOGAEN Murine Leukemia virus gag gene, reverse transcriptase (pol) gene and envelope glycoprotein (env) gene, complete cds Length = 8259 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 4083 gctccttcttccgggagaggg 4063
>emb|AL590430.8| Mouse DNA sequence from clone RP23-384K10 on chromosome 2, complete sequence Length = 144909 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 19 cctcccatctcccatcccctctcctctcc 47 |||||| |||||| ||||||||||||||| Sbjct: 50330 cctcccctctcccctcccctctcctctcc 50302 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 19 cctcccatctcccatcccctctcctctcc 47 |||||| |||||| ||||||||||||||| Sbjct: 50296 cctcccctctcccctcccctctcctctcc 50268
>gb|K02027.1|MLVPOL Murine leukemia virus pol gene, partial coding sequence Length = 374 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 360 gctccttcttccgggagaggg 340
>gb|M19005.1|MUSMULVEA Mouse (strain C3H) endogenous C3H/He murine leukemia proviral pol and env region DNA, partial cds Length = 4630 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gctccttcttccgggagaggg 109 ||||||||||||||||||||| Sbjct: 365 gctccttcttccgggagaggg 345
>gb|AC110244.10| Mus musculus chromosome 5, clone RP23-247E10, complete sequence Length = 214638 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 123101 tctcccctcccctctcctctcctc 123078
>gb|AC121832.3| Mus musculus chromosome 10 clone RP24-67D23, complete sequence Length = 172348 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 64445 tctcccctcccctctcctctcctc 64468
>gb|AC163640.5| Mus musculus BAC clone RP24-182L3 from chromosome 16, complete sequence Length = 168350 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 23812 tctcccctcccctctcctctcctc 23835
>ref|XM_468094.1| Oryza sativa (japonica cultivar-group), mRNA Length = 381 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 22 cccatctcccatcccctctcctctcctc 49 |||| |||||||| |||||||||||||| Sbjct: 353 cccacctcccatctcctctcctctcctc 326
>gb|AC163325.7| Mus musculus chromosome 1, clone RP23-76L21, complete sequence Length = 253153 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 33880 tctcccctcccctctcctctcctc 33857
>gb|AC105980.13| Mus musculus chromosome 3, clone RP24-234E11, complete sequence Length = 171161 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 148850 tctcccctcccctctcctctcctc 148827
>gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome 8, complete sequence Length = 216443 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 67738 tctcccctcccctctcctctcctc 67761
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 ctcccatcccctctcctctcctcg 50 ||||| |||||||||||||||||| Sbjct: 40494 ctcccctcccctctcctctcctcg 40517
>gb|AC137615.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0053F13, from chromosome 5, complete sequence Length = 149538 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ccctctcctctcctcgccgc 54 |||||||||||||||||||| Sbjct: 68973 ccctctcctctcctcgccgc 68954
>gb|AC141873.4| Mus musculus BAC clone RP24-332J21 from chromosome Y, complete sequence Length = 160015 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 150444 tctcccctcccctctcctctcctc 150421
>gb|AC129576.11| Mus musculus chromosome 10, clone RP24-343D9, complete sequence Length = 136276 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 50995 tctcccctcccctctcctctcctc 51018
>gb|BT014009.1| Lycopersicon esculentum clone 133066F, mRNA sequence Length = 1625 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 ccagatgagttctatttcaagatg 325 |||||||||||||| ||||||||| Sbjct: 758 ccagatgagttctacttcaagatg 781
>gb|AC163285.3| Mus musculus BAC clone RP23-379H2 from chromosome 16, complete sequence Length = 184951 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 106925 tctcccctcccctctcctctcctc 106948
>gb|AC132601.4| Mus musculus BAC clone RP24-165F4 from chromosome Y, complete sequence Length = 186363 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 182770 tctcccctcccctctcctctcctc 182793 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 151122 tctcccctcccctctcctctcctc 151145
>emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome Length = 1395502 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 aggaacctgaaggagaaggcatca 292 |||||||||||| ||||||||||| Sbjct: 441908 aggaacctgaagaagaaggcatca 441885
>gb|AC121858.3| Mus musculus BAC clone RP24-104B23 from chromosome 8, complete sequence Length = 177226 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 87281 tctcccttcccctctcctctcctc 87304
>gb|AC109233.10| Mus musculus chromosome 16, clone RP23-219N5, complete sequence Length = 271253 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 180754 tctcccctcccctctcctctcctc 180777
>gb|AC083890.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-284P20, complete sequence Length = 203967 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 131125 tctcccctcccctctcctctcctc 131102
