ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet12f08 |
|---|---|
| Clone Library Name | barley_pub |
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 233 bits (593), Expect(2) = 3e-63 Identities = 111/121 (91%), Positives = 117/121 (96%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLG 237 MA+TTMSLSS +FAGKAVKNLPSS++ G+ARV MRKTAAKAKQV+S SPWYGSDRVLYLG Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLG 60 Query: 238 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 417 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA Sbjct: 61 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120 Query: 418 R 420 R Sbjct: 121 R 121 Score = 28.1 bits (61), Expect(2) = 3e-63 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEA WF Sbjct: 116 PELLARNGVKFGEAGWF 132
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 219 bits (557), Expect(2) = 7e-60 Identities = 112/122 (91%), Positives = 115/122 (94%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVA-SGSPWYGSDRVLYL 234 MAS+TM+LSS AFAGKAV N+PSSS FGEARVTMRKTAAKAK A SGSPWYG DRVLYL Sbjct: 1 MASSTMALSSTAFAGKAV-NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYL 58 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 59 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 118 Query: 415 AR 420 AR Sbjct: 119 AR 120 Score = 30.8 bits (68), Expect(2) = 7e-60 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 115 PELLARNGVKFGEAVWF 131
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 214 bits (544), Expect(2) = 2e-58 Identities = 110/122 (90%), Positives = 114/122 (93%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVAS-GSPWYGSDRVLYL 234 MAS+TM+LSS AFAGKAV N+PSS +FGEARVTMRKTAAKAK AS GSPWYG DRVLYL Sbjct: 1 MASSTMALSSTAFAGKAV-NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYL 58 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL Sbjct: 59 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 118 Query: 415 AR 420 AR Sbjct: 119 AR 120 Score = 30.8 bits (68), Expect(2) = 2e-58 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 115 PELLARNGVKFGEAVWF 131
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 209 bits (531), Expect(2) = 7e-57 Identities = 102/122 (83%), Positives = 110/122 (90%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA++TM+LSS +FAGKAVK PSSS + G +VTMRKTA+KAK V+SGSPWYG DRV YL Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 415 AR 420 AR Sbjct: 121 AR 122 Score = 30.8 bits (68), Expect(2) = 7e-57 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 117 PELLARNGVKFGEAVWF 133
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 208 bits (529), Expect(2) = 1e-56 Identities = 102/122 (83%), Positives = 107/122 (87%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA++TM+LSS FAGKAVK PSSS + G RVTMRKTA KAK +SGSPWYG DRV YL Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 415 AR 420 AR Sbjct: 121 AR 122 Score = 30.8 bits (68), Expect(2) = 1e-56 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 117 PELLARNGVKFGEAVWF 133
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 206 bits (523), Expect(2) = 6e-56 Identities = 100/122 (81%), Positives = 107/122 (87%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA+ TM+LSS +FAGKAVK PSSS + G +VTMRKT KAK ++SGSPWYG DRV YL Sbjct: 1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 415 AR 420 AR Sbjct: 121 AR 122 Score = 30.8 bits (68), Expect(2) = 6e-56 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 117 PELLARNGVKFGEAVWF 133
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 205 bits (521), Expect(2) = 1e-55 Identities = 100/122 (81%), Positives = 109/122 (89%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA++TM+LSS +FAGKAVK PSSS + G +VTMRKTA+KAK V+S SPWYG +RV YL Sbjct: 1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYL 60 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 415 AR 420 AR Sbjct: 121 AR 122 Score = 30.8 bits (68), Expect(2) = 1e-55 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 117 PELLARNGVKFGEAVWF 133 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 241 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 393 ++GEP + +D GL+ DPE FA+ + E+ + R AM G Sbjct: 178 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 228
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 205 bits (521), Expect(2) = 1e-55 Identities = 100/121 (82%), Positives = 107/121 (88%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLG 237 MA+ TM+LSS A AGKA ++ VFGE R+TMRK+AAK K ASGSPWYG+DRVLYLG Sbjct: 1 MAAATMALSSPALAGKA-----AAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLG 55 Query: 238 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 417 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLA Sbjct: 56 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 115 Query: 418 R 420 R Sbjct: 116 R 116 Score = 30.8 bits (68), Expect(2) = 1e-55 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 111 PELLARNGVKFGEAVWF 127
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 202 bits (515), Expect(2) = 5e-55 Identities = 99/122 (81%), Positives = 106/122 (86%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MAS+TM+LSS + AGKAVK P++S + GE R+TMRKTA K K V S SPWYG DRV YL Sbjct: 1 MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 415 AR 420 AR Sbjct: 121 AR 122 Score = 30.8 bits (68), Expect(2) = 5e-55 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 117 PELLARNGVKFGEAVWF 133
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 202 bits (513), Expect(2) = 8e-55 Identities = 99/122 (81%), Positives = 105/122 (86%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA+ TM+LSS +FAGKAVK PSSS + G + TMRKT KAK V+SGSPWYG DRV YL Sbjct: 1 MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 60 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 415 AR 420 AR Sbjct: 121 AR 122 Score = 30.8 bits (68), Expect(2) = 8e-55 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 117 PELLARNGVKFGEAVWF 133
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 202 bits (513), Expect(2) = 8e-55 Identities = 102/122 (83%), Positives = 108/122 (88%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA++T +LSS FAGKAVK PSSS V G +VTMRKTA+KAK V+SGSPWYG DRV YL Sbjct: 1 MAASTTALSSP-FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYL 59 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119 Query: 415 AR 420 AR Sbjct: 120 AR 121 Score = 30.8 bits (68), Expect(2) = 8e-55 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 116 PELLARNGVKFGEAVWF 132
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 203 bits (517), Expect(2) = 2e-54 Identities = 99/122 (81%), Positives = 104/122 (85%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA+ TM+LSS FAGK VK PSSS + G + TMRKTA KAK V+SGSPWYG DRV YL Sbjct: 1 MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYL 60 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120 Query: 415 AR 420 AR Sbjct: 121 AR 122 Score = 28.1 bits (61), Expect(2) = 2e-54 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVW 449 P + NGVKFGEAVW Sbjct: 117 PELFARNGVKFGEAVW 132
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 201 bits (510), Expect(2) = 2e-54 Identities = 102/122 (83%), Positives = 107/122 (87%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA++T +LSS FAGKAVK PSSS V G +VTMRKTA KAK V+SGSPWYG DRV YL Sbjct: 1 MAASTTALSSP-FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYL 59 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119 Query: 415 AR 420 AR Sbjct: 120 AR 121 Score = 30.8 bits (68), Expect(2) = 2e-54 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 116 PELLARNGVKFGEAVWF 132 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 241 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 393 ++GEP + +D GL+ DPE FA+ + E+ + R AM G Sbjct: 177 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 227
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 201 bits (511), Expect(2) = 2e-54 Identities = 98/122 (80%), Positives = 106/122 (86%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA+ TM++SS +FAGKAV N+PSSS + G + TMRKT KAK V+SGSPWYG DRV YL Sbjct: 1 MAAATMAISSSSFAGKAV-NVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 59 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 60 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 119 Query: 415 AR 420 AR Sbjct: 120 AR 121 Score = 30.4 bits (67), Expect(2) = 2e-54 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 116 PELFARNGVKFGEAVWF 132
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 199 bits (507), Expect(2) = 4e-54 Identities = 97/122 (79%), Positives = 104/122 (85%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 M ++TM+LSS +FAG AVK PSSS + G + MRKT KAK V+SGSPWYG DRV YL Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 415 AR 420 AR Sbjct: 121 AR 122 Score = 30.8 bits (68), Expect(2) = 4e-54 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 117 PELLARNGVKFGEAVWF 133
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 199 bits (507), Expect(2) = 4e-54 Identities = 100/122 (81%), Positives = 105/122 (86%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA++TM+LSS AFAGKAVK P +S VFG RVTMRKT SGSPWYGSDRV YL Sbjct: 1 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKYL 58 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELL Sbjct: 59 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELL 118 Query: 415 AR 420 AR Sbjct: 119 AR 120 Score = 30.8 bits (68), Expect(2) = 4e-54 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 115 PELLARNGVKFGEAVWF 131
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 198 bits (504), Expect(2) = 9e-54 Identities = 100/122 (81%), Positives = 106/122 (86%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVAS-GSPWYGSDRVLYL 234 MA+ TM+LSS A A SS++FGEAR+TMRKTAAK K AS GSPWYG+DRVLYL Sbjct: 1 MAAATMALSSPVMARAAPST--SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYL 58 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL Sbjct: 59 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 118 Query: 415 AR 420 AR Sbjct: 119 AR 120 Score = 30.8 bits (68), Expect(2) = 9e-54 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 115 PELLARNGVKFGEAVWF 131
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 198 bits (503), Expect(2) = 2e-53 Identities = 97/122 (79%), Positives = 103/122 (84%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA+TTM+LSS +FAGKAVK SSS + G +VTMRKT KAK +S SPWYG DRV YL Sbjct: 1 MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYL 60 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 61 GPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120 Query: 415 AR 420 AR Sbjct: 121 AR 122 Score = 30.0 bits (66), Expect(2) = 2e-53 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NG+KFGEAVWF Sbjct: 117 PELFARNGIKFGEAVWF 133
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 197 bits (501), Expect(2) = 2e-53 Identities = 100/122 (81%), Positives = 106/122 (86%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA++TM+LSS AFAGKAVK P++S V G RVTMRKT AK K SGSPWYGSDRV YL Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 59 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELL Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119 Query: 415 AR 420 AR Sbjct: 120 AR 121 Score = 30.8 bits (68), Expect(2) = 2e-53 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 116 PELLARNGVKFGEAVWF 132
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 196 bits (498), Expect(2) = 4e-53 Identities = 101/122 (82%), Positives = 105/122 (86%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA+ TM+LSS FAGKAVKNL SSS V G+ARV+MRKTAA K GSPWYG DRV YL Sbjct: 1 MAAATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATKKV---GSPWYGPDRVKYL 57 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL Sbjct: 58 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELL 117 Query: 415 AR 420 AR Sbjct: 118 AR 119 Score = 30.8 bits (68), Expect(2) = 4e-53 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 114 PELLARNGVKFGEAVWF 130
