| Clone Name | baet124d01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY857758.1| Triticum monococcum peroxidase 4 (POX4) mRNA, complete cds Length = 1281 Score = 56.0 bits (28), Expect = 2e-05 Identities = 45/50 (90%), Gaps = 3/50 (6%) Strand = Plus / Plus Query: 43 agccatggcctctacttcgtccctatcagtcgtgttgctcttgtgcctgg 92 ||||||||||| ||||||| ||||||| |||||||||||||||||||| Sbjct: 51 agccatggcct---cttcgtctctatcagccgtgttgctcttgtgcctgg 97
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagccatggcctctacttcg 61 ||||||||||||||||||||| Sbjct: 2267669 gaagccatggcctctacttcg 2267689
>emb|AL360006.15| Human DNA sequence from clone RP11-528D17 on chromosome 1, complete sequence Length = 113420 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agaaagaagccatggcctct 55 |||||||||||||||||||| Sbjct: 111554 agaaagaagccatggcctct 111573
>emb|AL356357.22| Human DNA sequence from clone RP4-550F15 on chromosome 1 Contains the KCNK1 gene for potassium channel subfamily K member 1 and one CpG island, complete sequence Length = 71371 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agaaagaagccatggcctct 55 |||||||||||||||||||| Sbjct: 134 agaaagaagccatggcctct 153
>gb|AC154760.2| Mus musculus BAC clone RP24-414E6 from chromosome 14, complete sequence Length = 163089 Score = 38.2 bits (19), Expect = 4.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 gtgttgctcttgtgcctgg 92 ||||||||||||||||||| Sbjct: 79248 gtgttgctcttgtgcctgg 79230
>gb|AC121341.2| Homo sapiens X BAC RP11-655M17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177245 Score = 38.2 bits (19), Expect = 4.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 acgttggctagaaagaagc 45 ||||||||||||||||||| Sbjct: 25627 acgttggctagaaagaagc 25645
>emb|AL683894.6| Mouse DNA sequence from clone RP23-109G18 on chromosome 4, complete sequence Length = 201246 Score = 38.2 bits (19), Expect = 4.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 tggctagaaagaagccatg 49 ||||||||||||||||||| Sbjct: 138476 tggctagaaagaagccatg 138494 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 594,947 Number of Sequences: 3902068 Number of extensions: 594947 Number of successful extensions: 37456 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 37441 Number of HSP's gapped (non-prelim): 15 length of query: 92 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 71 effective length of database: 17,151,101,840 effective search space: 1217728230640 effective search space used: 1217728230640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)