| Clone Name | baet124e10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104137.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H07, full insert sequence Length = 1009 Score = 184 bits (93), Expect = 1e-43 Identities = 138/153 (90%) Strand = Plus / Plus Query: 186 ggcatcatcctcgtcgaccccgccgaggcgcagaaggtgcaccgcctcaagaccgtctac 245 |||||| |||||||||||||| ||||||| ||||||||||||||||||||| | || ||| Sbjct: 195 ggcatcgtcctcgtcgaccccaccgaggcacagaaggtgcaccgcctcaaggctgtatac 254 Query: 246 gacaccaaggtcgtacccatcatcaccgaggagttcggctacaccaatgtccaccaggtg 305 ||| ||||| || ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 gaccagaaggtggtccccctcatcaccgaggagttcggctacaccaatgtccaccaggtg 314 Query: 306 cccaagcttgagaagattgtggtgaactgcggg 338 |||||| ||||||||||||| ||||| |||||| Sbjct: 315 cccaaggttgagaagattgtagtgaattgcggg 347 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acgctccaatggcagccacggcggtgaccctgcc 34 ||||||||||||| |||||||| ||||||||||| Sbjct: 1 acgctccaatggcggccacggctgtgaccctgcc 34
>dbj|AK098999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N22, full insert sequence Length = 1011 Score = 184 bits (93), Expect = 1e-43 Identities = 138/153 (90%) Strand = Plus / Plus Query: 186 ggcatcatcctcgtcgaccccgccgaggcgcagaaggtgcaccgcctcaagaccgtctac 245 |||||| |||||||||||||| ||||||| ||||||||||||||||||||| | || ||| Sbjct: 202 ggcatcgtcctcgtcgaccccaccgaggcacagaaggtgcaccgcctcaaggctgtatac 261 Query: 246 gacaccaaggtcgtacccatcatcaccgaggagttcggctacaccaatgtccaccaggtg 305 ||| ||||| || ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 gaccagaaggtggtccccctcatcaccgaggagttcggctacaccaatgtccaccaggtg 321 Query: 306 cccaagcttgagaagattgtggtgaactgcggg 338 |||||| ||||||||||||| ||||| |||||| Sbjct: 322 cccaaggttgagaagattgtagtgaattgcggg 354 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acgctccaatggcagccacggcggtgaccctgcc 34 ||||||||||||| |||||||| ||||||||||| Sbjct: 8 acgctccaatggcggccacggctgtgaccctgcc 41
>dbj|AK072141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122I07, full insert sequence Length = 2916 Score = 184 bits (93), Expect = 1e-43 Identities = 138/153 (90%) Strand = Plus / Minus Query: 186 ggcatcatcctcgtcgaccccgccgaggcgcagaaggtgcaccgcctcaagaccgtctac 245 |||||| |||||||||||||| ||||||| ||||||||||||||||||||| | || ||| Sbjct: 912 ggcatcgtcctcgtcgaccccaccgaggcacagaaggtgcaccgcctcaaggctgtatac 853 Query: 246 gacaccaaggtcgtacccatcatcaccgaggagttcggctacaccaatgtccaccaggtg 305 ||| ||||| || ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 852 gaccagaaggtggtccccctcatcaccgaggagttcggctacaccaatgtccaccaggtg 793 Query: 306 cccaagcttgagaagattgtggtgaactgcggg 338 |||||| ||||||||||||| ||||| |||||| Sbjct: 792 cccaaggttgagaagattgtagtgaattgcggg 760 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 1 acgctccaatggcagccacggcggtgaccctgcc 34 ||||||||||||| |||||||| ||||||||||| Sbjct: 1106 acgctccaatggcggccacggctgtgaccctgcc 1073
>dbj|AK070779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072F09, full insert sequence Length = 1044 Score = 184 bits (93), Expect = 1e-43 Identities = 138/153 (90%) Strand = Plus / Plus Query: 186 ggcatcatcctcgtcgaccccgccgaggcgcagaaggtgcaccgcctcaagaccgtctac 245 |||||| |||||||||||||| ||||||| ||||||||||||||||||||| | || ||| Sbjct: 224 ggcatcgtcctcgtcgaccccaccgaggcacagaaggtgcaccgcctcaaggctgtatac 283 Query: 246 gacaccaaggtcgtacccatcatcaccgaggagttcggctacaccaatgtccaccaggtg 305 ||| ||||| || ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 gaccagaaggtggtccccctcatcaccgaggagttcggctacaccaatgtccaccaggtg 343 Query: 306 cccaagcttgagaagattgtggtgaactgcggg 338 |||||| ||||||||||||| ||||| |||||| Sbjct: 344 cccaaggttgagaagattgtagtgaattgcggg 376 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acgctccaatggcagccacggcggtgaccctgcc 34 ||||||||||||| |||||||| ||||||||||| Sbjct: 30 acgctccaatggcggccacggctgtgaccctgcc 63
>dbj|AK059557.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G09, full insert sequence Length = 1013 Score = 184 bits (93), Expect = 1e-43 Identities = 138/153 (90%) Strand = Plus / Plus Query: 186 ggcatcatcctcgtcgaccccgccgaggcgcagaaggtgcaccgcctcaagaccgtctac 245 |||||| |||||||||||||| ||||||| ||||||||||||||||||||| | || ||| Sbjct: 199 ggcatcgtcctcgtcgaccccaccgaggcacagaaggtgcaccgcctcaaggctgtatac 258 Query: 246 gacaccaaggtcgtacccatcatcaccgaggagttcggctacaccaatgtccaccaggtg 305 ||| ||||| || ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 gaccagaaggtggtccccctcatcaccgaggagttcggctacaccaatgtccaccaggtg 318 Query: 306 cccaagcttgagaagattgtggtgaactgcggg 338 |||||| ||||||||||||| ||||| |||||| Sbjct: 319 cccaaggttgagaagattgtagtgaattgcggg 351 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acgctccaatggcagccacggcggtgaccctgcc 34 ||||||||||||| |||||||| ||||||||||| Sbjct: 5 acgctccaatggcggccacggctgtgaccctgcc 38