>gb|DQ485452.1| Homo sapiens protein kinase D1 (PRKD1) gene, complete cds Length = 355200 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 tgggatacatctttcaggct 442 |||||||||||||||||||| Sbjct: 221786 tgggatacatctttcaggct 221767
>gb|DQ011322.1| Ornithorhynchus anatinus isolate 112 T cell receptor gamma chain gene, partial cds Length = 461 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 gggagaggggcagcgaggacgaag 124 |||||||||||||| ||||||||| Sbjct: 94 gggagaggggcagcaaggacgaag 71
>emb|AL512292.5| Human DNA sequence from clone RP11-292O17 on chromosome 1 Contains a ribosomal protein L31 (RPL31) pseudogene, complete sequence Length = 135389 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 88683 tctcccctcccctctcctctcctc 88660
>emb|AL157369.7| Human DNA sequence from clone RP11-528D24 on chromosome 13 Contains the SUCLA2 gene for succinate-CoA ligase, ADP-forming, beta subunit (A-BETA), a novel gene and a CpG island, complete sequence Length = 83827 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cccatctcccatcccctctcctct 45 ||||| |||||||||||||||||| Sbjct: 23334 cccatatcccatcccctctcctct 23357
>emb|AL109942.13|HSJ473J16 Human DNA sequence from clone RP3-473J16 on chromosome 6q25.3-26 Contains 3' end of the MAP3K4 gene for mitogen-activated protein kinase kinase kinase 4 (MTK1, MEKK4, MAPKKK4, KIAA0213, homolog of yeast SSK2/SSK22 MAP kinase kinase kinase), the gene for lysophosphatidic acid acyltransferase-delta (LPAAT-delta) (FLJ23628, contains mRNA DKFZp434M038) and the gene for hypothetical protein FLJ23112 (DKFZP566E2324), complete sequence Length = 176217 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 ||||||||| |||||||||||||| Sbjct: 74227 tctcccatctcctctcctctcctc 74204
>gb|AC158961.3| Mus musculus chromosome 1, clone RP23-316E20, complete sequence Length = 202205 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 89020 tctcccctcccctctcctctcctc 88997
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 cctctcctctcctcgccgcg 55 |||||||||||||||||||| Sbjct: 99976 cctctcctctcctcgccgcg 99995
>gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosome 10, complete sequence Length = 205283 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 154825 tctcccctcccctctcctctcctc 154848
>emb|AL662858.15| Mouse DNA sequence from clone RP23-166O21 on chromosome 11, complete sequence Length = 195612 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 cctcccatctcccatcccctctcctctc 46 |||||| |||||| |||||||||||||| Sbjct: 75671 cctcccctctcccctcccctctcctctc 75644
>gb|AC133198.3| Mus musculus BAC clone RP23-251I6 from chromosome 17, complete sequence Length = 182898 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 ctcccatcccctctcctctcctcg 50 |||||||||||||||||| ||||| Sbjct: 127515 ctcccatcccctctcctcccctcg 127538
>gb|AC163691.4| Mus musculus BAC clone RP24-1D8 from chromosome y, complete sequence Length = 165543 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 51564 tctcccctcccctctcctctcctc 51587
>dbj|AP005827.1| Mus musculus genomic DNA, chromosome 16 clone:RP21-668B6, complete sequence Length = 214865 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 cctcccatctcccatcccctctcctctc 46 |||||| |||||| |||||||||||||| Sbjct: 207757 cctcccctctcccctcccctctcctctc 207730
>gb|AC119156.9| Mus musculus chromosome 1, clone RP24-534J20, complete sequence Length = 185873 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 69914 tctcccctcccctctcctctcctc 69891
>gb|AC013644.7| Homo sapiens chromosome 8, clone RP11-17A4, complete sequence Length = 168477 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ctcccatcccctctcctctc 46 |||||||||||||||||||| Sbjct: 101335 ctcccatcccctctcctctc 101354
>gb|AC104306.2| Homo sapiens chromosome 3 clone RP11-524O15, complete sequence Length = 197110 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 27 ctcccatcccctctcctctcctcgccgc 54 ||||| ||||||||||||||||| |||| Sbjct: 41746 ctcccctcccctctcctctcctccccgc 41719
>gb|AC015463.7| Homo sapiens, clone RP11-114I9, complete sequence Length = 40870 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 tcattcaagaacccagatga 309 |||||||||||||||||||| Sbjct: 16137 tcattcaagaacccagatga 16156
>gb|AC158985.2| Mus musculus BAC clone RP23-277H13 from chromosome 16, complete sequence Length = 174321 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 29617 tctcccctcccctctcctctcctc 29594
>gb|AC154450.3| Mus musculus BAC clone RP24-169J2 from chromosome 12, complete sequence Length = 168477 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 56251 tctcccctcccctctcctctcctc 56228
>gb|AC160246.2| Mus musculus BAC clone RP24-465F1 from chromosome 9, complete sequence Length = 157105 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ccatcccctctcctctcctc 49 |||||||||||||||||||| Sbjct: 98606 ccatcccctctcctctcctc 98587
>gb|AC011966.7|AC011966 Homo sapiens chromosome 15, clone RP11-285I14, complete sequence Length = 167862 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 tcattcaagaacccagatga 309 |||||||||||||||||||| Sbjct: 4408 tcattcaagaacccagatga 4389
