ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet12g03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 139 bits (70), Expect = 8e-30 Identities = 115/130 (88%) Strand = Plus / Plus Query: 106 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 165 ||||||||||| |||||||| || || ||| ||||||| |||||||||||| ||| |||| Sbjct: 43542 cccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctac 43601 Query: 166 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 225 |||||| ||||| ||||||||||||||| | | |||||| ||||||| |||||||||||| Sbjct: 43602 ctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgc 43661 Query: 226 ctcggcggcg 235 |||||||||| Sbjct: 43662 ctcggcggcg 43671
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 139 bits (70), Expect = 8e-30 Identities = 115/130 (88%) Strand = Plus / Minus Query: 106 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 165 ||||||||||| |||||||| || || ||| ||||||| |||||||||||| ||| |||| Sbjct: 52233 cccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctac 52174 Query: 166 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 225 |||||| ||||| ||||||||||||||| | | |||||| ||||||| |||||||||||| Sbjct: 52173 ctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgc 52114 Query: 226 ctcggcggcg 235 |||||||||| Sbjct: 52113 ctcggcggcg 52104
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 139 bits (70), Expect = 8e-30 Identities = 115/130 (88%) Strand = Plus / Minus Query: 106 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 165 ||||||||||| |||||||| || || ||| ||||||| |||||||||||| ||| |||| Sbjct: 7139013 cccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctac 7138954 Query: 166 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 225 |||||| ||||| ||||||||||||||| | | |||||| ||||||| |||||||||||| Sbjct: 7138953 ctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgc 7138894 Query: 226 ctcggcggcg 235 |||||||||| Sbjct: 7138893 ctcggcggcg 7138884 Score = 127 bits (64), Expect = 3e-26 Identities = 166/200 (83%) Strand = Plus / Minus Query: 98 tgttcgtccccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcc 157 |||| ||||| ||||||| ||| |||| || ||||| |||| ||||||||||||| || Sbjct: 11303067 tgttggtcccgaccgacgacgagatgctgcaaacgcaggccgagctgtggcgccacaccc 11303008 Query: 158 tctgctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggcca 217 ||| ||||||||| ||||| | ||||| ||||||||| |||||||| ||||||| |||| Sbjct: 11303007 tctcctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgcca 11302948 Query: 218 tccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccg 277 ||||||||| |||||||||||| || | | |||| || ||| |||| |||||||| ||| Sbjct: 11302947 tccaccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccca 11302888 Query: 278 cgtccaagctgccgttcctc 297 || ||||||| || |||||| Sbjct: 11302887 cggccaagctccccttcctc 11302868 Score = 123 bits (62), Expect = 5e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 106 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 165 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 11494867 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 11494808 Query: 166 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 225 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 11494807 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 11494748 Query: 226 ctcggcggcgccgcgtcc 243 |||||||||||||||||| Sbjct: 11494747 ctcggcggcgccgcgtcc 11494730 Score = 119 bits (60), Expect = 7e-24 Identities = 96/108 (88%) Strand = Plus / Plus Query: 127 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 186 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 11482291 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11482350 Query: 187 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 234 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 11482351 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 11482398 Score = 103 bits (52), Expect = 4e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 109 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 168 ||||||| |||||||| || |||||| |||||||||||||||||||||||| || | || Sbjct: 11331664 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 11331605 Query: 169 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 228 ||| ||||| || ||| ||||||||| | |||||| ||||||| |||||||||||| Sbjct: 11331604 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 11331545 