| Clone Name | baet132c04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY188797.1| Oryza sativa (indica cultivar-group) sedoheptulose-1,7-bisphosphatase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1566 Score = 507 bits (256), Expect = e-140 Identities = 375/414 (90%), Gaps = 3/414 (0%) Strand = Plus / Plus Query: 92 atggagaccgtcgcggccgccggctacgcgcgcggggccgccacgcgctccccggcctgc 151 |||||||| || || || ||| ||||| | |||||||| || |||||||| || || ||| Sbjct: 151 atggagacggtggccgcggccagctacacccgcggggcggcgacgcgctcgccagcgtgc 210 Query: 152 tgcgccgccatgtccttctcgcagtcctacaggcccaaggctgccaggccggcgacctcg 211 ||||||||||||||||||||||||||||||||||||||||| || || ||| ||| | || Sbjct: 211 tgcgccgccatgtccttctcgcagtcctacaggcccaaggccgctagaccgccgagcacg 270 Query: 212 ttctacggcgagtcgctgcgggcgaacacggcgaggacgtcgttcccggcggggaggcag 271 |||||||||||||||||||||| |||||||||||| ||| | ||| | ||||||||| Sbjct: 271 ttctacggcgagtcgctgcgggttaacacggcgagg---tcgctgccgtctgggaggcag 327 Query: 272 tccaaggcggcgagtcgcgcggcgctcaccacccggtgcgctatcggcgacagcctggag 331 |||||||||||||| || |||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 328 tccaaggcggcgagccgggcggcgctcagcacccggtgcgagatcggggacagcctggag 387 Query: 332 gagttcctgaccaaggcgacgccggacaagaacctcatcaggctgctgatctgcatgggg 391 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 388 gagttcctgaccaaggcgacgccggacaagaacctcatcaggctgctcatctgcatgggg 447 Query: 392 gaggcgatgaggacgatcgccttcaaggtcaggacggcgtcctgcggcggcaccgcctgc 451 |||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| Sbjct: 448 gaggcgatgaggacgatctcgttcaaggtcaggacggcgtcgtgcggcggcaccgcctgc 507 Query: 452 gtcaactccttcggcgacgagcagctcgccgtcgacatgctcgccgacaagctc 505 |||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 508 gtcaactccttcggtgacgagcagctcgccgtcgatatgctcgccgacaagctc 561
>ref|XM_475043.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1179 Score = 500 bits (252), Expect = e-138 Identities = 374/414 (90%), Gaps = 3/414 (0%) Strand = Plus / Plus Query: 92 atggagaccgtcgcggccgccggctacgcgcgcggggccgccacgcgctccccggcctgc 151 |||||||| || || || ||| ||||| | |||||||| || |||||||| || || ||| Sbjct: 1 atggagacggtggccgcggccagctacacccgcggggcggcgacgcgctcgccagcgtgc 60 Query: 152 tgcgccgccatgtccttctcgcagtcctacaggcccaaggctgccaggccggcgacctcg 211 ||||||||||||||||||||||||||||||||||||||||| || || ||| ||| | || Sbjct: 61 tgcgccgccatgtccttctcgcagtcctacaggcccaaggccgctagaccgccgagcacg 120 Query: 212 ttctacggcgagtcgctgcgggcgaacacggcgaggacgtcgttcccggcggggaggcag 271 |||||||||||||||||||||| |||||||||||| ||| | ||| | ||||||||| Sbjct: 121 ttctacggcgagtcgctgcgggttaacacggcgagg---tcgctgccgtctgggaggcag 177 Query: 272 tccaaggcggcgagtcgcgcggcgctcaccacccggtgcgctatcggcgacagcctggag 331 |||||||||||||| || |||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 178 tccaaggcggcgagccgggcggcgctcagcacccggtgcgagatcggggacagcctggag 237 Query: 332 gagttcctgaccaaggcgacgccggacaagaacctcatcaggctgctgatctgcatgggg 391 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 238 gagttcctgaccaaggcgacgccggataagaacctcatcaggctgctcatctgcatgggg 297 Query: 392 gaggcgatgaggacgatcgccttcaaggtcaggacggcgtcctgcggcggcaccgcctgc 451 |||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| Sbjct: 298 gaggcgatgaggacgatctcgttcaaggtcaggacggcgtcgtgcggcggcaccgcctgc 357 Query: 452 gtcaactccttcggcgacgagcagctcgccgtcgacatgctcgccgacaagctc 505 |||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 358 gtcaactccttcggtgacgagcagctcgccgtcgatatgctcgccgacaagctc 411
>dbj|AK119209.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E03, full insert sequence Length = 1605 Score = 500 bits (252), Expect = e-138 Identities = 374/414 (90%), Gaps = 3/414 (0%) Strand = Plus / Plus Query: 92 atggagaccgtcgcggccgccggctacgcgcgcggggccgccacgcgctccccggcctgc 151 |||||||| || || || ||| ||||| | |||||||| || |||||||| || || ||| Sbjct: 217 atggagacggtggccgcggccagctacacccgcggggcggcgacgcgctcgccagcgtgc 276 Query: 152 tgcgccgccatgtccttctcgcagtcctacaggcccaaggctgccaggccggcgacctcg 211 ||||||||||||||||||||||||||||||||||||||||| || || ||| ||| | || Sbjct: 277 tgcgccgccatgtccttctcgcagtcctacaggcccaaggccgctagaccgccgagcacg 336 Query: 