>gb|AF095708.1|AF095708 Oryza sativa clone LS101 50S ribosomal protein L5 (rpl5) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 1025 Score = 184 bits (93), Expect = 1e-43 Identities = 138/153 (90%) Strand = Plus / Plus Query: 186 ggcatcatcctcgtcgaccccgccgaggcgcagaaggtgcaccgcctcaagaccgtctac 245 |||||| |||||||||||||| ||||||| ||||||||||||||||||||| | || ||| Sbjct: 191 ggcatcgtcctcgtcgaccccaccgaggcacagaaggtgcaccgcctcaaggctgtatac 250 Query: 246 gacaccaaggtcgtacccatcatcaccgaggagttcggctacaccaatgtccaccaggtg 305 ||| ||||| || ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 gaccagaaggtggtccccctcatcaccgaggagttcggctacaccaatgtccaccaggtg 310 Query: 306 cccaagcttgagaagattgtggtgaactgcggg 338 |||||| ||||||||||||| ||||| |||||| Sbjct: 311 cccaaggttgagaagattgtagtgaattgcggg 343
>gb|BT018226.1| Zea mays clone EL01N0561F09.c mRNA sequence Length = 923 Score = 163 bits (82), Expect = 5e-37 Identities = 165/193 (85%) Strand = Plus / Plus Query: 181 cctccggcatcatcctcgtcgaccccgccgaggcgcagaaggtgcaccgcctcaagaccg 240 ||||||||||| | ||||||||||| |||| || |||||||||||||| |||||| ||| Sbjct: 77 cctccggcatcgtgctcgtcgacccatccgaagcccagaaggtgcaccggctcaaggccg 136 Query: 241 tctacgacaccaaggtcgtacccatcatcaccgaggagttcggctacaccaatgtccacc 300 |||||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 137 tctacgaccagaaggtcgtcccgctcatcaccgaggagttcggctacaccaatgtccacc 196 Query: 301 aggtgcccaagcttgagaagattgtggtgaactgcgggctgngggtggatgccgggaaca 360 |||| |||||| || |||||||||||||||||||| ||| | | ||| || |||||| Sbjct: 197 aggttcccaagttttttaagattgtggtgaactgcggtctgggcgcggaggcagggaact 256 Query: 361 acaagggtctgga 373 |||||| ||||| Sbjct: 257 ccaaggggctgga 269
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 143 bits (72), Expect = 5e-31 Identities = 108/120 (90%) Strand = Plus / Minus Query: 186 ggcatcatcctcgtcgaccccgccgaggcgcagaaggtgcaccgcctcaagaccgtctac 245 |||||| |||||||||||||| ||||||| ||||||||||||||||||||| | || ||| Sbjct: 1414778 ggcatcgtcctcgtcgaccccaccgaggcacagaaggtgcaccgcctcaaggctgtatac 1414719 Query: 246 gacaccaaggtcgtacccatcatcaccgaggagttcggctacaccaatgtccaccaggtg 305 ||| ||||| || ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1414718 gaccagaaggtggtccccctcatcaccgaggagttcggctacaccaatgtccaccaggtg 1414659 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 300 caggtgcccaagcttgagaagattgtggtgaactgcggg 338 |||||||||||| ||||||||||||| ||||| |||||| Sbjct: 1414531 caggtgcccaaggttgagaagattgtagtgaattgcggg 1414493 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 1 acgctccaatggcagccacggcggtgaccctgcc 34 ||||||||||||| |||||||| ||||||||||| Sbjct: 1414972 acgctccaatggcggccacggctgtgaccctgcc 1414939 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Minus Query: 59 cgtcgccgcctcctccgcccgccgctgcctcc 90 ||||||||||||| ||||| |||||||||||| Sbjct: 1940069 cgtcgccgcctccgccgcctgccgctgcctcc 1940038 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ccgcctcctccgcccgccgc 83 |||||||||||||||||||| Sbjct: 30511072 ccgcctcctccgcccgccgc 30511053 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccgtcgccgcctcctccgcc 77 |||||||||||||||||||| Sbjct: 27332249 ccgtcgccgcctcctccgcc 27332268
>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11, from chromosome 3, complete sequence Length = 147806 Score = 143 bits (72), Expect = 5e-31 Identities = 108/120 (90%) Strand = Plus / Minus Query: 186 ggcatcatcctcgtcgaccccgccgaggcgcagaaggtgcaccgcctcaagaccgtctac 245 |||||| |||||||||||||| ||||||| ||||||||||||||||||||| | || ||| Sbjct: 76281 ggcatcgtcctcgtcgaccccaccgaggcacagaaggtgcaccgcctcaaggctgtatac 76222 Query: 246 gacaccaaggtcgtacccatcatcaccgaggagttcggctacaccaatgtccaccaggtg 305 ||| ||||| || ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 76221 gaccagaaggtggtccccctcatcaccgaggagttcggctacaccaatgtccaccaggtg 76162 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 300 caggtgcccaagcttgagaagattgtggtgaactgcggg 338 |||||||||||| ||||||||||||| ||||| |||||| Sbjct: 76034 caggtgcccaaggttgagaagattgtagtgaattgcggg 75996 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 1 acgctccaatggcagccacggcggtgaccctgcc 34 ||||||||||||| |||||||| ||||||||||| Sbjct: 76475 acgctccaatggcggccacggctgtgaccctgcc 76442