Query: 229 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 272 || ||| |||| || | | |||| || ||||||||||||||||| Sbjct: 11331544 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 11331501 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 137 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 196 |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 11550532 ccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtcg 11550473 Query: 197 acctcggcgtccccacggccatccaccgcctcggcggcgccgc 239 | |||||| |||| || | ||||| |||||||||||||||| Sbjct: 11550472 agctcggcatcccgaccacgatccatggcctcggcggcgccgc 11550430 Score = 89.7 bits (45), Expect = 6e-15 Identities = 153/189 (80%) Strand = Plus / Minus Query: 109 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 168 ||||||| |||||||| || |||||| ||||| ||| |||||||||||||| || | || Sbjct: 11355312 accgacgacgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtc 11355253 Query: 169 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 228 ||| ||||| || | | ||||||||| | |||||| ||||||| |||||||||||| | Sbjct: 11355252 acgtccatggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgcc 11355193 Query: 229 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccgcgtccaagctg 288 |||||| |||| || | | |||| || ||||||||||| ||||| || | ||||||| Sbjct: 11355192 ggcggcaccgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctc 11355133 Query: 289 ccgttcctc 297 ||||||||| Sbjct: 11355132 ccgttcctc 11355124 Score = 71.9 bits (36), Expect = 1e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 206 tccccacggccatccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccc 265 ||||||| |||||||||||| ||||||||||||||| | | |||| ||||| |||| | Sbjct: 11439513 tccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgctc 11439454 Query: 266 tgtccctgcccgcgtccaagctgccgttcctc 297 ||||||| || |||||||||| ||||||||| Sbjct: 11439453 tgtccctcccgccgtccaagctaccgttcctc 11439422 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 117 ggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctcacg 171 ||||||||| || || ||| |||| || ||||||||||||||||||||| ||||| Sbjct: 11439602 ggagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacg 11439548 Score = 46.1 bits (23), Expect = 0.086 Identities = 65/79 (82%) Strand = Plus / Minus Query: 161 gctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatcc 220 ||||| ||| ||||||| ||||| |||||||| || |||||| ||||| || |||| Sbjct: 19031109 gctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatccccgacgcgatcc 19031050 Query: 221 accgcctcggcggcgccgc 239 |||||| |||||||||||| Sbjct: 19031049 accgccgcggcggcgccgc 19031031 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 tcttcacctccaccgacgccg 352 ||||||||||||||||||||| Sbjct: 25593958 tcttcacctccaccgacgccg 25593978
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 139 bits (70), Expect = 8e-30 Identities = 115/130 (88%) Strand = Plus / Minus Query: 106 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 165 ||||||||||| |||||||| || || ||| ||||||| |||||||||||| ||| |||| Sbjct: 7204984 cccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctac 7204925 Query: 166 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 225 |||||| ||||| ||||||||||||||| | | |||||| ||||||| |||||||||||| Sbjct: 7204924 ctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgc 7204865 Query: 226 ctcggcggcg 235 |||||||||| Sbjct: 7204864 ctcggcggcg 7204855 Score = 127 bits (64), Expect = 3e-26 Identities = 166/200 (83%) Strand = Plus / Minus Query: 98 tgttcgtccccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcc 157 |||| ||||| ||||||| ||| |||| || ||||| |||| ||||||||||||| || Sbjct: 11382256 tgttggtcccgaccgacgacgagatgctgcaaacgcaggccgagctgtggcgccacaccc 11382197 Query: 158 tctgctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggcca 217 ||| ||||||||| ||||| | ||||| ||||||||| |||||||| ||||||| |||| Sbjct: 11382196 tctcctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgcca 11382137 Query: 218 tccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccg 277 ||||||||| |||||||||||| || | | |||| || ||| |||| |||||||| ||| Sbjct: 11382136 tccaccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccca 11382077 Query: 278 cgtccaagctgccgttcctc 297 || ||||||| || |||||| Sbjct: 11382076 cggccaagctccccttcctc 11382057 Score = 123 bits (62), Expect = 5e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 106 