>AIR12_ARATH (Q94BT2) Auxin-induced in root cultures protein 12 precursor|
          Length = 252

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +2

Query: 134 YAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPSG-WVAWGVNQDAPAMAGARVIAA 310
           +  C  LP   + L +TY++ N++L  AF  +    +G WVAW +N     MAG++   A
Sbjct: 40  FDSCEDLPVLNSYLHYTYNSSNSSLSVAFVATPSQANGGWVAWAINPTGTKMAGSQAFLA 99

Query: 311 F 313
           +
Sbjct: 100 Y 100

>IE63_HHV2H (P28276) Transcriptional regulator IE63 (VMW63) (ICP27)|
          Length = 512

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -3

Query: 349 REREQRARGRVGEGGDHARPSHGRRVLVDA----PRHPSRRRDEGP 224
           R   +R RGR G GG  + P   RRV  +A     RHP+  R +GP
Sbjct: 141 RRGRRRGRGRYGPGGADSTPKPRRRVSRNAHNQGGRHPASARTDGP 186

>KHSE_PYRKO (Q5JH53) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)|
          Length = 292

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 146 IALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNQDAPAMAGARVIAAF 313
           IALP +   + W      A LDA   G+F+S SG   + + +D  A+ G  +  AF
Sbjct: 217 IALPYRLRLMPWFARVWKAALDAGAYGAFVSGSGPAIFALGEDLHAI-GKAIAEAF 271

>Y202_MYCPN (Q50286) Very hypothetical adhesin P1-like protein MPN202|
           (GT9_orf313)
          Length = 313

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -1

Query: 324 DGSEKAAITRAPAMAGASWLTPHATHPDGE---MKDPVKAASSVALRASYVH 178
           D +++A I   PA++G SW       P GE    +  V  +SSV L   Y H
Sbjct: 225 DATQRALIWAPPALSGLSWQLGQPVGPRGECVGFEGGVGGSSSVRLARIYHH 276

>P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 367

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -3

Query: 355 HEREREQRARGRVGEGGDHARPSHGRRVLVDAPR 254
           +E  +E     ++ EGG   RPS GRRV V+ P+
Sbjct: 321 YEMLKEINEALQLAEGGSAPRPSKGRRVKVEGPQ 354

>ENO_SYNPX (Q7U3T1) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)|
           (2-phospho-D-glycerate hydro-lyase)
          Length = 430

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = -1

Query: 351 NGSANSAPVDGSEKAAIT---RAPAMAGASWLTPHATHPDGEMKDPVKAASSVALRASYV 181
           N +ANS  +  ++  ++T   +A  +AG S  T   +H  GE +D   A  SVA RA  +
Sbjct: 329 NSTANSILIKVNQIGSLTETLQAIDLAGRSGYTSVISHRSGETEDTTIADLSVATRAGQI 388

>NANH_MICVI (Q02834) Sialidase precursor (EC 3.2.1.18) (Neuraminidase)|
          Length = 647

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 9/70 (12%)
 Frame = +2

Query: 158 TQGATLAWTYDARNATLDAAFTGSFI---SPSGWVAWGVNQDAPAMAGARVIAAFSDPS- 325
           T    L  +YD R   +DA    S +   S  G   WG  Q   A      I  FSDPS 
Sbjct: 75  TPDGDLLASYDGRPTGIDAPGPNSILQRRSTDGGRTWGEQQVVSAGQTTAPIKGFSDPSY 134

Query: 326 -----TGALF 340
                TG +F
Sbjct: 135 LVDRETGTIF 144

>CYP1_BRUMA (Q27450) Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (PPIase|
           1) (Cyclophilin) (BmCYP-1)
          Length = 843

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = -3

Query: 358 EHEREREQRARGRVGEGGDHARPSHGRRVLVDAPRHPSRRRDEG 227
           EH+R    R+R R        R S  RR      RH SR R  G
Sbjct: 694 EHKRNERSRSRRRRSRSNGRRRRSSSRRSRSRDRRHKSRSRSRG 737