212 ttctacggcgagtcgctgcgggcgaacacggcgaggacgtcgttcccggcggggaggcag 271 |||||||||||||||||||||| |||||||||||| ||| | ||| | ||||||||| Sbjct: 337 ttctacggcgagtcgctgcgggttaacacggcgagg---tcgctgccgtctgggaggcag 393 Query: 272 tccaaggcggcgagtcgcgcggcgctcaccacccggtgcgctatcggcgacagcctggag 331 |||||||||||||| || |||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 394 tccaaggcggcgagccgggcggcgctcagcacccggtgcgagatcggggacagcctggag 453 Query: 332 gagttcctgaccaaggcgacgccggacaagaacctcatcaggctgctgatctgcatgggg 391 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 454 gagttcctgaccaaggcgacgccggataagaacctcatcaggctgctcatctgcatgggg 513 Query: 392 gaggcgatgaggacgatcgccttcaaggtcaggacggcgtcctgcggcggcaccgcctgc 451 |||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| Sbjct: 514 gaggcgatgaggacgatctcgttcaaggtcaggacggcgtcgtgcggcggcaccgcctgc 573 Query: 452 gtcaactccttcggcgacgagcagctcgccgtcgacatgctcgccgacaagctc 505 |||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 574 gtcaactccttcggtgacgagcagctcgccgtcgatatgctcgccgacaagctc 627
>dbj|AK062081.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F10, full insert sequence Length = 1454 Score = 500 bits (252), Expect = e-138 Identities = 374/414 (90%), Gaps = 3/414 (0%) Strand = Plus / Plus Query: 92 atggagaccgtcgcggccgccggctacgcgcgcggggccgccacgcgctccccggcctgc 151 |||||||| || || || ||| ||||| | |||||||| || |||||||| || || ||| Sbjct: 129 atggagacggtggccgcggccagctacacccgcggggcggcgacgcgctcgccagcgtgc 188 Query: 152 tgcgccgccatgtccttctcgcagtcctacaggcccaaggctgccaggccggcgacctcg 211 ||||||||||||||||||||||||||||||||||||||||| || || ||| ||| | || Sbjct: 189 tgcgccgccatgtccttctcgcagtcctacaggcccaaggccgctagaccgccgagcacg 248 Query: 212 ttctacggcgagtcgctgcgggcgaacacggcgaggacgtcgttcccggcggggaggcag 271 |||||||||||||||||||||| |||||||||||| ||| | ||| | ||||||||| Sbjct: 249 ttctacggcgagtcgctgcgggttaacacggcgagg---tcgctgccgtctgggaggcag 305 Query: 272 tccaaggcggcgagtcgcgcggcgctcaccacccggtgcgctatcggcgacagcctggag 331 |||||||||||||| || |||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 306 tccaaggcggcgagccgggcggcgctcagcacccggtgcgagatcggggacagcctggag 365 Query: 332 gagttcctgaccaaggcgacgccggacaagaacctcatcaggctgctgatctgcatgggg 391 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 366 gagttcctgaccaaggcgacgccggataagaacctcatcaggctgctcatctgcatgggg 425 Query: 392 gaggcgatgaggacgatcgccttcaaggtcaggacggcgtcctgcggcggcaccgcctgc 451 |||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| Sbjct: 426 gaggcgatgaggacgatctcgttcaaggtcaggacggcgtcgtgcggcggcaccgcctgc 485 Query: 452 gtcaactccttcggcgacgagcagctcgccgtcgacatgctcgccgacaagctc 505 |||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 486 gtcaactccttcggtgacgagcagctcgccgtcgatatgctcgccgacaagctc 539
>dbj|AK065773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039M24, full insert sequence Length = 1541 Score = 492 bits (248), Expect = e-136 Identities = 373/414 (90%), Gaps = 3/414 (0%) Strand = Plus / Plus Query: 92 atggagaccgtcgcggccgccggctacgcgcgcggggccgccacgcgctccccggcctgc 151 |||||||| || || || ||| ||||| | |||||||| || |||||||| || || ||| Sbjct: 62 atggagacggtggccgcggccagctacacccgcggggcggcgacgcgctcgccagcgtgc 121 Query: 152 tgcgccgccatgtccttctcgcagtcctacaggcccaaggctgccaggccggcgacctcg 211 ||||||||||||||||||||||||||||||||||||||||| || || ||| ||| | || Sbjct: 122 tgcgccgccatgtccttctcgcagtcctacaggcccaaggccgctagaccgccgagcacg 181 Query: 212 ttctacggcgagtcgctgcgggcgaacacggcgaggacgtcgttcccggcggggaggcag 271 |||||||||||||||||||||| |||||||||||| ||| | ||| | ||||||||| Sbjct: 182 ttctacggcgagtcgctgcgggttaacacggcgagg---tcgctgccgtctgggaggcag 238 Query: 272 tccaaggcggcgagtcgcgcggcgctcaccacccggtgcgctatcggcgacagcctggag 331 |||||||||||||| || |||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 239 tccaaggcggcgagccgggcggcgctcagcacccggtgcgagatcggggacagcctggag 298 Query: 332 gagttcctgaccaaggcgacgccggacaagaacctcatcaggctgctgatctgcatgggg 391 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 299 gagttcctgaccaaggcgacgccggataagaacctcatcaggctgctcatctgcatgggg 358 Query: 392 gaggcgatgaggacgatcgccttcaaggtcaggacggcgtcctgcggcggcaccgcctgc 451 |||||||||||||||||| | |||||||||||||||||||| |||||||||||||| ||| Sbjct: 359 gaggcgatgaggacgatctcgttcaaggtcaggacggcgtcgtgcggcggcaccgcatgc 418 Query: 452 gtcaactccttcggcgacgagcagctcgccgtcgacatgctcgccgacaagctc 505 |||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 419 gtcaactccttcggtgacgagcagctcgccgtcgatatgctcgccgacaagctc 472
