ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet125e05 |
|---|---|
| Clone Library Name | barley_pub |
>YP74_CAEEL (Q09221) Hypothetical protein B0228.4| Length = 1633 Score = 58.9 bits (141), Expect = 4e-09 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNVFSF---HPDNSPCHGFEEVLACYRNVVPHLRLSWPTSF 171 FD D IP +GFGD D+ +F+ + C+GFEEVL Y V P + +S PT+F Sbjct: 1452 FDADGQIPAYGFGDEEFTDHGIFNIAERYDLEKDCNGFEEVLRVYNEVTPTIEMSGPTNF 1511 Query: 172 APIVE 186 P+++ Sbjct: 1512 VPLID 1516
>CPNE1_MOUSE (Q8C166) Copine-1 (Copine I)| Length = 536 Score = 57.0 bits (136), Expect = 1e-08 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 5/66 (7%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNV-----FSFHPDNSPCHGFEEVLACYRNVVPHLRLSWPT 165 +D D L P FGFG D+ V +F+P N C G + ++ YR +P +RL PT Sbjct: 329 YDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPT 388 Query: 166 SFAPIV 183 +FAPI+ Sbjct: 389 NFAPII 394
>CPNE1_HUMAN (Q99829) Copine-1 (Copine I)| Length = 537 Score = 57.0 bits (136), Expect = 1e-08 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 5/66 (7%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNV-----FSFHPDNSPCHGFEEVLACYRNVVPHLRLSWPT 165 +D D L P FGFG D+ V +F+P N C G + ++ YR +P +RL PT Sbjct: 330 YDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPT 389 Query: 166 SFAPIV 183 +FAPI+ Sbjct: 390 NFAPII 395
>CPNE3_MOUSE (Q8BT60) Copine-3 (Copine III)| Length = 533 Score = 53.9 bits (128), Expect = 1e-07 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 5/66 (7%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNV-----FSFHPDNSPCHGFEEVLACYRNVVPHLRLSWPT 165 +D D + P FGFG + V +F+P N C+G + ++ YR +P +RL PT Sbjct: 336 YDADKMFPAFGFGAQVPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRTCLPQIRLYGPT 395 Query: 166 SFAPIV 183 +F+PI+ Sbjct: 396 NFSPII 401
>CPNE4_MOUSE (Q8BLR2) Copine-4 (Copine IV)| Length = 557 Score = 52.8 bits (125), Expect = 3e-07 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 5/67 (7%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNV-----FSFHPDNSPCHGFEEVLACYRNVVPHLRLSWPT 165 +D D + P FGFG +Y V +F+ DN C G + V+ Y++ +P L+L PT Sbjct: 352 YDSDKMFPAFGFGARIPPEYTVSHDFAINFNEDNPECAGIQGVVEAYQSCLPKLQLYGPT 411 Query: 166 SFAPIVE 186 + API++ Sbjct: 412 NIAPIIQ 418
>CPNE4_HUMAN (Q96A23) Copine-4 (Copine IV) (Copine-8)| Length = 557 Score = 52.8 bits (125), Expect = 3e-07 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 5/67 (7%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNV-----FSFHPDNSPCHGFEEVLACYRNVVPHLRLSWPT 165 +D D + P FGFG +Y V +F+ DN C G + V+ Y++ +P L+L PT Sbjct: 352 YDSDKMFPAFGFGARIPPEYTVSHDFAINFNEDNPECAGIQGVVEAYQSCLPKLQLYGPT 411 Query: 166 SFAPIVE 186 + API++ Sbjct: 412 NIAPIIQ 418
