| Clone Name | baet124b05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 Length = 833 Score = 396 bits (200), Expect = e-107 Identities = 272/296 (91%) Strand = Plus / Plus Query: 35 atggccaacgcaatgttgctccctgtgcttatctccttcctcatcctgcccttctccgcc 94 |||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||| Sbjct: 31 atggccaacgcaatgttgctccctgtcctcatctccttcctcgtcctgcccttctccgcc 90 Query: 95 ctggccctgacccaggacttctgcgtggccgacctggcatgccccgacacgcccgctggg 154 ||||||||||||||||||||||||| ||||||||| | ||| ||||||||| || ||| Sbjct: 91 atggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgccggcgggg 150 Query: 155 tacccgtgcaagccgggcgtcggcgcgggcgacttctactaccacggcctggccaccgcc 214 |||||||||||| | |||||||||||||| ||||||||||||||||| || ||| |||| Sbjct: 151 tacccgtgcaagaccggcgtcggcgcgggggacttctactaccacggtctcgccgccgcg 210 Query: 215 ggcaacaccagcaacctcatcaaggcggccgtcacaccggccttcgtcggccagttcccc 274 |||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||| Sbjct: 211 ggcaacaccagcaacctcatcaaggcggtcgtaaccccggccttcgtcggccagttcccc 270 Query: 275 ggcgtgaacgggctcggcatctccgccgccaggctcgacatcgccgtcggcggcgt 330 |||||||||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 271 ggcgtgaacgggctcggcatctccgcggcgaggctcgacatcgccgtgggcggcgt 326
>emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diphosphate glucose pyrophosphatase (sagppase gene) Length = 639 Score = 396 bits (200), Expect = e-107 Identities = 272/296 (91%) Strand = Plus / Plus Query: 35 atggccaacgcaatgttgctccctgtgcttatctccttcctcatcctgcccttctccgcc 94 |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 1 atggccaacgcaatgttgctccctgtcctcgtctccttcctcgtcctgcccttctccgcc 60 Query: 95 ctggccctgacccaggacttctgcgtggccgacctggcatgccccgacacgcccgctggg 154 ||||||||||||||||||||||||| ||||||||| | ||| ||||||||| || ||| Sbjct: 61 atggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacgccggcgggg 120 Query: 155 tacccgtgcaagccgggcgtcggcgcgggcgacttctactaccacggcctggccaccgcc 214 |||||||||||| | |||||||||||||| |||||||||||||||||||| ||| |||| Sbjct: 121 tacccgtgcaagaccggcgtcggcgcgggggacttctactaccacggcctcgccgccgcg 180 Query: 215 ggcaacaccagcaacctcatcaaggcggccgtcacaccggccttcgtcggccagttcccc 274 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 181 ggcaacaccagcaacctcatcaaggcggccgtaaccccggccttcgtcggccagttcccc 240 Query: 275 ggcgtgaacgggctcggcatctccgccgccaggctcgacatcgccgtcggcggcgt 330 ||||||||||||||||||||||| || || ||||||||||||||||| |||||||| Sbjct: 241 ggcgtgaacgggctcggcatctctgcggcgaggctcgacatcgccgtgggcggcgt 296
>emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine diphosphate glucose pyrophosphatase Length = 642 Score = 365 bits (184), Expect = 6e-98 Identities = 268/296 (90%) Strand = Plus / Plus Query: 35 atggccaacgcaatgttgctccctgtgcttatctccttcctcatcctgcccttctccgcc 94 ||||||||||||||||||||||| ||||| ||||||||||| ||| |||||||||||||| Sbjct: 4 atggccaacgcaatgttgctccccgtgctcatctccttccttatcatgcccttctccgcc 63 Query: 95 ctggccctgacccaggacttctgcgtggccgacctggcatgccccgacacgcccgctggg 154 ||||||||||||||||||||||||| ||||||||| | ||| |||||| || || ||| Sbjct: 64 atggccctgacccaggacttctgcgtcgccgacctgtcctgcagcgacacaccggcgggg 123 Query: 155 tacccgtgcaagccgggcgtcggcgcgggcgacttctactaccacggcctggccaccgcc 214 |||||||||||| | |||||| |||| || |||||||||||||||||||| ||| |||| Sbjct: 124 tacccgtgcaaggccggcgtcagcgcaggggacttctactaccacggcctcgccgccgcg 183 Query: 215 ggcaacaccagcaacctcatcaaggcggccgtcacaccggccttcgtcggccagttcccc 274 |||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 184 ggcaacaccagcaacctcatcaaggcggccgtgaccccggccttcgtcgggcagttcccc 243 Query: 275 ggcgtgaacgggctcggcatctccgccgccaggctcgacatcgccgtcggcggcgt 330 |||||||||||||||||||||||||| || ||||||||||||||| | |||||||| Sbjct: 244 ggcgtgaacgggctcggcatctccgcagcgaggctcgacatcgccatgggcggcgt 299
>ref|XM_482788.1| Oryza sativa (japonica cultivar-group), mRNA Length = 938 Score = 256 bits (129), Expect = 4e-65 Identities = 231/265 (87%) Strand = Plus / Plus Query: 66 tctccttcctcatcctgcccttctccgccctggccctgacccaggacttctgcgtggccg 125 ||||||||||| | ||||| ||||| || |||| ||||| ||||| |||||||| |||| Sbjct: 136 tctccttcctcctgctgccattctcgtccatggcgctgacgcaggatttctgcgtcgccg 195 Query: 126 acctggcatgccccgacacgcccgctgggtacccgtgcaagccgggcgtcggcgcgggcg 185 ||||| | ||| ||||||||| || ||||||||||||||| | |||||||||| |||| Sbjct: 196 acctgacctgcagcgacacgccggcggggtacccgtgcaaggccagcgtcggcgccggcg 255 Query: 186 acttctactaccacggcctggccaccgccggcaacaccagcaacctcatcaaggcggccg 245 ||||| |||||||||||| || | || |||||||||||||||||||||||||| |||| Sbjct: 256 acttcgcctaccacggcctcgcggcggcgggcaacaccagcaacctcatcaaggccgccg 315 Query: 246 tcacaccggccttcgtcggccagttccccggcgtgaacgggctcggcatctccgccgcca 305 | || ||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 316 tgacgccggccttcgtcggccagttccccggcgtgaacgggctcggtatctccgcggcga 375 Query: 306 ggctcgacatcgccgtcggcggcgt 330 |||| |||||||||||||||||||| Sbjct: 376 ggctggacatcgccgtcggcggcgt 400
>ref|XM_507258.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.40 mRNA Length = 994 Score = 256 bits (129), Expect = 4e-65 Identities = 231/265 (87%) Strand = Plus / Plus Query: 66 tctccttcctcatcctgcccttctccgccctggccctgacccaggacttctgcgtggccg 125 ||||||||||| | ||||| ||||| || |||| ||||| ||||| |||||||| |||| Sbjct: 125 tctccttcctcctgctgccattctcgtccatggcgctgacgcaggatttctgcgtcgccg 184 Query: 126 acctggcatgccccgacacgcccgctgggtacccgtgcaagccgggcgtcggcgcgggcg 185 ||||| | ||| ||||||||| || ||||||||||||||| | |||||||||| |||| Sbjct: 185 acctgacctgcagcgacacgccggcggggtacccgtgcaaggccagcgtcggcgccggcg 244 Query: 186 acttctactaccacggcctggccaccgccggcaacaccagcaacctcatcaaggcggccg 245 ||||| |||||||||||| || | || |||||||||||||||||||||||||| |||| Sbjct: 245 acttcgcctaccacggcctcgcggcggcgggcaacaccagcaacctcatcaaggccgccg 304 Query: 246 tcacaccggccttcgtcggccagttccccggcgtgaacgggctcggcatctccgccgcca 305 | || ||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 305 tgacgccggccttcgtcggccagttccccggcgtgaacgggctcggtatctccgcggcga 364 Query: 306 ggctcgacatcgccgtcggcggcgt 330 |||| |||||||||||||||||||| Sbjct: 365 ggctggacatcgccgtcggcggcgt 389
