No.
Definition
Score (bits)
E Value
1 dbj|AK106043.1| Oryza sativa (japonica cultivar-group) cDNA clon...
272
9e-70
2 dbj|AK065358.1| Oryza sativa (japonica cultivar-group) cDNA clon...
272
9e-70
3 dbj|AK059056.1| Oryza sativa (japonica cultivar-group) cDNA clon...
272
9e-70
4 ref|NM_191551.1| Oryza sativa (japonica cultivar-group), predic...
270
4e-69
5 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
212
7e-52
6 dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic D...
212
7e-52
7 dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic D...
212
7e-52
8 emb|AL691513.13| Mouse DNA sequence from clone RP23-451C8 on chr...
44
0.39
9 gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co...
42
1.5
10 gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, co...
42
1.5
11 gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome...
42
1.5
12 gb|AC163394.4| Mus musculus chromosome 15, clone RP24-241D13, co...
42
1.5
13 gb|AC102847.3| Mus musculus, clone RP24-406I1, complete sequence
42
1.5
14 emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos...
42
1.5
15 emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ...
42
1.5
16 gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence
42
1.5
17 gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, com...
42
1.5
18 dbj|AK022038.1| Homo sapiens cDNA FLJ11976 fis, clone HEMBB1001253
42
1.5
19 gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp...
42
1.5
20 gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, com...
42
1.5
21 gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
42
1.5
22 gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
40
6.1
23 gb|AC165090.3| Mus musculus BAC clone RP23-95H4 from chromosome ...
40
6.1
24 emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on ch...
40
6.1
25 emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete ...
40
6.1
26 emb|BX640424.1| Bordetella parapertussis strain 12822, complete ...
40
6.1
27 emb|BX640423.1| Bordetella parapertussis strain 12822, complete ...
40
6.1
28 emb|AJ007747.1|BBR007747 Bordetella bronchiseptica cosmid BbLPS1
40
6.1
29 gb|AC107623.2| Homo sapiens chromosome 3 clone RP11-648C16, comp...
40
6.1
30 gb|AC096970.2| Homo sapiens chromosome 3 clone RP11-321A23, comp...
40
6.1
31 gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Canc...
40
6.1
32 gb|AC024937.21| Homo sapiens 3 BAC RP11-480A16 (Roswell Park Can...
40
6.1
33 gb|AC124944.8| Homo sapiens 3 BAC RP11-352G9 (Roswell Park Cance...
40
6.1
34 gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com...
40
6.1
35 gb|AC002319.1|AC002319 Homo sapiens chromosome 9q34, clone 70C11...
40
6.1
36 gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complet...
40
6.1
37 gb|AC001643.1|AC001643 Genomic sequence from Human 9q34, complet...
40
6.1
>dbj|AK106043.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-206-E03, full
insert sequence
Length = 1617
Score = 272 bits (137), Expect = 9e-70
Identities = 301/355 (84%), Gaps = 3/355 (0%)
Strand = Plus / Plus
Query: 100 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 159
|||||||||||||||| |||| | || | |||| |||||| ||||||| || |||||
Sbjct: 71 ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 127
Query: 160 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 219
||||||||| ||||| |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 128 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 187
Query: 220 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggcgaacgtcgg 279
|| ||||| |||||||| || ||| ||| || |||||||||||||| |||||||||
Sbjct: 188 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 247
Query: 280 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 339
| |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 248 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 307
Query: 340 gggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactac 399
|||||||||||||||||||| |||||||||||||| || |||||||||||| || ||
Sbjct: 308 aggcaagggtggcgtcggcgtgaacgtgaagcctggttacggcaagcccggcggcaccac 367
Query: 400 ggtcggcgtcggcaagggcggcgtgggtgtcaacgtcaagcctggctacggcaag 454
|||||||||||| |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 368 ggtcggcgtcgggaagggcggcgtgggagtcaacgtcaagcctggctatggcaag 422
