ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet132c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1S17P_WHEAT (P46285) Sedoheptulose-1,7-bisphosphatase, chloroplas... 246 2e-65
2S17P_SPIOL (O20252) Sedoheptulose-1,7-bisphosphatase, chloroplas... 127 2e-29
3S17P_ARATH (P46283) Sedoheptulose-1,7-bisphosphatase, chloroplas... 127 2e-29
4S17P_CHLRE (P46284) Sedoheptulose-1,7-bisphosphatase, chloroplas... 107 2e-23
5GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 ... 35 0.089
6EM3_WHEAT (Q08000) Em protein H2 33 0.44
7LE19B_HORVU (P46532) Late embryogenesis abundant protein B19.1B 33 0.58
8COHA1_MESAU (Q9JMH4) Collagen alpha-1(XVII) chain (Bullous pemph... 32 0.75
9GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW21... 32 0.75
10NCKX1_BISBI (O46383) Sodium/potassium/calcium exchanger 1 (Na(+)... 32 1.3
11NCKX1_BOVIN (Q28139) Sodium/potassium/calcium exchanger 1 (Na(+)... 32 1.3
12LE19A_HORVU (Q05190) Late embryogenesis abundant protein B19.1A ... 32 1.3
13WDR50_MOUSE (Q5SSI6) WD-repeat protein 50 31 2.2
14COHA1_MOUSE (Q07563) Collagen alpha-1(XVII) chain (Bullous pemph... 31 2.2
15CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Conta... 30 2.9
16SEEP_RAPSA (P11573) Late seed maturation protein P8B6 30 2.9
17VNUA_PRVKA (P33485) Probable nuclear antigen 30 2.9
18CD2A2_MONDO (O77618) Cyclin-dependent kinase inhibitor 2A, isofo... 30 3.7
19CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor 30 3.7
20AROB_XANAC (Q8PI87) 3-dehydroquinate synthase (EC 4.2.3.4) 30 3.7
21CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contain... 30 3.7
22IF2_STRAW (Q82K53) Translation initiation factor IF-2 30 4.9
23EMP1_ORYSA (P46520) Embryonic abundant protein 1 30 4.9
24EM2_WHEAT (P22701) Em protein CS41 30 4.9
25CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Conta... 29 6.4
26SOX10_HUMAN (P56693) Transcription factor SOX-10 29 6.4
27EM1_WHEAT (P04568) Em protein 29 6.4
28SODC_HORSE (P00443) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1) 29 6.4
29ALGE4_AZOVI (Q44493) Poly(beta-D-mannuronate) C5 epimerase 4 (EC... 29 8.3
30CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor 29 8.3
31IR09_HCMVA (P16807) Hypothetical protein IRL9 (TRL9) 29 8.3

>S17P_WHEAT (P46285) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor|
           (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase)
           (SED(1,7)P2ase)
          Length = 393

 Score =  246 bits (629), Expect = 2e-65
 Identities = 124/124 (100%), Positives = 124/124 (100%)
 Frame = +2

Query: 134 TRSPACCAAMSFSQSYRPKAARPATSFYGESLRANTARTSFPAGRQSKAASRAALTTRCA 313
           TRSPACCAAMSFSQSYRPKAARPATSFYGESLRANTARTSFPAGRQSKAASRAALTTRCA
Sbjct: 15  TRSPACCAAMSFSQSYRPKAARPATSFYGESLRANTARTSFPAGRQSKAASRAALTTRCA 74

Query: 314 IGDSLEEFLTKATPDKNLIRLLICMGEAMRTIAFKVRTASCGGTACVNSFGDEQLAVDML 493
           IGDSLEEFLTKATPDKNLIRLLICMGEAMRTIAFKVRTASCGGTACVNSFGDEQLAVDML
Sbjct: 75  IGDSLEEFLTKATPDKNLIRLLICMGEAMRTIAFKVRTASCGGTACVNSFGDEQLAVDML 134