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 256 bits (129), Expect = 4e-65 Identities = 231/265 (87%) Strand = Plus / Minus Query: 66 tctccttcctcatcctgcccttctccgccctggccctgacccaggacttctgcgtggccg 125 ||||||||||| | ||||| ||||| || |||| ||||| ||||| |||||||| |||| Sbjct: 22551668 tctccttcctcctgctgccattctcgtccatggcgctgacgcaggatttctgcgtcgccg 22551609 Query: 126 acctggcatgccccgacacgcccgctgggtacccgtgcaagccgggcgtcggcgcgggcg 185 ||||| | ||| ||||||||| || ||||||||||||||| | |||||||||| |||| Sbjct: 22551608 acctgacctgcagcgacacgccggcggggtacccgtgcaaggccagcgtcggcgccggcg 22551549 Query: 186 acttctactaccacggcctggccaccgccggcaacaccagcaacctcatcaaggcggccg 245 ||||| |||||||||||| || | || |||||||||||||||||||||||||| |||| Sbjct: 22551548 acttcgcctaccacggcctcgcggcggcgggcaacaccagcaacctcatcaaggccgccg 22551489 Query: 246 tcacaccggccttcgtcggccagttccccggcgtgaacgggctcggcatctccgccgcca 305 | || ||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 22551488 tgacgccggccttcgtcggccagttccccggcgtgaacgggctcggtatctccgcggcga 22551429 Query: 306 ggctcgacatcgccgtcggcggcgt 330 |||| |||||||||||||||||||| Sbjct: 22551428 ggctggacatcgccgtcggcggcgt 22551404 Score = 48.1 bits (24), Expect = 0.018 Identities = 33/36 (91%) Strand = Plus / Minus Query: 266 cagttccccggcgtgaacgggctcggcatctccgcc 301 |||| ||||| ||||||||| ||||||||||||||| Sbjct: 22546507 cagtaccccgccgtgaacggcctcggcatctccgcc 22546472
>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690E03 Length = 139924 Score = 256 bits (129), Expect = 4e-65 Identities = 231/265 (87%) Strand = Plus / Minus Query: 66 tctccttcctcatcctgcccttctccgccctggccctgacccaggacttctgcgtggccg 125 ||||||||||| | ||||| ||||| || |||| ||||| ||||| |||||||| |||| Sbjct: 25169 tctccttcctcctgctgccattctcgtccatggcgctgacgcaggatttctgcgtcgccg 25110 Query: 126 acctggcatgccccgacacgcccgctgggtacccgtgcaagccgggcgtcggcgcgggcg 185 ||||| | ||| ||||||||| || ||||||||||||||| | |||||||||| |||| Sbjct: 25109 acctgacctgcagcgacacgccggcggggtacccgtgcaaggccagcgtcggcgccggcg 25050 Query: 186 acttctactaccacggcctggccaccgccggcaacaccagcaacctcatcaaggcggccg 245 ||||| |||||||||||| || | || |||||||||||||||||||||||||| |||| Sbjct: 25049 acttcgcctaccacggcctcgcggcggcgggcaacaccagcaacctcatcaaggccgccg 24990 Query: 246 tcacaccggccttcgtcggccagttccccggcgtgaacgggctcggcatctccgccgcca 305 | || ||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 24989 tgacgccggccttcgtcggccagttccccggcgtgaacgggctcggtatctccgcggcga 24930 Query: 306 ggctcgacatcgccgtcggcggcgt 330 |||| |||||||||||||||||||| Sbjct: 24929 ggctggacatcgccgtcggcggcgt 24905 Score = 48.1 bits (24), Expect = 0.018 Identities = 33/36 (91%) Strand = Plus / Minus Query: 266 cagttccccggcgtgaacgggctcggcatctccgcc 301 |||| ||||| ||||||||| ||||||||||||||| Sbjct: 20008 cagtaccccgccgtgaacggcctcggcatctccgcc 19973