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 143 bits (72), Expect = 5e-31 Identities = 108/120 (90%) Strand = Plus / Minus Query: 186 ggcatcatcctcgtcgaccccgccgaggcgcagaaggtgcaccgcctcaagaccgtctac 245 |||||| |||||||||||||| ||||||| ||||||||||||||||||||| | || ||| Sbjct: 1414776 ggcatcgtcctcgtcgaccccaccgaggcacagaaggtgcaccgcctcaaggctgtatac 1414717 Query: 246 gacaccaaggtcgtacccatcatcaccgaggagttcggctacaccaatgtccaccaggtg 305 ||| ||||| || ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1414716 gaccagaaggtggtccccctcatcaccgaggagttcggctacaccaatgtccaccaggtg 1414657 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 300 caggtgcccaagcttgagaagattgtggtgaactgcggg 338 |||||||||||| ||||||||||||| ||||| |||||| Sbjct: 1414529 caggtgcccaaggttgagaagattgtagtgaattgcggg 1414491 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 1 acgctccaatggcagccacggcggtgaccctgcc 34 ||||||||||||| |||||||| ||||||||||| Sbjct: 1414970 acgctccaatggcggccacggctgtgaccctgcc 1414937 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Minus Query: 59 cgtcgccgcctcctccgcccgccgctgcctcc 90 ||||||||||||| ||||| |||||||||||| Sbjct: 1940067 cgtcgccgcctccgccgcctgccgctgcctcc 1940036 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ccgcctcctccgcccgccgc 83 |||||||||||||||||||| Sbjct: 30602494 ccgcctcctccgcccgccgc 30602475 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccgtcgccgcctcctccgcc 77 |||||||||||||||||||| Sbjct: 27423572 ccgtcgccgcctcctccgcc 27423591
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 62 cgccgcctcctccgcccgccgctgcctcc 90 ||||||||||||||| ||||||||||||| Sbjct: 16684671 cgccgcctcctccgcgcgccgctgcctcc 16684699
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0047B10 Length = 158798 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 62 cgccgcctcctccgcccgccgctgcctcc 90 ||||||||||||||| ||||||||||||| Sbjct: 33365 cgccgcctcctccgcgcgccgctgcctcc 33393
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1596_C06 Length = 124721 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 62 cgccgcctcctccgcccgccgctgcctcc 90 ||||||||||||||| ||||||||||||| Sbjct: 92810 cgccgcctcctccgcgcgccgctgcctcc 92838
>ref|XM_470194.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1869 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 59 cgtcgccgcctcctccgcccgccgctgcctcc 90 ||||||||||||| ||||| |||||||||||| Sbjct: 66 cgtcgccgcctccgccgcctgccgctgcctcc 97
>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06, complete sequence Length = 122218 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 59 cgtcgccgcctcctccgcccgccgctgcctcc 90 ||||||||||||| ||||| |||||||||||| Sbjct: 35342 cgtcgccgcctccgccgcctgccgctgcctcc 35373
>dbj|AK100737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118C14, full insert sequence Length = 2292 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 59 cgtcgccgcctcctccgcccgccgctgcctcc 90 ||||||||||||| ||||| |||||||||||| Sbjct: 147 cgtcgccgcctccgccgcctgccgctgcctcc 178
>ref|NM_197207.1| Oryza sativa (japonica cultivar-group) putative leaf protein (OSJNBa0078O01.25), mRNA Length = 1638 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 55 tccccgtcgccgcctcctccgcc 77 ||||||||||||||||||||||| Sbjct: 85 tccccgtcgccgcctcctccgcc 107
>gb|BC107002.1| Mus musculus cDNA clone IMAGE:40045387 Length = 1233 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 299 ccaggtgcccaagcttgagaaga 321 ||||||||||||||||||||||| Sbjct: 603 ccaggtgcccaagcttgagaaga 581
>ref|XM_988846.1| PREDICTED: Mus musculus ephrin A3 (Efna3), mRNA Length = 2363 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 299 ccaggtgcccaagcttgagaaga 321 ||||||||||||||||||||||| Sbjct: 717 ccaggtgcccaagcttgagaaga 739
>ref|XM_892839.2| PREDICTED: Mus musculus ephrin A3 (Efna3), mRNA Length = 2363 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 299 ccaggtgcccaagcttgagaaga 321 ||||||||||||||||||||||| Sbjct: 717 ccaggtgcccaagcttgagaaga 739
>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete sequence Length = 146664 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 55 tccccgtcgccgcctcctccgcc 77 ||||||||||||||||||||||| Sbjct: 96072 tccccgtcgccgcctcctccgcc 96094