>NDK_DESVH (Q729L7) Nucleoside diphosphate kinase (EC 2.7.4.6) (NDK) (NDP|
           kinase) (Nucleoside-2-P kinase)
          Length = 139

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -1

Query: 255 ATHPDGEMKDPVKAASSVALRASYVHASVAPCVGSAMHLAYAFTGVDVV 109
           AT+P    +  ++   +V+L A+ VH S AP   +A  ++Y F  +++V
Sbjct: 91  ATNPANAAEGTIRKKYAVSLEANSVHGSDAP-ETAAFEISYFFNALEIV 138

>PUR2_RHILO (Q986A5) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS)|
           (Glycinamide ribonucleotide synthetase)
           (Phosphoribosylglycinamide synthetase)
          Length = 425

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +2

Query: 113 TSTPVKAYAKCIALPTQGATLAWTYDARNATLDAAFTGSF 232
           T  P+   A  +A   +G T+A T D   A LDA F GSF
Sbjct: 136 TGAPIVIKADGLAAG-KGVTVAMTSDEARAALDACFEGSF 174

>RNH_ZYMMO (O69014) Ribonuclease H (EC 3.1.26.4) (RNase H)|
          Length = 156

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -1

Query: 306 AITRAPAMAGASWLTPHATHPDGEMKDPVKAASSVAL 196
           A+TR   +A   W+  HA HPD E  D + + +++AL
Sbjct: 115 ALTRQHDIAW-KWVKGHAGHPDNERADQLASDAAIAL 150

>RNPA_THEFI (Q7X5L2) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP|
           protein) (RNase P protein) (Protein C5)
          Length = 240

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -3

Query: 346 EREQRARGRVGEGGDHARPSHGRRVLVDAPRHPSRRRDEGP 224
           E ++RA G   +  + A P H  RV+   P HP  R+D GP
Sbjct: 24  EDQERAEGAEAQAAEGAPPPH--RVI---PPHPGLRQDGGP 59

>L100_ADE40 (P11823) Late 100 kDa protein|
          Length = 770

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +1

Query: 238 AVGMGG-VGRQPGRAG--HGWGARDRRLLRPVHG 330
           AVG GG VGRQPGR     G G  D  L +P  G
Sbjct: 693 AVGRGGDVGRQPGRGSFRRGGGGADGELGQPRRG 726

>ACPS_STRCO (O86785) Holo-[acyl-carrier-protein] synthase (EC 2.7.8.7)|
           (Holo-ACP synthase) (4'-phosphopantetheinyl transferase
           acpS)
          Length = 123

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -1

Query: 309 AAITRAPAMAGASWLTPHATHPDGEMKDPVKAASSVALRASYVHASVAP 163
           AA+ R PA+AG  +L      P GE +     A+  A + +   A  AP
Sbjct: 18  AALERTPALAGRLFLESELLLPGGERRGVASLAARFAAKEALAKALGAP 66

>AMPA_CORDI (Q6NG90) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 500

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 205 AGRGLHGVLHLAVGMGGVGRQPGRAGHGWGA 297
           A R L GV H+A  +G  G QP   G   GA
Sbjct: 109 AARSLAGVQHVATTLGAFGLQPAVEGFALGA 139

>OSA_DROSI (Q9N6K2) Trithorax group protein osa (Protein eyelid) (Fragment)|
          Length = 324

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = -1

Query: 357 STNGSANSAPVDGSEKAAITRAPAMAGASWLTPHATHPDGEMKDPVKAASSVALRASYVH 178
           ST  S++S+    S+ A    AP+ A     +  A     + +   KAA++ A  A+  +
Sbjct: 218 STTNSSHSSSAISSQSAITVAAPSAAATGAPSATAAAIASDQQQVSKAAAAAAAAAALSN 277

Query: 177 ASVAPCVGSA 148
           AS A    +A
Sbjct: 278 ASAAAAAAAA 287

>RSP6_CAEEL (Q18409) Probable splicing factor, arginine/serine-rich 6|
           (RNA-binding protein srp-1) (CeSRp20)
          Length = 179

