>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 1e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 1       acgctccaatggcagccacggcggtgaccctgcc 34
               ||||||||||||| |||||||| |||||||||||
Sbjct: 1414972 acgctccaatggcggccacggctgtgaccctgcc 1414939

>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11,
             from chromosome 3, complete sequence
          Length = 147806

 Score = 52.0 bits (26), Expect = 1e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 1     acgctccaatggcagccacggcggtgaccctgcc 34
             ||||||||||||| |||||||| |||||||||||
Sbjct: 76475 acgctccaatggcggccacggctgtgaccctgcc 76442

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 1e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 1       acgctccaatggcagccacggcggtgaccctgcc 34
               ||||||||||||| |||||||| |||||||||||
Sbjct: 1414970 acgctccaatggcggccacggctgtgaccctgcc 1414937

>dbj|AK104137.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H07,
          full insert sequence
          Length = 1009

 Score = 52.0 bits (26), Expect = 1e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 1  acgctccaatggcagccacggcggtgaccctgcc 34
          ||||||||||||| |||||||| |||||||||||
Sbjct: 1  acgctccaatggcggccacggctgtgaccctgcc 34

>dbj|AK098999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N22,
          full insert sequence
          Length = 1011

 Score = 52.0 bits (26), Expect = 1e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 1  acgctccaatggcagccacggcggtgaccctgcc 34
          ||||||||||||| |||||||| |||||||||||
Sbjct: 8  acgctccaatggcggccacggctgtgaccctgcc 41

>dbj|AK072141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122I07, full
            insert sequence
          Length = 2916

 Score = 52.0 bits (26), Expect = 1e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 1    acgctccaatggcagccacggcggtgaccctgcc 34
            ||||||||||||| |||||||| |||||||||||
Sbjct: 1106 acgctccaatggcggccacggctgtgaccctgcc 1073

>dbj|AK070779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072F09,
          full insert sequence
          Length = 1044

 Score = 52.0 bits (26), Expect = 1e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 1  acgctccaatggcagccacggcggtgaccctgcc 34
          ||||||||||||| |||||||| |||||||||||
Sbjct: 30 acgctccaatggcggccacggctgtgaccctgcc 63

>dbj|AK059557.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G09,
          full insert sequence
          Length = 1013

 Score = 52.0 bits (26), Expect = 1e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 1  acgctccaatggcagccacggcggtgaccctgcc 34
          ||||||||||||| |||||||| |||||||||||
Sbjct: 5  acgctccaatggcggccacggctgtgaccctgcc 38

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 0.44
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      gctccaatggcagccacggc 22
              ||||||||||||||||||||
Sbjct: 458494 gctccaatggcagccacggc 458513

>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 38.2 bits (19), Expect = 1.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 31      tgcccacctcggcgccgtc 49
               |||||||||||||||||||
Sbjct: 2072606 tgcccacctcggcgccgtc 2072624

>emb|BX842608.1|OSJN00298 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1340F09, complete
             sequence
          Length = 149449

 Score = 38.2 bits (19), Expect = 1.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     ctccaatggcagccacggc 22
             |||||||||||||||||||
Sbjct: 66659 ctccaatggcagccacggc 66677

>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09,
             complete sequence
          Length = 155672

 Score = 38.2 bits (19), Expect = 1.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     ctccaatggcagccacggc 22
             |||||||||||||||||||
Sbjct: 19018 ctccaatggcagccacggc 19036

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 1.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 4       ctccaatggcagccacggc 22
               |||||||||||||||||||
Sbjct: 1723707 ctccaatggcagccacggc 1723725

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 13      cagccacggcggtgaccc 30
               ||||||||||||||||||
Sbjct: 2991946 cagccacggcggtgaccc 2991963

>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14
          Length = 307550

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 13     cagccacggcggtgaccc 30
              ||||||||||||||||||
Sbjct: 136138 cagccacggcggtgaccc 136155

>gb|AY186602.1| Chlamydomonas reinhardtii long flagella (LF3) gene, complete cds
          Length = 7467

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 11  ggcagccacggcggtgac 28
           ||||||||||||||||||
Sbjct: 865 ggcagccacggcggtgac 848

>ref|XM_504948.1| Yarrowia lipolytica CLIB122, YALI0F03454g predicted mRNA
          Length = 2772

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 19  cggcggtgaccctgccca 36
           ||||||||||||||||||
Sbjct: 569 cggcggtgaccctgccca 586

>ref|XM_506031.1| Yarrowia lipolytica CLIB122, YALI0F30019g predicted mRNA
          Length = 3954

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 3   gctccaatggcagccacggcgg 24
           |||| |||||||||||||||||
Sbjct: 107 gctcgaatggcagccacggcgg 86

>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13
          Length = 346051

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 13     cagccacggcggtgaccc 30
              ||||||||||||||||||
Sbjct: 223966 cagccacggcggtgaccc 223983

>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 34     ccacctcggcgccgtcgc 51
              ||||||||||||||||||
Sbjct: 150266 ccacctcggcgccgtcgc 150283

>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 34    ccacctcggcgccgtcgc 51
             ||||||||||||||||||
Sbjct: 87852 ccacctcggcgccgtcgc 87835

>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 34    ccacctcggcgccgtcgc 51
             ||||||||||||||||||
Sbjct: 25874 ccacctcggcgccgtcgc 25891

>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 16      ccacggcggtgaccctgc 33
               ||||||||||||||||||
Sbjct: 2412996 ccacggcggtgaccctgc 2412979

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 19      cggcggtgaccctgccca 36
               ||||||||||||||||||
Sbjct: 2993699 cggcggtgaccctgccca 2993682

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 12       gcagccacggcggtgacc 29
                ||||||||||||||||||
Sbjct: 15717145 gcagccacggcggtgacc 15717162

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 34      ccacctcggcgccgtcgc 51
               ||||||||||||||||||
Sbjct: 4688515 ccacctcggcgccgtcgc 4688532



 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 30      ctgcccacctcggcgccg 47
               ||||||||||||||||||
Sbjct: 4410744 ctgcccacctcggcgccg 4410761



 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 34      ccacctcggcgccgtcgc 51
               ||||||||||||||||||
Sbjct: 1289192 ccacctcggcgccgtcgc 1289209

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 34      ccacctcggcgccgtcgc 51
               ||||||||||||||||||
Sbjct: 3603322 ccacctcggcgccgtcgc 3603305

>dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0404D10
          Length = 155069

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 12    gcagccacggcggtgacc 29
             ||||||||||||||||||
Sbjct: 31601 gcagccacggcggtgacc 31618

>gb|AC124442.3| Mus musculus BAC clone RP24-178G20 from 7, complete sequence
          Length = 177517

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 5      tccaatggcagccacggc 22
              ||||||||||||||||||
Sbjct: 147495 tccaatggcagccacggc 147512

>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 36.2 bits (18), Expect = 6.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 3       gctccaatggcagccacggcgg 24
               |||| |||||||||||||||||
Sbjct: 3756746 gctcgaatggcagccacggcgg 3756725



 Score = 36.2 bits (18), Expect = 6.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 19     cggcggtgaccctgccca 36
              ||||||||||||||||||
Sbjct: 489665 cggcggtgaccctgccca 489648


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 451,799
Number of Sequences: 3902068
Number of extensions: 451799
Number of successful extensions: 138646
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136871
Number of HSP's gapped (non-prelim): 1775
length of query: 51
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 31
effective length of database: 17,155,003,908
effective search space: 531805121148
effective search space used: 531805121148
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)