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 195 bits (496), Expect(2) = 7e-53 Identities = 99/122 (81%), Positives = 105/122 (86%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA++TM+LSS AFAGKAV P++S V G RVTMRKT AK K SGSPWYGSDRV YL Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 59 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELL Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119 Query: 415 AR 420 AR Sbjct: 120 AR 121 Score = 30.8 bits (68), Expect(2) = 7e-53 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 116 PELLARNGVKFGEAVWF 132
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 195 bits (495), Expect(2) = 1e-52 Identities = 96/122 (78%), Positives = 104/122 (85%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA+ TM+LSS +FAGKAV N+PSSS + +VTMRKT KAK V+SGSPWYG DRV YL Sbjct: 1 MAAATMALSSSSFAGKAV-NVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYL 59 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL Sbjct: 60 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELF 119 Query: 415 AR 420 AR Sbjct: 120 AR 121 Score = 30.4 bits (67), Expect(2) = 1e-52 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 116 PELFARNGVKFGEAVWF 132
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 194 bits (492), Expect(2) = 2e-52 Identities = 97/122 (79%), Positives = 104/122 (85%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSS-SVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA+ TM+LSS +FAG+AVK PS+ + G RV+MRKT AK VAS SPWYG DRV YL Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKP--VASSSPWYGPDRVKYL 58 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 59 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 118 Query: 415 AR 420 AR Sbjct: 119 AR 120 Score = 30.8 bits (68), Expect(2) = 2e-52 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 115 PELLARNGVKFGEAVWF 131
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 192 bits (488), Expect(2) = 6e-52 Identities = 96/122 (78%), Positives = 103/122 (84%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA+ TM+LSS +FAG+AVK PS+S + G R+TMRK A AK S SPWYG DRV YL Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPWYGPDRVKYL 58 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 59 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 118 Query: 415 AR 420 AR Sbjct: 119 AR 120 Score = 30.8 bits (68), Expect(2) = 6e-52 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 115 PELLARNGVKFGEAVWF 131
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 192 bits (488), Expect(2) = 6e-52 Identities = 93/121 (76%), Positives = 100/121 (82%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLG 237 MA++TM++SS A AG +K FGE R+TMRKT K K ASGSPWYG DRV YLG Sbjct: 1 MAASTMAISSTAMAGTPIK----VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLG 56 Query: 238 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 417 P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+ Sbjct: 57 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 116 Query: 418 R 420 R Sbjct: 117 R 117 Score = 30.8 bits (68), Expect(2) = 6e-52 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 112 PELLSRNGVKFGEAVWF 128
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 190 bits (482), Expect(2) = 3e-51 Identities = 97/122 (79%), Positives = 102/122 (83%), Gaps = 1/122 (0%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 MA++TM+LSS A AGKAVK PSSS +FG RV+MRKT K S SPWYG DRV YL Sbjct: 1 MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKTV---KAPVSDSPWYGPDRVKYL 57 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL Sbjct: 58 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 117 Query: 415 AR 420 AR Sbjct: 118 AR 119 Score = 30.8 bits (68), Expect(2) = 3e-51 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 114 PELLARNGVKFGEAVWF 130
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 191 bits (486), Expect(2) = 3e-51 Identities = 91/121 (75%), Positives = 100/121 (82%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLG 237 MA+ TM+++S+A GK + VFGE R+TMRKTAAK K SGSPWYG+DRVLYLG Sbjct: 1 MAAATMAITSRALVGKPAAG--TRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLG 58 Query: 238 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 417 PLSG PPSYLTGEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+ LGCVFPELLA Sbjct: 59 PLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLA 118 Query: 418 R 420 R Sbjct: 119 R 119 Score = 29.3 bits (64), Expect(2) = 3e-51 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGE VWF Sbjct: 114 PELLARNGVKFGEGVWF 130
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 187 bits (475), Expect(2) = 2e-50 Identities = 90/120 (75%), Positives = 99/120 (82%) Frame = +1 Query: 61 ASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGP 240 +S++M+LSS AGK +K PSS G AR TMRK+A K +SGSPWYG DRV YLGP Sbjct: 5 SSSSMALSSPTLAGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGP 64 Query: 241 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 420 SGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+R Sbjct: 65 FSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 124 Score = 30.8 bits (68), Expect(2) = 2e-50 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 119 PELLSRNGVKFGEAVWF 135
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 187 bits (474), Expect(2) = 2e-50 Identities = 94/120 (78%), Positives = 103/120 (85%) Frame = +1 Query: 61 ASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGP 240 A+++M+LSS + AGKAVK PS+ G RV+MRKT K QV+SGSPWYG DRV YLGP Sbjct: 3 AASSMALSSPSLAGKAVKLGPSAPEVG--RVSMRKTVTK--QVSSGSPWYGPDRVKYLGP 58 Query: 241 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 420 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R Sbjct: 59 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 118 Score = 30.8 bits (68), Expect(2) = 2e-50 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 113 PELLSRNGVKFGEAVWF 129
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 183 bits (465), Expect(2) = 3e-49 Identities = 90/123 (73%), Positives = 99/123 (80%), Gaps = 2/123 (1%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNL--PSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLY 231 MA+++M+LSS GK V+ PSS G AR TMRK+A K +SGSPWYG DRV Y Sbjct: 1 MAASSMALSSPTLTGKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKY 60 Query: 232 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 411 LGP SGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPEL Sbjct: 61 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPEL 120 Query: 412 LAR 420 L+R Sbjct: 121 LSR 123 Score = 30.8 bits (68), Expect(2) = 3e-49 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 118 PELLSRNGVKFGEAVWF 134
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 178 bits (452), Expect(2) = 8e-48 Identities = 91/124 (73%), Positives = 95/124 (76%), Gaps = 10/124 (8%) Frame = +1 Query: 79 LSSQAFAGKAVKNLP---------SSSVFGEARVTMRK-TAAKAKQVASGSPWYGSDRVL 228 + S AFAG + +L + V GEARVTMRK T K AS SPWYG DRVL Sbjct: 6 IGSCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVL 65 Query: 229 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 408 YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVFPE Sbjct: 66 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPE 125 Query: 409 LLAR 420 LLAR Sbjct: 126 LLAR 129 Score = 30.8 bits (68), Expect(2) = 8e-48 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 124 PELLARNGVKFGEAVWF 140
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 177 bits (450), Expect(2) = 1e-47 Identities = 87/109 (79%), Positives = 96/109 (88%), Gaps = 1/109 (0%) Frame = +1 Query: 97 AGKAVKNLPSS-SVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTG 273 AG+AVK P++ + G A+ TMRKTA+K+ V+SGSPWYG DRV YLGP SGEPPSYLTG Sbjct: 4 AGQAVKLSPNAPEIQGNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTG 61 Query: 274 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 420 EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R Sbjct: 62 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 110 Score = 30.8 bits (68), Expect(2) = 1e-47 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 105 PELLSRNGVKFGEAVWF 121
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 175 bits (443), Expect(2) = 4e-46 Identities = 84/100 (84%), Positives = 88/100 (88%) Frame = +1 Query: 121 PSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 300 PS+ G RV+MRKTA+K V+SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWD Sbjct: 3 PSTPQLGVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 60 Query: 301 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 420 TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR Sbjct: 61 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 100 Score = 28.5 bits (62), Expect(2) = 4e-46 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEA WF Sbjct: 95 PELLARNGVKFGEASWF 111
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 171 bits (434), Expect(2) = 1e-45 Identities = 91/133 (68%), Positives = 97/133 (72%), Gaps = 12/133 (9%) Frame = +1 Query: 58 MASTTMSL---SSQAFAGKAVKNLPSSS--------VFGEARVTMRKTAAKAKQVAS-GS 201 MA+T S S AFAG + ++ + GEAR+TMRK K AS S Sbjct: 1 MATTMASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDS 60 Query: 202 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 381 PWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAML Sbjct: 61 PWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 120 Query: 382 GALGCVFPELLAR 420 GALGCVFPELLAR Sbjct: 121 GALGCVFPELLAR 133 Score = 30.8 bits (68), Expect(2) = 1e-45 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 128 PELLARNGVKFGEAVWF 144
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 169 bits (429), Expect(2) = 4e-45 Identities = 89/133 (66%), Positives = 97/133 (72%), Gaps = 12/133 (9%) Frame = +1 Query: 58 MASTTMSL---SSQAFAGKAVKNLPSSS--------VFGEARVTMRKTAAKAKQVAS-GS 201 MA+T S S AFAG + ++ + GEAR+TMRK + AS S Sbjct: 1 MATTMASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDS 60 Query: 202 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 381 PWYG DRV+YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAML Sbjct: 61 PWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 120 Query: 382 GALGCVFPELLAR 420 GALGCVFPELLAR Sbjct: 121 GALGCVFPELLAR 133 Score = 30.8 bits (68), Expect(2) = 4e-45 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 128 PELLARNGVKFGEAVWF 144
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 161 bits (407), Expect(2) = 1e-42 Identities = 86/124 (69%), Positives = 94/124 (75%), Gaps = 3/124 (2%) Frame = +1 Query: 58 MASTTMSLSSQAFAG---KAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVL 228 MA++T +L+S F+G K V L GEARV M +KA SGS WYGSDR L Sbjct: 1 MATSTAALTS-TFSGQQLKPVNELSRKVGAGEARVQMMAPKSKAP---SGSIWYGSDRPL 56 Query: 229 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 408 YLGP SG PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE Sbjct: 57 YLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPE 116 Query: 409 LLAR 420 LLA+ Sbjct: 117 LLAK 120 Score = 31.2 bits (69), Expect(2) = 1e-42 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 115 PELLAKNGVKFGEAVWF 131
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 160 bits (405), Expect(2) = 1e-42 Identities = 78/122 (63%), Positives = 90/122 (73%), Gaps = 5/122 (4%) Frame = +1 Query: 70 TMSLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 T ++ AF G+AV + + FGE R+TMR+T A Q S WYG DR YL Sbjct: 3 TCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQ----SIWYGEDRPKYL 58 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L Sbjct: 59 GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEIL 118 Query: 415 AR 420 ++ Sbjct: 119 SK 120 Score = 32.0 bits (71), Expect(2) = 1e-42 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 115 PEILSKNGVKFGEAVWF 131