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 274 aggagttcggctacaccaatgtccaccaggtgccc 308 ||||||| ||||||||||| |||||||||||||| Sbjct: 2705847 aggagttgggctacaccaacatccaccaggtgccc 2705881
>dbj|AK140090.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230209I18 product:hypothetical protein, full insert sequence Length = 1845 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 299 ccaggtgcccaagcttgagaaga 321 ||||||||||||||||||||||| Sbjct: 108 ccaggtgcccaagcttgagaaga 86
>gb|AC159612.1| Zea mays chromosome 5S clone ZMMBBb0511I12 map bin: 5.00, complete sequence Length = 50000 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 ccgccgctgcctccagctcctcc 99 ||||||||||||||||||||||| Sbjct: 15695 ccgccgctgcctccagctcctcc 15717
>dbj|AK020438.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430025D14 product:ephrin A3, full insert sequence Length = 1085 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 299 ccaggtgcccaagcttgagaaga 321 ||||||||||||||||||||||| Sbjct: 23 ccaggtgcccaagcttgagaaga 45
>gb|AY045577.1| Rattus norvegicus ephrin A3 mRNA, partial cds Length = 355 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 299 ccaggtgcccaagcttgagaaga 321 ||||||||||||||||||||||| Sbjct: 321 ccaggtgcccaagcttgagaaga 343
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 55 tccccgtcgccgcctcctccgcc 77 ||||||||||||||||||||||| Sbjct: 18592261 tccccgtcgccgcctcctccgcc 18592283 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ccgcctcctccgcccgccgctgcc 87 |||||||||| ||||||||||||| Sbjct: 17201771 ccgcctcctctgcccgccgctgcc 17201748
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 40 cggcgccgtcgcccttccccgtcgccg 66 |||||||||||||||||||| |||||| Sbjct: 8786987 cggcgccgtcgcccttccccttcgccg 8787013 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 accgcctcaagaccgtctac 245 |||||||||||||||||||| Sbjct: 13112791 accgcctcaagaccgtctac 13112810
>dbj|AP005768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039C01 Length = 151054 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 40 cggcgccgtcgcccttccccgtcgccg 66 |||||||||||||||||||| |||||| Sbjct: 145628 cggcgccgtcgcccttccccttcgccg 145654
>dbj|AP005051.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458G06 Length = 139109 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 40 cggcgccgtcgcccttccccgtcgccg 66 |||||||||||||||||||| |||||| Sbjct: 17087 cggcgccgtcgcccttccccttcgccg 17113
>dbj|AK103198.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122A05, full insert sequence Length = 2625 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 55 tccccgtcgccgcctcctccgcc 77 ||||||||||||||||||||||| Sbjct: 153 tccccgtcgccgcctcctccgcc 175
>gb|AC104632.10| Mus musculus strain C57BL/6J clone rp23-368d24 map 3, complete sequence Length = 210499 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 299 ccaggtgcccaagcttgagaaga 321 ||||||||||||||||||||||| Sbjct: 93236 ccaggtgcccaagcttgagaaga 93258
>gb|U92885.1|U92885 Mus musculus LERK-3 (Epl3) gene, partial cds Length = 2535 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 299 ccaggtgcccaagcttgagaaga 321 ||||||||||||||||||||||| Sbjct: 2133 ccaggtgcccaagcttgagaaga 2155
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 55 tccccgtcgccgcctcctccgcc 77 ||||||||||||||||||||||| Sbjct: 18603114 tccccgtcgccgcctcctccgcc 18603136 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ccgcctcctccgcccgccgctgcc 87 |||||||||| ||||||||||||| Sbjct: 17210811 ccgcctcctctgcccgccgctgcc 17210788
>gb|AC132327.3| Mus musculus BAC clone RP24-194O6 from 3, complete sequence Length = 174267 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 299 ccaggtgcccaagcttgagaaga 321 ||||||||||||||||||||||| Sbjct: 172944 ccaggtgcccaagcttgagaaga 172922
>gb|AC171273.1| Mus musculus BAC clone RP23-137J12 from chromosome 3, complete sequence Length = 234363 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 299 ccaggtgcccaagcttgagaaga 321 ||||||||||||||||||||||| Sbjct: 226628 ccaggtgcccaagcttgagaaga 226650
>ref|NM_004952.3| Homo sapiens ephrin-A3 (EFNA3), mRNA Length = 1798 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 caggtgcccaagcttgagaaga 321 |||||||||||||||||||||| Sbjct: 680 caggtgcccaagcttgagaaga 701
>ref|XM_513847.1| PREDICTED: Pan troglodytes LOC457355 (LOC457355), mRNA Length = 1635 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 caggtgcccaagcttgagaaga 321 |||||||||||||||||||||| Sbjct: 1528 caggtgcccaagcttgagaaga 1549