>emb|X65540.1|TASH17BP T.aestivum gene for sedoheptulose-1,7-bisphoshatase Length = 3143 Score = 329 bits (166), Expect = 5e-87 Identities = 175/178 (98%) Strand = Plus / Plus Query: 328 ggaggagttcctgaccaaggcgacgccggacaagaacctcatcaggctgctgatctgcat 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 ggaggagttcctgaccaaggcgacgccggacaagaacctcatcaggctgctgatctgcat 503 Query: 388 gggggaggcgatgaggacgatcgccttcaaggtcaggacggcgtcctgcggcggcaccgc 447 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| || Sbjct: 504 gggggaggcgatgaggacgatcgccttcaaggtccggacggcctcctgcggcggcacggc 563 Query: 448 ctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctcgccgacaagctc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctcgccgacaagctc 621 Score = 232 bits (117), Expect = 9e-58 Identities = 135/141 (95%) Strand = Plus / Plus Query: 189 aggctgccaggccggcgacctcgttctacggcgagtcgctgcgggcgaacacggcgagga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggctgccaggccggcgacctcgttctacggcgagtcgctgcgggcgaacacggcgagga 242 Query: 249 cgtcgttcccggcggggaggcagtccaaggcggcgagtcgcgcggcgctcaccacccggt 308 ||||||||||||||||| |||||||||||||||| || || ||||||||||||||||| | Sbjct: 243 cgtcgttcccggcggggcggcagtccaaggcggccagccgggcggcgctcaccacccgct 302 Query: 309 gcgctatcggcgacagcctgg 329 |||| |||||||||||||||| Sbjct: 303 gcgcgatcggcgacagcctgg 323 Score = 182 bits (92), Expect = 7e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 92 atggagaccgtcgcggccgccggctacgcgcgcggggccgccacgcgctccccggcctgc 151 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 1 atggagaccgtcgcggccgccggctacgcgcacggggccgccacgcgctccccggcgtgc 60 Query: 152 tgcgccgccatgtccttctcgcagtcctacaggcccaagg 191 |||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tgcgccgccatgtccttctcgcagtcctacaggcccaagg 100
>gb|AY188798.1| Oryza sativa (indica cultivar-group) sedoheptulose-1,7-bisphosphatase precursor, gene, complete cds; nuclear gene for chloroplast product Length = 2594 Score = 305 bits (154), Expect = 7e-80 Identities = 172/178 (96%) Strand = Plus / Plus Query: 328 ggaggagttcctgaccaaggcgacgccggacaagaacctcatcaggctgctgatctgcat 387 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 577 ggaggagttcctgaccaaggcgacgccggacaagaacctcatcaggctgctcatctgcat 636 Query: 388 gggggaggcgatgaggacgatcgccttcaaggtcaggacggcgtcctgcggcggcaccgc 447 |||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||| Sbjct: 637 gggggaggcgatgaggacgatctcgttcaaggtcaggacggcgtcgtgcggcggcaccgc 696 Query: 448 ctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctcgccgacaagctc 505 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 697 ctgcgtcaactccttcggtgacgagcagctcgccgtcgatatgctcgccgacaagctc 754 Score = 115 bits (58), Expect = 1e-22 Identities = 105/120 (87%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 210 cgttctacggcgagtcgctgcgggcgaacacggcgaggacgtcgttcccggcggggaggc 269 |||||||||||||||||||||||| |||||||||||| ||| | ||| | ||||||| Sbjct: 366 cgttctacggcgagtcgctgcgggttaacacggcgagg---tcgctgccgtctgggaggc 422 Query: 270 agtccaaggcggcgagtcgcgcggcgctcaccacccggtgcgctatcggcgacagcctgg 329 |||||||||||||||| || |||||||||| ||||||||||| ||||| |||||||||| Sbjct: 423 agtccaaggcggcgagccgggcggcgctcagcacccggtgcgagatcggggacagcctgg 482 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 92 atggagaccgtcgcggccgccggctacgcgcgcggggccgccacgcgctccccggcctgc 151 |||||||| || || || ||| ||||| | |||||||| || |||||||| || || ||| Sbjct: 151 atggagacggtggccgcggccagctacacccgcggggcggcgacgcgctcgccagcgtgc 210 Query: 152 tgcgccgccatgtccttctcgcagtcctacaggcccaagg 191 |||||||||||||||||||||||||||||||||||||||| Sbjct: 211 tgcgccgccatgtccttctcgcagtcctacaggcccaagg 250