Query: 494 ADKL 505
           ADKL
Sbjct: 135 ADKL 138



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>S17P_SPIOL (O20252) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor|
           (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase)
           (SED(1,7)P2ase)
          Length = 387

 Score =  127 bits (319), Expect = 2e-29
 Identities = 63/101 (62%), Positives = 78/101 (77%)
 Frame = +2

Query: 203 ATSFYGESLRANTARTSFPAGRQSKAASRAALTTRCAIGDSLEEFLTKATPDKNLIRLLI 382
           ++S +GESLR  T  +      +   A  ++L T+C +GDSLEEFL KAT DK LIRL++
Sbjct: 37  SSSLFGESLRMTTKSSV-----RVNKAKNSSLVTKCELGDSLEEFLAKATTDKGLIRLMM 91

Query: 383 CMGEAMRTIAFKVRTASCGGTACVNSFGDEQLAVDMLADKL 505
           CMGEA+RTI FKVRTASCGGT CVN+FGDEQLA+D+LADKL
Sbjct: 92  CMGEALRTIGFKVRTASCGGTQCVNTFGDEQLAIDVLADKL 132



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>S17P_ARATH (P46283) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor|
           (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase)
           (SED(1,7)P2ase)
          Length = 393

 Score =  127 bits (319), Expect = 2e-29
 Identities = 75/124 (60%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
 Frame = +2

Query: 137 RSPACCAAMSFSQSYRPKAARPATSFYGESLRANTARTSFPAGRQSKAASRAALT-TRCA 313
           RS    +  S+S S   K  + ++S +G+SLR    ++   A   +KA S  A T T+C 
Sbjct: 21  RSSTLVSPPSYSTSSSFKRLK-SSSIFGDSLRL-APKSQLKA---TKAKSNGASTVTKCE 75

Query: 314 IGDSLEEFLTKATPDKNLIRLLICMGEAMRTIAFKVRTASCGGTACVNSFGDEQLAVDML 493
           IG SLEEFL +ATPDK L  LL+CMGEA+RTIAFKVRTASCGGTACVNSFGDEQLAVDML
Sbjct: 76  IGQSLEEFLAQATPDKGLRTLLMCMGEALRTIAFKVRTASCGGTACVNSFGDEQLAVDML 135

Query: 494 ADKL 505
           ADKL
Sbjct: 136 ADKL 139



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>S17P_CHLRE (P46284) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor|
           (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase)
           (SED(1,7)P2ase)
          Length = 389

 Score =  107 bits (267), Expect = 2e-23
 Identities = 59/105 (56%), Positives = 74/105 (70%)
 Frame = +2

Query: 191 AARPATSFYGESLRANTARTSFPAGRQSKAASRAALTTRCAIGDSLEEFLTKATPDKNLI 370
           A+  A++F G ++ A    ++  A  QS+   R A+ T+  IGDSL EFL +ATPD  L 
Sbjct: 37  ASANASAFKGAAVTARVKASTRAARVQSR---RTAVLTQAKIGDSLAEFLVEATPDPKLR 93

Query: 371 RLLICMGEAMRTIAFKVRTASCGGTACVNSFGDEQLAVDMLADKL 505
            +++ M EA RTIA KVRTASC GTACVNSFGDEQLAVDM+ADKL
Sbjct: 94  HVMMSMAEATRTIAHKVRTASCAGTACVNSFGDEQLAVDMVADKL 138



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>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 precursor|
          Length = 839

 Score = 35.4 bits (80), Expect = 0.089
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = +1

Query: 241 GEDVVPGGEAVQGGESRGAHHPVRYRRQPGGV--PDQGDAGQEPHQAADLHGGGDEDDRL 414
           G+    G +  Q G+ +  ++P   + QPG +  P QG  GQ+P QA      G      
Sbjct: 185 GQQPGQGQQGQQPGQGQPGYYPTSSQLQPGQLQQPAQGQQGQQPGQAQQGQQPGQGQQPG 244