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 165 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 11574056 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 11573997 Query: 166 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 225 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 11573996 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 11573937 Query: 226 ctcggcggcgccgcgtcc 243 |||||||||||||||||| Sbjct: 11573936 ctcggcggcgccgcgtcc 11573919 Score = 119 bits (60), Expect = 7e-24 Identities = 96/108 (88%) Strand = Plus / Plus Query: 127 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 186 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 11561480 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11561539 Query: 187 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 234 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 11561540 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 11561587 Score = 103 bits (52), Expect = 4e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 109 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 168 ||||||| |||||||| || |||||| |||||||||||||||||||||||| || | || Sbjct: 11410853 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 11410794 Query: 169 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 228 ||| ||||| || ||| ||||||||| | |||||| ||||||| |||||||||||| Sbjct: 11410793 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 11410734 Query: 229 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 272 || ||| |||| || | | |||| || ||||||||||||||||| Sbjct: 11410733 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 11410690 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 137 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 196 |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 11629721 ccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtcg 11629662 Query: 197 acctcggcgtccccacggccatccaccgcctcggcggcgccgc 239 | |||||| |||| || | ||||| |||||||||||||||| Sbjct: 11629661 agctcggcatcccgaccacgatccatggcctcggcggcgccgc 11629619 Score = 89.7 bits (45), Expect = 6e-15 Identities = 153/189 (80%) Strand = Plus / Minus Query: 109 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 168 ||||||| |||||||| || |||||| ||||| ||| |||||||||||||| || | || Sbjct: 11434501 accgacgacgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtc 11434442 Query: 169 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 228 ||| ||||| || | | ||||||||| | |||||| ||||||| |||||||||||| | Sbjct: 11434441 acgtccatggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgcc 11434382 Query: 229 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccgcgtccaagctg 288 |||||| |||| || | | |||| || ||||||||||| ||||| || | ||||||| Sbjct: 11434381 ggcggcaccgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctc 11434322 Query: 289 ccgttcctc 297 ||||||||| Sbjct: 11434321 ccgttcctc 11434313 Score = 71.9 bits (36), Expect = 1e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 206 tccccacggccatccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccc 265 ||||||| |||||||||||| ||||||||||||||| | | |||| ||||| |||| | Sbjct: 11518702 tccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgctc 11518643 Query: 266 tgtccctgcccgcgtccaagctgccgttcctc 297 ||||||| || |||||||||| ||||||||| Sbjct: 11518642 tgtccctcccgccgtccaagctaccgttcctc 11518611 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 117 ggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctcacg 171 ||||||||| || || ||| |||| || ||||||||||||||||||||| ||||| Sbjct: 11518791 ggagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacg 11518737 Score = 46.1 bits (23), Expect = 0.086 Identities = 65/79 (82%) Strand = Plus / Minus Query: 161 gctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatcc 220 ||||| ||| ||||||| ||||| |||||||| || |||||| ||||| || |||| Sbjct: 19189758 gctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatccccgacgcgatcc 19189699 Query: 221 accgcctcggcggcgccgc 239 |||||| |||||||||||| Sbjct: 19189698 accgccgcggcggcgccgc 19189680 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 tcttcacctccaccgacgccg 352 ||||||||||||||||||||| Sbjct: 25912628 tcttcacctccaccgacgccg 25912648