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 160 bits (406), Expect(2) = 2e-42 Identities = 85/121 (70%), Positives = 94/121 (77%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLG 237 MA++TM+LSS + AG+A+K PS+ G RV+MRKTA K V+SGSPWYG DRV YLG Sbjct: 1 MAASTMALSSSSLAGQAMKLAPSTPELGVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLG 58 Query: 238 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 417 P SGE PSYLTGEF G LSADPETFAKNRELEVIH RWAMLGALGCVFPELLA Sbjct: 59 PFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 110 Query: 418 R 420 R Sbjct: 111 R 111 Score = 30.8 bits (68), Expect(2) = 2e-42 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 106 PELLARNGVKFGEAVWF 122
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 155 bits (392), Expect(2) = 1e-40 Identities = 77/122 (63%), Positives = 87/122 (71%), Gaps = 5/122 (4%) Frame = +1 Query: 70 TMSLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 T ++ AFAG+ + V FG R TMR+T A Q S WYG DR YL Sbjct: 3 TSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQ----SIWYGEDRPKYL 58 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L Sbjct: 59 GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEIL 118 Query: 415 AR 420 ++ Sbjct: 119 SK 120 Score = 29.6 bits (65), Expect(2) = 1e-40 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGV FGEAVWF Sbjct: 115 PEILSKNGVTFGEAVWF 131
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 153 bits (386), Expect(2) = 1e-40 Identities = 76/122 (62%), Positives = 86/122 (70%), Gaps = 5/122 (4%) Frame = +1 Query: 70 TMSLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 T ++ AFAG+ + V F R TMR+T A Q S WYG DR YL Sbjct: 3 TSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQ----SIWYGEDRPKYL 58 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L Sbjct: 59 GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEIL 118 Query: 415 AR 420 ++ Sbjct: 119 SK 120 Score = 32.0 bits (71), Expect(2) = 1e-40 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 115 PEILSKNGVKFGEAVWF 131
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 152 bits (383), Expect(2) = 6e-40 Identities = 79/121 (65%), Positives = 89/121 (73%), Gaps = 4/121 (3%) Frame = +1 Query: 70 TMSLSSQAFAGKAV---KNLPSSSVFGEA-RVTMRKTAAKAKQVASGSPWYGSDRVLYLG 237 T ++ AFAG+ + +N V G RV+MR+T A + S WYG DR YLG Sbjct: 3 TSTIQQSAFAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPE----SIWYGPDRPKYLG 58 Query: 238 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 417 P S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA Sbjct: 59 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118 Query: 418 R 420 + Sbjct: 119 K 119 Score = 31.2 bits (69), Expect(2) = 6e-40 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 114 PELLAKNGVKFGEAVWF 130
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 150 bits (380), Expect(2) = 7e-40 Identities = 76/122 (62%), Positives = 86/122 (70%), Gaps = 5/122 (4%) Frame = +1 Query: 70 TMSLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 T ++ AFAG+ + V G RV+MR+T A S WYG DR YL Sbjct: 3 TSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPT----SIWYGPDRPKYL 58 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE+L Sbjct: 59 GPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEIL 118 Query: 415 AR 420 ++ Sbjct: 119 SK 120 Score = 32.0 bits (71), Expect(2) = 7e-40 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 115 PEILSKNGVKFGEAVWF 131
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 150 bits (378), Expect(2) = 6e-39 Identities = 71/95 (74%), Positives = 77/95 (81%) Frame = +1 Query: 136 FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 315 F RVTMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 2 FEGGRVTMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 57 Query: 316 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 420 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++ Sbjct: 58 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 92 Score = 29.6 bits (65), Expect(2) = 6e-39 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGV FGEAVWF Sbjct: 87 PEILSKNGVTFGEAVWF 103
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 149 bits (376), Expect(2) = 8e-39 Identities = 74/124 (59%), Positives = 88/124 (70%), Gaps = 5/124 (4%) Frame = +1 Query: 64 STTMSLSSQAFAGKAVKNLPSSSVF-----GEARVTMRKTAAKAKQVASGSPWYGSDRVL 228 +T ++ S + AG+ + + + +AR+TMR+T A + S WYG DR Sbjct: 2 ATASAIQSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPE----SIWYGPDRPK 57 Query: 229 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 408 YLGP S PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAMLGALGCVFPE Sbjct: 58 YLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117 Query: 409 LLAR 420 LLA+ Sbjct: 118 LLAK 121 Score = 30.0 bits (66), Expect(2) = 8e-39 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NG+KFGEAVWF Sbjct: 116 PELLAKNGLKFGEAVWF 132
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 148 bits (374), Expect(2) = 1e-38 Identities = 75/122 (61%), Positives = 85/122 (69%), Gaps = 5/122 (4%) Frame = +1 Query: 70 TMSLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 T ++ AF GK + + FG+AR TMR+T A + S WYG DR YL Sbjct: 3 TSAIQQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPE----SIWYGPDRPKYL 58 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPELL Sbjct: 59 GPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELL 118 Query: 415 AR 420 + Sbjct: 119 EK 120 Score = 30.4 bits (67), Expect(2) = 1e-38 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 115 PELLEKNGVKFGEAVWF 131
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 148 bits (373), Expect(2) = 1e-38 Identities = 68/80 (85%), Positives = 71/80 (88%) Frame = +1 Query: 181 KQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 360 K +S SPW+G D V YLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI Sbjct: 4 KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63 Query: 361 HCRWAMLGALGCVFPELLAR 420 H RWAMLGALGCVFPELL+R Sbjct: 64 HSRWAMLGALGCVFPELLSR 83 Score = 30.8 bits (68), Expect(2) = 1e-38 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 78 PELLSRNGVKFGEAVWF 94
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 148 bits (374), Expect(2) = 2e-38 Identities = 79/127 (62%), Positives = 96/127 (75%), Gaps = 5/127 (3%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVK---NLPSSSVFG--EARVTMRKTAAKAKQVASGSPWYGSDR 222 MA+ T ++ S A AG+++ N S V G EARVTMR+T +K+ S + WYG+DR Sbjct: 1 MAAAT-AMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKS--AGSDTIWYGADR 57 Query: 223 VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 402 +LGP SGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ Sbjct: 58 PKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLT 117 Query: 403 PELLART 423 PELLA++ Sbjct: 118 PELLAKS 124 Score = 29.3 bits (64), Expect(2) = 2e-38 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + +GVKFGEAVWF Sbjct: 118 PELLAKSGVKFGEAVWF 134 Score = 28.9 bits (63), Expect = 6.3 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +1 Query: 277 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 393 +PG +D GL+ DP+TFA+ + E+ + R AM G Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 229
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 144 bits (364), Expect(2) = 5e-38 Identities = 68/91 (74%), Positives = 75/91 (82%) Frame = +1 Query: 148 RVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 327 R+TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPE Sbjct: 32 RITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87 Query: 328 TFAKNRELEVIHCRWAMLGALGCVFPELLAR 420 TFA+NRELEVIH RWAMLGALGCVFPE+L++ Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSK 118 Score = 32.0 bits (71), Expect(2) = 5e-38 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 113 PEILSKNGVKFGEAVWF 129
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 144 bits (363), Expect(2) = 3e-37 Identities = 72/119 (60%), Positives = 84/119 (70%), Gaps = 4/119 (3%) Frame = +1 Query: 76 SLSSQAFAGKAVKNLPSSSV----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPL 243 ++ S AFAG+ V + R +MR+T Q S WYG+DR +LGP Sbjct: 5 AIQSSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQ----SIWYGADRPKFLGPF 60 Query: 244 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 420 S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPELL++ Sbjct: 61 SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSK 119 Score = 29.6 bits (65), Expect(2) = 3e-37 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGV+FGEAVWF Sbjct: 114 PELLSKNGVQFGEAVWF 130
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 137 bits (344), Expect = 2e-32 Identities = 71/122 (58%), Positives = 79/122 (64%), Gaps = 2/122 (1%) Frame = +1 Query: 61 ASTTMSLSSQAFAGKAVKNLPSSSV--FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 234 AS+T + + F G+ P V G AR TM S WYG DRV YL Sbjct: 8 ASSTTVVKATPFLGQTKNANPLRDVVAMGSARFTM-----------SNDLWYGPDRVKYL 56 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 GP S + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L Sbjct: 57 GPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVL 116 Query: 415 AR 420 + Sbjct: 117 EK 118 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +1 Query: 277 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 393 +PG +D GL+ DP TFA+ + E+ + R AM G Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 135 bits (341), Expect = 4e-32 Identities = 74/125 (59%), Positives = 85/125 (68%), Gaps = 4/125 (3%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVT--MRKTAAKAK-QVASGSP-WYGSDRV 225 MAST M+ +S+A K P S G A +R AA ++ G+ WYG DRV Sbjct: 1 MASTIMAAASRAVVAKT----PFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRV 56 Query: 226 LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 405 YLGP S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFP Sbjct: 57 KYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFP 116 Query: 406 ELLAR 420 E+L + Sbjct: 117 EVLQK 121 Score = 30.4 bits (67), Expect = 2.2 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +1 Query: 277 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 393 +PG +D GL+ DP TFA+ + E+ + R AM G Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFG 229
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 125 bits (315), Expect(2) = 5e-32 Identities = 57/61 (93%), Positives = 58/61 (95%) Frame = +1 Query: 238 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 417 P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+ Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60 Query: 418 R 420 R Sbjct: 61 R 61 Score = 30.8 bits (68), Expect(2) = 5e-32 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + NGVKFGEAVWF Sbjct: 56 PELLSRNGVKFGEAVWF 72
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 123 bits (308), Expect(2) = 2e-30 Identities = 62/94 (65%), Positives = 73/94 (77%), Gaps = 2/94 (2%) Frame = +1 Query: 148 RVTMRKTAAKAKQV-ASGSPWYGSDRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSAD 321 + T +KTAAKA +SG +YG +R +LGP S P+YLTGEFPGDYGWDTAGLSAD Sbjct: 16 KATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSAD 75 Query: 322 PETFAKNRELEVIHCRWAMLGALGCVFPELLART 423 PETF + RELE+IH RWAMLGALGC PELLA++ Sbjct: 76 PETFKRYRELELIHARWAMLGALGCQTPELLAKS 109 Score = 27.7 bits (60), Expect(2) = 2e-30 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + +G KFGEAVWF Sbjct: 103 PELLAKSGTKFGEAVWF 119