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 297 bits (150), Expect = 2e-77 Identities = 171/178 (96%) Strand = Plus / Minus Query: 328 ggaggagttcctgaccaaggcgacgccggacaagaacctcatcaggctgctgatctgcat 387 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 119949 ggaggagttcctgaccaaggcgacgccggataagaacctcatcaggctgctcatctgcat 119890 Query: 388 gggggaggcgatgaggacgatcgccttcaaggtcaggacggcgtcctgcggcggcaccgc 447 |||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||| Sbjct: 119889 gggggaggcgatgaggacgatctcgttcaaggtcaggacggcgtcgtgcggcggcaccgc 119830 Query: 448 ctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctcgccgacaagctc 505 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 119829 ctgcgtcaactccttcggtgacgagcagctcgccgtcgatatgctcgccgacaagctc 119772 Score = 115 bits (58), Expect = 1e-22 Identities = 105/120 (87%), Gaps = 3/120 (2%) Strand = Plus / Minus Query: 210 cgttctacggcgagtcgctgcgggcgaacacggcgaggacgtcgttcccggcggggaggc 269 |||||||||||||||||||||||| |||||||||||| ||| | ||| | ||||||| Sbjct: 120160 cgttctacggcgagtcgctgcgggttaacacggcgagg---tcgctgccgtctgggaggc 120104 Query: 270 agtccaaggcggcgagtcgcgcggcgctcaccacccggtgcgctatcggcgacagcctgg 329 |||||||||||||||| || |||||||||| ||||||||||| ||||| |||||||||| Sbjct: 120103 agtccaaggcggcgagccgggcggcgctcagcacccggtgcgagatcggggacagcctgg 120044 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 92 atggagaccgtcgcggccgccggctacgcgcgcggggccgccacgcgctccccggcctgc 151 |||||||| || || || ||| ||||| | |||||||| || |||||||| || || ||| Sbjct: 120375 atggagacggtggccgcggccagctacacccgcggggcggcgacgcgctcgccagcgtgc 120316 Query: 152 tgcgccgccatgtccttctcgcagtcctacaggcccaagg 191 |||||||||||||||||||||||||||||||||||||||| Sbjct: 120315 tgcgccgccatgtccttctcgcagtcctacaggcccaagg 120276
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 297 bits (150), Expect = 2e-77 Identities = 171/178 (96%) Strand = Plus / Minus Query: 328 ggaggagttcctgaccaaggcgacgccggacaagaacctcatcaggctgctgatctgcat 387 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 9035215 ggaggagttcctgaccaaggcgacgccggataagaacctcatcaggctgctcatctgcat 9035156 Query: 388 gggggaggcgatgaggacgatcgccttcaaggtcaggacggcgtcctgcggcggcaccgc 447 |||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||| Sbjct: 9035155 gggggaggcgatgaggacgatctcgttcaaggtcaggacggcgtcgtgcggcggcaccgc 9035096 Query: 448 ctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctcgccgacaagctc 505 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 9035095 ctgcgtcaactccttcggtgacgagcagctcgccgtcgatatgctcgccgacaagctc 9035038 Score = 115 bits (58), Expect = 1e-22 Identities = 105/120 (87%), Gaps = 3/120 (2%) Strand = Plus / Minus Query: 210 cgttctacggcgagtcgctgcgggcgaacacggcgaggacgtcgttcccggcggggaggc 269 |||||||||||||||||||||||| |||||||||||| ||| | ||| | ||||||| Sbjct: 9035426 cgttctacggcgagtcgctgcgggttaacacggcgagg---tcgctgccgtctgggaggc 9035370 Query: 270 agtccaaggcggcgagtcgcgcggcgctcaccacccggtgcgctatcggcgacagcctgg 329 |||||||||||||||| || |||||||||| ||||||||||| ||||| |||||||||| Sbjct: 9035369 agtccaaggcggcgagccgggcggcgctcagcacccggtgcgagatcggggacagcctgg 9035310 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 92 atggagaccgtcgcggccgccggctacgcgcgcggggccgccacgcgctccccggcctgc 151 |||||||| || || || ||| ||||| | |||||||| || |||||||| || || ||| Sbjct: 9035641 atggagacggtggccgcggccagctacacccgcggggcggcgacgcgctcgccagcgtgc 9035582 Query: 152 tgcgccgccatgtccttctcgcagtcctacaggcccaagg 191 |||||||||||||||||||||||||||||||||||||||| Sbjct: 9035581 tgcgccgccatgtccttctcgcagtcctacaggcccaagg 9035542
>dbj|AB035313.1| Chlamydomonas sp. W80 sbp-1 mRNA for sedoheptulose-1,7-bisphosphatase, complete cds Length = 1361 Score = 89.7 bits (45), Expect = 8e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 415 caaggtcaggacggcgtcctgcggcggcaccgcctgcgtcaactccttcggcgacgagca 474 ||||||| | || ||||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 294 caaggtccgcaccgcgtcgtgcggcggcaccgcgtgcgtgaactcgttcggcgacgagca 353 Query: 475 gctcgccgtcgacatgctcgccgac 499 ||| |||||||||||| | |||||| Sbjct: 354 gctggccgtcgacatggtggccgac 378
>gb|AY123067.1| Griffithsia japonica sedoheptulose-1,7-bisphosphatase mRNA, partial cds Length = 594 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 446 gcctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctcgccgacaag 502 |||||| ||||| |||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 304 gcctgcttcaacgacttcggcgacgagcagctcgccatcgacgtgctcgccgacaag 360
