>emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR)
          Length = 1490

 Score =  563 bits (284), Expect = e-157
 Identities = 290/292 (99%)
 Strand = Plus / Plus

                                                                       
Query: 23  gcagcacagtgcactcgagttcgagctcgttgaactcctgcagtgcagtgctagctagcg 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11  gcagcacagtgcactcgagttcgagctcgttgaactcctgcagtgcagtgctagctagcg 70

                                                                       
Query: 83  acagtccaagctcaccgtcatccatggctctccagcttctcccctccaccctctccgtcc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  acagtccaagctcaccgtcatccatggctctccagcttctcccctccaccctctccgtcc 130

                                                                       
Query: 143 ccaagaagggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ccaagaagggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcg 190

                                                                       
Query: 203 tgagcagcaaggcgaagaaagcgtcgctggcggtgaggacgcaggtggccacggcgcctt 262
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tgagcagcaaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgcctt 250

                                                               
Query: 263 cgccggtgacgacaagcccgggctcgaccgcgtcgtcgccgagcggcaagaa 314
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cgccggtgacgacgagcccgggctcgaccgcgtcgtcgccgagcggcaagaa 302

>emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlorophyilide reductase
          Length = 1484

 Score =  325 bits (164), Expect = 5e-86
 Identities = 209/224 (93%)
 Strand = Plus / Plus

                                                                       
Query: 91  agctcaccgtcatccatggctctccagcttctcccctccaccctctccgtccccaagaag 150
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 58  agctcaccgtcatccatggctctccagctcctcccctccaccctctccgtccccaagaag 117

                                                                       
Query: 151 ggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcgtgagcagc 210
           || |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 118 ggtagcagcatgggcgcggcggcagtgaaggacacggcggcgttcctgggcgtgagcagc 177

                                                                       
Query: 211 aaggcgaagaaagcgtcgctggcggtgaggacgcaggtggccacggcgccttcgccggtg 270
           ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 178 aaggcgaagaaggcgtcgctagcggtgaggacgcaggtggccacggcgccttcgtcggtg 237

                                                       
Query: 271 acgacaagcccgggctcgaccgcgtcgtcgccgagcggcaagaa 314
           ||||| |||||||||||| |  || ||  |||||||||||||||
Sbjct: 238 acgacgagcccgggctcggcgacggcgaagccgagcggcaagaa 281

>gb|AF223646.1| Uncultured bacterium plasmid pAH115 esterase gene, complete cds
          Length = 2142

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 283 ggctcgaccgcgtcgtcgccga 304
           ||||||||||||||||||||||
Sbjct: 140 ggctcgaccgcgtcgtcgccga 119

>gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosome 1, complete sequence
          Length = 164612

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   cttctcccctccaccctctcc 138
             |||||||||||||||||||||
Sbjct: 42019 cttctcccctccaccctctcc 41999

>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
             complete sequence
          Length = 134183

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ctcgaccgcgtcgtcgccga 304
             ||||||||||||||||||||
Sbjct: 50427 ctcgaccgcgtcgtcgccga 50446

>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    caaggcgaagaaagcgtcgc 229
              ||||||||||||||||||||
Sbjct: 172466 caaggcgaagaaagcgtcgc 172485

>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence
          Length = 211910

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    ctctccagcttctcccctcc 129
              ||||||||||||||||||||
Sbjct: 118208 ctctccagcttctcccctcc 118189

>ref|XM_842911.1| Leishmania major strain Friedlin cysteine peptidase, clan CA, family
            C2 (LMJ_0306) partial mRNA
          Length = 18495

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  caaggcgaagaaagcgtcgc 229
            ||||||||||||||||||||
Sbjct: 7581 caaggcgaagaaagcgtcgc 7600

>gb|AC126798.3| Mus musculus BAC clone RP24-229N7 from chromosome 1, complete sequence
          Length = 172452

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    ccccaagaagggcagcagca 160
              ||||||||||||||||||||
Sbjct: 124088 ccccaagaagggcagcagca 124069

>gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, complete sequence
          Length = 223130

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     gcagtgcagtgctagctagc 81
              ||||||||||||||||||||
Sbjct: 181503 gcagtgcagtgctagctagc 181484

>emb|CR666827.2|CNS0FDHT Tetraodon nigroviridis full-length cDNA
          Length = 555

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 174 ggtgaaggacacggcggcgt 193
           ||||||||||||||||||||
Sbjct: 224 ggtgaaggacacggcggcgt 205

>gb|AF498106.1| Aedes aegypti relish R7 isoform mRNA, complete cds; alternatively
            spliced
          Length = 2730

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   agctcgttgaactcctgcag 65
            ||||||||||||||||||||
Sbjct: 1390 agctcgttgaactcctgcag 1409

>gb|AF498105.1| Aedes aegypti relish R6 isoform mRNA, complete cds; alternatively
            spliced
          Length = 3280

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   agctcgttgaactcctgcag 65
            ||||||||||||||||||||
Sbjct: 1941 agctcgttgaactcctgcag 1960

>gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome 12, complete
            sequence
          Length = 201550

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 62   gcagtgcagtgctagctagc 81
            ||||||||||||||||||||
Sbjct: 2135 gcagtgcagtgctagctagc 2154

>gb|AC091729.4| Homo sapiens BAC clone RP13-580H13 from 7, complete sequence
          Length = 104285

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   ccagcttctcccctccaccc 133
             ||||||||||||||||||||
Sbjct: 51908 ccagcttctcccctccaccc 51927

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 285      ctcgaccgcgtcgtcgccga 304
                ||||||||||||||||||||
Sbjct: 16551688 ctcgaccgcgtcgtcgccga 16551707

>gb|AC068547.7| Homo sapiens BAC clone RP11-458J7 from 2, complete sequence
          Length = 185555

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 111   tctccagcttctcccctccaccct 134
             ||||||||||||| ||||||||||
Sbjct: 85347 tctccagcttctctcctccaccct 85370

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 287     cgaccgcgtcgtcgccgagc 306
               ||||||||||||||||||||
Sbjct: 1012168 cgaccgcgtcgtcgccgagc 1012187

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 285     ctcgaccgcgtcgtcgccga 304
               ||||||||||||||||||||
Sbjct: 2286263 ctcgaccgcgtcgtcgccga 2286282



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 285     ctcgaccgcgtcgtcgccga 304
               ||||||||||||||||||||
Sbjct: 1600910 ctcgaccgcgtcgtcgccga 1600929

>gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the complete genome
          Length = 12204

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  cgaccgcgtcgtcgccgagc 306
            ||||||||||||||||||||
Sbjct: 5711 cgaccgcgtcgtcgccgagc 5692

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 284     gctcgaccgcgtcgtcgccgagcg 307
               ||||||||| ||||||||||||||
Sbjct: 1756600 gctcgaccgggtcgtcgccgagcg 1756623


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,639,629
Number of Sequences: 3902068
Number of extensions: 2639629
Number of successful extensions: 54406
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53971
Number of HSP's gapped (non-prelim): 434
length of query: 320
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 298
effective length of database: 17,147,199,772
effective search space: 5109865532056
effective search space used: 5109865532056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)