>gb|AC090527.3|AC090527 Homo sapiens chromosome 15 clone RP11-96O20 map 15q21.1, complete sequence Length = 173585 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||||||||||| ||||||||| Sbjct: 146868 tctcccatcccctcccctctcctc 146891 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||||||||||| ||||||||| Sbjct: 146839 tctcccatcccctcccctctcctc 146862
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ctgcggaactcgatcccgcg 153 |||||||||||||||||||| Sbjct: 17516629 ctgcggaactcgatcccgcg 17516610
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 ctcccatcccctctcctctcctcg 50 ||||| |||||||||||||||||| Sbjct: 19321943 ctcccctcccctctcctctcctcg 19321966
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cccatcccctctcctctcct 48 |||||||||||||||||||| Sbjct: 15777638 cccatcccctctcctctcct 15777657
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 13129587 tctcccctcccctctcctctcctc 13129564
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ccctctcctctcctcgccgc 54 |||||||||||||||||||| Sbjct: 10168879 ccctctcctctcctcgccgc 10168860
>gb|AC073393.2|AC073393 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0076M18, complete sequence Length = 132647 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cccatcccctctcctctcct 48 |||||||||||||||||||| Sbjct: 72598 cccatcccctctcctctcct 72617
>gb|AC009725.12|AC009725 Mus musculus chromosome , clone CT7-388N17, complete sequence Length = 145152 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 cctcccatctcccatcccctctcctctc 46 |||||| |||||| |||||||||||||| Sbjct: 57661 cctcccctctcccctcccctctcctctc 57634
>gb|AC099699.16| Mus musculus chromosome 7, clone RP23-32A8, complete sequence Length = 195263 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 107412 tctcccctcccctctcctctcctc 107389
>gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosome 15, complete sequence Length = 194306 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 168080 tctcccctcccctctcctctcctc 168103
>gb|AC011471.6|AC011471 Homo sapiens chromosome 19 clone CTC-503J8, complete sequence Length = 154702 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 22 cccatctcccatcccctctcctctcctc 49 |||||||||| || |||||||||||||| Sbjct: 31968 cccatctcccttctcctctcctctcctc 31995
>gb|AC010209.14| Homo sapiens 12 BAC RP11-427C3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191148 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 157883 tctcccctcccctctcctctcctc 157906
>gb|AC022655.8| Homo sapiens, clone RP11-28O3, complete sequence Length = 142630 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 109114 tctcccctcccctctcctctcctc 109091
>gb|AC020763.6| Homo sapiens chromosome 16 clone RP11-394B2, complete sequence Length = 200838 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 143152 tctcccctcccctctcctctcctc 143129
>gb|AC116764.10| Mus musculus chromosome 15, clone RP23-388P12, complete sequence Length = 217156 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 74704 tctcccctcccctctcctctcctc 74681
>dbj|AP005168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066B06 Length = 154025 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 47914 tctcccctcccctctcctctcctc 47891
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 22 cccatctcccatcccctctcctctcctc 49 |||| |||||||| |||||||||||||| Sbjct: 62150 cccacctcccatctcctctcctctcctc 62123
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ccatcccctctcctctcctc 49 |||||||||||||||||||| Sbjct: 83519 ccatcccctctcctctcctc 83500
>emb|BX511013.9| Zebrafish DNA sequence from clone DKEY-221I2 in linkage group 20, complete sequence Length = 161346 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tgtccaaagtgaaagaaaga 461 |||||||||||||||||||| Sbjct: 47943 tgtccaaagtgaaagaaaga 47962
>dbj|AK101739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061L02, full insert sequence Length = 1422 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ccctctcctctcctcgccgc 54 |||||||||||||||||||| Sbjct: 68 ccctctcctctcctcgccgc 87
>gb|AC006017.2|AC006017 Homo sapiens PAC clone RP5-981O7 from 7q34-q36, complete sequence Length = 162556 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gaaggcatcattcaagaacc 302 |||||||||||||||||||| Sbjct: 99970 gaaggcatcattcaagaacc 99989
>gb|AC154427.2| Mus musculus BAC clone RP24-200D20 from 16, complete sequence Length = 163687 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 25304 tctcccctcccctctcctctcctc 25327
>gb|AC104894.14| Mus musculus chromosome 1, clone RP23-290I22, complete sequence Length = 185038 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 170506 tctcccctcccctctcctctcctc 170483
>emb|AL356756.4|CNS05TDG Human chromosome 14 DNA sequence BAC C-2503I6 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 191965 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 tgggatacatctttcaggct 442 |||||||||||||||||||| Sbjct: 108988 tgggatacatctttcaggct 108969