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 127 bits (64), Expect = 3e-26 Identities = 166/200 (83%) Strand = Plus / Minus Query: 98 tgttcgtccccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcc 157 |||| ||||| ||||||| ||| |||| || ||||| |||| ||||||||||||| || Sbjct: 89425 tgttggtcccgaccgacgacgagatgctgcaaacgcaggccgagctgtggcgccacaccc 89366 Query: 158 tctgctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggcca 217 ||| ||||||||| ||||| | ||||| ||||||||| |||||||| ||||||| |||| Sbjct: 89365 tctcctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgcca 89306 Query: 218 tccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccg 277 ||||||||| |||||||||||| || | | |||| || ||| |||| |||||||| ||| Sbjct: 89305 tccaccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccca 89246 Query: 278 cgtccaagctgccgttcctc 297 || ||||||| || |||||| Sbjct: 89245 cggccaagctccccttcctc 89226 Score = 103 bits (52), Expect = 4e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 109 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 168 ||||||| |||||||| || |||||| |||||||||||||||||||||||| || | || Sbjct: 118022 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 117963 Query: 169 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 228 ||| ||||| || ||| ||||||||| | |||||| ||||||| |||||||||||| Sbjct: 117962 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 117903 Query: 229 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 272 || ||| |||| || | | |||| || ||||||||||||||||| Sbjct: 117902 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 117859 Score = 89.7 bits (45), Expect = 6e-15 Identities = 153/189 (80%) Strand = Plus / Minus Query: 109 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 168 ||||||| |||||||| || |||||| ||||| ||| |||||||||||||| || | || Sbjct: 141670 accgacgacgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtc 141611 Query: 169 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 228 ||| ||||| || | | ||||||||| | |||||| ||||||| |||||||||||| | Sbjct: 141610 acgtccatggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgcc 141551 Query: 229 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccgcgtccaagctg 288 |||||| |||| || | | |||| || ||||||||||| ||||| || | ||||||| Sbjct: 141550 ggcggcaccgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctc 141491 Query: 289 ccgttcctc 297 ||||||||| Sbjct: 141490 ccgttcctc 141482
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 123 bits (62), Expect = 5e-25 Identities = 119/138 (86%) Strand = Plus / Plus Query: 106 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 165 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 118921 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 118980 Query: 166 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 225 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 118981 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 119040 Query: 226 ctcggcggcgccgcgtcc 243 |||||||||||||||||| Sbjct: 119041 ctcggcggcgccgcgtcc 119058 Score = 119 bits (60), Expect = 7e-24 Identities = 96/108 (88%) Strand = Plus / Minus Query: 127 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 186 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 131497 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 131438 Query: 187 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 234 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 131437 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 131390 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 137 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 196 |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 63256 ccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtcg 63315 Query: 197 acctcggcgtccccacggccatccaccgcctcggcggcgccgc 239 | |||||| |||| || | ||||| |||||||||||||||| Sbjct: 63316 agctcggcatcccgaccacgatccatggcctcggcggcgccgc 63358