>emb|Y14608.1|CRCSBPGEN Chlamydomonas reinhardtii Csbp gene Length = 4222 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 434 tgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctc 493 |||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||||||| | Sbjct: 2019 tgcgccggtaccgcctgcgtgaacagcttcggcgatgagcagctggccgtcgacatggtg 2078 Query: 494 gccgacaagct 504 || |||||||| Sbjct: 2079 gctgacaagct 2089
>gb|S63737.1| sedoheptulose-1,7-bisphosphatase {5' region} [Triticum aestivum=wheat, Genomic, 493 nt] Length = 493 Score = 61.9 bits (31), Expect = 2e-06 Identities = 51/55 (92%), Gaps = 2/55 (3%) Strand = Plus / Plus Query: 34 aagctccgtagcctccct-cctcgtcagcgccggccaagaccacgcaccgccagc 87 ||||||||||||||| || ||||||||||||||||| ||||||||||||| |||| Sbjct: 403 aagctccgtagcctctcttcctcgtcagcgccggcc-agaccacgcaccggcagc 456 Score = 46.1 bits (23), Expect = 0.11 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 82 gccagcagc-aatggagaccgtcgcggccgc 111 ||||||||| ||||||||||||||||||||| Sbjct: 463 gccagcagctaatggagaccgtcgcggccgc 493
>emb|X74418.1|CRCSBP C.reinhardtii csbp mRNA for sedoheptulose-bisphosphatas Length = 1610 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 434 tgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctc 493 |||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||||||| | Sbjct: 348 tgcgccggtaccgcctgcgtgaacagcttcggcgatgagcagctggccgtcgacatggtg 407 Query: 494 gccgacaagct 504 || |||||||| Sbjct: 408 gctgacaagct 418
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 435 gcggcggcaccgcctgcgtcaact 458 |||||||||||||||||||||||| Sbjct: 410944 gcggcggcaccgcctgcgtcaact 410967
>ref|NM_210888.1| Eremothecium gossypii AFL014Cp (AFL014C), mRNA Length = 1674 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 435 gcggcggcaccgcctgcgtcaact 458 |||||||||||||||||||||||| Sbjct: 226 gcggcggcaccgcctgcgtcaact 203
>emb|AJ341533.1|HSA341533 Homo sapiens genomic sequence surrounding NotI site, clone NR3-BO22RS Length = 721 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 tcgcgcggcgctcaccacccgg 307 |||||||||||||||||||||| Sbjct: 53 tcgcgcggcgctcaccacccgg 32
>emb|AJ341458.1|HSA341458 Homo sapiens genomic sequence surrounding NotI site, clone NR1-IA2RS Length = 630 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 tcgcgcggcgctcaccacccgg 307 |||||||||||||||||||||| Sbjct: 53 tcgcgcggcgctcaccacccgg 32
>emb|AJ337730.1|HSA337730 Homo sapiens genomic sequence surrounding NotI site, clone NL6-LA6RS Length = 722 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 tcgcgcggcgctcaccacccgg 307 |||||||||||||||||||||| Sbjct: 53 tcgcgcggcgctcaccacccgg 32
>emb|AJ341177.1|HSA341177 Homo sapiens genomic sequence surrounding NotI site, clone NR1-QB7RS Length = 622 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 tcgcgcggcgctcaccacccgg 307 |||||||||||||||||||||| Sbjct: 53 tcgcgcggcgctcaccacccgg 32
>emb|AJ341162.1|HSA341162 Homo sapiens genomic sequence surrounding NotI site, clone NR1-QB1RS Length = 601 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 tcgcgcggcgctcaccacccgg 307 |||||||||||||||||||||| Sbjct: 53 tcgcgcggcgctcaccacccgg 32
>dbj|AP000757.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-728F11, complete sequences Length = 184926 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 tcgcgcggcgctcaccacccgg 307 |||||||||||||||||||||| Sbjct: 41759 tcgcgcggcgctcaccacccgg 41738
>dbj|AP001554.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-35P15, complete sequence Length = 171747 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 tcgcgcggcgctcaccacccgg 307 |||||||||||||||||||||| Sbjct: 150430 tcgcgcggcgctcaccacccgg 150409
>ref|XM_463740.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 888 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 457 ctccttcggcgacgagcagctcgcc 481 ||||||||||| ||||||||||||| Sbjct: 462 ctccttcggcgtcgagcagctcgcc 486
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 457 ctccttcggcgacgagcagctcgcc 481 ||||||||||| ||||||||||||| Sbjct: 76712 ctccttcggcgtcgagcagctcgcc 76736