Score = 75.8 bits (38), Expect = 1e-10
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 403
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 519 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 578
Query: 404 ggcgtcggcaagggcggcgtgggtgtcaacgtcaagcc 441
|||||||| ||||||||||| || |||||||| |||||
Sbjct: 579 ggcgtcgggaagggcggcgtcggcgtcaacgtgaagcc 616
Score = 73.8 bits (37), Expect = 4e-10
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 350 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 409
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 456 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 515
Query: 410 ggcaagggcggcgtgggtgtcaacgtcaagcctggctacggcaag 454
|| ||||||||||| || || ||||| |||| ||||||||||||
Sbjct: 516 ggtaagggcggcgtcggcgtgaacgtgcagccaggctacggcaag 560
Score = 56.0 bits (28), Expect = 1e-04
Identities = 106/132 (80%)
Strand = Plus / Plus
Query: 323 ggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgcc 382
||||| ||||||| || || ||||| ||||| || |||||||| ||||||||| | |
Sbjct: 360 ggcaccacggtcggcgtcgggaagggcggcgtgggagtcaacgtcaagcctggctatggc 419
Query: 383 aagcccggcgggactacggtcggcgtcggcaagggcggcgtgggtgtcaacgtcaagcct 442
|||||||| || || | ||||||||||| || || |||||||| || ||||| |||||
Sbjct: 420 aagcccggaggcaccagcgtcggcgtcgggaaaggaggcgtgggcgtgaacgtgcagcct 479
Query: 443 ggctacggcaag 454
|| |||||||||
Sbjct: 480 gggtacggcaag 491
>dbj|AK065358.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013011A15, full
insert sequence
Length = 1618
Score = 272 bits (137), Expect = 9e-70
Identities = 301/355 (84%), Gaps = 3/355 (0%)
Strand = Plus / Plus
Query: 100 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 159
|||||||||||||||| |||| | || | |||| |||||| ||||||| || |||||
Sbjct: 72 ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 128
Query: 160 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 219
||||||||| ||||| |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 129 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 188
Query: 220 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggcgaacgtcgg 279
|| ||||| |||||||| || ||| ||| || |||||||||||||| |||||||||
Sbjct: 189 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 248
Query: 280 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 339
| |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 249 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 308
Query: 340 gggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactac 399
|||||||||||||||||||| |||||||||||||| || |||||||||||| || ||
Sbjct: 309 aggcaagggtggcgtcggcgtgaacgtgaagcctggttacggcaagcccggcggcaccac 368
Query: 400 ggtcggcgtcggcaagggcggcgtgggtgtcaacgtcaagcctggctacggcaag 454
|||||||||||| |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 369 ggtcggcgtcgggaagggcggcgtgggagtcaacgtcaagcctggctatggcaag 423
Score = 75.8 bits (38), Expect = 1e-10
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 403
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 520 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 579
Query: 404 ggcgtcggcaagggcggcgtgggtgtcaacgtcaagcc 441
|||||||| ||||||||||| || |||||||| |||||
Sbjct: 580 ggcgtcgggaagggcggcgtcggcgtcaacgtgaagcc 617
Score = 73.8 bits (37), Expect = 4e-10
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 350 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 409
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 457 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 516
Query: 410 ggcaagggcggcgtgggtgtcaacgtcaagcctggctacggcaag 454
|| ||||||||||| || || ||||| |||| ||||||||||||
Sbjct: 517 ggtaagggcggcgtcggcgtgaacgtgcagccaggctacggcaag 561
Score = 56.0 bits (28), Expect = 1e-04
Identities = 106/132 (80%)
Strand = Plus / Plus
Query: 323 ggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgcc 382
||||| ||||||| || || ||||| ||||| || |||||||| ||||||||| | |
Sbjct: 361 ggcaccacggtcggcgtcgggaagggcggcgtgggagtcaacgtcaagcctggctatggc 420
Query: 383 aagcccggcgggactacggtcggcgtcggcaagggcggcgtgggtgtcaacgtcaagcct 442
|||||||| || || | ||||||||||| || || |||||||| || ||||| |||||
Sbjct: 421 aagcccggaggcaccagcgtcggcgtcgggaaaggaggcgtgggcgtgaacgtgcagcct 480
Query: 443 ggctacggcaag 454