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence Length = 128418 Score = 123 bits (62), Expect = 5e-25 Identities = 119/138 (86%) Strand = Plus / Plus Query: 106 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 165 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 4670 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 4729 Query: 166 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 225 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 4730 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 4789 Query: 226 ctcggcggcgccgcgtcc 243 |||||||||||||||||| Sbjct: 4790 ctcggcggcgccgcgtcc 4807 Score = 119 bits (60), Expect = 7e-24 Identities = 96/108 (88%) Strand = Plus / Minus Query: 127 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 186 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 17246 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 17187 Query: 187 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 234 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 17186 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 17139 Score = 71.9 bits (36), Expect = 1e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 206 tccccacggccatccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccc 265 ||||||| |||||||||||| ||||||||||||||| | | |||| ||||| |||| | Sbjct: 60024 tccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgctc 60083 Query: 266 tgtccctgcccgcgtccaagctgccgttcctc 297 ||||||| || |||||||||| ||||||||| Sbjct: 60084 tgtccctcccgccgtccaagctaccgttcctc 60115 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 117 ggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctcacg 171 ||||||||| || || ||| |||| || ||||||||||||||||||||| ||||| Sbjct: 59935 ggagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacg 59989
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full insert sequence Length = 1362 Score = 123 bits (62), Expect = 5e-25 Identities = 119/138 (86%) Strand = Plus / Plus Query: 106 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 165 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 81 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 140 Query: 166 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 225 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 141 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 200 Query: 226 ctcggcggcgccgcgtcc 243 |||||||||||||||||| Sbjct: 201 ctcggcggcgccgcgtcc 218
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full insert sequence Length = 1264 Score = 123 bits (62), Expect = 5e-25 Identities = 119/138 (86%) Strand = Plus / Plus Query: 106 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 165 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 86 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 145 Query: 166 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 225 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 146 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 205 Query: 226 ctcggcggcgccgcgtcc 243 |||||||||||||||||| Sbjct: 206 ctcggcggcgccgcgtcc 223
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full insert sequence Length = 1300 Score = 119 bits (60), Expect = 7e-24 Identities = 96/108 (88%) Strand = Plus / Plus Query: 127 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 186 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 118 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 177 Query: 187 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 234 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 178 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 225
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full insert sequence Length = 1262 Score = 103 bits (52), Expect = 4e-19 Identities = 136/164 (82%) Strand = Plus / Plus Query: 109 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 168 ||||||| |||||||| || |||||| |||||||||||||||||||||||| || | || Sbjct: 83 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 142 Query: 169 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 228 ||| ||||| || ||| ||||||||| | |||||| ||||||| |||||||||||| Sbjct: 143 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 202 Query: 229 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 272 || ||| |||| || | | |||| || ||||||||||||||||| Sbjct: 203 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 246
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds Length = 1373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 137 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 196 |||||||||||||||||| ||| | |||||||||| ||||| |||||||||||||||| Sbjct: 94 ccgacctgtggcgccacaccctttactacctcacgtccatggggctccgctgcgccgtca 153 Query: 197 acctcggcgtccccacggccatccaccgcctcggcggcg 235 | |||||| |||| ||||| |||||| |||||| |||| Sbjct: 154 agctcggcatcccgacggcgatccacaacctcggtggcg 192
