ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet125c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CAAL_PSEPK (Q88HV0) Carboxylate-amine ligase PP3253 (EC 6.3.-.-) 30 1.4

>CAAL_PSEPK (Q88HV0) Carboxylate-amine ligase PP3253 (EC 6.3.-.-)|
          Length = 368

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = -2

Query: 146 PWL-----LTRSS*LCPPRPLRALGWRLVLCGVWPSRGTNRVL 33
           PWL     L+ SS L   +P   L +R V+CG WP  G    L
Sbjct: 149 PWLPLLLALSTSSPLWAGQPTGYLSYRRVICGEWPHMGLPEAL 191


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,267,424
Number of Sequences: 219361
Number of extensions: 311118
Number of successful extensions: 742
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 80,573,946
effective HSP length: 27
effective length of database: 74,651,199
effective search space used: 1791628776
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top