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +1

Query: 214 GLHGVLHLAVGM--GGVGRQPGRAGHGWGARDRRLLRPVHGRA 336
           G+   + L+ G   GG GR  G  G G G RDR   R   GR+
Sbjct: 66  GVRARVELSTGQRRGGGGRGGGFGGRGGGGRDRSPYRGDRGRS 108

>SEC14_YARLI (P45816) SEC14 cytosolic factor|
           (Phosphatidylinositol/phosphatidylcholine transfer
           protein) (PI/PC TP)
          Length = 492

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
 Frame = -1

Query: 351 NGSANSAPVDGSEKAAITRAPAMAGAS---WLTPHATHPDGEMKDPVKAASSVALRASYV 181
           NG+  +A   G+  AA   A A AGAS      P    P    K PV AA+  A   +  
Sbjct: 334 NGNGAAAAAAGAGTAAAGGAAAAAGASSSKQAAPAQAAPAQAAKAPVPAAAKTATAPAPT 393

Query: 180 HASVAPCVGS 151
             + AP   S
Sbjct: 394 GKTAAPQTNS 403

>NGN2_HUMAN (Q9H2A3) Neurogenin 2|
          Length = 272

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -3

Query: 346 EREQRARGRVGEGGDHARPSHGRRVLVDAPRHPSRRR 236
           E  Q ARG V  G +  RP+    ++ D  R PSR R
Sbjct: 58  EAGQGARGGVAAGAEGCRPARLLGLVHDCKRRPSRAR 94

>DNAJ_ERWCT (Q6D0B8) Chaperone protein dnaJ|
          Length = 379

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 316 GEGGDHARPSHGRRVLVDAPRHPSRRRDE 230
           GE GDH  PS    V V    HP  +R+E
Sbjct: 235 GEAGDHGAPSGDLYVQVQVKAHPIFQREE 263

>FRZE_MYXXA (P18769) Gliding motility regulatory protein (EC 2.7.13.3)|
          Length = 777

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 291 PAMAGASWLTPHATHPDGEMKDPVKAASSVALRASYVHASVAP 163
           PA+AGA  + P    P   +  PV   ++VA   + V A VAP
Sbjct: 131 PAIAGARPVAPPPAPPPAPVAAPVVTPAAVAAPPAPVQAPVAP 173

>KITH_BHV5 (P36226) Thymidine kinase (EC 2.7.1.21)|
          Length = 350

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 22/67 (32%), Positives = 28/67 (41%)
 Frame = +2

Query: 149 ALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNQDAPAMAGARVIAAFSDPST 328
           A P   A   +    RNA    A T +F+   G  AW    DA   A A  +AA +DP  
Sbjct: 183 ARPGDRADAGFWPPLRNAYALLANTCAFLGAGG--AWRDGWDALGWADADALAALADPRG 240

Query: 329 GALFALP 349
           G    +P
Sbjct: 241 GGREPVP 247

>BGAL_HUMAN (P16278) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid|
           beta-galactosidase)
          Length = 677

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 176 AWTYDARNATLDAAFTGSFISPSG 247
           AW +++ N TL A + G+F  PSG
Sbjct: 538 AWAHNSSNYTLPAFYMGNFSIPSG 561

>BGAL_MACFA (Q60HF6) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid|
           beta-galactosidase)
          Length = 682

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 176 AWTYDARNATLDAAFTGSFISPSG 247
           AW + + N TL A + G+F  PSG
Sbjct: 538 AWAHSSSNYTLPAFYVGNFSIPSG 561

>GLUQ_SYNPX (Q7U8M8) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)|
          Length = 293