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence Length = 1299 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 106 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 165 ||||| ||||| |||||||| ||||||||| |||||||||||||||||||||||| |||| Sbjct: 63 cccacggacgccgagctgctgcaggcgcaggccgacctgtggcgccacagcctctactac 122 Query: 166 ct 167 || Sbjct: 123 ct 124 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 259 gccgccctgtccctgcccgcgtccaagctgccgttcctcgcccgcctgctgcgccagctc 318 ||||| ||||||||||| ||| ||||||| |||||||||| ||| || |||| | ||| Sbjct: 216 gccgcgctgtccctgccagcggccaagctcccgttcctcgggcgcgtgatgcggctgctg 275 Query: 319 gccacggcgggcgtcttc 336 | |||| ||||||||||| Sbjct: 276 gtcacgtcgggcgtcttc 293
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 187 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 239 ||||||| ||| |||||| ||||| | ||||||||||||| |||||||||||| Sbjct: 9845396 tgcgccgccgagctcggcatccccgccgccatccaccgccgcggcggcgccgc 9845344 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 181 ctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 239 ||||| ||||||| ||| ||||||||||||| ||||||||||||| || |||||||| Sbjct: 7318265 ctccggtgcgccgccgatctcggcgtccccagcgccatccaccgccggggaggcgccgc 7318207 Score = 44.1 bits (22), Expect = 0.34 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 214 gccatccaccgcctcggcg-gcgccgcgtc 242 ||||||||||||||||||| |||||||||| Sbjct: 25487667 gccatccaccgcctcggcgcgcgccgcgtc 25487638
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 187 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 239 ||||||| ||| |||||| ||||| | ||||||||||||| |||||||||||| Sbjct: 135638 tgcgccgccgagctcggcatccccgccgccatccaccgccgcggcggcgccgc 135586
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 187 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 239 ||||||| ||| |||||| ||||| | ||||||||||||| |||||||||||| Sbjct: 42031 tgcgccgccgagctcggcatccccgccgccatccaccgccgcggcggcgccgc 41979
>dbj|AP004862.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B11 Length = 166004 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 181 ctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 239 ||||| ||||||| ||| ||||||||||||| ||||||||||||| || |||||||| Sbjct: 24850 ctccggtgcgccgccgatctcggcgtccccagcgccatccaccgccggggaggcgccgc 24792
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 181 ctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 239 ||||| ||||||| ||| ||||||||||||| ||||||||||||| || |||||||| Sbjct: 153269 ctccggtgcgccgccgatctcggcgtccccagcgccatccaccgccggggaggcgccgc 153211
>ref|NM_191262.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 173 ccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcg 232 ||||||| ||||||||||||||||| |||||| |||| ||| ||||||||| |||| Sbjct: 92 ccatgtccctccgctgcgccgtcgagctcggcatccctgacgccgtccaccgccgtggcg 151 Query: 233 gcgccg 238 |||||| Sbjct: 152 gcgccg 157
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 173 ccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcg 232 ||||||| ||||||||||||||||| |||||| |||| ||| ||||||||| |||| Sbjct: 31604087 ccatgtccctccgctgcgccgtcgagctcggcatccctgacgccgtccaccgccgtggcg 31604146 Query: 233 gcgccg 238 |||||| Sbjct: 31604147 gcgccg 31604152
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 173 ccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcg 232 ||||||| ||||||||||||||||| |||||| |||| ||| ||||||||| |||| Sbjct: 17819 ccatgtccctccgctgcgccgtcgagctcggcatccctgacgccgtccaccgccgtggcg 17878 Query: 233 gcgccg 238 |||||| Sbjct: 17879 gcgccg 17884
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 173 ccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcg 232 ||||||| ||||||||||||||||| |||||| |||| ||| ||||||||| |||| Sbjct: 117110 ccatgtccctccgctgcgccgtcgagctcggcatccctgacgccgtccaccgccgtggcg 117169 Query: 233 gcgccg 238 |||||| Sbjct: 117170 gcgccg 117175
>gb|AY103669.1| Zea mays PCO073521 mRNA sequence Length = 1503 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Plus Query: 283 aagctgccgttcctcgcccgcctgctgcgccagctcgccacggcgggcgtcttcacc 339 ||||||||||||||| |||||||||||| | |||||| || ||||||| |||||| Sbjct: 231 aagctgccgttcctccgccgcctgctgcggctcctcgccgcgtcgggcgtgttcacc 287
>gb|AF033496.1|AF033496 Zea mays herbicide safener binding protein (SBP1) mRNA, complete cds Length = 1438 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Plus Query: 283 aagctgccgttcctcgcccgcctgctgcgccagctcgccacggcgggcgtcttcacc 339 ||||||||||||||| |||||||||||| | |||||| || ||||||| |||||| Sbjct: 229 aagctgccgttcctccgccgcctgctgcggctcctcgccgcgtcgggcgtgttcacc 285
