ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet124e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PER30_ARATH (Q9LSY7) Peroxidase 30 precursor (EC 1.11.1.7) (Atpe... 31 0.98
2PER55_ARATH (Q96509) Peroxidase 55 precursor (EC 1.11.1.7) (Atpe... 30 1.3
3PER3_ARATH (O23044) Peroxidase 3 precursor (EC 1.11.1.7) (Atpero... 28 8.3
4PER59_ARATH (Q39034) Peroxidase 59 precursor (EC 1.11.1.7) (Atpe... 28 8.3

>PER30_ARATH (Q9LSY7) Peroxidase 30 precursor (EC 1.11.1.7) (Atperox P30)|
           (PRXR9) (ATP7a)
          Length = 329

 Score = 30.8 bits (68), Expect = 0.98
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 149 EGQLSPNFHAATCPDLERIVEFHV 220
           E QL  NF+A +CP+ E+I+  H+
Sbjct: 26  EAQLQMNFYAKSCPNAEKIISDHI 49



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>PER55_ARATH (Q96509) Peroxidase 55 precursor (EC 1.11.1.7) (Atperox P55)|
           (ATP20a)
          Length = 330

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +2

Query: 155 QLSPNFHAATCPDLERIVEFHVAETFR 235
           QLS N++A+TCP +E IV+  V   F+
Sbjct: 31  QLSENYYASTCPSVELIVKQAVTTKFK 57



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>PER3_ARATH (O23044) Peroxidase 3 precursor (EC 1.11.1.7) (Atperox P3) (Rare|
           cold-inducible protein) (RCI3A) (ATPRC)
          Length = 326

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +2

Query: 149 EGQLSPNFHAATCPDLERIVEFHVA 223
           + QL  NF+A +CP+ E+IV+  V+
Sbjct: 23  QAQLQMNFYANSCPNAEKIVQDFVS 47



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>PER59_ARATH (Q39034) Peroxidase 59 precursor (EC 1.11.1.7) (Atperox P59)|
           (Peroxidase N) (ATPN)
          Length = 328

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 155 QLSPNFHAATCPDLERIVEFHVA 223
           QLSP+ +A +CP+L +IV   VA
Sbjct: 29  QLSPDIYAKSCPNLVQIVRKQVA 51


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,917,900
Number of Sequences: 219361
Number of extensions: 261554
Number of successful extensions: 759
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 80,573,946
effective HSP length: 54
effective length of database: 68,728,452
effective search space used: 1649482848
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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