>dbj|AK119933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-A09,
          full insert sequence
          Length = 1094

 Score =  192 bits (97), Expect = 1e-46
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgcatgcaaacaaatcactagcgagccgcatacatcacatcacaaacgaagcgcggcac 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atgcatgcaaacaaatcactagcgagccgcatacatcacatcacaaacgaagcgcggcac 60

                                               
Query: 61 gcaatggcgccctcctcgtcgtctccactgccggcgt 97
          |||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaatggcgccctcctcgtcgtctccactgccggcgt 97

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 77       cgtcgtctccactgccggcgtt 98
                ||||||||||||||||||||||
Sbjct: 29537375 cgtcgtctccactgccggcgtt 29537354

>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0655A07
          Length = 172473

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 77     cgtcgtctccactgccggcgtt 98
              ||||||||||||||||||||||
Sbjct: 101881 cgtcgtctccactgccggcgtt 101860

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 46      aacgaagcgcggcacgcaatggcgcc 71
               ||||||||||| ||||||||||||||
Sbjct: 2717742 aacgaagcgcgacacgcaatggcgcc 2717717

>gb|AC117428.3| Homo sapiens 3 BAC RP11-66P11 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 12446

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    tgcatgcaaacaaatcacta 21
            ||||||||||||||||||||
Sbjct: 1760 tgcatgcaaacaaatcacta 1779

>gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169964

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      tgcatgcaaacaaatcacta 21
              ||||||||||||||||||||
Sbjct: 169725 tgcatgcaaacaaatcacta 169744

>ref|NM_058562.1| Caenorhabditis elegans Y39G10AR.15 (Y39G10AR.15) mRNA, complete cds
          Length = 2115

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  tctccactgccggcgttttt 101
           ||||||||||||||||||||
Sbjct: 44  tctccactgccggcgttttt 25

>gb|AC025716.2| Caenorhabditis elegans cosmid Y39G10AR, complete sequence
          Length = 132558

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tctccactgccggcgttttt 101
             ||||||||||||||||||||
Sbjct: 45481 tctccactgccggcgttttt 45500

>ref|NM_183994.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2820

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 68  cgccctcctcgtcgtctcc 86
           |||||||||||||||||||
Sbjct: 308 cgccctcctcgtcgtctcc 326

>ref|NM_190029.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 426

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 73 tcctcgtcgtctccactgc 91
          |||||||||||||||||||
Sbjct: 44 tcctcgtcgtctccactgc 62

>gb|AC121297.20| Mus musculus chromosome 1, clone RP23-326H11, complete sequence
          Length = 207496

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      atgcatgcaaacaaatcac 19
              |||||||||||||||||||
Sbjct: 131939 atgcatgcaaacaaatcac 131921

>gb|AC151265.3| Mus musculus BAC clone RP24-372H7 from chromosome 17, complete sequence
          Length = 191739

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     atgcatgcaaacaaatcac 19
             |||||||||||||||||||
Sbjct: 11895 atgcatgcaaacaaatcac 11877

>gb|AE012407.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 315
            of 460 of the complete genome
          Length = 12052

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 52   gcgcggcacgcaatggcgc 70
            |||||||||||||||||||
Sbjct: 5408 gcgcggcacgcaatggcgc 5390

>gb|AC021486.10| Homo sapiens chromosome , clone RP11-73I6, complete sequence
          Length = 144356

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     atgcaaacaaatcactagc 23
             |||||||||||||||||||
Sbjct: 25987 atgcaaacaaatcactagc 26005

>gb|AC175205.2| Sporobolomyces roseus clone JGIBAIF-5L1, complete sequence
          Length = 36144

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 71    cctcctcgtcgtctccact 89
             |||||||||||||||||||
Sbjct: 33567 cctcctcgtcgtctccact 33549

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 52      gcgcggcacgcaatggcgc 70
               |||||||||||||||||||
Sbjct: 1428926 gcgcggcacgcaatggcgc 1428944

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 73       tcctcgtcgtctccactgc 91
                |||||||||||||||||||
Sbjct: 40891823 tcctcgtcgtctccactgc 40891841



 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 73       tcctcgtcgtctccactgc 91
                |||||||||||||||||||
Sbjct: 24927023 tcctcgtcgtctccactgc 24927005



 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 73       tcctcgtcgtctccactgc 91
                |||||||||||||||||||
Sbjct: 21382762 tcctcgtcgtctccactgc 21382780



 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 68       cgccctcctcgtcgtctcc 86
                |||||||||||||||||||
Sbjct: 13777952 cgccctcctcgtcgtctcc 13777970

>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506E04
          Length = 139934

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 73     tcctcgtcgtctccactgc 91
              |||||||||||||||||||
Sbjct: 103929 tcctcgtcgtctccactgc 103947

>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0496H05
          Length = 147817

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 73     tcctcgtcgtctccactgc 91
              |||||||||||||||||||
Sbjct: 104700 tcctcgtcgtctccactgc 104718

>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0423A12
          Length = 178649

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 73    tcctcgtcgtctccactgc 91
             |||||||||||||||||||
Sbjct: 20248 tcctcgtcgtctccactgc 20266

>dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1146B04
          Length = 145186

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 68     cgccctcctcgtcgtctcc 86
              |||||||||||||||||||
Sbjct: 116280 cgccctcctcgtcgtctcc 116298

>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0501G01
          Length = 154561

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 73     tcctcgtcgtctccactgc 91
              |||||||||||||||||||
Sbjct: 150143 tcctcgtcgtctccactgc 150125

>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0440D10
          Length = 144340

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 68    cgccctcctcgtcgtctcc 86
             |||||||||||||||||||
Sbjct: 15355 cgccctcctcgtcgtctcc 15373

>dbj|AP003075.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0468H06
          Length = 155031

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 73    tcctcgtcgtctccactgc 91
             |||||||||||||||||||
Sbjct: 24148 tcctcgtcgtctccactgc 24166

>dbj|AK069585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022M24, full
           insert sequence
          Length = 3249

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 68  cgccctcctcgtcgtctcc 86
           |||||||||||||||||||
Sbjct: 113 cgccctcctcgtcgtctcc 131

>emb|CT010473.14| Mouse DNA sequence from clone RP23-238D5 on chromosome 17, complete
             sequence
          Length = 173998

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     atgcatgcaaacaaatcac 19
             |||||||||||||||||||
Sbjct: 88376 atgcatgcaaacaaatcac 88358


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 632,930
Number of Sequences: 3902068
Number of extensions: 632930
Number of successful extensions: 48580
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48249
Number of HSP's gapped (non-prelim): 331
length of query: 101
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 80
effective length of database: 17,151,101,840
effective search space: 1372088147200
effective search space used: 1372088147200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)