Query: 415 QGQDG 429
           QGQ G
Sbjct: 245 QGQQG 249



 Score = 32.3 bits (72), Expect = 0.75
 Identities = 20/66 (30%), Positives = 28/66 (42%)
 Frame = +1

Query: 226 AAGEHGEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEPHQAADLHGGGDED 405
           A G+ G+ +  G +  Q G+ +    P +   Q G  P QG  GQ+P Q       G   
Sbjct: 586 AQGQQGQQLGQGQQGQQPGQGQQGQQPAQ--GQQGQQPGQGQHGQQPGQGQQGQQPGQGQ 643

Query: 406 DRLQGQ 423
              QGQ
Sbjct: 644 QPGQGQ 649



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>EM3_WHEAT (Q08000) Em protein H2|
          Length = 93

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = +1

Query: 241 GEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEPHQAADLHGGGDEDDRLQG 420
           GE VVPGG    GG+S  AH  +   R  GG   +   G+E +      GG   +D   G
Sbjct: 18  GETVVPGGT---GGKSLEAHENLAEGRSRGGQTRREQMGEEGYSEMGRKGGLSTNDESGG 74

Query: 421 Q 423
           +
Sbjct: 75  E 75



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>LE19B_HORVU (P46532) Late embryogenesis abundant protein B19.1B|
          Length = 93

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = +1

Query: 241 GEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEPHQAADLHGGGDEDDRLQG 420
           GE VVPGG    GG+S  AH  +   R  GG   +   G+E +      GG   +D   G
Sbjct: 18  GETVVPGGT---GGKSLEAHDNLAEGRSRGGQTRREQMGEEGYSEMGRKGGLSTNDESGG 74

Query: 421 Q 423
           +
Sbjct: 75  E 75



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>COHA1_MESAU (Q9JMH4) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen 2)|
            (180 kDa bullous pemphigoid antigen 2)
          Length = 1431

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 232  GEHGEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVP 339
            G+ G+  VPG   + GG S G      YR+ P G P
Sbjct: 948  GDQGDPGVPGTPGIPGGHSHGESSSTTYRQGPPGPP 983



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>GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW212 precursor|
          Length = 838

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = +1

Query: 187 QGCQAGDLVLRRVAAGEHGEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEP 366
           QG Q G L  ++ A G+ G+ +  G +  Q  + +    P +   Q G    QG  GQ+P
Sbjct: 553 QGQQPGQL--QQPAQGQQGQQLAQGQQGQQPAQVQQGQQPAQ--GQQGQQLGQGQQGQQP 608

Query: 367 HQAADLHGGGDEDDRLQGQDG 429
            Q      G       QGQ G
Sbjct: 609 GQGQQPAQGQQGQQPGQGQQG 629



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>NCKX1_BISBI (O46383) Sodium/potassium/calcium exchanger 1|
           (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod
           Na-Ca+K exchanger) (Fragment)
          Length = 300

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = +1

Query: 226 AAGEHGEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVP-----DQGDAGQEPHQAADLHG 390
           A GE+GE    GG+A  GGES G           G +P     D  D G+   +  ++ G
Sbjct: 26  AEGENGER--SGGDAALGGESEGKAE----NESEGDIPAERRGDDEDEGEIQAEGGEVKG 79

Query: 391 GGDEDDRLQGQDG 429
             DE +   G+ G
Sbjct: 80  DEDEGEIQAGEGG 92



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>NCKX1_BOVIN (Q28139) Sodium/potassium/calcium exchanger 1|
           (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod
           Na-Ca+K exchanger)
          Length = 1216

