ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet125f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 65 3e-13
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 53 1e-09
3TSP17_CAEEL (Q11098) Tetraspanin-17 30 1.7
4LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglyc... 30 2.9
5GCAT_AERHY (P10480) Phosphatidylcholine-sterol acyltransferase p... 29 3.8
6HUNB_SCAAL (O46254) Protein hunchback (Fragments) 29 5.0
7HUNB_DROCR (O46236) Protein hunchback (Fragments) 29 5.0
8DCDA_METJA (Q58497) Diaminopimelate decarboxylase (EC 4.1.1.20) ... 28 8.6

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 65.1 bits (157), Expect(2) = 3e-13
 Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +2

Query: 239 PPCGETFFGRATCRCSDGRLVVDFLAEKFGLPLLKPSKQG-GADFKKGANMAIIGAT 406
           PP GETFF R+T R SDGRL++DF+AE F LP L P     G++FK GA+ A  G+T
Sbjct: 57  PPYGETFFHRSTGRYSDGRLIIDFIAESFNLPYLSPYLSSLGSNFKHGADFATAGST 113



 Score = 27.7 bits (60), Expect(2) = 3e-13
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 93  LVALAMVASSCFLAVSGQKFNAIYSFGDSMSDTG 194
           +++LA  + +C        F AI++FGDS SDTG
Sbjct: 20  MLSLAYASETC-------DFPAIFNFGDSNSDTG 46



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 52.8 bits (125), Expect(2) = 1e-09
 Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = +2

Query: 239 PPCGETFFGRATCRCSDGRLVVDFLAEKFGLPLLKPSKQG-GADFKKGANMAIIGA 403
           PP G +FFG    R  DGRLV+DF+AE  GLP L       G++F  GAN A  G+
Sbjct: 53  PPHGSSFFGSPAGRYCDGRLVIDFIAESLGLPYLSAFLDSVGSNFSHGANFATAGS 108



 Score = 28.1 bits (61), Expect(2) = 1e-09
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +3

Query: 150 FNAIYSFGDSMSDTGNL 200
           F AI++FGDS SDTG L
Sbjct: 28  FPAIFNFGDSNSDTGGL 44



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>TSP17_CAEEL (Q11098) Tetraspanin-17|
          Length = 243

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 37  SHSRCSELASQRQWRRP-RCSWRLRWWPRHASW 132
           S++RC ++ + RQWR    CS RL  W     W
Sbjct: 174 SYARCQQIGANRQWRHAVGCSERLMSWFNEQIW 206



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>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 645

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 93  LVALAMVASSCFLAVSGQKFNAIYSFGDSMSDTGN 197
           + A  M+A S     +   +N +Y FGDS+SD GN
Sbjct: 6   IFAPGMLALSISAISNAHAYNNLYVFGDSLSDGGN 40



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>GCAT_AERHY (P10480) Phosphatidylcholine-sterol acyltransferase precursor (EC|
           2.3.1.43) (Glycerophospholipid-cholesterol
           acyltransferase) (GCAT)
          Length = 335

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +3

Query: 102 LAMVASSCFLAVSGQKFNAIYSFGDSMSDTGNL 200
           L +VA +   A S   F+ I  FGDS+SDTG +
Sbjct: 9   LGLVALTVQAADSRPAFSRIVMFGDSLSDTGKM 41



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>HUNB_SCAAL (O46254) Protein hunchback (Fragments)|
          Length = 171

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 3   PPNLPSVEQSLLPLPVLRASQPATMASSPLLVALAMVA 116
           PP LP+  Q ++P  +  A+QP    ++P   + A+VA
Sbjct: 84  PPGLPNPMQIIMPANMRPATQPTPTIATPTTTSSAIVA 121



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>HUNB_DROCR (O46236) Protein hunchback (Fragments)|
          Length = 190

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 3   PPNLPSVEQSLLPLPVLRASQPATMASSPLLVALAMVA 116
           PP LP+  Q ++P  +  A+QP    ++P   + A+VA
Sbjct: 103 PPGLPNPMQIIMPANMRPATQPTPTIATPTTTSSAIVA 140



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>DCDA_METJA (Q58497) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP|
           decarboxylase)
          Length = 438

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
 Frame = +2

Query: 257 FFGRATCRCSDGRLVVDF-----LAEKFGLPLLKPSKQ 355
           F G  T    DGR  +D      LAEKFG PL   S++
Sbjct: 5   FLGNDTVEIKDGRFFIDGYDAIELAEKFGTPLYVMSEE 42


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,466,045
Number of Sequences: 219361
Number of extensions: 624358
Number of successful extensions: 2807
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2805
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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