>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 75.1 bits (183), Expect = 6e-14
 Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
 Frame = +1

Query: 235 FGDSTVDTGNNNVIGTVLKSNFPPYGRDL-QGGATGRFCNGRLPPDFVSEALGLPPLVPA 411
           FGDS  DTGNNN + T LK N+ PYG D   G ATGRF NGR+  D++S+ LG+  +VPA
Sbjct: 129 FGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVKEIVPA 188

Query: 412 YLD 420
           Y+D
Sbjct: 189 YVD 191

>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 72.4 bits (176), Expect = 4e-13
 Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = +1

Query: 235 FGDSTVDTGNNNVIGTVLKSNFPPYGRDLQ-GGATGRFCNGRLPPDFVSEALGLPPLVPA 411
           FGDS  DTGNNN + T +KSN+ PYG D +   ATGRF NG +  D++++ +G+  +VPA
Sbjct: 208 FGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVKEIVPA 267

Query: 412 YLDP 423
           YLDP
Sbjct: 268 YLDP 271

>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 52.0 bits (123), Expect = 6e-07
 Identities = 28/62 (45%), Positives = 36/62 (58%)
 Frame = +1

Query: 235 FGDSTVDTGNNNVIGTVLKSNFPPYGRDLQGGATGRFCNGRLPPDFVSEALGLPPLVPAY 414
           FGDS  DTG    +        PP+G    G   GR+C+GRL  DF++E+LGLP L  A+
Sbjct: 34  FGDSNSDTGG---LSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGLPYL-SAF 89

Query: 415 LD 420
           LD
Sbjct: 90  LD 91

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 25/58 (43%), Positives = 31/58 (53%)
 Frame = +1

Query: 235 FGDSTVDTGNNNVIGTVLKSNFPPYGRDLQGGATGRFCNGRLPPDFVSEALGLPPLVP 408
           FGDS  DTG        L    PPYG      +TGR+ +GRL  DF++E+  LP L P
Sbjct: 38  FGDSNSDTGGKAAAFYPLN---PPYGETFFHRSTGRYSDGRLIIDFIAESFNLPYLSP 92

>KRUH_DROME (P08155) Krueppel homologous protein 1|
          Length = 845

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = -2

Query: 425 AGSRYAGTSGGRPSASETKSGGSRPLQNRPVAPPCRSRPYGGK--LLFSTVPITLLFPVS 252
           A S  AG+S G PS     S       + P +PP   +P   +   +  TV  TL  P S
Sbjct: 480 AASTSAGSSAGSPSLQGVSSNSESSNHSPPSSPPATKKPRQARQPRVSKTVAATLSIPTS 539

Query: 251 TVESPN 234
           +  SP+
Sbjct: 540 SPLSPS 545

>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF|
          Length = 1097

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -2

Query: 398 GGRPSASETKSGGSRPLQNRPVAPPCRSRPYGGK 297
           GG P  S+    G  P   RPVAPP    P+GG+
Sbjct: 99  GGPPQVSQP---GGFPPVGRPVAPPSNQPPFGGR 129

>MPPA1_ARATH (Q9ZU25) Probable mitochondrial-processing peptidase alpha subunit|
           1, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 1)
          Length = 503

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
 Frame = -2

Query: 425 AGSRYAGTSGGRPSASETKSGGSR--------PLQNRPVAPPCRSRPYGGKLLFSTVPIT 270
           + S  A TS   P+     SGGSR        PLQ   + PP   +    KL  +T+P  
Sbjct: 27  SSSAVAETSSSTPAYLSWLSGGSRAALTSLDMPLQGVSLPPPLADKVEPSKLQITTLPNG 86

Query: 269 LLFPVSTVESP 237
           L     T  +P
Sbjct: 87  LKIASETTPNP 97

>GRLF1_HUMAN (Q9NRY4) Glucocorticoid receptor DNA-binding factor 1 (Glucocorticoid|
            receptor repression factor 1) (GRF-1) (Rho GAP p190A)
            (p190-A)
          Length = 1513

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -2

Query: 344  NRPVAPPCRSRPYGGKLLFSTVPITLLFPVSTVESP 237
            NRP+  P  +RP     + STVP     PV++  SP
Sbjct: 1438 NRPITEPPGARPSSPSAVASTVPFLTSTPVTSQPSP 1473

>VL2_CRPVK (P03108) Minor capsid protein L2|
          Length = 492

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -2

Query: 422 GSRYAGTSGGRPSASETKSGGSRPLQNRPVAPPCRSRPYG 303
           G   AG SGGR   +    GG R +   PV PP  +   G
Sbjct: 56  GISSAGGSGGRLGYTPLSGGGGRVIAAAPVRPPITTESVG 95