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 457 ctccttcggcgacgagcagctcgcc 481 ||||||||||| ||||||||||||| Sbjct: 6551 ctccttcggcgtcgagcagctcgcc 6575
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 cggccgccggctacgcgcgcg 125 ||||||||||||||||||||| Sbjct: 121427 cggccgccggctacgcgcgcg 121407
>emb|AL138721.16| Human DNA sequence from clone RP11-174N3 on chromosome 6 Contains the 3' end of gene KIAA0229 for a novel Ank, SAM (Sterile alpha motif) and Phosphotyrosine interaction (PTB/PID) domain containing protein, the TCP11 gene for t-complex 11 (mouse) and two CpG islands, complete sequence Length = 155539 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 caggcccaaggctgccaggcc 201 ||||||||||||||||||||| Sbjct: 38695 caggcccaaggctgccaggcc 38675
>emb|X02218.1|GGHIS1 Chicken duplicated genes for histone H2A, H4 and a histone H3 gene Length = 8384 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 cgcgcgcggggccgccacgcg 138 ||||||||||||||||||||| Sbjct: 5681 cgcgcgcggggccgccacgcg 5661
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 457 ctccttcggcgacgagcagctcgcc 481 ||||||||||| ||||||||||||| Sbjct: 1869164 ctccttcggcgtcgagcagctcgcc 1869188
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 457 ctccttcggcgacgagcagctcgcc 481 ||||||||||| ||||||||||||| Sbjct: 1934996 ctccttcggcgtcgagcagctcgcc 1935020
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 457 ctccttcggcgacgagcagctcgcc 481 ||||||||||| ||||||||||||| Sbjct: 10614253 ctccttcggcgtcgagcagctcgcc 10614229
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 457 ctccttcggcgacgagcagctcgcc 481 ||||||||||| ||||||||||||| Sbjct: 41848137 ctccttcggcgtcgagcagctcgcc 41848113
>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147A04 Length = 150053 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 457 ctccttcggcgacgagcagctcgcc 481 ||||||||||| ||||||||||||| Sbjct: 91513 ctccttcggcgtcgagcagctcgcc 91489
>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F05 Length = 134247 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 457 ctccttcggcgacgagcagctcgcc 481 ||||||||||| ||||||||||||| Sbjct: 41893 ctccttcggcgtcgagcagctcgcc 41869
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 457 ctccttcggcgacgagcagctcgcc 481 ||||||||||| ||||||||||||| Sbjct: 1942777 ctccttcggcgtcgagcagctcgcc 1942801
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 457 ctccttcggcgacgagcagctcgcc 481 ||||||||||| ||||||||||||| Sbjct: 1869115 ctccttcggcgtcgagcagctcgcc 1869139
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 457 ctccttcggcgacgagcagctcgcc 481 ||||||||||| ||||||||||||| Sbjct: 63882 ctccttcggcgtcgagcagctcgcc 63906
>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107247 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 457 ctccttcggcgacgagcagctcgcc 481 ||||||||||| ||||||||||||| Sbjct: 99057 ctccttcggcgtcgagcagctcgcc 99033
>ref|NM_125142.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT5G57610 mRNA, complete cds Length = 3413 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 caagaacctcatcaggctgctgat 381 ||||| |||||||||||||||||| Sbjct: 262 caagatcctcatcaggctgctgat 239
>ref|NM_195283.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0040E17.29), mRNA Length = 1764 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ccgccggctacgcgcgcggg 127 |||||||||||||||||||| Sbjct: 83 ccgccggctacgcgcgcggg 102
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gacatgctcgccgacaagct 504 |||||||||||||||||||| Sbjct: 266915 gacatgctcgccgacaagct 266896
>ref|XM_870935.1| PREDICTED: Bos taurus similar to unc-51-like kinase 2 (LOC618601), partial mRNA Length = 745 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cccaaggctgccaggccggc 204 |||||||||||||||||||| Sbjct: 620 cccaaggctgccaggccggc 601
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 cggcgaggacgtcgttcccg 259 |||||||||||||||||||| Sbjct: 1322861 cggcgaggacgtcgttcccg 1322880