>CPNE3_PONPY (Q5RAE1) Copine-3 (Copine III)| Length = 537 Score = 52.8 bits (125), Expect = 3e-07 Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 5/66 (7%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNV-----FSFHPDNSPCHGFEEVLACYRNVVPHLRLSWPT 165 +D D + P FGFG + V +F+P N C+G + ++ YR+ +P ++L PT Sbjct: 336 YDADKMFPAFGFGAQIPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRSCLPQIKLYGPT 395 Query: 166 SFAPIV 183 +F+PI+ Sbjct: 396 NFSPII 401
>CPNE3_HUMAN (O75131) Copine-3 (Copine III)| Length = 537 Score = 52.8 bits (125), Expect = 3e-07 Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 5/66 (7%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNV-----FSFHPDNSPCHGFEEVLACYRNVVPHLRLSWPT 165 +D D + P FGFG + V +F+P N C+G + ++ YR+ +P ++L PT Sbjct: 336 YDADKMFPAFGFGAQIPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRSCLPQIKLYGPT 395 Query: 166 SFAPIV 183 +F+PI+ Sbjct: 396 NFSPII 401
>CPNE2_MOUSE (P59108) Copine-2 (Copine II)| Length = 548 Score = 50.1 bits (118), Expect = 2e-06 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNV-----FSFHPDNSPCHGFEEVLACYRNVVPHLRLSWPT 165 +D D + P GFG D+ V +F+P N C G + + Y +PH+R PT Sbjct: 352 YDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPT 411 Query: 166 SFAPIV 183 +F+PIV Sbjct: 412 NFSPIV 417
>CPNE2_HUMAN (Q96FN4) Copine-2 (Copine II)| Length = 548 Score = 50.1 bits (118), Expect = 2e-06 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNV-----FSFHPDNSPCHGFEEVLACYRNVVPHLRLSWPT 165 +D D + P GFG D+ V +F+P N C G + + Y +PH+R PT Sbjct: 352 YDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPT 411 Query: 166 SFAPIV 183 +F+PIV Sbjct: 412 NFSPIV 417
>CPNE6_PONPY (Q5R4W6) Copine-6 (Copine VI)| Length = 557 Score = 49.7 bits (117), Expect = 2e-06 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%) Frame = +1 Query: 1 FDEDNLIPCFGFGD------STTHDYNVFSFHPDNSPCHGFEEVLACYRNVVPHLRLSWP 162 +D D P FGFG +HD+ + +F P+N C V+A YR +P ++L P Sbjct: 351 YDSDKRFPAFGFGARIPPNFEVSHDFAI-NFDPENPECEEISGVIASYRRCLPQIQLYGP 409 Query: 163 TSFAPIV 183 T+ API+ Sbjct: 410 TNVAPII 416
>CPNE6_MOUSE (Q9Z140) Copine-6 (Copine VI) (Neuronal-copine) (N-copine)| Length = 557 Score = 49.7 bits (117), Expect = 2e-06 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%) Frame = +1 Query: 1 FDEDNLIPCFGFGD------STTHDYNVFSFHPDNSPCHGFEEVLACYRNVVPHLRLSWP 162 +D D P FGFG +HD+ + +F P+N C V+A YR +P ++L P Sbjct: 351 YDSDKRFPAFGFGARIPPNFEVSHDFAI-NFDPENPECEEISGVIASYRRCLPQIQLYGP 409 Query: 163 TSFAPIV 183 T+ API+ Sbjct: 410 TNVAPII 416
>CPNE6_HUMAN (O95741) Copine-6 (Copine VI) (Neuronal-copine) (N-copine)| Length = 557 Score = 49.7 bits (117), Expect = 2e-06 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%) Frame = +1 Query: 1 FDEDNLIPCFGFGD------STTHDYNVFSFHPDNSPCHGFEEVLACYRNVVPHLRLSWP 162 +D D P FGFG +HD+ + +F P+N C V+A YR +P ++L P Sbjct: 351 YDSDKRFPAFGFGARIPPNFEVSHDFAI-NFDPENPECEEISGVIASYRRCLPQIQLYGP 409 Query: 163 TSFAPIV 183 T+ API+ Sbjct: 410 TNVAPII 416