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +1

Query: 247 MGGVGRQPGRA---GHGWGARDRRL 312
           + G+ R PG     G GWG RDRRL
Sbjct: 125 LAGLARYPGTCRDGGAGWGWRDRRL 149

>ANP_NOTCO (P24856) Ice-structuring glycoprotein precursor (ISGP) (Antifreeze|
           glycopeptide polyprotein) (AFGP polyprotein) [Contains:
           AFGP7 (AFGP 7); AFGP8 (AFGP 8); AFGP8-like] (Fragment)
          Length = 790

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
 Frame = +2

Query: 110 TTSTPVKA---YAKCIALPTQGATLAWTYDARNATLDAAFTGSF--ISPSGWVAWGVNQD 274
           T +TP  A   +A   A P   AT A  + A  AT     T +F   + +   A      
Sbjct: 674 TAATPATAALNFAATAATPATAATPALIFAATAATAATPATAAFNFAATAATAATPATAA 733

Query: 275 APAMAGARVIAAFSDPSTGALFALPF 352
            PA+  A   A  + P+T A  AL F
Sbjct: 734 TPALIFAATAATAATPATPATPALIF 759

>BGAM_HUMAN (P16279) Beta-galactosidase-related protein precursor|
           (Beta-galactosidase-like protein) (S-Gal)
           (Elastin-binding protein) (EBP)
          Length = 546

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 176 AWTYDARNATLDAAFTGSFISPSG 247
           AW +++ N TL A + G+F  PSG
Sbjct: 407 AWAHNSSNYTLPAFYMGNFSIPSG 430

>NDK_BRUME (Q8YGA4) Nucleoside diphosphate kinase (EC 2.7.4.6) (NDK) (NDP|
           kinase) (Nucleoside-2-P kinase)
          Length = 140

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/49 (30%), Positives = 29/49 (59%)
 Frame = -1

Query: 255 ATHPDGEMKDPVKAASSVALRASYVHASVAPCVGSAMHLAYAFTGVDVV 109
           AT+P    +  ++ A ++++  + VH S AP   +A  +AY F+G ++V
Sbjct: 92  ATNPANADEGTIRKAFALSIGENSVHGSDAP-ETAAEEIAYWFSGTEIV 139

>PSAA_PROMP (Q9RC08) Photosystem I P700 chlorophyll a apoprotein A1 (PsaA)|
          Length = 767

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 13/72 (18%)
 Frame = +2

Query: 134 YAKCIALPTQ---GATLAWTY---DARNATLDAAFTGSFISPSG----WVAWGVNQDAPA 283
           Y+  +A PT    GA   W     +  N  L A + G  IS SG    W AWG+  ++  
Sbjct: 104 YSGWLADPTHVKPGAQQVWAIVGQEMLNGDLGANYNGIQIS-SGVFHMWRAWGITNESEL 162

Query: 284 MA---GARVIAA 310
           MA   GA V+AA
Sbjct: 163 MALAIGAVVMAA 174

>PSAA_PROMM (Q7V510) Photosystem I P700 chlorophyll a apoprotein A1 (PsaA)|
          Length = 776

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 13/72 (18%)
 Frame = +2

Query: 134 YAKCIALPTQ---GATLAWTY---DARNATLDAAFTGSFISPSG----WVAWGVNQDAPA 283
           Y+  +A PT     A + W     +  NA + A F G  I+ SG    W AWG+  +   
Sbjct: 104 YSGWLADPTHVKASAQVVWPIVGQEIMNADMGAGFNGIQIT-SGIFQMWRAWGITSETEL 162

Query: 284 MA---GARVIAA 310
           MA   GA ++AA
Sbjct: 163 MALATGALIMAA 174

>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)|
          Length = 1904

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -3

Query: 352 EREREQRARGRVGEGGDHARPSHGRRVLV----DAPRHPSRRRDEG 227
           +R   +  +GR  +  D A P +GRR+ V      PR P++R+  G
Sbjct: 447 KRGARKSTKGRASDIRDAATPKNGRRLSVKKESPTPRLPAKRQANG 492


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,215,804
Number of Sequences: 219361
Number of extensions: 541323
Number of successful extensions: 2486
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2481
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)