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 256 bits (129), Expect = 4e-65 Identities = 231/265 (87%) Strand = Plus / Minus Query: 66 tctccttcctcatcctgcccttctccgccctggccctgacccaggacttctgcgtggccg 125 ||||||||||| | ||||| ||||| || |||| ||||| ||||| |||||||| |||| Sbjct: 146596 tctccttcctcctgctgccattctcgtccatggcgctgacgcaggatttctgcgtcgccg 146537 Query: 126 acctggcatgccccgacacgcccgctgggtacccgtgcaagccgggcgtcggcgcgggcg 185 ||||| | ||| ||||||||| || ||||||||||||||| | |||||||||| |||| Sbjct: 146536 acctgacctgcagcgacacgccggcggggtacccgtgcaaggccagcgtcggcgccggcg 146477 Query: 186 acttctactaccacggcctggccaccgccggcaacaccagcaacctcatcaaggcggccg 245 ||||| |||||||||||| || | || |||||||||||||||||||||||||| |||| Sbjct: 146476 acttcgcctaccacggcctcgcggcggcgggcaacaccagcaacctcatcaaggccgccg 146417 Query: 246 tcacaccggccttcgtcggccagttccccggcgtgaacgggctcggcatctccgccgcca 305 | || ||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 146416 tgacgccggccttcgtcggccagttccccggcgtgaacgggctcggtatctccgcggcga 146357 Query: 306 ggctcgacatcgccgtcggcggcgt 330 |||| |||||||||||||||||||| Sbjct: 146356 ggctggacatcgccgtcggcggcgt 146332 Score = 48.1 bits (24), Expect = 0.018 Identities = 33/36 (91%) Strand = Plus / Minus Query: 266 cagttccccggcgtgaacgggctcggcatctccgcc 301 |||| ||||| ||||||||| ||||||||||||||| Sbjct: 141435 cagtaccccgccgtgaacggcctcggcatctccgcc 141400
>dbj|AK104729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C02, full insert sequence Length = 938 Score = 256 bits (129), Expect = 4e-65 Identities = 231/265 (87%) Strand = Plus / Plus Query: 66 tctccttcctcatcctgcccttctccgccctggccctgacccaggacttctgcgtggccg 125 ||||||||||| | ||||| ||||| || |||| ||||| ||||| |||||||| |||| Sbjct: 136 tctccttcctcctgctgccattctcgtccatggcgctgacgcaggatttctgcgtcgccg 195 Query: 126 acctggcatgccccgacacgcccgctgggtacccgtgcaagccgggcgtcggcgcgggcg 185 ||||| | ||| ||||||||| || ||||||||||||||| | |||||||||| |||| Sbjct: 196 acctgacctgcagcgacacgccggcggggtacccgtgcaaggccagcgtcggcgccggcg 255 Query: 186 acttctactaccacggcctggccaccgccggcaacaccagcaacctcatcaaggcggccg 245 ||||| |||||||||||| || | || |||||||||||||||||||||||||| |||| Sbjct: 256 acttcgcctaccacggcctcgcggcggcgggcaacaccagcaacctcatcaaggccgccg 315 Query: 246 tcacaccggccttcgtcggccagttccccggcgtgaacgggctcggcatctccgccgcca 305 | || ||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 316 tgacgccggccttcgtcggccagttccccggcgtgaacgggctcggtatctccgcggcga 375 Query: 306 ggctcgacatcgccgtcggcggcgt 330 |||| |||||||||||||||||||| Sbjct: 376 ggctggacatcgccgtcggcggcgt 400
>dbj|AK065284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M08, full insert sequence Length = 994 Score = 256 bits (129), Expect = 4e-65 Identities = 231/265 (87%) Strand = Plus / Plus Query: 66 tctccttcctcatcctgcccttctccgccctggccctgacccaggacttctgcgtggccg 125 ||||||||||| | ||||| ||||| || |||| ||||| ||||| |||||||| |||| Sbjct: 125 tctccttcctcctgctgccattctcgtccatggcgctgacgcaggatttctgcgtcgccg 184 Query: 126 acctggcatgccccgacacgcccgctgggtacccgtgcaagccgggcgtcggcgcgggcg 185 ||||| | ||| ||||||||| || ||||||||||||||| | |||||||||| |||| Sbjct: 185 acctgacctgcagcgacacgccggcggggtacccgtgcaaggccagcgtcggcgccggcg 244 Query: 186 acttctactaccacggcctggccaccgccggcaacaccagcaacctcatcaaggcggccg 