>CPNE7_HUMAN (Q9UBL6) Copine-7 (Copine VII)| Length = 633 Score = 45.8 bits (107), Expect = 3e-05 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 6/67 (8%) Frame = +1 Query: 1 FDEDNLIPCFGFGD------STTHDYNVFSFHPDNSPCHGFEEVLACYRNVVPHLRLSWP 162 +D D GFG +HD+ + +F+P++ C G + V+ Y+N +P ++L P Sbjct: 427 YDSDKRFSALGFGARIPPKYEVSHDFAI-NFNPEDDECEGIQGVVEAYQNCLPRVQLYGP 485 Query: 163 TSFAPIV 183 T+ API+ Sbjct: 486 TNVAPII 492
>CPNE8_MOUSE (Q9DC53) Copine-8 (Copine VIII)| Length = 564 Score = 41.6 bits (96), Expect = 6e-04 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNV-----FSFHPDNSPCHGFEEVLACYRNVVPHLRLSWPT 165 +D D + P GFG D + + +P N C G E V+ Y + ++L PT Sbjct: 354 YDSDKMFPALGFGAKLPPDGRISHEFALNGNPQNPYCDGIEGVMEAYYRSLKSVQLYGPT 413 Query: 166 SFAPIV 183 +FAP++ Sbjct: 414 NFAPVI 419
>CPNE8_HUMAN (Q86YQ8) Copine-8 (Copine VIII)| Length = 564 Score = 41.6 bits (96), Expect = 6e-04 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNV-----FSFHPDNSPCHGFEEVLACYRNVVPHLRLSWPT 165 +D D + P GFG D + + +P N C G E V+ Y + ++L PT Sbjct: 354 YDSDKMFPALGFGAKLPPDGRISHEFALNGNPQNPYCDGIEGVMEAYYRSLKSVQLYGPT 413 Query: 166 SFAPIV 183 +FAP++ Sbjct: 414 NFAPVI 419
>CPNE5_MOUSE (Q8JZW4) Copine-5 (Copine V)| Length = 593 Score = 40.4 bits (93), Expect = 0.001 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNVFSFHP-----DNSPCHGFEEVLACYRNVVPHLRLSWPT 165 +D D + P GFG D V P +N C G + +L Y + + ++L PT Sbjct: 373 YDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGILEAYHSSLRTVQLYGPT 432 Query: 166 SFAPIV 183 +FAP+V Sbjct: 433 NFAPVV 438
>CPNE5_HUMAN (Q9HCH3) Copine-5 (Copine V)| Length = 593 Score = 40.0 bits (92), Expect = 0.002 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 5/66 (7%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNVFSFHP-----DNSPCHGFEEVLACYRNVVPHLRLSWPT 165 +D D + P GFG D V P +N C G + +L Y + ++L PT Sbjct: 373 YDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGILEAYHRSLRTVQLYGPT 432 Query: 166 SFAPIV 183 +FAP+V Sbjct: 433 NFAPVV 438
>YGJI_CAEEL (Q9XUB9) Hypothetical protein T28F3.1 in chromosome IV| Length = 634 Score = 35.4 bits (80), Expect = 0.042 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 5/67 (7%) Frame = +1 Query: 1 FDEDNLIPCFGFGDSTTHDYNVFSFHP-----DNSPCHGFEEVLACYRNVVPHLRLSWPT 165 ++ FGFG + +V + P S G V+ YR+ + +++L PT Sbjct: 383 YNSSKTFEAFGFGAKLPNQSSVSAIFPLDLQRGTSEVVGITGVMTAYRHALSNVQLYGPT 442 Query: 166 SFAPIVE 186 +FAPI+E Sbjct: 443 NFAPIIE 449 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,993,263 Number of Sequences: 219361 Number of extensions: 307685 Number of successful extensions: 721 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 704 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 704 length of database: 80,573,946 effective HSP length: 38 effective length of database: 72,238,228 effective search space used: 1733717472 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