>gb|BT019473.1| Synthetic construct Homo sapiens ephrin-A3 mRNA, partial cds Length = 717 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 caggtgcccaagcttgagaaga 321 |||||||||||||||||||||| Sbjct: 610 caggtgcccaagcttgagaaga 631
>gb|BC017722.1| Homo sapiens ephrin-A3, mRNA (cDNA clone MGC:21335 IMAGE:4397263), complete cds Length = 1769 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 caggtgcccaagcttgagaaga 321 |||||||||||||||||||||| Sbjct: 680 caggtgcccaagcttgagaaga 701
>gb|AC130724.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0409G01, complete sequence Length = 143263 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 gtcgccgcctcctccgcccgccgctg 85 ||||||||||||||||||||| |||| Sbjct: 101374 gtcgccgcctcctccgcccgcagctg 101349
>emb|AL691442.32| Human DNA sequence from clone RP11-540D14 on chromosome 1 Contains the 3' end of the ADAM15 gene for a disintegrin and metalloproteinase domain 15 (metargidin), the EFNA4 gene for ephrin-A4, the EFNA3 gene for ephrin-A3, the EFNA1 gene for ephrin-A1, the gene for a novel protein (LOC55974), the DPM3 gene for dolichyl-phosphate mannosyltransferase polypeptide 3 and four CpG islands, complete sequence Length = 92095 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 caggtgcccaagcttgagaaga 321 |||||||||||||||||||||| Sbjct: 34708 caggtgcccaagcttgagaaga 34729
>emb|CR607482.1| full-length cDNA clone CS0DN003YL19 of Adult brain of Homo sapiens (human) Length = 1741 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 caggtgcccaagcttgagaaga 321 |||||||||||||||||||||| Sbjct: 674 caggtgcccaagcttgagaaga 695
>emb|CR597504.1| full-length cDNA clone CS0DI026YI24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1629 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 caggtgcccaagcttgagaaga 321 |||||||||||||||||||||| Sbjct: 564 caggtgcccaagcttgagaaga 585
>gb|U14187.1|HSU14187 Homo sapiens LERK-3 (EPLG3) mRNA, complete cds Length = 987 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 caggtgcccaagcttgagaaga 321 |||||||||||||||||||||| Sbjct: 667 caggtgcccaagcttgagaaga 688
>emb|BX929339.2| Gallus gallus finished cDNA, clone ChEST184h18 Length = 711 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 62 cgccgcctcctccgcccgccgc 83 |||||||||||||||||||||| Sbjct: 37 cgccgcctcctccgcccgccgc 16
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 gtcgccgcctcctccgcccgccgctg 85 ||||||||||||||||||||| |||| Sbjct: 13730315 gtcgccgcctcctccgcccgcagctg 13730290 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 46 cgtcgcccttccccgtcgccgcctcctc 73 ||||||||||| ||||||||||| |||| Sbjct: 28935607 cgtcgcccttctccgtcgccgccgcctc 28935580
>gb|AY891091.1| Synthetic construct Homo sapiens clone FLH007220.01L ephrin-A3 (EFNA3) mRNA, partial cds Length = 717 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 caggtgcccaagcttgagaaga 321 |||||||||||||||||||||| Sbjct: 610 caggtgcccaagcttgagaaga 631
>gb|L37360.1|HUMEFL2 Homo sapiens (clone hEHK1-L) EHK1 receptor tyrosine kinase ligand (EFL-2) mRNA, complete cds Length = 758 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 caggtgcccaagcttgagaaga 321 |||||||||||||||||||||| Sbjct: 616 caggtgcccaagcttgagaaga 637
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtcgaccccgccgaggcgcag 218 ||||||||||||||||||||| Sbjct: 1208625 gtcgaccccgccgaggcgcag 1208605
>gb|BC074413.1| Xenopus laevis MGC84429 protein, mRNA (cDNA clone MGC:84429 IMAGE:7019528), complete cds Length = 998 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 ctcctccgcccgccgctgcct 88 ||||||||||||||||||||| Sbjct: 457 ctcctccgcccgccgctgcct 437
>gb|BC073509.1| Xenopus laevis hypothetical protein LOC443653, mRNA (cDNA clone IMAGE:5155543), partial cds Length = 1594 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cctcctccgcccgccgctgcc 87 ||||||||||||||||||||| Sbjct: 130 cctcctccgcccgccgctgcc 110
>ref|XM_804288.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511537.69) partial mRNA Length = 745 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ccgccgctgcctccagctcct 97 ||||||||||||||||||||| Sbjct: 599 ccgccgctgcctccagctcct 579
>emb|BX914196.10| Zebrafish DNA sequence from clone DKEYP-71E8 in linkage group 7, complete sequence Length = 166715 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 caatgtccaccaggtgcccaa 310 ||||||||||||||||||||| Sbjct: 52212 caatgtccaccaggtgcccaa 52192