245 ||||| |||||||||||| || | || |||||||||||||||||||||||||| |||| Sbjct: 245 acttcgcctaccacggcctcgcggcggcgggcaacaccagcaacctcatcaaggccgccg 304 Query: 246 tcacaccggccttcgtcggccagttccccggcgtgaacgggctcggcatctccgccgcca 305 | || ||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 305 tgacgccggccttcgtcggccagttccccggcgtgaacgggctcggtatctccgcggcga 364 Query: 306 ggctcgacatcgccgtcggcggcgt 330 |||| |||||||||||||||||||| Sbjct: 365 ggctggacatcgccgtcggcggcgt 389
>gb|AF032975.1|AF032975 Oryza sativa germin-like protein 5 (GER5) mRNA, complete cds Length = 1030 Score = 256 bits (129), Expect = 4e-65 Identities = 231/265 (87%) Strand = Plus / Plus Query: 66 tctccttcctcatcctgcccttctccgccctggccctgacccaggacttctgcgtggccg 125 ||||||||||| | ||||| ||||| || |||| ||||| ||||| |||||||| |||| Sbjct: 138 tctccttcctcctgctgccattctcgtccatggcgctgacgcaggatttctgcgtcgccg 197 Query: 126 acctggcatgccccgacacgcccgctgggtacccgtgcaagccgggcgtcggcgcgggcg 185 ||||| | ||| ||||||||| || ||||||||||||||| | |||||||||| |||| Sbjct: 198 acctgacctgcagcgacacgccggcggggtacccgtgcaaggccagcgtcggcgccggcg 257 Query: 186 acttctactaccacggcctggccaccgccggcaacaccagcaacctcatcaaggcggccg 245 ||||| |||||||||||| || | || |||||||||||||||||||||||||| |||| Sbjct: 258 acttcgcctaccacggcctcgcggcggcgggcaacaccagcaacctcatcaaggccgccg 317 Query: 246 tcacaccggccttcgtcggccagttccccggcgtgaacgggctcggcatctccgccgcca 305 | || ||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 318 tgaccccggccttcgtcggccagttccccggcgtgaacgggctcggtatctccgcggcga 377 Query: 306 ggctcgacatcgccgtcggcggcgt 330 |||| |||||||||||||||||||| Sbjct: 378 ggctggacatcgccgtcggcggcgt 402
>dbj|AB015593.1| Oryza sativa OsGLP1 gene for germin-like protein 1, complete cds Length = 642 Score = 256 bits (129), Expect = 4e-65 Identities = 231/265 (87%) Strand = Plus / Plus Query: 66 tctccttcctcatcctgcccttctccgccctggccctgacccaggacttctgcgtggccg 125 ||||||||||| | ||||| ||||| || |||| ||||| ||||| |||||||| |||| Sbjct: 35 tctccttcctcctgctgccattctcgtccatggcgctgacgcaggatttctgcgtcgccg 94 Query: 126 acctggcatgccccgacacgcccgctgggtacccgtgcaagccgggcgtcggcgcgggcg 185 ||||| | ||| ||||||||| || ||||||||||||||| | |||||||||| |||| Sbjct: 95 acctgacctgcagcgacacgccggcggggtacccgtgcaaggccagcgtcggcgccggcg 154 Query: 186 acttctactaccacggcctggccaccgccggcaacaccagcaacctcatcaaggcggccg 245 ||||| |||||||||||| || | || |||||||||||||||||||||||||| |||| Sbjct: 155 acttcgcctaccacggcctcgcggcggcgggcaacaccagcaacctcatcaaggccgccg 214 Query: 246 tcacaccggccttcgtcggccagttccccggcgtgaacgggctcggcatctccgccgcca 305 | || ||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 215 tgacgccggccttcgtcggccagttccccggcgtgaacgggctcggtatctccgcggcga 274 Query: 306 ggctcgacatcgccgtcggcggcgt 330 |||| |||||||||||||||||||| Sbjct: 275 ggctggacatcgccgtcggcggcgt 299