|| |||||||||
Sbjct: 481 gggtacggcaag 492
>dbj|AK059056.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-021-F04, full
insert sequence
Length = 1616
Score = 272 bits (137), Expect = 9e-70
Identities = 301/355 (84%), Gaps = 3/355 (0%)
Strand = Plus / Plus
Query: 100 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 159
|||||||||||||||| |||| | || | |||| |||||| ||||||| || |||||
Sbjct: 63 ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 119
Query: 160 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 219
||||||||| ||||| |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 120 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 179
Query: 220 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggcgaacgtcgg 279
|| ||||| |||||||| || ||| ||| || |||||||||||||| |||||||||
Sbjct: 180 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 239
Query: 280 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 339
| |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 240 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 299
Query: 340 gggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactac 399
|||||||||||||||||||| |||||||||||||| || |||||||||||| || ||
Sbjct: 300 aggcaagggtggcgtcggcgtgaacgtgaagcctggttacggcaagcccggcggcaccac 359
Query: 400 ggtcggcgtcggcaagggcggcgtgggtgtcaacgtcaagcctggctacggcaag 454
|||||||||||| |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 360 ggtcggcgtcgggaagggcggcgtgggagtcaacgtcaagcctggctatggcaag 414
Score = 75.8 bits (38), Expect = 1e-10
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 403
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 511 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 570
Query: 404 ggcgtcggcaagggcggcgtgggtgtcaacgtcaagcc 441
|||||||| ||||||||||| || |||||||| |||||
Sbjct: 571 ggcgtcgggaagggcggcgtcggcgtcaacgtgaagcc 608
Score = 73.8 bits (37), Expect = 4e-10
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 350 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 409
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 448 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 507
Query: 410 ggcaagggcggcgtgggtgtcaacgtcaagcctggctacggcaag 454
|| ||||||||||| || || ||||| |||| ||||||||||||
Sbjct: 508 ggtaagggcggcgtcggcgtgaacgtgcagccaggctacggcaag 552
Score = 56.0 bits (28), Expect = 1e-04
Identities = 106/132 (80%)
Strand = Plus / Plus
Query: 323 ggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgcc 382
||||| ||||||| || || ||||| ||||| || |||||||| ||||||||| | |
Sbjct: 352 ggcaccacggtcggcgtcgggaagggcggcgtgggagtcaacgtcaagcctggctatggc 411
Query: 383 aagcccggcgggactacggtcggcgtcggcaagggcggcgtgggtgtcaacgtcaagcct 442
|||||||| || || | ||||||||||| || || |||||||| || ||||| |||||
Sbjct: 412 aagcccggaggcaccagcgtcggcgtcgggaaaggaggcgtgggcgtgaacgtgcagcct 471
Query: 443 ggctacggcaag 454
|| |||||||||
Sbjct: 472 gggtacggcaag 483
>dbj|AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 212 bits (107), Expect = 7e-52
Identities = 176/199 (88%)
Strand = Plus / Plus
Query: 256 cggaggcacgtcggcgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 315
|||||||||||||| |||||||||| |||||||||||||||||||||||| || || |
Sbjct: 30584378 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 30584437
Query: 316 gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 375
||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 30584438 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 30584497
Query: 376 cagcgccaagcccggcgggactacggtcggcgtcggcaagggcggcgtgggtgtcaacgt 435
|| |||||||||||| || |||||||||||||| |||||||||||||| ||||||||
Sbjct: 30584498 ttacggcaagcccggcggcaccacggtcggcgtcgggaagggcggcgtgggagtcaacgt 30584557
Query: 436 caagcctggctacggcaag 454
|||||||||||| ||||||
Sbjct: 30584558 caagcctggctatggcaag 30584576
Score = 81.8 bits (41), Expect = 2e-12
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 145 gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 204
|||||| || |||||||||||||| ||||| |||||| |||||||||| | || |||||
Sbjct: 30583798 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 30583857
Query: 205 tcccaacactcccatgccaagctccctctctca 237
||||||| ||||||| || ||||| ||||||||
Sbjct: 30583858 tcccaactctcccatcccgagctcgctctctca 30583890