>gb|AC129775.4| Mus musculus BAC clone RP23-174N20 from chromosome 3, complete sequence Length = 225505 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tcctacaggcccaaggctgc 195 |||||||||||||||||||| Sbjct: 11349 tcctacaggcccaaggctgc 11368
>gb|AE009074.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 100 of 256 of the complete sequence Length = 11787 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gttcctgaccaaggcgacgc 353 |||||||||||||||||||| Sbjct: 8666 gttcctgaccaaggcgacgc 8647
>gb|AC164581.7| Mus musculus 10 BAC RP23-45O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199422 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 381 tctgcatgggggaggcgatgagga 404 |||||||||||||||| ||||||| Sbjct: 30159 tctgcatgggggaggcaatgagga 30136
>gb|AY454519.1| Mus musculus cell-line 1EJ4 ANA immunoglobulin heavy chain variable region gene, partial cds Length = 391 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcaggctgctgatctgcatg 388 |||||||||||||||||||| Sbjct: 250 tcaggctgctgatctgcatg 231
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 ggccgccacgcgctccccggcctg 150 |||| ||||||||||||||||||| Sbjct: 650217 ggccaccacgcgctccccggcctg 650240
>ref|XM_384951.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG04775.1) partial mRNA Length = 1026 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccctcctcgtcagcgcc 64 |||||||||||||||||||| Sbjct: 503 cctccctcctcgtcagcgcc 484
>gb|AC124177.2| Mus musculus BAC clone RP23-193C10 from 3, complete sequence Length = 217266 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tcctacaggcccaaggctgc 195 |||||||||||||||||||| Sbjct: 8881 tcctacaggcccaaggctgc 8862
>ref|XM_949403.1| Theileria annulata strain Ankara ubiquitin-protein ligase 1 (TA19515) partial mRNA Length = 13257 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ccgcctgcgtcaactccttc 463 |||||||||||||||||||| Sbjct: 12314 ccgcctgcgtcaactccttc 12295
>gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 genomic sequence, complete sequence Length = 151673 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 ccgccggctacgcgcgcggg 127 |||||||||||||||||||| Sbjct: 128257 ccgccggctacgcgcgcggg 128238
>gb|AE011665.1| Xanthomonas axonopodis pv. citri str. 306, section 43 of 469 of the complete genome Length = 10257 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ccccggcctgctgcgccgcc 160 |||||||||||||||||||| Sbjct: 2703 ccccggcctgctgcgccgcc 2722
>gb|AF499777.1| Xanthomonas axonopodis pv. glycines strain 8ra hrp pathogenicity island, complete sequence Length = 29206 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ccccggcctgctgcgccgcc 160 |||||||||||||||||||| Sbjct: 28026 ccccggcctgctgcgccgcc 28007
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gttcctgaccaaggcgacgc 353 |||||||||||||||||||| Sbjct: 1103205 gttcctgaccaaggcgacgc 1103186
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gtagcctccctcctcgtcag 60 |||||||||||||||||||| Sbjct: 1232774 gtagcctccctcctcgtcag 1232793
>gb|AF303872.1|AF303872 Mus musculus clone J558.41 immunoglobulin heavy chain variable region mRNA, partial cds Length = 294 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcaggctgctgatctgcatg 388 |||||||||||||||||||| Sbjct: 259 tcaggctgctgatctgcatg 240
>gb|AF124720.1|AF124720 Mus musculus immunoglobulin heavy chain mRNA, partial cds Length = 411 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcaggctgctgatctgcatg 388 |||||||||||||||||||| Sbjct: 316 tcaggctgctgatctgcatg 297
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ccgccggctacgcgcgcggg 127 |||||||||||||||||||| Sbjct: 5938056 ccgccggctacgcgcgcggg 5938075
>gb|AF328128.1|AF328128 Mus musculus clone 41ab07c immunoglobulin heavy chain VDJ region gene, partial cds Length = 309 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcaggctgctgatctgcatg 388 |||||||||||||||||||| Sbjct: 239 tcaggctgctgatctgcatg 220
>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic gene cluster, partial sequence Length = 127559 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gcgtcctgcggcggcaccgc 447 |||||||||||||||||||| Sbjct: 107782 gcgtcctgcggcggcaccgc 107763