>gb|AF051156.1|AF051156 Oryza sativa germin-like protein (GLP110) mRNA, complete cds Length = 1004 Score = 248 bits (125), Expect = 1e-62 Identities = 230/265 (86%) Strand = Plus / Plus Query: 66 tctccttcctcatcctgcccttctccgccctggccctgacccaggacttctgcgtggccg 125 ||||||||||| | ||||| ||||| || |||| ||||| ||||| |||||||| |||| Sbjct: 117 tctccttcctcctgctgccattctcgtccatggcgctgacgcaggatttctgcgtcgccg 176 Query: 126 acctggcatgccccgacacgcccgctgggtacccgtgcaagccgggcgtcggcgcgggcg 185 ||||| | ||| ||||||||| || ||||||||||||||| | |||||||||| |||| Sbjct: 177 acctgacctgcagcgacacgccggcggggtacccgtgcaaggccagcgtcggcgccggcg 236 Query: 186 acttctactaccacggcctggccaccgccggcaacaccagcaacctcatcaaggcggccg 245 ||||| |||||||||||| || | || |||||||||||||||||||||||||| |||| Sbjct: 237 acttcgcctaccacggcctcgcggcggcgggcaacaccagcaacctcatcaaggccgccg 296 Query: 246 tcacaccggccttcgtcggccagttccccggcgtgaacgggctcggcatctccgccgcca 305 | || ||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 297 tgacgccggccttcgtcggccagttccccggcgtgaacgggctcggtatctccgcggcga 356 Query: 306 ggctcgacatcgccgtcggcggcgt 330 ||| |||||||||||||||||||| Sbjct: 357 agctggacatcgccgtcggcggcgt 381
>dbj|AB010876.1| Oryza sativa OsGLP1 mRNA for germin-like protein 1, complete cds Length = 994 Score = 248 bits (125), Expect = 1e-62 Identities = 230/265 (86%) Strand = Plus / Plus Query: 66 tctccttcctcatcctgcccttctccgccctggccctgacccaggacttctgcgtggccg 125 ||||||||||| | ||||| ||||| || |||| ||||| ||||| |||||||| |||| Sbjct: 137 tctccttcctcctgctgccattctcgtccatggcgctgacgcaggatttctgcgtcgccg 196 Query: 126 acctggcatgccccgacacgcccgctgggtacccgtgcaagccgggcgtcggcgcgggcg 185 ||||| | ||| ||||||||| || ||||||||||||||| | |||||||||| |||| Sbjct: 197 acctgacctgcagcgacacgccggcggggtacccgtgcaaggccagcgtcggcgccggcg 256 Query: 186 acttctactaccacggcctggccaccgccggcaacaccagcaacctcatcaaggcggccg 245 ||||| |||||||||||| || | || |||||||||||||||||||||||||| |||| Sbjct: 257 acttcgcctaccacggcctcgcggcggcgggcaacaccagcaacctcatcaaggccgccg 316 Query: 246 tcacaccggccttcgtcggccagttccccggcgtgaacgggctcggcatctccgccgcca 305 | || ||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 317 tgacgccggccttcgtcggccagttccccggcgtgaacgggctcggtatctccgcggcga 376 Query: 306 ggctcgacatcgccgtcggcggcgt 330 |||| |||||||||||||| ||||| Sbjct: 377 ggctggacatcgccgtcgggggcgt 401
>gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promoter region and complete cds Length = 2490 Score = 105 bits (53), Expect = 9e-20 Identities = 89/101 (88%) Strand = Plus / Plus Query: 230 ctcatcaaggcggccgtcacaccggccttcgtcggccagttccccggcgtgaacgggctc 289 ||||||||||| ||||| || ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1650 ctcatcaaggccgccgtgaccccggccttcgtgggccagttcccgggcgtcaacgggctt 1709 Query: 290 ggcatctccgccgccaggctcgacatcgccgtcggcggcgt 330 |||||||| || |||||||||||||||| || |||||||| Sbjct: 1710 ggcatctctgcggccaggctcgacatcgaggtgggcggcgt 1750 Score = 93.7 bits (47), Expect = 3e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 66 tctccttcctcatcctgcccttctccgccctggccctgacccaggacttctgcgtggccg 125 ||||||||||| | ||||||| || |||| |||||||| |||||||||||||| |||| Sbjct: 1486 tctccttcctcctgatgcccttggcctccctagccctgacgcaggacttctgcgtcgccg 1545 Query: 126 acctggcatgccccgacacgcccgctgggtacccgtgcaagccgggcgtcggcgcgggcg 185 ||||| | ||| ||||||||| || ||||||||||||||| | ||||| ||| || Sbjct: 1546 acctgacctgcagcgacacgccggcggggtacccgtgcaagtccagcgtcaccgccaacg 1605 Query: 186 acttctactaccacggcctggcc 208 ||||||||| ||||||||||||| Sbjct: 1606 acttctacttccacggcctggcc 1628