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = +1

Query: 226 AAGEHGEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVP-----DQGDAGQEPHQAADLHG 390
           A GE+GE    GG+A  GGES G           G +P     D  D G+   +  ++ G
Sbjct: 758 AEGENGER--SGGDAALGGESEGKAE----NESEGDIPAERRGDDEDEGEIQAEGGEVKG 811

Query: 391 GGDEDDRLQGQDG 429
             DE +   G+ G
Sbjct: 812 DEDEGEIQAGEGG 824



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>LE19A_HORVU (Q05190) Late embryogenesis abundant protein B19.1A (B19.1)|
          Length = 93

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 21/61 (34%), Positives = 27/61 (44%)
 Frame = +1

Query: 241 GEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEPHQAADLHGGGDEDDRLQG 420
           GE VVPGG    GG+S  A   +   R  GG   +   GQE +      GG   +D   G
Sbjct: 18  GETVVPGGT---GGKSLEAQQNLAEGRSRGGQTRREQMGQEGYSEMGRKGGLSSNDESGG 74

Query: 421 Q 423
           +
Sbjct: 75  E 75



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>WDR50_MOUSE (Q5SSI6) WD-repeat protein 50|
          Length = 552

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 313 YRRQPGGVPDQGDAGQEPHQAADLHGGGDEDDRLQ 417
           ++   GGVPD  +AG +   ++D     DEDD LQ
Sbjct: 181 FQHAMGGVPDWAEAGSKRRTSSDDESEEDEDDLLQ 215



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>COHA1_MOUSE (Q07563) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen 2)|
            (180 kDa bullous pemphigoid antigen 2)
          Length = 1470

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 232  GEHGEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVP 339
            G+ G+  VPG   + GG S GA     Y + P G P
Sbjct: 951  GDQGDPGVPGTPGISGGLSHGASSSTLYMQGPPGPP 986



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>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1418

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 24/71 (33%), Positives = 28/71 (39%)
 Frame = +1

Query: 220 RVAAGEHGEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEPHQAADLHGGGD 399
           R A GE GE   PG   + G        P     QPG   +QG+AGQ+    A    G  
Sbjct: 749 RGAPGERGETGPPGTSGIAG--------PPGADGQPGAKGEQGEAGQKGDAGAPGPQGPS 800

Query: 400 EDDRLQGQDGV 432
                QG  GV
Sbjct: 801 GAPGPQGPTGV 811



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>SEEP_RAPSA (P11573) Late seed maturation protein P8B6|
          Length = 83

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 241 GEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEPHQAADLHGGG--DEDDRL 414
           GE VVPGG    GG+S  A   +   R  GG   +   G E +Q     GG   D+ D+ 
Sbjct: 17  GETVVPGGT---GGKSFEAQQHLAEGRSRGGNTRKEQLGSEGYQQMGRKGGSTPDKTDKE 73

Query: 415 QGQD 426
             +D
Sbjct: 74  DAED 77



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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +1

Query: 256  PG-GEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEPHQAADLHGGGDEDDRLQG 420
            PG G   +G E RG          PGG+   G      HQ    HG GDE DR++G
Sbjct: 1043 PGRGHVGRGEEGRGVG--------PGGLAGAGPVHAVAHQRR--HGAGDEGDRVRG 1088



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>CD2A2_MONDO (O77618) Cyclin-dependent kinase inhibitor 2A, isoform 2 (p19ARF)|
          Length = 155

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
 Frame = +1

Query: 208 LVLRRVAAGEHGED---VVPGGE--AVQGGESRGAH---HPVRYRRQPGGVPDQGDAGQE 363
           +V ++   G  G D     PG    AV+GG         HP   RR PGG+P   DA   
Sbjct: 49  IVRKKRHRGRSGHDDGQCTPGSNPVAVRGGTQHPRPDNPHPASPRRCPGGLPGHSDAAPS 108

Query: 364 PHQAADLHG 390
              AA   G
Sbjct: 109 GRGAAGCQG 117



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>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 23/71 (32%), Positives = 26/71 (36%)
 Frame = +1