>ref|NM_001003573.1| Danio rerio zgc:101065 (zgc:101065), mRNA Length = 1270 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 caatgtccaccaggtgcccaa 310 ||||||||||||||||||||| Sbjct: 101 caatgtccaccaggtgcccaa 121
>gb|AC161467.2| Gallus gallus BAC clone CH261-89H14 from chromosome unknown, complete sequence Length = 308703 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 55 tccccgtcgccgcctcctccgcccgccgc 83 |||||||||||||| ||||||||| |||| Sbjct: 226643 tccccgtcgccgccgcctccgccccccgc 226615
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 cgccgctgcctccagctcctccgct 102 |||||||||||||| |||||||||| Sbjct: 11210047 cgccgctgcctccacctcctccgct 11210023 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 49 cgcccttccccgtcgccgcctcctccgcc 77 |||||||| |||||||||||||| ||||| Sbjct: 6218027 cgcccttcgccgtcgccgcctccgccgcc 6217999
>dbj|AP006166.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1435D02 Length = 131152 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 cgccgctgcctccagctcctccgct 102 |||||||||||||| |||||||||| Sbjct: 25346 cgccgctgcctccacctcctccgct 25322
>dbj|AP005748.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0042E12 Length = 164688 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 cgccgctgcctccagctcctccgct 102 |||||||||||||| |||||||||| Sbjct: 84869 cgccgctgcctccacctcctccgct 84845
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 49 cgcccttccccgtcgccgcctcctccgcc 77 |||||||| |||||||||||||| ||||| Sbjct: 131846 cgcccttcgccgtcgccgcctccgccgcc 131818
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 49 cgcccttccccgtcgccgcctcctccgcc 77 |||||||| |||||||||||||| ||||| Sbjct: 12103 cgcccttcgccgtcgccgcctccgccgcc 12075
>gb|BC078202.1| Danio rerio zgc:101065, mRNA (cDNA clone MGC:101065 IMAGE:7152585), complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 caatgtccaccaggtgcccaa 310 ||||||||||||||||||||| Sbjct: 101 caatgtccaccaggtgcccaa 121
>dbj|AK063324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H05, full insert sequence Length = 1808 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 49 cgcccttccccgtcgccgcctcctccgcc 77 |||||||| |||||||||||||| ||||| Sbjct: 1461 cgcccttcgccgtcgccgcctccgccgcc 1433
>gb|AY845024.1| Xenopus laevis macoilin mRNA, complete cds Length = 2777 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cctcctccgcccgccgctgcc 87 ||||||||||||||||||||| Sbjct: 184 cctcctccgcccgccgctgcc 164
>gb|AC157953.2| Gallus gallus BAC clone CH261-93C23 from chromosome unknown, complete sequence Length = 231813 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 55 tccccgtcgccgcctcctccgcccgccgc 83 |||||||||||||| ||||||||| |||| Sbjct: 27135 tccccgtcgccgccgcctccgccccccgc 27107
>ref|XM_493799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1671 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ccgcctcctccgcccgccgc 83 |||||||||||||||||||| Sbjct: 43 ccgcctcctccgcccgccgc 24
>ref|XM_475974.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2100 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 46 cgtcgcccttccccgtcgccgcctcctc 73 ||||||||||| ||||||||||| |||| Sbjct: 1249 cgtcgcccttctccgtcgccgccgcctc 1222
>ref|XM_418667.1| PREDICTED: Gallus gallus similar to epsilon-sarcoglycan (LOC420567), mRNA Length = 1630 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 cgccgcctcctccgcccgccgctgcctc 89 |||||| ||||||||||||||| ||||| Sbjct: 47 cgccgcatcctccgcccgccgccgcctc 20
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccgtcgccgcctcctccgcc 77 |||||||||||||||||||| Sbjct: 32456 ccgtcgccgcctcctccgcc 32475
>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009C07, complete sequence Length = 148731 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 46 cgtcgcccttccccgtcgccgcctcctc 73 ||||||||||| ||||||||||| |||| Sbjct: 89900 cgtcgcccttctccgtcgccgccgcctc 89873
>gb|AC068006.10| Mus musculus chromosome 7, clone RP23-6I17, complete sequence Length = 203141 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 tccccgtcgccgcctcctccgccc 78 |||||||| ||||||||||||||| Sbjct: 54735 tccccgtctccgcctcctccgccc 54758
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 gctccaatggcagccacggc 22 |||||||||||||||||||| Sbjct: 458494 gctccaatggcagccacggc 458513
>ref|NM_001017036.2| Xenopus tropicalis NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4 (ndufb4), mRNA Length = 516 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cctcctccgcccgccgctgc 86 |||||||||||||||||||| Sbjct: 119 cctcctccgcccgccgctgc 100