>ref|XM_471594.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1299 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 93 ccctggccctgacccaggacttctgcgtggccgacctggcatgccccgacacgcccgctg 152 |||||||||||| ||||||||||||||| | ||||||||| || ||||||||| || | Sbjct: 59 ccctggccctgaaccaggacttctgcgtcggcgacctggcccgcggcgacacgccggccg 118 Query: 153 ggtacccgtgcaagcc 168 | |||||||||||||| Sbjct: 119 gctacccgtgcaagcc 134 Score = 56.0 bits (28), Expect = 7e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 272 cccggcgtgaacgggctcggcatctccgccgc 303 ||||||||||||||||||| |||||||||||| Sbjct: 244 cccggcgtgaacgggctcgacatctccgccgc 275
>emb|AL731615.4|OSJN00256 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065J03, complete sequence Length = 144146 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 93 ccctggccctgacccaggacttctgcgtggccgacctggcatgccccgacacgcccgctg 152 |||||||||||| ||||||||||||||| | ||||||||| || ||||||||| || | Sbjct: 37461 ccctggccctgaaccaggacttctgcgtcggcgacctggcccgcggcgacacgccggccg 37520 Query: 153 ggtacccgtgcaagcc 168 | |||||||||||||| Sbjct: 37521 gctacccgtgcaagcc 37536 Score = 56.0 bits (28), Expect = 7e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 272 cccggcgtgaacgggctcggcatctccgccgc 303 ||||||||||||||||||| |||||||||||| Sbjct: 37847 cccggcgtgaacgggctcgacatctccgccgc 37878
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 93 ccctggccctgacccaggacttctgcgtggccgacctggcatgccccgacacgcccgctg 152 |||||||||||| ||||||||||||||| | ||||||||| || ||||||||| || | Sbjct: 12556764 ccctggccctgaaccaggacttctgcgtcggcgacctggcccgcggcgacacgccggccg 12556705 Query: 153 ggtacccgtgcaagcc 168 | |||||||||||||| Sbjct: 12556704 gctacccgtgcaagcc 12556689 Score = 56.0 bits (28), Expect = 7e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 272 cccggcgtgaacgggctcggcatctccgccgc 303 ||||||||||||||||||| |||||||||||| Sbjct: 12556378 cccggcgtgaacgggctcgacatctccgccgc 12556347
>dbj|D45425.1|PHNPNGLP Pharbitis nil mRNA for Pharbitis nil Germin-like protein precursor, complete cds Length = 962 Score = 56.0 bits (28), Expect = 7e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 213 ccggcaacaccagcaacctcatcaaggcggccgtcacaccggccttcgtcggccagttcc 272 |||||||||||| |||| ||||||| || ||||| || ||||| ||||| || ||||||| Sbjct: 247 ccggcaacaccaccaacatcatcaacgccgccgttactccggcgttcgtgggtcagttcc 306 Query: 273 ccggcgtgaacgggct 288 | || |||| |||||| Sbjct: 307 cgggagtgatcgggct 322
>ref|XM_482785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 660 Score = 48.1 bits (24), Expect = 0.018 Identities = 33/36 (91%) Strand = Plus / Plus Query: 266 cagttccccggcgtgaacgggctcggcatctccgcc 301 |||| ||||| ||||||||| ||||||||||||||| Sbjct: 253 cagtaccccgccgtgaacggcctcggcatctccgcc 288