Query: 220 RVAAGEHGEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEPHQAADLHGGGD 399
           R AAGE G D VPGG  ++G               PGG    G  G    Q      G  
Sbjct: 518 RGAAGEPGRDGVPGGPGMRGMPG-----------SPGGPGSDGKPGPPGSQGESGRPGPP 566

Query: 400 EDDRLQGQDGV 432
                +GQ GV
Sbjct: 567 GPSGPRGQPGV 577



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>AROB_XANAC (Q8PI87) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 370

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
 Frame = +2

Query: 170 SQSYRPKAARPATSFYGESLRANTAR-TSFPAGRQSKAASRAALTTRCAIGDSLEEFLTK 346
           S+S     A+P T      L A+ AR  S   GR +   S + +    A G  +   L++
Sbjct: 7   SRSVDVDGAQPYTITIAPGLLADGARLASHVRGRHALLLSDSQVAPHYAAG--VRAALSR 64

Query: 347 ATPDKNLIRLLICMGEAMRTI----AFKVRTASCGGT--ACVNSFG 466
           A PD  +  L+I  GEA +T+    +     A  G T  ACV + G
Sbjct: 65  ARPDLQVGELVIAAGEASKTLETFGSAITALAELGATRDACVFALG 110



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>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1419

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 25/71 (35%), Positives = 27/71 (38%)
 Frame = +1

Query: 220 RVAAGEHGEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEPHQAADLHGGGD 399
           R A GE GE   PG     G        P     QPG   DQG+AGQ+    A    G  
Sbjct: 750 RGAPGERGETGPPGPAGFAG--------PPGADGQPGAKGDQGEAGQKGDAGAPGPQGPS 801

Query: 400 EDDRLQGQDGV 432
                QG  GV
Sbjct: 802 GAPGPQGPTGV 812



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>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 21/58 (36%), Positives = 21/58 (36%)
 Frame = +1

Query: 256 PGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEPHQAADLHGGGDEDDRLQGQDG 429
           PG      G S G   P   R  PGG P  G AG          GG D   R QG  G
Sbjct: 214 PGNNPFTSGGSTGMARPQAPR--PGGAPRPGGAGAPGGPRPQGAGGQDRAPRPQGGPG 269



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>EMP1_ORYSA (P46520) Embryonic abundant protein 1|
          Length = 95

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 24/76 (31%), Positives = 33/76 (43%)
 Frame = +1

Query: 196 QAGDLVLRRVAAGEHGEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEPHQA 375
           Q G   L R+A    G+ VVPGG    GG+S  A   +   R  GG   +   G+E ++ 
Sbjct: 7   QQGRSELDRMA--REGQTVVPGGT---GGKSLEAQENLAEGRSRGGQTRKEQMGEEGYRE 61

Query: 376 ADLHGGGDEDDRLQGQ 423
               GG    D   G+
Sbjct: 62  MGRKGGLSTGDESGGE 77



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>EM2_WHEAT (P22701) Em protein CS41|
          Length = 94

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 24/80 (30%), Positives = 34/80 (42%)
 Frame = +1

Query: 184 AQGCQAGDLVLRRVAAGEHGEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQE 363
           A G + G   L  +A    G+ VVPGG    GG+S  A   +   R  GG   +   G+E
Sbjct: 2   ASGQEKGRSELDSLA--REGQTVVPGGT---GGKSYEAQEKLAEGRSRGGQTRKEQMGEE 56

Query: 364 PHQAADLHGGGDEDDRLQGQ 423
            +      GG   +D   G+
Sbjct: 57  GYSEMGRKGGLSTNDESGGE 76



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>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1459

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 25/71 (35%), Positives = 27/71 (38%)
 Frame = +1