>RAD50_AERPE (Q9YFZ1) DNA double-strand break repair rad50 ATPase|
          Length = 919

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 426 GRVE-VRRHERRQAERLGDEVGGQPPVAEPARGAALQVAPVRREVAL 289
           GR E + RH R +AERL      +   AE AR  A ++   RR + L
Sbjct: 474 GRAEAIARHYRHEAERLRKAAKEKAAEAEKARAEASRLQDKRRRIEL 520

>IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H (eIF-4H)|
           (Williams-Beuren syndrome chromosome region 1 protein
           homolog)
          Length = 247

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -2

Query: 413 YAGTSGGRPSASETKSGGSRPLQNRPVAPPCRSRPYGGKLLFSTV 279
           Y+   GGR S       GSR  +  P  PP  +  Y G L F+TV
Sbjct: 11  YSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTA--YVGNLPFNTV 53

>IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H (eIF-4H)|
           (Williams-Beuren syndrome chromosome region 1 protein)
          Length = 247

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -2

Query: 413 YAGTSGGRPSASETKSGGSRPLQNRPVAPPCRSRPYGGKLLFSTV 279
           Y+   GGR S       GSR  +  P  PP  +  Y G L F+TV
Sbjct: 11  YSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTA--YVGNLPFNTV 53

>B4GT2_CRIGR (Q80WN9) Beta-1,4-galactosyltransferase 2 (EC 2.4.1.-)|
           (Beta-1,4-GalTase 2) (Beta4Gal-T2) (b4Gal-T2)
           (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 2) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 2) [Includes: L
          Length = 369

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
 Frame = -2

Query: 410 AGTSGGRPSASETKSG-----GSRPLQNRPVAPPCRSRPYG--GKLLFSTVPITLLFPVS 252
           + T+  RP+A+ + SG      +RP    PV PPC   P G  G+++   +  T   P+ 
Sbjct: 60  SSTNCSRPNATASSSGLPEVPSARPGPTAPVIPPCPDVPPGLVGRVV---IEFTSPMPLE 116

Query: 251 TVESPN 234
            V+  N
Sbjct: 117 RVQREN 122

>SYN1_BOVIN (P17599) Synapsin-1 (Synapsin I)|
          Length = 706

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
 Frame = -2

Query: 416 RYAGTSGGRPSASETKSGGSRPL----QNRPVAPPCRSRP 309
           R    S GR S S+T S G+ PL      +P  PP + RP
Sbjct: 422 RQRDASPGRGSHSQTPSPGALPLGRQISQQPAGPPAQQRP 461

>B4GT2_MOUSE (Q9Z2Y2) Beta-1,4-galactosyltransferase 2 (EC 2.4.1.-)|
           (Beta-1,4-GalTase 2) (Beta4Gal-T2) (b4Gal-T2)
           (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 2) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 2) [Includes: L
          Length = 369

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
 Frame = -2

Query: 410 AGTSGGRPSASETKSG-----GSRPLQNRPVAPPCRSRPYG--GKLLFSTVPITLLFPVS 252
           + T+  RP+A+   SG      +RP    PV PPC   P G  G+++   +  T   P+ 
Sbjct: 60  SSTNCSRPNATAASSGLPEVPSARPGPTAPVIPPCPDVPPGLVGRVV---IEFTSPMPLE 116

Query: 251 TVESPN 234
            V+  N
Sbjct: 117 RVQREN 122

>FEOB2_PORGI (Q7MVL1) Ferrous iron transport protein B homolog|
          Length = 725

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 346 CNGRLPPDFVSEALGLPPLVPAYL 417
           CNGR P   +   + L P VPAYL
Sbjct: 470 CNGRWPTQILLATIFLTPAVPAYL 493

>T3MO_BPP1 (P08763) Type III restriction-modification system EcoPI enzyme mod|
           (EC 2.1.1.72) (EcoPI methyltransferase) (M.EcoPI)
          Length = 646

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
 Frame = +1

Query: 328 GATGRFCNGRL---PPDFVSEAL 387
           G T  FCNGRL    P+F SEAL
Sbjct: 570 GYTAHFCNGRLYLIAPNFTSEAL 592

>SSB_PSEAE (P40947) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 164

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 398 GGRPSASETKSGGSRPLQNRPVAPPCRSRP 309
           GGRPS  +++     P+Q    AP  +SRP
Sbjct: 112 GGRPSGDDSQRAPREPMQRPQQAPQQQSRP 141


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,281,832
Number of Sequences: 219361
Number of extensions: 497372
Number of successful extensions: 2253
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2249
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)