>emb|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 bp, chromosome 7 Length = 281000 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 tccccgtcgccgcctcctccgccc 78 |||||||| ||||||||||||||| Sbjct: 168142 tccccgtctccgcctcctccgccc 168119
>gb|AC098642.5| Genomic sequence for Mus musculus, clone RP23-270O7, complete sequence Length = 188834 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 44 gccgtcgcccttccccgtcgccgcctcc 71 |||| |||||||||||| |||||||||| Sbjct: 90116 gccgccgcccttccccgccgccgcctcc 90143
>gb|AE011728.1| Xanthomonas axonopodis pv. citri str. 306, section 106 of 469 of the complete genome Length = 11339 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 aggagttcggctacaccaat 293 |||||||||||||||||||| Sbjct: 6033 aggagttcggctacaccaat 6052
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ccgcctcctccgcccgccgc 83 |||||||||||||||||||| Sbjct: 42645 ccgcctcctccgcccgccgc 42626
>gb|AC078893.10| Oryza sativa chromosome 10 BAC OSJNBb0044B19 genomic sequence, complete sequence Length = 81784 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 ccgcctcctccgcccgccgctgcc 87 |||||||||| ||||||||||||| Sbjct: 45829 ccgcctcctctgcccgccgctgcc 45852
>ref|XM_684238.1| PREDICTED: Danio rerio similar to multiple PDZ domain protein (LOC560839), mRNA Length = 2286 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 ctcctccgcccgccgctgcctcca 91 ||||||| |||||||||||||||| Sbjct: 1372 ctcctccccccgccgctgcctcca 1395
>gb|AC157328.2| Mus musculus BAC clone RP23-230P11 from chromosome 9, complete sequence Length = 206694 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ccaggtgcccaagcttgaga 318 |||||||||||||||||||| Sbjct: 2097 ccaggtgcccaagcttgaga 2078
>gb|AC156832.2| Mus musculus BAC clone RP24-212B22 from chromosome 9, complete sequence Length = 181683 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ccaggtgcccaagcttgaga 318 |||||||||||||||||||| Sbjct: 131302 ccaggtgcccaagcttgaga 131283
>gb|AC146538.2| Gasterosteus aculeatus clone CH213-118G22, complete sequence Length = 211945 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 cgccgcctcctccgcccgcc 81 |||||||||||||||||||| Sbjct: 80153 cgccgcctcctccgcccgcc 80172
>emb|BX950342.2| Gallus gallus finished cDNA, clone ChEST169e19 Length = 1914 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 cgccgcctcctccgcccgccgctgcctc 89 |||||| ||||||||||||||| ||||| Sbjct: 51 cgccgcatcctccgcccgccgccgcctc 24
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ccgcctcctccgcccgccgc 83 |||||||||||||||||||| Sbjct: 24241614 ccgcctcctccgcccgccgc 24241595 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 accgcctcaagaccgtctac 245 |||||||||||||||||||| Sbjct: 23949026 accgcctcaagaccgtctac 23949045 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cgcctcctccgcccgccgct 84 |||||||||||||||||||| Sbjct: 19789758 cgcctcctccgcccgccgct 19789739 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cgcctcctccgcccgccgct 84 |||||||||||||||||||| Sbjct: 1347905 cgcctcctccgcccgccgct 1347886
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccgtcgccgcctcctccgcc 77 |||||||||||||||||||| Sbjct: 22733824 ccgtcgccgcctcctccgcc 22733843
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 227 ccgcctcaagaccgtctacgacaccaaggtcg 258 |||||| ||||||||||||||| |||| |||| Sbjct: 3130286 ccgcctgaagaccgtctacgaccccaatgtcg 3130255
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 ccgtcgccgcctcctccgcccgcc 81 |||||||||||||| ||||||||| Sbjct: 56722 ccgtcgccgcctccgccgcccgcc 56745
>dbj|AP005168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066B06 Length = 154025 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 accgcctcaagaccgtctac 245 |||||||||||||||||||| Sbjct: 31118 accgcctcaagaccgtctac 31137
>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0024F06 Length = 129402 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccgtcgccgcctcctccgcc 77 |||||||||||||||||||| Sbjct: 110536 ccgtcgccgcctcctccgcc 110555
>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0712E02 Length = 158084 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccgtcgccgcctcctccgcc 77 |||||||||||||||||||| Sbjct: 51213 ccgtcgccgcctcctccgcc 51232
>emb|BX000461.4| Zebrafish DNA sequence from clone DKEY-170E5, complete sequence Length = 170304 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 ctcctccgcccgccgctgcctcca 91 ||||||| |||||||||||||||| Sbjct: 87927 ctcctccccccgccgctgcctcca 87950