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 125 bits (313), Expect(2) = 5e-30 Identities = 62/95 (65%), Positives = 71/95 (74%) Frame = +1 Query: 142 EARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 321 +A T + AA AK ++G WYG DR +LGP S P+YLTGEFPGDYGWDTAGLSAD Sbjct: 20 KAAGTKQTKAAPAK--SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSAD 77 Query: 322 PETFAKNRELEVIHCRWAMLGALGCVFPELLARTA 426 PETF K RELEVIH RWA+LGALG + PELL+ A Sbjct: 78 PETFKKYRELEVIHARWALLGALGILTPELLSTYA 112 Score = 30.4 bits (67), Expect = 2.2 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = +1 Query: 277 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 393 +PG+ +D GL+ DP+TFA+ + E+ + R AM G Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFG 217 Score = 24.6 bits (52), Expect(2) = 5e-30 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +3 Query: 423 GVKFGEAVWF 452 GVKFGE VWF Sbjct: 113 GVKFGEPVWF 122
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 124 bits (312), Expect(2) = 3e-29 Identities = 67/98 (68%), Positives = 73/98 (74%) Frame = +1 Query: 124 SSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 303 SS++ A TM K AAK+K +S RV YLGP SGE PSYLTGEFPGDYGWDT Sbjct: 30 SSTLIVTAGFTMLKHAAKSKVSSSTC----DRRVKYLGPFSGEWPSYLTGEFPGDYGWDT 85 Query: 304 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 417 AGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ Sbjct: 86 AGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLS 123 Score = 22.7 bits (47), Expect(2) = 3e-29 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = +3 Query: 402 PRVAGPNGVKFGEAVWF 452 P + G FGEAVWF Sbjct: 119 PELLSVMGQGFGEAVWF 135
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 112 bits (279), Expect(2) = 1e-25 Identities = 51/75 (68%), Positives = 62/75 (82%), Gaps = 1/75 (1%) Frame = +1 Query: 205 WYGSDRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 381 +YG DR +LGP S + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92 Query: 382 GALGCVFPELLARTA 426 GALG + PELL++ A Sbjct: 93 GALGILTPELLSQYA 107 Score = 30.0 bits (66), Expect = 2.8 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = +1 Query: 277 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 393 +PG +D GL+ DP+TFA+ + E+ + R AM LG Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLG 214 Score = 23.1 bits (48), Expect(2) = 1e-25 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = +3 Query: 423 GVKFGEAVWF 452 GV+FGE VWF Sbjct: 108 GVQFGEPVWF 117
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 92.4 bits (228), Expect = 5e-19 Identities = 49/88 (55%), Positives = 58/88 (65%) Frame = +1 Query: 154 TMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETF 333 T + A +K +S + +YG D L + P TGEFPGDYGWDTAGLSADPETF Sbjct: 40 TKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETF 98 Query: 334 AKNRELEVIHCRWAMLGALGCVFPELLA 417 + RELE+IH R +LGALG V PELLA Sbjct: 99 KRYRELELIHARCGLLGALGMVTPELLA 126 Score = 32.0 bits (71), Expect = 0.74 Identities = 16/39 (41%), Positives = 25/39 (64%) Frame = +1 Query: 277 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 393 +PG+ +D GL+ DP+TFA+ + E+ + R AM LG Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLG 235
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 81.6 bits (200), Expect = 8e-16 Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Frame = +1 Query: 79 LSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASG------SPWYGSDRVLYL-- 234 L+ +A + + S S F + +K A AK A + WYG DR ++L Sbjct: 14 LNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPD 73 Query: 235 GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 411 G L E P YL GE GDYG+D GL PE FAK + E+IH RWAMLGA G + PE Sbjct: 74 GLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEA 133 Query: 412 L 414 L Sbjct: 134 L 134
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 77.8 bits (190), Expect = 1e-14 Identities = 45/125 (36%), Positives = 64/125 (51%), Gaps = 1/125 (0%) Frame = +1 Query: 49 SIRMASTTMSLSSQAFAGKAVKNLPSSSVFGEA-RVTMRKTAAKAKQVASGSPWYGSDRV 225 S +A+ S S G V +S + G RV+ T A+ + DR Sbjct: 7 SSTIAAVAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRP 66 Query: 226 LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 405 L+ PP +L G PGD+G+D GL++DPE+ N++ E++HCRWAMLGA G P Sbjct: 67 LWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIP 124 Query: 406 ELLAR 420 ELL + Sbjct: 125 ELLTK 129
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 70.5 bits (171), Expect = 2e-12 Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 2/126 (1%) Frame = +1 Query: 49 SIRMASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAK--AKQVASGSPWYGSDR 222 S +A+ S S G V +S G R+ + K A ++ VA + DR Sbjct: 7 SSTIAAVAFSSPSSQKNGSIV-GATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDR 65 Query: 223 VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 402 L+ PP +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G Sbjct: 66 PLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFI 123 Query: 403 PELLAR 420 PE L + Sbjct: 124 PEFLTK 129
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 70.5 bits (171), Expect = 2e-12 Identities = 33/58 (56%), Positives = 40/58 (68%) Frame = +1 Query: 253 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARTA 426 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL A Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLGNGA 437 Score = 68.9 bits (167), Expect = 5e-12 Identities = 31/61 (50%), Positives = 42/61 (68%) Frame = +1 Query: 244 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLART 423 + EPP+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL + Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGKG 252 Query: 424 A 426 A Sbjct: 253 A 253 Score = 60.5 bits (145), Expect = 2e-09 Identities = 28/55 (50%), Positives = 38/55 (69%) Frame = +1 Query: 256 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 420 PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ L + Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGK 66
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 65.9 bits (159), Expect = 5e-11 Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 1/51 (1%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPW 207 MA++TM+LSS FAGKAVK PSSS + G R+TMRKTAAK K +SGSPW Sbjct: 1 MAASTMALSSSTFAGKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 64.7 bits (156), Expect = 1e-10 Identities = 33/51 (64%), Positives = 39/51 (76%), Gaps = 1/51 (1%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPW 207 MA++TM+LSS FAGK VK PSSS + G R+TMRKTAAK K +SGSPW Sbjct: 1 MAASTMALSSSTFAGKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 64.3 bits (155), Expect = 1e-10 Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 1/59 (1%) Frame = +1 Query: 241 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 414 + G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE L Sbjct: 50 MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL 108
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 62.8 bits (151), Expect = 4e-10 Identities = 27/59 (45%), Positives = 40/59 (67%) Frame = +1 Query: 250 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARTA 426 +PP++LTGE+P D G+D ++ADP +A+ R EV H R +ML +G + PELL + A Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGKGA 225 Score = 33.5 bits (75), Expect = 0.26 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +1 Query: 322 PETFAKNRELEVIHCRWAMLGALGCVFPELL 414 P + + R EV + R AML +GCV+PELL Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVGCVYPELL 31
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 57.0 bits (136), Expect = 2e-08 Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 7/128 (5%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAK-AKQVASGSPWYGSDRVLYL 234 ++S+++S S++A A + + + S SV +A +R + KQ A+ W+ S + L Sbjct: 7 ISSSSISTSAEA-ARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQLWFASKQSL-- 63 Query: 235 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGC 396 SYL G PGD+G+D GLS DPE F + + L EVI+ R+AMLGA G Sbjct: 64 --------SYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGA 114 Query: 397 VFPELLAR 420 + PE+L + Sbjct: 115 IAPEILGK 122
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 54.7 bits (130), Expect = 1e-07 Identities = 24/55 (43%), Positives = 33/55 (60%) Frame = +1 Query: 256 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 420 P YLTG GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTK 118
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 54.7 bits (130), Expect = 1e-07 Identities = 33/90 (36%), Positives = 41/90 (45%) Frame = +1 Query: 124 SSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 303 +S V T RK A A W + + G + P +L G PGD+G+D Sbjct: 33 NSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVK----GGGNFLDPEWLDGSLPGDFGFDP 88 Query: 304 AGLSADPETFAKNRELEVIHCRWAMLGALG 393 GL DP RE E+IH RWAML LG Sbjct: 89 LGLGKDPAFLKWYREAELIHGRWAMLAVLG 118
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 53.1 bits (126), Expect = 3e-07 Identities = 24/46 (52%), Positives = 27/46 (58%) Frame = +1 Query: 256 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 393 P +L G PGDYG+D GL DP RE E+IH RWAM LG Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 51.6 bits (122), Expect = 9e-07 Identities = 23/46 (50%), Positives = 27/46 (58%) Frame = +1 Query: 256 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 393 P +L G PGD+G+D GL DP RE E+IH RWAM LG Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 50.8 bits (120), Expect = 2e-06 Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 1/51 (1%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPW 207 MA+ TM+LSS +FAG+AVK PS+S + G R+TMRK A AK S SPW Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPW 49
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 47.0 bits (110), Expect = 2e-05 Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 1/51 (1%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSSV-FGEARVTMRKTAAKAKQVASGSPW 207 MA+ M+LSS +FAG+AVK PS+S G R+TMRK A AK S SPW Sbjct: 1 MAAAAMALSSPSFAGQAVKLSPSASENSGNGRITMRK--AVAKSAPSSSPW 49
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 44.3 bits (103), Expect = 1e-04 Identities = 45/165 (27%), Positives = 60/165 (36%), Gaps = 47/165 (28%) Frame = +1 Query: 61 ASTTMSLSSQAFAGKAVKNLPSSSVFGEARV---TMRKTAAKAKQVASGSP-WYGSDRVL 228 A++T + +S + V ++ S+S AR T + + KAK V S P W+ Sbjct: 3 ATSTAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKTVISDRPLWFPG---- 58 Query: 229 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN----------- 342 + P YL G GDYG+D GL E AKN Sbjct: 59 ------AKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTE 112 Query: 343 ---------------------RELEVIHCRWAMLGALGCVFPELL 414 RE E+IH RWAML LG + E L Sbjct: 113 AVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWL 157 Score = 33.5 bits (75), Expect = 0.26 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 223 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 393 VL +G + + + L E +PG +D GL++DP A+ + E+ H R AM+G LG Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 38.1 bits (87), Expect = 0.010 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +1 Query: 232 LGPLSGEPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 405 + P +G+ S L G PGD G+D GL+ +DP+ F +E E+ H R AM+ A G + Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191 Query: 406 ELLA 417 E ++ Sbjct: 192 EAVS 195
>CDAN1_HUMAN (Q8IWY9) Codanin-1| Length = 1226 Score = 36.6 bits (83), Expect = 0.030 Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 6/82 (7%) Frame = -3 Query: 439 SPNFTPFGPATRGRRSRALQAWPNGSGSPPARGSWRRSR------GQQTTQQCPNRSRQG 278 S P GP T + A A P G PP RS+ Q T + P +R+G Sbjct: 61 SSRVLPQGPPTPAKTPGASAALPGRPGGPPRGSRGARSQLFPPTEAQSTAAEAP-LARRG 119 Query: 277 THRSGSSGAHQKAGRGRAHGQS 212 R G A ++ GRG G S Sbjct: 120 GRRRGPGPARERGGRGLEEGVS 141