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 46.1 bits (23), Expect = 0.086 Identities = 65/79 (82%) Strand = Plus / Minus Query: 161 gctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatcc 220 ||||| ||| ||||||| ||||| |||||||| || |||||| ||||| || |||| Sbjct: 134307 gctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatccccgacgcgatcc 134248 Query: 221 accgcctcggcggcgccgc 239 |||||| |||||||||||| Sbjct: 134247 accgccgcggcggcgccgc 134229
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 46.1 bits (23), Expect = 0.086 Identities = 65/79 (82%) Strand = Plus / Minus Query: 161 gctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatcc 220 ||||| ||| ||||||| ||||| |||||||| || |||||| ||||| || |||| Sbjct: 33927 gctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatccccgacgcgatcc 33868 Query: 221 accgcctcggcggcgccgc 239 |||||| |||||||||||| Sbjct: 33867 accgccgcggcggcgccgc 33849
>gb|BT017349.1| Zea mays clone EL01N0323G05.c mRNA sequence Length = 773 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 221 accgcctcggcggcgccgcgtccccg 246 ||||||||||||||| |||||||||| Sbjct: 144 accgcctcggcggcggcgcgtccccg 169
>gb|AE012128.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 36 of 460 of the complete genome Length = 10504 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 298 gcccgcctgctgcgccagctcg 319 |||||||||||||||||||||| Sbjct: 7929 gcccgcctgctgcgccagctcg 7950
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 298 gcccgcctgctgcgccagctcg 319 |||||||||||||||||||||| Sbjct: 394827 gcccgcctgctgcgccagctcg 394848 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cctcgcccgcctgctgcgcc 313 |||||||||||||||||||| Sbjct: 2334300 cctcgcccgcctgctgcgcc 2334281
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 44.1 bits (22), Expect = 0.34 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 214 gccatccaccgcctcggcg-gcgccgcgtc 242 ||||||||||||||||||| |||||||||| Sbjct: 5984 gccatccaccgcctcggcgcgcgccgcgtc 5955
>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19 Length = 164483 Score = 44.1 bits (22), Expect = 0.34 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 214 gccatccaccgcctcggcg-gcgccgcgtc 242 ||||||||||||||||||| |||||||||| Sbjct: 161676 gccatccaccgcctcggcgcgcgccgcgtc 161647
>emb|X67324.1|ZMFS18 Z.mays MFS18 mRNA Length = 969 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 221 accgcctcggcggcgccgcgtccccg 246 ||||||||||||||| |||||||||| Sbjct: 300 accgcctcggcggcggcgcgtccccg 325
>dbj|AK058562.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D11, full insert sequence Length = 1388 Score = 44.1 bits (22), Expect = 0.34 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 214 gccatccaccgcctcggcg-gcgccgcgtc 242 ||||||||||||||||||| |||||||||| Sbjct: 744 gccatccaccgcctcggcgcgcgccgcgtc 773
>gb|AY106835.1| Zea mays PCO070523 mRNA sequence Length = 727 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 221 accgcctcggcggcgccgcgtccccg 246 ||||||||||||||| |||||||||| Sbjct: 236 accgcctcggcggcggcgcgtccccg 261
>gb|AY103988.1| Zea mays PCO070524 mRNA sequence Length = 1061 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 221 accgcctcggcggcgccgcgtccccg 246 ||||||||||||||| |||||||||| Sbjct: 317 accgcctcggcggcggcgcgtccccg 342
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05, complete sequence Length = 162223 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 tcttcacctccaccgacgccg 352 ||||||||||||||||||||| Sbjct: 84005 tcttcacctccaccgacgccg 84025
>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0015J03, complete sequence Length = 135940 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 332 tcttcacctccaccgacgccg 352 ||||||||||||||||||||| Sbjct: 77627 tcttcacctccaccgacgccg 77607
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 tcttcacctccaccgacgccg 352 ||||||||||||||||||||| Sbjct: 4214833 tcttcacctccaccgacgccg 4214853
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 tcttcacctccaccgacgccg 352 ||||||||||||||||||||| Sbjct: 4215654 tcttcacctccaccgacgccg 4215674
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tgcgccagctcgccacggcg 327 |||||||||||||||||||| Sbjct: 1923427 tgcgccagctcgccacggcg 1923446
>ref|XM_585828.2| PREDICTED: Bos taurus hypothetical LOC508965 (LOC508965), mRNA Length = 1491 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gttcctcgcccgcctgctgc 310 |||||||||||||||||||| Sbjct: 488 gttcctcgcccgcctgctgc 469