>dbj|AK107091.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-H01, full insert sequence Length = 2265 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 46 cgtcgcccttccccgtcgccgcctcctc 73 ||||||||||| ||||||||||| |||| Sbjct: 1309 cgtcgcccttctccgtcgccgccgcctc 1282
>dbj|AK070433.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054B12, full insert sequence Length = 3664 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ccgcctcctccgcccgccgc 83 |||||||||||||||||||| Sbjct: 186 ccgcctcctccgcccgccgc 167
>emb|CT963096.1| M.spretus DNA sequence from clone XX-CH35_391C2 on chromosome 7, complete sequence Length = 164625 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 tccccgtcgccgcctcctccgccc 78 |||||||| ||||||||||||||| Sbjct: 126114 tccccgtctccgcctcctccgccc 126137
>gb|AY104770.1| Zea mays PCO074909 mRNA sequence Length = 3628 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 cgccgcctcctccgcccgcc 81 |||||||||||||||||||| Sbjct: 158 cgccgcctcctccgcccgcc 177
>emb|CR761952.2| Xenopus tropicalis finished cDNA, clone TNeu040m07 Length = 516 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cctcctccgcccgccgctgc 86 |||||||||||||||||||| Sbjct: 119 cctcctccgcccgccgctgc 100
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ccgcctcctccgcccgccgc 83 |||||||||||||||||||| Sbjct: 24169820 ccgcctcctccgcccgccgc 24169801 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 accgcctcaagaccgtctac 245 |||||||||||||||||||| Sbjct: 23877232 accgcctcaagaccgtctac 23877251 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cgcctcctccgcccgccgct 84 |||||||||||||||||||| Sbjct: 19715972 cgcctcctccgcccgccgct 19715953 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cgcctcctccgcccgccgct 84 |||||||||||||||||||| Sbjct: 1347905 cgcctcctccgcccgccgct 1347886
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ccgcctcctccgcccgccgc 83 |||||||||||||||||||| Sbjct: 126305 ccgcctcctccgcccgccgc 126286
>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135793 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ccgcctcctccgcccgccgc 83 |||||||||||||||||||| Sbjct: 18388 ccgcctcctccgcccgccgc 18369
>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144767 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 accgcctcaagaccgtctac 245 |||||||||||||||||||| Sbjct: 24155 accgcctcaagaccgtctac 24136
>emb|AL713931.5|CNS07YP8 Oryza sativa chromosome 12, . BAC OSJNBa0035B12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161160 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cgcctcctccgcccgccgct 84 |||||||||||||||||||| Sbjct: 66644 cgcctcctccgcccgccgct 66625
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 accgcctcaagaccgtctac 245 |||||||||||||||||||| Sbjct: 138370 accgcctcaagaccgtctac 138351
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 cgcctcctccgcccgccgct 84 |||||||||||||||||||| Sbjct: 81264 cgcctcctccgcccgccgct 81283
>emb|AL603682.36| Mouse DNA sequence from clone RP23-235J5 on chromosome 11, complete sequence Length = 211680 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 44 gccgtcgcccttccccgtcgccgcctcc 71 |||| |||||||||||| |||||||||| Sbjct: 15363 gccgccgcccttccccgccgccgcctcc 15336
>gb|M30947.1|CHPRGIT Chimpanzee rRNA gene internal transcribed spacer 1 (ITS1) Length = 1051 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 57 cccgtcgccgcctcctccgcccgccgct 84 ||||||||||||||| |||| ||||||| Sbjct: 412 cccgtcgccgcctccgccgcgcgccgct 439
>dbj|AP001294.1| Mus musculus genomic DNA, chromosome 7, clone:B385, complete sequence Length = 86661 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 tccccgtcgccgcctcctccgccc 78 |||||||| ||||||||||||||| Sbjct: 31013 tccccgtctccgcctcctccgccc 30990 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,267,060 Number of Sequences: 3902068 Number of extensions: 2267060 Number of successful extensions: 85970 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 117 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84393 Number of HSP's gapped (non-prelim): 1577 length of query: 373 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 351 effective length of database: 17,147,199,772 effective search space: 6018667119972 effective search space used: 6018667119972 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)