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 36.6 bits (83), Expect = 0.030 Identities = 45/172 (26%), Positives = 59/172 (34%), Gaps = 49/172 (28%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYG------SD 219 MA+TT + +S F + P G RV R + K+ + P D Sbjct: 1 MATTTAAAASGIFGIRIQDPRP-----GTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGD 55 Query: 220 RVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN-------- 342 R+++ PP +L G GD G+D GL E AKN Sbjct: 56 RLVWFP--GANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGI 113 Query: 343 ------------------------RELEVIHCRWAMLGALGCVFPELLARTA 426 RE E+IH RWAMLG LG + E L A Sbjct: 114 IQESSEIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIA 165 Score = 30.8 bits (68), Expect = 1.7 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = +1 Query: 223 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 390 VL +G + + S L E +PG Y +D GL+ADPE + E+ H R AM+ L Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 36.6 bits (83), Expect = 0.030 Identities = 38/136 (27%), Positives = 49/136 (36%), Gaps = 43/136 (31%) Frame = +1 Query: 136 FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 315 FG+ + +K+A K V + P + Y G +S P +L G GDYG+D GL Sbjct: 36 FGKKKAAPKKSAKKT--VTTDRPLW------YPGAIS---PDWLDGSLVGDYGFDPFGLG 84 Query: 316 ADPE-----------TFAKN--------------------------------RELEVIHC 366 E AKN RE E+IH Sbjct: 85 KPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHG 144 Query: 367 RWAMLGALGCVFPELL 414 RWAML LG + E L Sbjct: 145 RWAMLATLGALSVEWL 160 Score = 35.4 bits (80), Expect = 0.067 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 223 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 393 VL +G + + + L E +PG +D GL+ADPE A+ + E+ H R AM+ LG Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255
>CWC22_DEBHA (Q6BU84) Pre-mRNA-splicing factor CWC22| Length = 637 Score = 34.3 bits (77), Expect = 0.15 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%) Frame = -3 Query: 415 PATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSR-QGTHRSGSSGAHQKA 239 P RGR + +GS S S+ RS G + + +RSR + R+GS G Sbjct: 541 PEERGRSRSVSGSSRSGSSSYSRSRSYSRSSGSYSRSRSRSRSRSRSRSRTGSRGRTMSR 600 Query: 238 GRGRAHGQSRTTGCRRQPAWPLPP 167 R ++ +SR+T R ++ P Sbjct: 601 DRSKSFSRSRSTSRSRGESFSRSP 624
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 33.5 bits (75), Expect = 0.26 Identities = 28/96 (29%), Positives = 32/96 (33%), Gaps = 45/96 (46%) Frame = +1 Query: 256 PSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 342 P +L G PGD G+D GLS E AKN Sbjct: 59 PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118 Query: 343 --------------RELEVIHCRWAMLGALGCVFPE 408 RE E+IH RWAML LG + E Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE 154
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 33.5 bits (75), Expect = 0.26 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 9/63 (14%) Frame = -3 Query: 370 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 218 +GSGS + G S + SRG++ + SR G H SGS S H + G G H Sbjct: 2123 HGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHS 2182 Query: 217 QSR 209 SR Sbjct: 2183 PSR 2185 Score = 31.6 bits (70), Expect = 0.97 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3 Query: 370 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 218 +GSGS + G S + SRG++ + S G H SGS S H + G G H Sbjct: 1183 HGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHS 1242 Query: 217 QSR 209 SR Sbjct: 1243 PSR 1245 Score = 30.4 bits (67), Expect = 2.2 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3 Query: 370 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 218 +GSGS + G S + SRG++ + SR G H SGS S H + G G Sbjct: 1653 HGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQS 1712 Query: 217 QSR 209 SR Sbjct: 1713 PSR 1715 Score = 30.4 bits (67), Expect = 2.2 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 10/73 (13%) Frame = -3 Query: 367 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGT----------HRSGSSGAHQKAGRGRAHG 218 GSGS + G R G + Q P+R R G+ H SGS + G G Sbjct: 1340 GSGSSQSSGYGRHGAG---SGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSG 1396 Query: 217 QSRTTGCRRQPAW 179 QS G +W Sbjct: 1397 QSSGFGHHESSSW 1409 Score = 30.0 bits (66), Expect = 2.8 Identities = 19/64 (29%), Positives = 23/64 (35%) Frame = -3 Query: 370 NGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 191 +GSG P+RG G S G H SGS + G GQS G Sbjct: 2294 SGSGQSPSRGRHGSGSGHS--------SSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHE 2345 Query: 190 QPAW 179 +W Sbjct: 2346 SSSW 2349 Score = 30.0 bits (66), Expect = 2.8 Identities = 19/64 (29%), Positives = 23/64 (35%) Frame = -3 Query: 370 NGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 191 +GSG P+RG G S G H SGS + G GQS G Sbjct: 1824 SGSGQSPSRGRHGSGSGHS--------SSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHE 1875 Query: 190 QPAW 179 +W Sbjct: 1876 SSSW 1879 Score = 29.3 bits (64), Expect = 4.8 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 9/63 (14%) Frame = -3 Query: 370 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 218 +GSGS + G S + SR +Q S G H SGS S H + G G H Sbjct: 716 HGSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHS 775 Query: 217 QSR 209 SR Sbjct: 776 PSR 778 Score = 28.5 bits (62), Expect = 8.2 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 9/63 (14%) Frame = -3 Query: 370 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 218 +GSGS + G S + SRG++ + S G H SGS S H + G G Sbjct: 2593 HGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQS 2652 Query: 217 QSR 209 SR Sbjct: 2653 PSR 2655 Score = 28.5 bits (62), Expect = 8.2 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 6/89 (6%) Frame = -3 Query: 448 QTASPNFTPFGPATRGR-RSRALQAWPNGSGSPPARGSWRRSRGQQTT-----QQCPNRS 287 ++ S + + FG G S A +GSG ++G + GQ +T S Sbjct: 2215 ESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSS 2274 Query: 286 RQGTHRSGSSGAHQKAGRGRAHGQSRTTG 200 G H SGSS + +G GQS + G Sbjct: 2275 SHGQHGSGSSQSSSYGQQGSGSGQSPSRG 2303 Score = 28.5 bits (62), Expect = 8.2 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 6/89 (6%) Frame = -3 Query: 448 QTASPNFTPFGPATRGR-RSRALQAWPNGSGSPPARGSWRRSRGQQTT-----QQCPNRS 287 ++ S + + FG G S A +GSG ++G + GQ +T S Sbjct: 1745 ESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSS 1804 Query: 286 RQGTHRSGSSGAHQKAGRGRAHGQSRTTG 200 G H SGSS + +G GQS + G Sbjct: 1805 SHGQHGSGSSQSSSYGQQGSGSGQSPSRG 1833
>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 33.1 bits (74), Expect = 0.33 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 9/112 (8%) Frame = +1 Query: 61 ASTTMSLSSQAFAGKAVKNLPSSSVFGE--------ARVTMRKTAAKAKQVASGS-PWYG 213 +++ M LS A + P+ VF E A +R T + + S PW+G Sbjct: 72 SNSDMYLSPVAMFRDPFRKEPNKLVFCEVFKYNQKPAETNLRHTCKRIMDMVSNQHPWFG 131 Query: 214 SDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 369 ++ L G P + + FPG G G+ AD A R++ H R Sbjct: 132 MEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGADK---AYRRDIMEAHYR 180
>VE2_HPV09 (P36780) Regulatory protein E2| Length = 461 Score = 33.1 bits (74), Expect = 0.33 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Frame = -3 Query: 415 PATRGRRSRALQAWPNGSGSPPA-RGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKA 239 P TR +R R + G G R RS+G+ T++ R R+G S S Sbjct: 251 PTTRKKRQRQGEGEGEGEGEETNYRRQRSRSKGRTETERGGERRRRGRSSSADSTTPTDR 310 Query: 238 GRGRAHGQSRTT 203 RGR G+ TT Sbjct: 311 RRGRGGGRGPTT 322
>VE2_BPV4 (P08345) Regulatory protein E2| Length = 334 Score = 33.1 bits (74), Expect = 0.33 Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 9/91 (9%) Frame = -3 Query: 412 ATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSR-QGTHRSGSSGAHQKAG 236 +T G+R G P R S R +RG+Q Q +RSR + RS + G H Sbjct: 133 STGGQRGTQTGDHARGRSRPSPRSS-RDARGRQQRAQSSSRSRSRSRSRSPTKGPHSSGR 191 Query: 235 RGRAHGQSRTTGCRRQ--------PAWPLPP 167 R R G RR+ P P PP Sbjct: 192 DTRLPSPGRPPGGRRRGTPERERCPGTPTPP 222
>SMUF1_DROME (Q9V853) E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Smad| ubiquitination regulatory factor 1 homolog) (DSmurf) (Lethal with a checkpoint kinase protein) Length = 1061 Score = 32.7 bits (73), Expect = 0.44 Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 15/106 (14%) Frame = -3 Query: 439 SPNFTP---FGPATRGR-RSRALQAWPNGSG--------SPPARGSWRRSRGQQTTQQCP 296 +PN +P P+ G S + P GSG + P + S RRS QQ + Sbjct: 412 TPNISPPASVTPSANGNVHSPNANSTPAGSGGGSRSYTAATPGQRSQRRSSRQQGEESST 471 Query: 295 -NRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRR--QPAWPLPP 167 RS +GT G+SG G G+ + + + +P LPP Sbjct: 472 RRRSSRGTRNGGTSGGGGGGGSGQRYASAAIAAANQAARPFLDLPP 517
>MTC1_COREQ (P42828) Modification methylase CeqI (EC 2.1.1.72)| (Adenine-specific methyltransferase CeqI) (M.CeqI) Length = 517 Score = 32.7 bits (73), Expect = 0.44 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Frame = -3 Query: 355 PPARGSWRRSRGQQTTQQCPNRSRQGTHR---SGSSGAHQKAGRGRAHGQS-RTTGCRRQ 188 P RG W R + + P R R+ R G + A + GR HG+S R TG R Q Sbjct: 13 PRGRGRWPRLSRRSGCLEVPGRPRRPFLRPTVPGPTSARPRRGRA-PHGRSTRCTGWRVQ 71 Query: 187 PAWPLPPF 164 ++ PPF Sbjct: 72 LSFSCPPF 79
>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 32.7 bits (73), Expect = 0.44 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +1 Query: 139 GEARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 315 G A +R T + + S PW+G ++ L G P + + FPG G G+ Sbjct: 107 GPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVG 166 Query: 316 ADPETFAKNRELEVIHCR 369 AD A R++ H R Sbjct: 167 ADR---AYGRDIVEAHYR 181
>SFRS4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4 (Pre-mRNA-splicing| factor SRP75) (SRP001LB) Length = 494 Score = 32.7 bits (73), Expect = 0.44 Identities = 21/71 (29%), Positives = 31/71 (43%) Frame = -3 Query: 418 GPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKA 239 G GR+ R ++ P R S+ RSR ++ SR+ RSGSS + Sbjct: 162 GTEVNGRKIRLVEDKPGSR----RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSK 217 Query: 238 GRGRAHGQSRT 206 R R+ SR+ Sbjct: 218 SRSRSRSGSRS 228
>EP84_HCMVA (P17151) Early phosphoprotein p84| Length = 684 Score = 32.3 bits (72), Expect = 0.57 Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 5/85 (5%) Frame = -3 Query: 451 NQTASPNFTPFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTH 272 + ++S P P + GRR RA G G R S R++ ++ +R R H Sbjct: 572 SSSSSAPLPPPPPPSGGRRGRARNNTRGGGGGGGGRNSRRQAASSSSSSSRRSRRRNNRH 631 Query: 271 RSGSSG-----AHQKAGRGRAHGQS 212 Q AG GR G S Sbjct: 632 EDEEDNDPLLRLSQVAGNGRRRGPS 656