Score = 75.8 bits (38), Expect = 1e-10
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 403
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 30584673 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 30584732
Query: 404 ggcgtcggcaagggcggcgtgggtgtcaacgtcaagcc 441
|||||||| ||||||||||| || |||||||| |||||
Sbjct: 30584733 ggcgtcgggaagggcggcgtcggcgtcaacgtgaagcc 30584770
Score = 73.8 bits (37), Expect = 4e-10
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 350 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 409
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 30584610 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 30584669
Query: 410 ggcaagggcggcgtgggtgtcaacgtcaagcctggctacggcaag 454
|| ||||||||||| || || ||||| |||| ||||||||||||
Sbjct: 30584670 ggtaagggcggcgtcggcgtgaacgtgcagccaggctacggcaag 30584714
Score = 56.0 bits (28), Expect = 1e-04
Identities = 106/132 (80%)
Strand = Plus / Plus
Query: 323 ggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgcc 382
||||| ||||||| || || ||||| ||||| || |||||||| ||||||||| | |
Sbjct: 30584514 ggcaccacggtcggcgtcgggaagggcggcgtgggagtcaacgtcaagcctggctatggc 30584573
Query: 383 aagcccggcgggactacggtcggcgtcggcaagggcggcgtgggtgtcaacgtcaagcct 442
|||||||| || || | ||||||||||| || || |||||||| || ||||| |||||
Sbjct: 30584574 aagcccggaggcaccagcgtcggcgtcgggaaaggaggcgtgggcgtgaacgtgcagcct 30584633
Query: 443 ggctacggcaag 454
|| |||||||||
Sbjct: 30584634 gggtacggcaag 30584645
>dbj|AP003309.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OSJNBb0036G09
Length = 124118
Score = 212 bits (107), Expect = 7e-52
Identities = 176/199 (88%)
Strand = Plus / Plus
Query: 256 cggaggcacgtcggcgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 315
|||||||||||||| |||||||||| |||||||||||||||||||||||| || || |
Sbjct: 66982 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 67041
Query: 316 gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 375
||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 67042 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 67101
Query: 376 cagcgccaagcccggcgggactacggtcggcgtcggcaagggcggcgtgggtgtcaacgt 435
|| |||||||||||| || |||||||||||||| |||||||||||||| ||||||||
Sbjct: 67102 ttacggcaagcccggcggcaccacggtcggcgtcgggaagggcggcgtgggagtcaacgt 67161
Query: 436 caagcctggctacggcaag 454
|||||||||||| ||||||
Sbjct: 67162 caagcctggctatggcaag 67180
Score = 81.8 bits (41), Expect = 2e-12
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 145 gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 204
|||||| || |||||||||||||| ||||| |||||| |||||||||| | || |||||
Sbjct: 66402 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 66461
Query: 205 tcccaacactcccatgccaagctccctctctca 237
||||||| ||||||| || ||||| ||||||||
Sbjct: 66462 tcccaactctcccatcccgagctcgctctctca 66494
Score = 75.8 bits (38), Expect = 1e-10
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 403
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 67277 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 67336
Query: 404 ggcgtcggcaagggcggcgtgggtgtcaacgtcaagcc 441
|||||||| ||||||||||| || |||||||| |||||
Sbjct: 67337 ggcgtcgggaagggcggcgtcggcgtcaacgtgaagcc 67374
Score = 73.8 bits (37), Expect = 4e-10
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 350 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 409
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 67214 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 67273
Query: 410 ggcaagggcggcgtgggtgtcaacgtcaagcctggctacggcaag 454
|| ||||||||||| || || ||||| |||| ||||||||||||
Sbjct: 67274 ggtaagggcggcgtcggcgtgaacgtgcagccaggctacggcaag 67318
Score = 56.0 bits (28), Expect = 1e-04
Identities = 106/132 (80%)
Strand = Plus / Plus
Query: 323 ggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgcc 382
||||| ||||||| || || ||||| ||||| || |||||||| ||||||||| | |
Sbjct: 67118 ggcaccacggtcggcgtcgggaagggcggcgtgggagtcaacgtcaagcctggctatggc 67177
Query: 383 aagcccggcgggactacggtcggcgtcggcaagggcggcgtgggtgtcaacgtcaagcct 442
|||||||| || || | ||||||||||| || || |||||||| || ||||| |||||
Sbjct: 67178 aagcccggaggcaccagcgtcggcgtcgggaaaggaggcgtgggcgtgaacgtgcagcct 67237
Query: 443 ggctacggcaag 454
|| |||||||||
Sbjct: 67238 gggtacggcaag 67249