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 cggcgggcgtcttcacctccaccg 346 |||| ||||||||||||||||||| Sbjct: 1856099 cggctggcgtcttcacctccaccg 1856076
>gb|BC116031.1| Bos taurus cDNA clone MGC:139028 IMAGE:8095211, complete cds Length = 1816 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gttcctcgcccgcctgctgc 310 |||||||||||||||||||| Sbjct: 518 gttcctcgcccgcctgctgc 499
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 cgcccgcctgctgcgccagctcgc 320 ||||||||||| |||||||||||| Sbjct: 68226 cgcccgcctgcggcgccagctcgc 68203
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 cgcccgcctgctgcgccagctcgc 320 ||||||||||| |||||||||||| Sbjct: 68215 cgcccgcctgcggcgccagctcgc 68192
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 cgcccgcctgctgcgccagctcgc 320 ||||||||||| |||||||||||| Sbjct: 35896 cgcccgcctgcggcgccagctcgc 35873
>gb|AE012325.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 233 of 460 of the complete genome Length = 11015 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cctcgcccgcctgctgcgcc 313 |||||||||||||||||||| Sbjct: 9317 cctcgcccgcctgctgcgcc 9336
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 ggtcgccgccctgtccctgcccgc 278 ||||||||||||||| |||||||| Sbjct: 3933372 ggtcgccgccctgtcgctgcccgc 3933349
>ref|XM_944210.1| PREDICTED: Homo sapiens hypothetical LOC90024 (FLJ20021), mRNA Length = 919 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 gttcctcgcccgcctgctgcgcca 314 |||||| ||||||||||||||||| Sbjct: 749 gttcctggcccgcctgctgcgcca 772
>ref|XM_028217.4| PREDICTED: Homo sapiens hypothetical LOC90024 (FLJ20021), mRNA Length = 919 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 gttcctcgcccgcctgctgcgcca 314 |||||| ||||||||||||||||| Sbjct: 749 gttcctggcccgcctgctgcgcca 772
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 gcccgcctgctgcgccagct 317 |||||||||||||||||||| Sbjct: 222396 gcccgcctgctgcgccagct 222415
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 316 ctcgccacggcgggcgtcttcacctcca 343 |||||| | ||||||||||||||||||| Sbjct: 8081005 ctcgccgccgcgggcgtcttcacctcca 8081032 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cgccgtcgacctcggcgtcc 208 |||||||||||||||||||| Sbjct: 372850 cgccgtcgacctcggcgtcc 372869
>gb|AY204470.1| Myxococcus xanthus clone C1255 adventurous gliding motility protein J (agmJ) gene, complete cds Length = 2085 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 gtccccgtccgaactggtcgccgc 263 ||||||| |||||||||||||||| Sbjct: 1240 gtccccggccgaactggtcgccgc 1217
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 ccgacgcggagctgctccaggcgc 133 |||||||||||| ||||||||||| Sbjct: 1355696 ccgacgcggagcagctccaggcgc 1355719
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ccaccgacgcggagctgctc 126 |||||||||||||||||||| Sbjct: 4717181 ccaccgacgcggagctgctc 4717162
>dbj|AK000028.1| Homo sapiens cDNA FLJ20021 fis, clone ADSE01233 Length = 806 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 gttcctcgcccgcctgctgcgcca 314 |||||| ||||||||||||||||| Sbjct: 617 gttcctggcccgcctgctgcgcca 640
>ref|NM_207823.1| Eremothecium gossypii AAL072Cp (AAL072C), mRNA Length = 3663 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gcccgcctgctgcgccagct 317 |||||||||||||||||||| Sbjct: 225 gcccgcctgctgcgccagct 206
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 gcctgctgcgccagctcgcc 321 |||||||||||||||||||| Sbjct: 3010826 gcctgctgcgccagctcgcc 3010845
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 tcgcccgcctgctgcgccagctcg 319 ||||| |||||||||||||||||| Sbjct: 1196482 tcgccagcctgctgcgccagctcg 1196505
>dbj|AP001816.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:563D14, complete sequence Length = 123323 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 gttcctcgcccgcctgctgcgcca 314 |||||| ||||||||||||||||| Sbjct: 111070 gttcctggcccgcctgctgcgcca 111093 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,018,274 Number of Sequences: 3902068 Number of extensions: 2018274 Number of successful extensions: 49633 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 47358 Number of HSP's gapped (non-prelim): 2269 length of query: 395 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 373 effective length of database: 17,147,199,772 effective search space: 6395905514956 effective search space used: 6395905514956 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