>HORN_MOUSE (Q8VHD8) Hornerin| Length = 2496 Score = 32.3 bits (72), Expect = 0.57 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -3 Query: 367 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 224 GSGS R S +SRG+ T+++ R G+ GSSG Q ++G+GR+ Sbjct: 1815 GSGS---RNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGRSGQGRS 1860 Score = 32.3 bits (72), Expect = 0.57 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -3 Query: 367 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 224 GSGS R S +SRG+ T+++ R G+ GSSG Q ++G+GR+ Sbjct: 1467 GSGS---RNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGRSGQGRS 1512 Score = 32.3 bits (72), Expect = 0.57 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -3 Query: 367 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 224 GSGS R S +SRG+ T+++ R G+ GSSG Q ++G+GR+ Sbjct: 1119 GSGS---RNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGRSGQGRS 1164 Score = 32.3 bits (72), Expect = 0.57 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -3 Query: 367 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 224 GSGS R S +SRG+ T+++ R G+ GSSG Q ++G+GR+ Sbjct: 770 GSGS---RNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGRSGQGRS 815 Score = 29.6 bits (65), Expect = 3.7 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 11/78 (14%) Frame = -3 Query: 400 RRSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGS---SGAHQ 245 R S Q + +GSG S G R SRG Q S + H+SGS SG+ Q Sbjct: 2351 RESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRSQHQSGSRHGSGSGQ 2410 Query: 244 ---KAGRGRAHGQSRTTG 200 +G HG S ++G Sbjct: 2411 FPISGQQGSHHGHSSSSG 2428 Score = 29.6 bits (65), Expect = 3.7 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 11/78 (14%) Frame = -3 Query: 400 RRSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGS---SGAHQ 245 R S Q + +GSG S G R SRG Q S + H+SGS SG+ Q Sbjct: 2180 RESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRSQHQSGSRHGSGSGQ 2239 Query: 244 ---KAGRGRAHGQSRTTG 200 +G HG S ++G Sbjct: 2240 FPISGQQGSHHGHSSSSG 2257 Score = 29.6 bits (65), Expect = 3.7 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 11/78 (14%) Frame = -3 Query: 400 RRSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGS---SGAHQ 245 R S Q + +GSG S G R SRG Q S + H+SGS SG+ Q Sbjct: 2009 RESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRSQHQSGSRHGSGSGQ 2068 Query: 244 ---KAGRGRAHGQSRTTG 200 +G HG S ++G Sbjct: 2069 FPISGQQGSHHGHSSSSG 2086 Score = 29.6 bits (65), Expect = 3.7 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 11/78 (14%) Frame = -3 Query: 400 RRSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGS---SGAHQ 245 R S Q + +GSG S G R SRG Q S + H+SGS SG+ Q Sbjct: 1313 RESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRNQHQSGSRHGSGSGQ 1372 Query: 244 ---KAGRGRAHGQSRTTG 200 +G HG S ++G Sbjct: 1373 FPISGQQGSHHGHSSSSG 1390 Score = 29.6 bits (65), Expect = 3.7 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 11/78 (14%) Frame = -3 Query: 400 RRSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGS---SGAHQ 245 R S Q + +GSG S G R SRG Q S + H+SGS SG+ Q Sbjct: 965 RESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRSQHQSGSRHGSGSGQ 1024 Query: 244 ---KAGRGRAHGQSRTTG 200 +G HG S ++G Sbjct: 1025 FPISGQQGSHHGHSSSSG 1042 Score = 29.6 bits (65), Expect = 3.7 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 11/78 (14%) Frame = -3 Query: 400 RRSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGS---SGAHQ 245 R S Q + +GSG S G R SRG Q S + H+SGS SG+ Q Sbjct: 616 RESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRSQHQSGSRHGSGSGQ 675 Query: 244 ---KAGRGRAHGQSRTTG 200 +G HG S ++G Sbjct: 676 FPISGQQGSHHGHSSSSG 693 Score = 28.9 bits (63), Expect = 6.3 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = -3 Query: 418 GPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-K 242 G + R ++ + GSGS R S +SRG+ T+++ R G+ SSG Q Sbjct: 1279 GQTSGCRSGQSTRYGGQGSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGG 1335 Query: 241 AGRGRA 224 +G+GR+ Sbjct: 1336 SGQGRS 1341 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 367 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 224 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 2334 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 2379 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 367 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 224 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 2163 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 2208 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 367 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 224 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 1992 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 2037 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 367 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 224 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 948 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 993 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 367 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 224 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 599 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 644
>TTC16_MACFA (Q95LZ5) Tetratricopeptide repeat protein 16 (TPR repeat protein| 16) Length = 872 Score = 32.0 bits (71), Expect = 0.74 Identities = 19/92 (20%), Positives = 42/92 (45%) Frame = -3 Query: 346 RGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLPP 167 R S +++ Q+ +Q ++++ HR SS G+GR ++ T +RQ + + Sbjct: 691 RQSLSKTQATQSQRQNFSKTKAAAHRRNSSKTKATQGQGRRSSKTEATQGQRQSSSEIET 750 Query: 166 FCAW*REPHQKQTMMASSSLPCRQRLGKRATW 71 +EP + +T + P + + + +W Sbjct: 751 SQGPRQEPSKTKTTRSPRQRPRKVKAARGRSW 782
>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.6 bits (70), Expect = 0.97 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 9/112 (8%) Frame = +1 Query: 61 ASTTMSLSSQAFAGKAVKNLPSSSVFGE--------ARVTMRKTAAKAKQVASGS-PWYG 213 +++ M LS A + P+ VF E A +R + + + S PW+G Sbjct: 72 SNSDMYLSPVAMFRDPFRKEPNKLVFCEVFKYNRKPAETNLRHSCKRIMDMVSNQHPWFG 131 Query: 214 SDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 369 ++ L G P + + FPG G G+ AD A R++ H R Sbjct: 132 MEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180
>PQQF_PSEPK (Q88QV3) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)| (Pyrroloquinoline quinone biosynthesis protein F) Length = 766 Score = 31.6 bits (70), Expect = 0.97 Identities = 21/56 (37%), Positives = 28/56 (50%) Frame = -1 Query: 276 LTGQVARGLTRKRAEVEHTVRAVPRAAGGNLLGLCRRFAHGDASLTKNRR*WQVLH 109 L GQV TR+RA + P A GG L LC+ A D + + RR +V+H Sbjct: 75 LGGQV-NASTRERA-TDFFFEVPPNALGGGLERLCQMLAEPDLGIERQRREREVIH 128
>VE2_HPV25 (P36787) Regulatory protein E2| Length = 502 Score = 31.6 bits (70), Expect = 0.97 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Frame = -3 Query: 412 ATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPN-RSRQGTHRSGSSGAHQKAG 236 ATRGR G GSP S R +R TT + RS++ R+GSS + G Sbjct: 312 ATRGR----------GPGSPTTTTSDRAARSPSTTSSATSQRSQRSRSRAGSSRGGRGRG 361 Query: 235 RGRAHGQSRTTGCRR 191 R H S + +R Sbjct: 362 GRRRHRLSESPTSKR 376 Score = 31.6 bits (70), Expect = 0.97 Identities = 35/109 (32%), Positives = 43/109 (39%) Frame = -3 Query: 406 RGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGR 227 R RRSR+ + S S S RSR + +Q RSR + R S A RGR Sbjct: 263 RQRRSRSKSRSRSRSQSRSRIRSRSRSRSRSESQSSKRRSRSRSRRKTS------ATRGR 316 Query: 226 AHGQSRTTGCRRQPAWPLPPFCAW*REPHQKQTMMASSSLPCRQRLGKR 80 G TT R P A + Q+ A SS R R G+R Sbjct: 317 GPGSPTTTTSDRAARSPSTTSSAT-SQRSQRSRSRAGSSRGGRGRGGRR 364
>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.2 bits (69), Expect = 1.3 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +1 Query: 145 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 321 A +R T + + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 322 PETFAKNRELEVIHCR 369 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.2 bits (69), Expect = 1.3 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +1 Query: 145 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 321 A +R T + + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 322 PETFAKNRELEVIHCR 369 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) Length = 392 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +1 Query: 145 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 321 A +R T K ++ + PW+G ++ L ++G P + FPG G G+ AD Sbjct: 109 AETNLRHTCKKIMEMVNDHRPWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168
>Y1711_VIBCH (Q9KRD1) UPF0313 protein VC1711| Length = 789 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/70 (27%), Positives = 34/70 (48%) Frame = -3 Query: 394 SRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQ 215 +++ Q P GS ++ + + G Q+ + NR +QG S + G Q +GR + G Sbjct: 721 NKSNQGKPAGSKPTGSKPTANKPAGNQSARSEQNRGQQGQRGSATGGKPQGSGRPASRGN 780 Query: 214 SRTTGCRRQP 185 + +RQP Sbjct: 781 T-----QRQP 785
>YR705_MIMIV (Q5UNW3) Hypothetical protein R705| Length = 313 Score = 31.2 bits (69), Expect = 1.3 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 5/74 (6%) Frame = -3 Query: 406 RGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNR-----SRQGTHRSGSSGAHQK 242 R SR+ + +GS S +R S RS G +T+ + S RSGSSG+ K Sbjct: 208 RSTSSRSSGSRSSGSRSSGSRSSGSRSTGSKTSSRSSGSKTSRSSGSSRSRSGSSGS--K 265 Query: 241 AGRGRAHGQSRTTG 200 +GR R + +S T+G Sbjct: 266 SGRSR-NSRSGTSG 278
>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.8 bits (68), Expect = 1.7 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +1 Query: 187 VASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 366 V+S PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 367 R 369 R Sbjct: 180 R 180
>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.8 bits (68), Expect = 1.7 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +1 Query: 145 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 321 A +R T + + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 322 PETFAKNRELEVIHCR 369 A R++ H R Sbjct: 168 R---AYGRDIVEAHYR 180
>IF2_STIAU (P55875) Translation initiation factor IF-2| Length = 1054 Score = 30.8 bits (68), Expect = 1.7 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = -3 Query: 415 PATRGRRSRALQAWPN-GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKA 239 P+T GR AWP+ GS A G+ R S G + R R + R+ +A Sbjct: 252 PSTSGR----WHAWPSRGSSGRFAHGAGRPS-GWTFARWTSGRPRAASRRTAVQRPSGRA 306 Query: 238 GRGRAHGQSRTTG 200 G G +HG R G Sbjct: 307 GAGASHGLQRRKG 319
>MECT1_MOUSE (Q68ED7) Mucoepidermoid carcinoma translocated protein 1 homolog| Length = 630 Score = 30.8 bits (68), Expect = 1.7 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Frame = -3 Query: 439 SPNFTPFGPATRGRRSRALQAWPNGSG--SPPARGSWRRSRGQQTTQQCP-NRSRQGTHR 269 SP+ P GR++ + P G+ SPPA SWRR+ Q S+ + Sbjct: 113 SPHRRPLSVDKHGRQA---DSCPYGTVYLSPPADTSWRRTNSDSALHQSTMTPSQAESFT 169 Query: 268 SGSSGAHQK 242 GS AHQK Sbjct: 170 GGSQDAHQK 178
>SFRS4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4| Length = 489 Score = 30.8 bits (68), Expect = 1.7 Identities = 20/71 (28%), Positives = 30/71 (42%) Frame = -3 Query: 418 GPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKA 239 G GR+ R ++ P R S+ RSR ++ SR+ RSGSS + Sbjct: 162 GTEVNGRKIRLVEDKPGSR----RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSK 217 Query: 238 GRGRAHGQSRT 206 R R+ S + Sbjct: 218 SRSRSRSGSHS 228
>HSP1_ISOMA (P42136) Sperm protamine P1| Length = 66 Score = 30.8 bits (68), Expect = 1.7 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Frame = -3 Query: 349 ARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHG--QSRTTGCRRQ 188 +R +RR RG+++ R R R G S ++ G+GRAH + R +G RR+ Sbjct: 10 SRSRFRRRRGRRS------RVRGRDARQGRSSRRRRRGKGRAHSGKKGRRSGSRRR 59
>U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor| 50 kDa subunit) (U2 snRNP auxiliary factor large subunit) Length = 416 Score = 30.4 bits (67), Expect = 2.2 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -3 Query: 274 HRSGSSGAHQKAGRGRAHGQSRTTGCRRQPA--WPLPPFCAW*REPHQKQTMMASSSLP 104 HRS S H++ R R H ++ RR+P+ W +PP P Q + M AS +P Sbjct: 15 HRSRSRDRHRERSRDRRHHRN----SRRKPSLYWDVPPPGFEHITPMQYKAMQASGQIP 69
>NPCL1_HUMAN (Q9UHC9) Niemann-Pick C1-like protein 1 precursor| Length = 1359 Score = 30.4 bits (67), Expect = 2.2 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +1 Query: 13 IPNSWSTQTGPPSIRMAS-TTMSLSSQAFAGKAVKNLPSSSVFGEARVTM 159 I S++ T P + A T+S+ S FAG A+ NLP V G A+ + Sbjct: 1212 ITRSFAISTKPTWLERAKEATISMGSAVFAGVAMTNLPGILVLGLAKAQL 1261
>VE2_HPV05 (P06921) Regulatory protein E2| Length = 514 Score = 30.4 bits (67), Expect = 2.2 Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 17/100 (17%) Frame = -3 Query: 451 NQTASPNFTPFGPATRGRRSRALQAWPNGSGSPPA-------RGSWRRSRGQQTTQQCPN 293 +QT + T +T ++RAL + G P R RRSR T+ C Sbjct: 284 SQTHTTRSTTRSRSTSLTKTRALTSRSRSRGRSPTTCRRGGGRSPRRRSRSPSTSSSCTT 343 Query: 292 RSRQ----------GTHRSGSSGAHQKAGRGRAHGQSRTT 203 + Q G S S + GRGR G+S ++ Sbjct: 344 QRSQRARAESSTTRGARGSRGSRGGSRGGRGRRRGRSSSS 383 Score = 29.3 bits (64), Expect = 4.8 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Frame = -3 Query: 448 QTASPNFTPFGPATRGRRSRALQAWPNGS-GSPPARGSWRRSRGQQTTQQCPNRSRQGTH 272 ++ SP+ + R +R+RA + G+ GS +RG R RG+ R+G Sbjct: 331 RSRSPSTSSSCTTQRSQRARAESSTTRGARGSRGSRGGSRGGRGR----------RRGRS 380 Query: 271 RSGSSGAHQKAGRGRA 224 S SS AH+++ G A Sbjct: 381 SSSSSPAHKRSRGGSA 396