Query: 220 RVAAGEHGEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEPHQAADLHGGGD 399
           R A GE GE   PG     G        P     QPG   DQG+AGQ+    A    G  
Sbjct: 790 RGAPGEPGETGPPGPAGFAG--------PPGADGQPGAKGDQGEAGQKGDAGAPGPQGPS 841

Query: 400 EDDRLQGQDGV 432
                QG  GV
Sbjct: 842 GAPGPQGPTGV 852



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>SOX10_HUMAN (P56693) Transcription factor SOX-10|
          Length = 466

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = +1

Query: 217 RRVAAGEHGEDVVPGGEAVQGGESR-GAHHPVRY--RRQPGGVPDQGDAGQEPHQAADLH 387
           R+      GE   PGGEA QGG +   AH+   +   R PG      D G   H +   H
Sbjct: 178 RKNGKAAQGEAECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSD-GNPEHPSGQSH 236

Query: 388 G 390
           G
Sbjct: 237 G 237



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>EM1_WHEAT (P04568) Em protein|
          Length = 93

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 20/60 (33%), Positives = 26/60 (43%)
 Frame = +1

Query: 241 GEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEPHQAADLHGGGDEDDRLQG 420
           GE VVPGG    GG+S  A   +   R  GG   +   G+E +      GG   +D   G
Sbjct: 18  GETVVPGGT---GGKSLEAQENLAEGRSRGGQTRREQMGEEGYSQMGRKGGLSTNDESGG 74



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>SODC_HORSE (P00443) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)|
          Length = 153

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
 Frame = +1

Query: 196 QAGDLVLRR----VAAGEHGEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQE 363
           + G +VL+     +  G+HG  V   G+  QG  + GAH     ++  G   ++   G  
Sbjct: 25  EGGPVVLKGFIEGLTKGDHGFHVHEFGDNTQGCTTAGAHFNPLSKKHGGPKDEERHVGDL 84

Query: 364 PHQAADLHGGGDED 405
            +  AD +G  D D
Sbjct: 85  GNVTADENGKADVD 98



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>ALGE4_AZOVI (Q44493) Poly(beta-D-mannuronate) C5 epimerase 4 (EC 5.1.3.-)|
           (Mannuronan epimerase 4)
          Length = 553

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 322 QPGGVPDQGDAGQEPHQAADLHGGGDEDDRLQGQDG 429
           +PG  P Q   G +         GGD DD+LQG  G
Sbjct: 376 EPGATPQQPSTGSDGEPLV----GGDTDDQLQGGSG 407



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>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor|
          Length = 1355

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
 Frame = +1

Query: 232  GEHGEDVVPGGEAVQG-------GESRGAHHPVRYRRQPGGVPDQGDAGQEPHQAADLHG 390
            G  GE  +PGG    G         S G   P      PG V   G+AG++ H   D   
Sbjct: 868  GTRGERGLPGGPGSNGEPGPSGLAGSSGPRGPPGSVGSPGPVGHSGEAGRDGHPGNDGPP 927

Query: 391  GGDEDDRLQGQDG 429
            G D     +G+ G
Sbjct: 928  GRDGLPGAKGERG 940



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>IR09_HCMVA (P16807) Hypothetical protein IRL9 (TRL9)|
          Length = 143

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 22/70 (31%), Positives = 31/70 (44%)
 Frame = +1

Query: 217 RRVAAGEHGEDVVPGGEAVQGGESRGAHHPVRYRRQPGGVPDQGDAGQEPHQAADLHGGG 396
           RR   G  G+    G EA +            YR+ PG + ++   GQ+P    D +G  
Sbjct: 75  RRSGRGPVGD----GREASRTAAEEKRRRKENYRQGPGFLLEKQHVGQDP----DANGNH 126

Query: 397 DEDDRLQGQD 426
           D+DD   GQD
Sbjct: 127 DDDDH-AGQD 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.138    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,510,385
Number of Sequences: 219361
Number of extensions: 796381
Number of successful extensions: 2695
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2675
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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