>dbj|AP003560.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1060H01
Length = 157987
Score = 212 bits (107), Expect = 7e-52
Identities = 176/199 (88%)
Strand = Plus / Plus
Query: 256 cggaggcacgtcggcgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 315
|||||||||||||| |||||||||| |||||||||||||||||||||||| || || |
Sbjct: 26655 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 26714
Query: 316 gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 375
||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 26715 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 26774
Query: 376 cagcgccaagcccggcgggactacggtcggcgtcggcaagggcggcgtgggtgtcaacgt 435
|| |||||||||||| || |||||||||||||| |||||||||||||| ||||||||
Sbjct: 26775 ttacggcaagcccggcggcaccacggtcggcgtcgggaagggcggcgtgggagtcaacgt 26834
Query: 436 caagcctggctacggcaag 454
|||||||||||| ||||||
Sbjct: 26835 caagcctggctatggcaag 26853
Score = 81.8 bits (41), Expect = 2e-12
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 145 gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 204
|||||| || |||||||||||||| ||||| |||||| |||||||||| | || |||||
Sbjct: 26075 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 26134
Query: 205 tcccaacactcccatgccaagctccctctctca 237
||||||| ||||||| || ||||| ||||||||
Sbjct: 26135 tcccaactctcccatcccgagctcgctctctca 26167
Score = 75.8 bits (38), Expect = 1e-10
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 403
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 26950 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 27009
Query: 404 ggcgtcggcaagggcggcgtgggtgtcaacgtcaagcc 441
|||||||| ||||||||||| || |||||||| |||||
Sbjct: 27010 ggcgtcgggaagggcggcgtcggcgtcaacgtgaagcc 27047
Score = 73.8 bits (37), Expect = 4e-10
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 350 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 409
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 26887 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 26946
Query: 410 ggcaagggcggcgtgggtgtcaacgtcaagcctggctacggcaag 454
|| ||||||||||| || || ||||| |||| ||||||||||||
Sbjct: 26947 ggtaagggcggcgtcggcgtgaacgtgcagccaggctacggcaag 26991
Score = 56.0 bits (28), Expect = 1e-04
Identities = 106/132 (80%)
Strand = Plus / Plus
Query: 323 ggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgcc 382
||||| ||||||| || || ||||| ||||| || |||||||| ||||||||| | |
Sbjct: 26791 ggcaccacggtcggcgtcgggaagggcggcgtgggagtcaacgtcaagcctggctatggc 26850
Query: 383 aagcccggcgggactacggtcggcgtcggcaagggcggcgtgggtgtcaacgtcaagcct 442
|||||||| || || | ||||||||||| || || |||||||| || ||||| |||||
Sbjct: 26851 aagcccggaggcaccagcgtcggcgtcgggaaaggaggcgtgggcgtgaacgtgcagcct 26910
Query: 443 ggctacggcaag 454
|| |||||||||
Sbjct: 26911 gggtacggcaag 26922
>emb|AL162417.23 | Human DNA sequence from clone RP11-326L24 on chromosome 9q34.13-34.3
Contains the GTF3C5 gene for general transcription factor
IIIC polypeptide 5 63kDa, the CEL gene for carboxyl ester
lipase (bile salt-stimulated lipase), the CELP gene for
carboxyl ester lipase pseudogene, the RALGDS gene for ral
guanine nucleotide dissociation stimulator, the gene for
Forssman glycolipid synthetase (FS), three novel genes and
six CpG islands, complete sequence
Length = 152863
Score = 40.1 bits (20), Expect = 6.1
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tgctgccctctgccctgccc 100
||||||||||||||||||||
Sbjct: 119706 tgctgccctctgccctgccc 119725
>gb|AC001643.1 |AC001643 Genomic sequence from Human 9q34, complete sequence
Length = 40203
Score = 40.1 bits (20), Expect = 6.1
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tgctgccctctgccctgccc 100
||||||||||||||||||||
Sbjct: 20582 tgctgccctctgccctgccc 20601
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,939,968
Number of Sequences: 3902068
Number of extensions: 2939968
Number of successful extensions: 65770
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65183
Number of HSP's gapped (non-prelim): 573
length of query: 454
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 432
effective length of database: 17,147,199,772
effective search space: 7407590301504
effective search space used: 7407590301504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)