>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) (Clk4-associating SR-related protein) Length = 653 Score = 30.4 bits (67), Expect = 2.2 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = -3 Query: 415 PATRGR-RSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKA 239 P R R RSR+ + G+ P S S + + P+RSR T RSGS + Sbjct: 444 PRRRSRSRSRSGDRYKRGARGPRHHSS---SHSRSSWSLSPSRSRSVT-RSGSRSQSRSR 499 Query: 238 GRGRAHGQSRT 206 R ++H QS++ Sbjct: 500 SRSQSHSQSQS 510
>GLNA_HEBCY (Q96UV5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 30.4 bits (67), Expect = 2.2 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +1 Query: 148 RVTMRKTAAKA-KQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 294 R R AAK +Q PW+G ++ L G P + G FPG G Sbjct: 105 RTNFRHHAAKVMEQAKEDVPWFGLEQEYTLFDADGSPYGWPKGGFPGPQG 154
>VE2_HPV47 (P22420) Regulatory protein E2| Length = 506 Score = 30.0 bits (66), Expect = 2.8 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Frame = -3 Query: 409 TRGR-RSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGR 233 TR R RSR+ + + RGS R R + + RSR+G R G +AG Sbjct: 301 TRARSRSRSTSRSTSTTSRRGGRGSSTRQRSRSPSTYTSKRSREGNTRGRGRGRQGRAGS 360 Query: 232 GRAHGQSR 209 Q R Sbjct: 361 SGGREQRR 368
>ARP8_SCHPO (Q9US07) Probable actin-related protein 8| Length = 620 Score = 30.0 bits (66), Expect = 2.8 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = -1 Query: 429 SRRSGQQLGEDAAERSKHGP-----TAVDHLQLAVLGEGLGVSRQPSSVPTVVARELTGQ 265 S++S + ED E S+ G T V H+ L GL ++ P++VP V+AR++ Sbjct: 30 SKKSQVEEEEDGIEESELGEEKDNKTIVLHIGSQNLRIGLASNKTPTTVPMVIARKMRAP 89 Query: 264 VAR 256 A+ Sbjct: 90 FAQ 92
>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)| Length = 1206 Score = 30.0 bits (66), Expect = 2.8 Identities = 20/74 (27%), Positives = 37/74 (50%) Frame = -2 Query: 425 AVRASNSGKTQPSAPSMAQRQWITSSSRFLAKVSGSADNPAVSQP*SPGNSPVR*LGGSP 246 A ++S+S S P Q+Q ++S++ S S+ N + ++ SP N+ R +GG+ Sbjct: 234 APKSSSSSGGSNSTPQQQQQQLVSSNN------SSSSSNNSFTKASSPNNNGARSVGGAA 287 Query: 245 ESGPR*STRSEPYH 204 S +T + H Sbjct: 288 TSAATGTTAAAGSH 301
>MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated protein 1| (Transducer of regulated cAMP response element-binding protein 1) (Transducer of CREB protein 1) Length = 634 Score = 30.0 bits (66), Expect = 2.8 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Frame = -3 Query: 439 SPNFTPFGPATRGRRSRALQAWPNGSG--SPPARGSWRRSRGQQTTQQCPNRSRQ-GTHR 269 SP+ P GR++ + P G+ SPPA SWRR+ Q Q + Sbjct: 113 SPHRRPLSVDKHGRQA---DSCPYGTMYLSPPADTSWRRTNSDSALHQSTMTPTQPESFS 169 Query: 268 SGSSGAHQK 242 SGS HQK Sbjct: 170 SGSQDVHQK 178
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 30.0 bits (66), Expect = 2.8 Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 14/89 (15%) Frame = -3 Query: 418 GPATRGRRSRALQAWPNGSGSPPARGSWRRSR---GQQTTQQCPNRS---RQGTHR---- 269 GP+TRGR+ GS A+ S R S GQ T + P S RQG H Sbjct: 2756 GPSTRGRQ---------GSRHEQAQDSSRHSASQDGQDTIRGHPGSSRGGRQGYHHEHSV 2806 Query: 268 --SGSSGAHQK--AGRGRAHGQSRTTGCR 194 SG SG+H +GR+ +G R Sbjct: 2807 DSSGHSGSHHSHTTSQGRSDASRGQSGSR 2835
>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 29.6 bits (65), Expect = 3.7 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = +1 Query: 187 VASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 366 V++ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 367 R 369 R Sbjct: 180 R 180
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 29.6 bits (65), Expect = 3.7 Identities = 34/123 (27%), Positives = 46/123 (37%), Gaps = 16/123 (13%) Frame = -3 Query: 415 PATRGRRSRALQAWPN----GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAH 248 PA S A+ P+ G G+PP +W P+ + QG H +G +G H Sbjct: 307 PAPEAFGSPAVHLAPDLAFQGDGAPPLDATWPFGAS-------PSHAAQG-HSAGRAGGH 358 Query: 247 QKAGRGR---------AHGQSRTTGCRRQPAWPLP---PFCAW*REPHQKQTMMASSSLP 104 GR G S T R + AW +P P C P ++ A S P Sbjct: 359 LHPTAGRPGFEGNEFAPAGASSLTAPRGREAWLVPVPSPACVSNTHPSRRSQDPALSP-P 417 Query: 103 CRQ 95 RQ Sbjct: 418 IRQ 420
>TR240_HUMAN (Q9UHV7) Thyroid hormone receptor-associated protein complex 240 kDa| component (Trap240) (Thyroid hormone receptor-associated protein 1) (Vitamin D3 receptor-interacting protein complex component DRIP250) (DRIP 250) (Activator-recruited cofac Length = 2174 Score = 29.6 bits (65), Expect = 3.7 Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 5/110 (4%) Frame = +1 Query: 22 SWSTQTGPPSIRMASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMR-KTAAKAKQVASG 198 S S T ++ AST+ S SS +G + LPS FG + +A V SG Sbjct: 1523 STSVATANSTLTTASTSSSSSSNLNSGVSSNKLPSFPPFGSMNSNAAGSMSTQANTVQSG 1582 Query: 199 SPWYGSDRVLYLGPLSGEPPSYLTGEFP----GDYGWDTAGLSADPETFA 336 L +SGE S T P D G+ D ++ A Sbjct: 1583 QLGGQQTSALQTAGISGESSSLPTQPHPDVSESTMDRDKVGIPTDGDSHA 1632
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 29.6 bits (65), Expect = 3.7 Identities = 40/121 (33%), Positives = 55/121 (45%), Gaps = 2/121 (1%) Frame = +1 Query: 58 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLG 237 +AS + ++ QA AGK V S +V G T+ +A++++VA YL Sbjct: 12 VASRSSTVRVQA-AGKTVSG--SKTVSGGK--TVGSASAESRRVAEVQA--------YLA 58 Query: 238 PLSGEPPSYLTGEFPGDYGWDTAGLSADPET--FAKNRELEVIHCRWAMLGALGCVFPEL 411 L G +G F G WD L+A + RE E+ H R AML ALG V E Sbjct: 59 TLPG--CGVESGPFKGV--WDPLSLAATATVGDVRRWRESEITHGRVAMLAALGFVVGEQ 114 Query: 412 L 414 L Sbjct: 115 L 115
>EPHB3_XENLA (Q91735) Ephrin type-B receptor 3 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor TCK) Length = 974 Score = 29.6 bits (65), Expect = 3.7 Identities = 17/57 (29%), Positives = 28/57 (49%) Frame = -3 Query: 346 RGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWP 176 RG+++ +G+ + CP SR S ++ + G RA G+S T C P+ P Sbjct: 268 RGTYKSKQGEGSCMPCPANSR--AISSAATICSCQNGYYRADGESAETACTSVPSAP 322
>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)| Length = 633 Score = 29.6 bits (65), Expect = 3.7 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 11/83 (13%) Frame = -3 Query: 403 GRRSRALQAWPNGSGSPPARGSWRRS---------RGQQTTQQCPNRSRQGTHRSGSSG- 254 GR R P G G+PP RG S RG + + P + ++G GS G Sbjct: 505 GRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQQQRGRGSRGSRGN 564 Query: 253 -AHQKAGRGRAHGQSRTTGCRRQ 188 G+ +A G ++ RRQ Sbjct: 565 RGGNVGGKRKADGYNQPDSKRRQ 587
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 29.6 bits (65), Expect = 3.7 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 1/80 (1%) Frame = +2 Query: 38 QDLHRSEWPQPPCRSLPKPL-PARQ*RTCHHRLFLVRLASPCAKRRQRPSRLPPAARGTA 214 QDL +PP R P+ P+ HH F L +P + RPS P RGT Sbjct: 143 QDLRNRPGRRPPARPAPRSTPPSPPTHRVHH--FYPSLPTPLLRPSGRPS---PRDRGT- 196 Query: 215 LTVCSTSARFLVSPRAT*PV 274 RF+++PR P+ Sbjct: 197 -----LPDRFVITPRRRYPI 211
>ADF1_CANAL (P46589) Adherence factor (Adhesion and aggregation mediating| surface antigen) Length = 612 Score = 29.3 bits (64), Expect = 4.8 Identities = 26/88 (29%), Positives = 37/88 (42%) Frame = -3 Query: 445 TASPNFTPFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRS 266 TA PN + + +T+ + A P P + Q TQ NRSR T S Sbjct: 165 TAQPNISYYNYSTQPQLQ---SAQPISHSQPQPQ--------PQATQPRSNRSRSQTSFS 213 Query: 265 GSSGAHQKAGRGRAHGQSRTTGCRRQPA 182 G+ Q +G G R+TG ++Q A Sbjct: 214 KPRGSRQVSGSG------RSTGAKKQSA 235
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 29.3 bits (64), Expect = 4.8 Identities = 21/49 (42%), Positives = 26/49 (53%) Frame = -2 Query: 287 SPGNSPVR*LGGSPESGPR*STRSEPYHGLPEATCLAFAAVLRMVTRAS 141 SPG P G+P S PR + R+ PY GLP A A R ++RAS Sbjct: 771 SPGPPPPASPPGAPAS-PR-APRTSPYGGLPAAPLAGPALPARRLSRAS 817
>GUN1_RALSO (P58599) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) Length = 424 Score = 29.3 bits (64), Expect = 4.8 Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = +1 Query: 172 AKAKQVASGSP---WYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 342 AK QVA G+ W G V G GE G PG YG + SAD T+ KN Sbjct: 103 AKVCQVAQGTGTLLWRG---VSLAGAEFGE------GSLPGTYGSNYIYPSADSATYYKN 153 Query: 343 RELEVIHC--RWAML 381 + + ++ RW L Sbjct: 154 KGMNLVRLPFRWERL 168
>GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 29.3 bits (64), Expect = 4.8 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +1 Query: 145 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 321 A +R T + + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 109 ADTNLRHTCRRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGAD 168 Query: 322 PETFAKNRELEVIHCR 369 A R++ H R Sbjct: 169 K---AYGRDIVEAHYR 181
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 29.3 bits (64), Expect = 4.8 Identities = 29/102 (28%), Positives = 33/102 (32%), Gaps = 24/102 (23%) Frame = -3 Query: 418 GPATRGRRSRALQAWPNGSGSPPARGS--------WRRS---------------RGQQTT 308 G A GRR R GSG PP R WRR RG + Sbjct: 1589 GAAAAGRRDRPGGGGGWGSGPPPCRRCGHRCWLCWWRRGPRPRRRPGLTDRVPPRGGPSP 1648 Query: 307 QQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR-RQP 185 + C R G G G + G G R CR R+P Sbjct: 1649 RGCRGAGRAGGGGRGGCGGGRAPGAAGGPGLCRCECCRGRRP 1690
>GPC4_MOUSE (P51655) Glypican-4 precursor (K-glypican)| Length = 557 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = -2 Query: 227 STRSEPYHGLPEATCLAFAAVLRMVTRASPKTDDDGKFFTALPAKAWEESDM 72 S R PYH T A ++ R+VT K KF+++LP+ + M Sbjct: 362 SARFRPYHPEQRPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPSTVCNDERM 413
>CACB2_BOVIN (Q9MZL5) Voltage-dependent L-type calcium channel beta-2 subunit| (CAB2) (Calcium channel, voltage-dependent, beta 2 subunit) Length = 603 Score = 29.3 bits (64), Expect = 4.8 Identities = 14/53 (26%), Positives = 23/53 (43%) Frame = -3 Query: 346 RGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQ 188 RG+ RS Q + CP ++ HRS + + ++G R + T Q Sbjct: 451 RGAPGRSASQAEEEHCPEPVKKAQHRSSTQHHNHRSGTSRGLSRQETLDSETQ 503
>PRIO_SAISC (P40258) Major prion protein precursor (PrP) (PrP27-30) (PrP33-35C)| (CD230 antigen) Length = 260 Score = 29.3 bits (64), Expect = 4.8 Identities = 25/85 (29%), Positives = 29/85 (34%) Frame = -3 Query: 424 PFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ 245 P G T G R Q P G+ PP G W + G Q P+ G G G Sbjct: 28 PGGWNTGGSRYPG-QGSPGGNRYPPQGGGWGQPHGGGWGQ--PHGGGWGQPHGGGWGQPH 84 Query: 244 KAGRGRAHGQSRTTGCRRQPAWPLP 170 G G+ HG G W P Sbjct: 85 GGGWGQPHGGGWGQGGGTHNQWNKP 109
>GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +1 Query: 148 RVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 294 R R AK ++A PW+G ++ L G P + G FPG G Sbjct: 105 RTNHRHHTAKVMELAKDEIPWFGIEQEYTLFDADGSPYGWPKGGFPGPQG 154
>EFG1_CANAL (P43064) Enhanced filamentous growth protein| Length = 552 Score = 29.3 bits (64), Expect = 4.8 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%) Frame = -3 Query: 328 SRGQQTTQQCPNR--SRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQP------AWPL 173 S+G Q PN+ Q H +GS+ + A G + T+G +QP A P+ Sbjct: 109 SQGNYYQQTIPNQLSQPQPQHYNGSNRNYTSAPSGAPIPSNSTSGPSQQPPLPGQQAVPI 168 Query: 172 PPFCAW*REPHQKQTMMASSS 110 PP + ++P Q + +SS Sbjct: 169 PPHVSTMQQPTPVQDTLNASS 189
>RS6_WOLSU (Q7MQZ8) 30S ribosomal protein S6| Length = 137 Score = 28.9 bits (63), Expect = 6.3 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -2 Query: 110 TALPAKAWEESDMVVEAILIDGGPVCVLQELGM 12 T P + E+ + EAI+ +GG +C Q++GM Sbjct: 13 TLTPEEIVEKINFYKEAIIKNGGEICATQDMGM 45
>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 28.9 bits (63), Expect = 6.3 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 361 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 194 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 103 GPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 162 Query: 193 R 191 R Sbjct: 163 R 163