>gb|AC016712.6| Homo sapiens BAC clone RP11-266F17 from 2, complete sequence Length = 159748 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cagctcccacaatcccaagc 37 |||||||||||||||||||| Sbjct: 41265 cagctcccacaatcccaagc 41284
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gcgcgcggggccgccacgcg 138 |||||||||||||||||||| Sbjct: 3886990 gcgcgcggggccgccacgcg 3886971 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 acggcgtcctgcggcggcaccgcc 448 ||||||||| |||||||||||||| Sbjct: 3091194 acggcgtccagcggcggcaccgcc 3091217
>gb|AY878015.1| Mus musculus clone 12-1-6 immunoglobulin heavy chain (Igh) mRNA, partial cds Length = 163 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcaggctgctgatctgcatg 388 |||||||||||||||||||| Sbjct: 62 tcaggctgctgatctgcatg 43
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 caagaacctcatcaggctgctgat 381 ||||| |||||||||||||||||| Sbjct: 56509 caagatcctcatcaggctgctgat 56486
>gb|AC153816.4| Mus musculus BAC RP23-8N6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217283 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 381 tctgcatgggggaggcgatgagga 404 |||||||||||||||| ||||||| Sbjct: 184087 tctgcatgggggaggcaatgagga 184064
>emb|AJ250760.1|SCO250760 Mus musculus synthetic construct for anti-guinea pig C5 ScFv antibody, clone E10 Length = 735 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcaggctgctgatctgcatg 388 |||||||||||||||||||| Sbjct: 259 tcaggctgctgatctgcatg 240
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 aggcggcgagtcgcgcggcg 295 |||||||||||||||||||| Sbjct: 1529779 aggcggcgagtcgcgcggcg 1529798
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ccgccggctacgcgcgcggg 127 |||||||||||||||||||| Sbjct: 5939242 ccgccggctacgcgcgcggg 5939261
>dbj|AB244528.1| Nocardioides aromaticivorans carbazole catabolic gene cluster, partial and complete cds Length = 17582 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 cccggcctgctgcgccgcca 161 |||||||||||||||||||| Sbjct: 3333 cccggcctgctgcgccgcca 3314
>gb|U49832.1|XXU49832 Synthetic single chain Fv antibody against potato virus V coat protein, mRNA, partial cds Length = 902 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcaggctgctgatctgcatg 388 |||||||||||||||||||| Sbjct: 691 tcaggctgctgatctgcatg 672
>emb|X58584.1|MMIG011 Mouse hybridoma 12s84 mRNA for immunoglobuin heavy chain V region Length = 352 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcaggctgctgatctgcatg 388 |||||||||||||||||||| Sbjct: 254 tcaggctgctgatctgcatg 235
>emb|X58582.1|MMIG09 Mouse hybridoma 12s28 mRNA for immunoglobuin heavy chain V region Length = 357 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcaggctgctgatctgcatg 388 |||||||||||||||||||| Sbjct: 259 tcaggctgctgatctgcatg 240
>emb|X58580.1|MMIG07 Mouse hybridoma 12s18 mRNA for immunoglobuin heavy chain V region Length = 357 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcaggctgctgatctgcatg 388 |||||||||||||||||||| Sbjct: 259 tcaggctgctgatctgcatg 240
>emb|X02185.1|MMIGGVD4 M.musculus mRNA for IgG heavy chain (partial) Gloop 4 Length = 348 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcaggctgctgatctgcatg 388 |||||||||||||||||||| Sbjct: 241 tcaggctgctgatctgcatg 222
>dbj|AB050080.1| Mus musculus VH9H8 mRNA for anti-A/U antibody, partial cds Length = 471 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcaggctgctgatctgcatg 388 |||||||||||||||||||| Sbjct: 323 tcaggctgctgatctgcatg 304
>dbj|AB062577.1| Mus musculus IgVH mRNA for Immunoglobulin heavy chain, partial cds, clone:WT11 Length = 401 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcaggctgctgatctgcatg 388 |||||||||||||||||||| Sbjct: 259 tcaggctgctgatctgcatg 240 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,243,464 Number of Sequences: 3902068 Number of extensions: 3243464 Number of successful extensions: 72504 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71115 Number of HSP's gapped (non-prelim): 1379 length of query: 506 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 484 effective length of database: 17,147,199,772 effective search space: 8299244689648 effective search space used: 8299244689648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)