>emb|AL928547.12| Mouse DNA sequence from clone RP23-226B16 on chromosome 2, complete sequence Length = 131255 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 95469 tctcccctcccctctcctctcctc 95492
>gb|AC124990.16| Mus musculus chromosome 3, clone RP24-283J17, complete sequence Length = 190156 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 175185 tctcccctcccctctcctctcctc 175162
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cccatcccctctcctctcct 48 |||||||||||||||||||| Sbjct: 15785879 cccatcccctctcctctcct 15785898
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 ctcccatcccctctcctctcctcg 50 ||||| |||||||||||||||||| Sbjct: 19481492 ctcccctcccctctcctctcctcg 19481515
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ctgcggaactcgatcccgcg 153 |||||||||||||||||||| Sbjct: 17471000 ctgcggaactcgatcccgcg 17470981
>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162200 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ctgcggaactcgatcccgcg 153 |||||||||||||||||||| Sbjct: 8965 ctgcggaactcgatcccgcg 8946
>emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chromosome 4, complete sequence Length = 209214 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 191272 tctcccctcccctctcctctcctc 191249
>emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa0090O14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129619 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ctgcggaactcgatcccgcg 153 |||||||||||||||||||| Sbjct: 15777 ctgcggaactcgatcccgcg 15796
>gb|AC132117.3| Mus musculus BAC clone RP24-162P19 from 6, complete sequence Length = 169683 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cccatctcccatcccctctcctct 45 |||||||||| ||||||||||||| Sbjct: 77192 cccatctcccttcccctctcctct 77215
>gb|AC132312.4| Mus musculus BAC clone RP24-298A20 from 12, complete sequence Length = 177464 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cccatctcccatcccctctc 41 |||||||||||||||||||| Sbjct: 54048 cccatctcccatcccctctc 54067
>gb|AC130839.4| Mus musculus BAC clone RP24-439L9 from Y, complete sequence Length = 148806 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 120292 tctcccctcccctctcctctcctc 120315 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 119776 tctcccctcccctctcctctcctc 119799 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 81066 tctcccctcccctctcctctcctc 81089
>gb|AC140403.3| Mus musculus BAC clone RP23-144M22 from 15, complete sequence Length = 192144 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cccttctcttccggcctcccatct 28 |||||||||||| ||||||||||| Sbjct: 37070 cccttctcttcctgcctcccatct 37047
>gb|AC160112.2| Mus musculus BAC clone RP24-80F17 from chromosome 12, complete sequence Length = 230823 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cccatctcccatcccctctc 41 |||||||||||||||||||| Sbjct: 9309 cccatctcccatcccctctc 9290
>emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chromosome X, complete sequence Length = 192322 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 154241 tctcccctcccctctcctctcctc 154264
>emb|AL773566.6| Mouse DNA sequence from clone RP23-181C9 on chromosome 2, complete sequence Length = 184254 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 7701 tctcccctcccctctcctctcctc 7724
>emb|AL807793.7| Mouse DNA sequence from clone RP23-33N15 on chromosome 2, complete sequence Length = 221903 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 154343 tctcccctcccctctcctctcctc 154320
>emb|AL583883.12| Mouse DNA sequence from clone RP23-400F7 on chromosome 15, complete sequence Length = 209857 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 208636 tctcccctcccctctcctctcctc 208613
>emb|AL607109.21| Mouse DNA sequence from clone RP23-352D7 on chromosome 4, complete sequence Length = 187252 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 109503 tctcccctcccctctcctctcctc 109480
>dbj|AP000886.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1750A9 Length = 220495 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 atttcaagatgatcaacagt 334 |||||||||||||||||||| Sbjct: 158666 atttcaagatgatcaacagt 158647
>emb|AL603826.18| Mouse DNA sequence from clone RP23-206P11 on chromosome 11, complete sequence Length = 145299 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcccatcccctctcctctcctc 49 |||||| ||||||||||||||||| Sbjct: 119865 tctcccctcccctctcctctcctc 119888 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,758,597 Number of Sequences: 3902068 Number of extensions: 5758597 Number of successful extensions: 203551 Number of sequences better than 10.0: 169 Number of HSP's better than 10.0 without gapping: 170 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 201736 Number of HSP's gapped (non-prelim): 1815 length of query: 485 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 463 effective length of database: 17,147,199,772 effective search space: 7939153494436 effective search space used: 7939153494436 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