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 28.9 bits (63), Expect = 6.3 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 361 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 194 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 103 GPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 162 Query: 193 R 191 R Sbjct: 163 R 163
>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) (Putative myelin regulatory factor 1) (MRF-1) Length = 220 Score = 28.9 bits (63), Expect = 6.3 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 361 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 194 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 103 GPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 162 Query: 193 R 191 R Sbjct: 163 R 163
>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 220 Score = 28.9 bits (63), Expect = 6.3 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 361 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 194 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 103 GPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 162 Query: 193 R 191 R Sbjct: 163 R 163
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 28.9 bits (63), Expect = 6.3 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 361 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 194 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 104 GPPPRRYGSSGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 163 Query: 193 R 191 R Sbjct: 164 R 164
>HIS1_XANAC (Q8PLH0) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)| (ATP-PRT) Length = 304 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = -1 Query: 411 QLGEDAAERSKHGPTAVDHLQLAVLGEGLGVSRQPSSVP 295 +L E AAER +HG A H AV G G G R +VP Sbjct: 82 ELEEQAAERRRHGLPAAYH---AVRGVGFGQCRLMLAVP 117
>RDRP_NODAV (Q9IMM4) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA| replicase) (Protein A) Length = 1043 Score = 28.9 bits (63), Expect = 6.3 Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 8/107 (7%) Frame = -3 Query: 406 RGRRSRALQAWPNGSGS----PPA--RGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ 245 R + + QA GSG P A RGS +R +G + + P+R+ S AHQ Sbjct: 916 RANQVTSSQAGAAGSGDASNDPNAHDRGS-QRQQGSASVLRVPDRAAPAGVSSDEQPAHQ 974 Query: 244 KAGRGRAH--GQSRTTGCRRQPAWPLPPFCAW*REPHQKQTMMASSS 110 A R A G G RR+P P R+ +Q + + S Sbjct: 975 TASRSSASRGGAGPGRGGRRRPGPPAKTTAGGARDGNQARAPTSGPS 1021
>GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precursor (EC 6.3.1.2)| (Glutamate--ammonia ligase) Length = 403 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = +1 Query: 187 VASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 366 +A+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 153 IANEYPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHY 209 Query: 367 R 369 R Sbjct: 210 R 210
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = +3 Query: 420 NGVKFGEAVWF 452 NGVKFGEAVWF Sbjct: 6 NGVKFGEAVWF 16
>RK22_CHLRE (Q84U21) 50S ribosomal protein L22, chloroplast precursor| Length = 175 Score = 28.9 bits (63), Expect = 6.3 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +2 Query: 143 RLASPCAKRRQRPSRLPPAARGTALTVCSTSARFLVSPRA 262 R P RP+R+ P AR TA VCS + +P A Sbjct: 17 RSVQPFRPAAVRPARIAPVARKTATVVCSAATDAPAAPVA 56
>GLN11_ORYSA (P14656) Glutamine synthetase cytosolic isozyme 1-1 (EC 6.3.1.2)| (OsGLN1;1) (OsGS1;1) (Glutamate--ammonia ligase GLN1;1) (Glutamine synthetase shoot isozyme) Length = 356 Score = 28.9 bits (63), Expect = 6.3 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = +1 Query: 160 RKTAAK---AKQVASGSPWYGSDR-VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 321 R AAK + +VAS PWYG ++ L P + G FPG G G+ AD Sbjct: 107 RHNAAKIFSSPEVASEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGIGAD 164
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 28.9 bits (63), Expect = 6.3 Identities = 19/70 (27%), Positives = 27/70 (38%) Frame = -3 Query: 403 GRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRA 224 G R A A P G PP ++G + + + G GAH AG Sbjct: 703 GERGEAGPAGPTGFAGPPGAAGHTGAKGDRGAKGPKGEAGS----PGPLGAHGSAGPAGP 758 Query: 223 HGQSRTTGCR 194 +G + +TG R Sbjct: 759 NGPAGSTGAR 768
>CSKI2_HUMAN (Q8WXE0) Caskin-2| Length = 1202 Score = 28.9 bits (63), Expect = 6.3 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -3 Query: 451 NQTASPNFTPFGPATRGRRSRALQAWPNGSGSPPARGS 338 ++ A P+ P PA G S + P G+PP+RGS Sbjct: 908 SEPAGPSEPPGPPAPAGPASDTEEEEPGPEGTPPSRGS 945
>HNF3G_MOUSE (P35584) Hepatocyte nuclear factor 3-gamma (HNF-3G) (Forkhead box| protein A3) Length = 353 Score = 28.5 bits (62), Expect = 8.2 Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 2/96 (2%) Frame = -3 Query: 445 TASPNFTPFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRS 266 T +P +P+ P G ++ L P G +PPA T P GT S Sbjct: 42 TLNPLSSPYPPG--GLQASPL---PTGPLAPPA----------PTAPLGPTFPSLGTGGS 86 Query: 265 --GSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLPPF 164 GS+ + G G HG+ G RR A PP+ Sbjct: 87 TGGSASGYVAPGPGLVHGKEMAKGYRRPLAHAKPPY 122
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 28.5 bits (62), Expect = 8.2 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = -3 Query: 334 RRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ--KAGRGRAHGQSRTTGCR 194 R+ R Q + NRSR +R GS+G + GRGR G SR G R Sbjct: 75 RQIRVDQAGKSSDNRSRG--YRGGSAGGRGFFRGGRGRGRGFSRGGGDR 121
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 28.5 bits (62), Expect = 8.2 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = -3 Query: 334 RRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ--KAGRGRAHGQSRTTGCR 194 R+ R Q + NRSR +R GS+G + GRGR G SR G R Sbjct: 75 RQIRVDQAGKSSDNRSRG--YRGGSAGGRGFFRGGRGRGRGFSRGGGDR 121
>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)| Length = 1992 Score = 28.5 bits (62), Expect = 8.2 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = -3 Query: 364 SGSPPAR-GSWRRSRGQQTTQQCPNRSRQGT 275 S SPPA S RRS Q+TT C + SR+G+ Sbjct: 310 SESPPAELPSLRRSTRQKTTGSCASTSRRGS 340
>SPT5H_DROME (Q9V460) Transcription elongation factor SPT5 (dSpt5) (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) Length = 1078 Score = 28.5 bits (62), Expect = 8.2 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = -3 Query: 328 SRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRA 224 SRG ++ + +RS+ G RSGS ++ RG++ Sbjct: 39 SRGSRSVSRSRSRSQSGHSRSGSESPQRRDNRGKS 73
>CCAR1_MOUSE (Q8CH18) Cell division cycle and apoptosis regulator protein 1| (Cell cycle and apoptosis regulatory protein 1) (CARP-1) Length = 1146 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Frame = -3 Query: 355 PPARGSWRRSRGQQTTQQCPNRSRQ---GTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 191 PP+R S R RG Q + +RSR+ RS +K R R+ + R RR Sbjct: 294 PPSRFSGRNDRGDQVPNRKDDRSRERDRERRRSRERSPQRKRSRERSPRRERERSPRR 351
>TKT1_RHIME (P58333) Transketolase (EC 2.2.1.1) (TK)| Length = 694 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = -3 Query: 292 RSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLPPF 164 R+R G + G+H+ G A G+ R + WP PPF Sbjct: 251 RTRIGKGAASMEGSHKT--HGAALGEKEIAATREKLGWPHPPF 291
>RHO_MYCTU (P66028) Transcription termination factor rho (EC 3.6.1.-)| (ATP-dependent helicase rho) Length = 602 Score = 28.5 bits (62), Expect = 8.2 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = -3 Query: 400 RRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGR 227 RRS +A P+GSG + + +Q QQ +GT G G Q+A G+ Sbjct: 124 RRSATREAGPSGSGERAGTAA-DDTDNRQGGQQDAKTEERGTDAGGDQGGDQQASGGQ 180
>RHO_MYCBO (P66029) Transcription termination factor rho (EC 3.6.1.-)| (ATP-dependent helicase rho) Length = 602 Score = 28.5 bits (62), Expect = 8.2 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = -3 Query: 400 RRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGR 227 RRS +A P+GSG + + +Q QQ +GT G G Q+A G+ Sbjct: 124 RRSATREAGPSGSGERAGTAA-DDTDNRQGGQQDAKTEERGTDAGGDQGGDQQASGGQ 180
>CCAR1_HUMAN (Q8IX12) Cell division cycle and apoptosis regulator protein 1| (Cell cycle and apoptosis regulatory protein 1) (CARP-1) (Death inducer with SAP domain) Length = 1150 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Frame = -3 Query: 355 PPARGSWRRSRGQQTTQQCPNRSRQ---GTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 191 PP+R S R RG Q + +RSR+ RS +K R R+ + R RR Sbjct: 297 PPSRFSGRNDRGDQVPNRKDDRSRERERERRRSRERSPQRKRSRERSPRRERERSPRR 354
>GLNA1_DROME (P20477) Glutamine synthetase 1, mitochondrial precursor (EC| 6.3.1.2) (Glutamate--ammonia ligase 1) Length = 399 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/69 (24%), Positives = 28/69 (40%) Frame = +1 Query: 187 VASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 366 ++ PW+G ++ L + G P + FP G G+ AD E V+ C Sbjct: 161 ISDQEPWFGIEQEYTLLDVDGRPFGWPENGFPAPQGPYYCGVGADRVYARDLVEAHVVAC 220 Query: 367 RWAMLGALG 393 +A + G Sbjct: 221 LYAGIDFAG 229
>GDF7_CERAE (Q9BDW8) Growth/differentiation factor 7 precursor (GDF-7)| Length = 447 Score = 28.5 bits (62), Expect = 8.2 Identities = 20/61 (32%), Positives = 27/61 (44%) Frame = -3 Query: 367 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQ 188 G+GSP A + RR R + GT + SG G GR HG+ + C R+ Sbjct: 303 GTGSPRAVTAGRRRR---------RTALAGTRTAQGSGG----GAGRGHGRRGRSRCSRK 349 Query: 187 P 185 P Sbjct: 350 P 350
>KNL1C_BOMMX (Q90W88) Kininogen-1c precursor (BMK-1) [Contains: Maximakinin| (Bombinakinin M); Bradykinin] Length = 152 Score = 28.5 bits (62), Expect = 8.2 Identities = 24/90 (26%), Positives = 32/90 (35%) Frame = -3 Query: 436 PNFTPFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSS 257 P F+PF + R L PP +R QT + P +R+G G S Sbjct: 53 PGFSPFRGKFHSQTLRDLPKINRKGPRPPGFSPFRGKFHSQTLRDLPKINRKGPRPPGFS 112 Query: 256 GAHQKAGRGRAHGQSRTTGCRRQPAWPLPP 167 RG+ H QS + P PP Sbjct: 113 -----PFRGKFHSQSLRDLPKINRKGPRPP 137
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 28.5 bits (62), Expect = 8.2 Identities = 20/82 (24%), Positives = 33/82 (40%) Frame = -3 Query: 448 QTASPNFTPFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHR 269 Q +P+ T + + S Q P+ G ++S GQQ + P Q Sbjct: 102 QQPAPSSTSGSYGSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQGYGQQNQY 161 Query: 268 SGSSGAHQKAGRGRAHGQSRTT 203 + SSG G G +GQ +++ Sbjct: 162 NSSSGGGGGGGGGGNYGQDQSS 183 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/68 (25%), Positives = 32/68 (47%) Frame = -3 Query: 382 QAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTT 203 Q+ P G GS GS + S+ Q Q S +SG++ + + ++GQ ++ Sbjct: 69 QSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSG 128 Query: 202 GCRRQPAW 179 +QP++ Sbjct: 129 SYSQQPSY 136
>CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22| Length = 881 Score = 28.5 bits (62), Expect = 8.2 Identities = 28/108 (25%), Positives = 42/108 (38%) Frame = -3 Query: 400 RRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAH 221 RR R+ + S +PP R R+RG++ + Q + R+ RS S R R Sbjct: 766 RRDRSYSRSLSRSVTPPLRAVDARARGRRYSSQSLSPPRRRAERSVSPQRPPPGRRPRGD 825 Query: 220 GQSRTTGCRRQPAWPLPPFCAW*REPHQKQTMMASSSLPCRQRLGKRA 77 SR+ P P + R + AS S P R +R+ Sbjct: 826 SLSRSPS-------PPPRYAREQRRRRNSSSASASRSPPHRDSNRRRS 866
>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1| Length = 959 Score = 28.5 bits (62), Expect = 8.2 Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Frame = -3 Query: 265 GSSGAHQKAGRGRAHGQSRTTGCR-----RQPAWPLPP 167 G GA Q G G A G SR G RQPAW PP Sbjct: 142 GLGGAEQAMGSGHA-GASRRHGIEAGSAWRQPAWQPPP 178 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,722,677 Number of Sequences: 219361 Number of extensions: 1738124 Number of successful extensions: 7083 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 6349 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7006 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