>ref|NM_001008991.1| Pan troglodytes aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase) (ALDH5A1), mRNA Length = 1638 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 699 gcccttctccgccctggccctg 720
>ref|NM_001080.3| Homo sapiens aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase) (ALDH5A1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA Length = 5131 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 727 gcccttctccgccctggccctg 748
>ref|NM_170740.1| Homo sapiens aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase) (ALDH5A1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA Length = 5170 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 727 gcccttctccgccctggccctg 748
>emb|AJ891037.1| Pan paniscus mRNA for succinic semialdehyde dehydrogenase precursor (ALDH5A1 gene) Length = 1638 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 699 gcccttctccgccctggccctg 720
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 76 catcctgcccttctccgccctg 97 |||||||||||||||||||||| Sbjct: 305050 catcctgcccttctccgccctg 305029
>emb|AL031230.1|HS73M23 Human DNA sequence from clone RP1-73M23 on chromosome 6p22.2-22.3 Contains the 5' part of the GPLD1 gene for glycosylphosphatidylinositol specific phospholipase D1, the SSADH gene for aldehyde dehydrogenase 5 family member A, the 3' part of the KIAA0319 gene and a CpG island, complete sequence Length = 126990 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 48611 gcccttctccgccctggccctg 48632
>emb|Y11192.1|HSNDSSADH Homo sapiens mRNA for succinic semialdehyde dehydrogenase precursor (ALDH5A1 gene) Length = 2531 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 699 gcccttctccgccctggccctg 720
>emb|BX883045.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 4/11 Length = 346406 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 gccctggccctgacccaggact 113 |||||||||||||||||||||| Sbjct: 109100 gccctggccctgacccaggact 109121
>gb|BC034321.1| Homo sapiens aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase), transcript variant 2, mRNA (cDNA clone MGC:41874 IMAGE:4829533), complete cds Length = 1749 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 727 gcccttctccgccctggccctg 748
>emb|AJ884610.1| Cicer arietinum partial mRNA for germin-like protein (glp gene) Length = 797 Score = 44.1 bits (22), Expect = 0.28 Identities = 43/50 (86%) Strand = Plus / Plus Query: 269 ttccccggcgtgaacgggctcggcatctccgccgccaggctcgacatcgc 318 |||||||| || ||||||||||| |||||||| ||| | || |||||||| Sbjct: 161 ttccccggtgtcaacgggctcggaatctccgcagcccgactagacatcgc 210
>emb|AJ427354.2|HSA427354 Homo sapiens partial mRNA for succinic semialdehyde dehydrogenase (ALDH5A1 gene) Length = 2034 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 495 gcccttctccgccctggccctg 516
>emb|AJ427353.1|HSA427353 Homo sapiens partial mRNA for succinate semialdehyde dehydrogenase (ALDH5A1 gene), T538 allele Length = 666 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 495 gcccttctccgccctggccctg 516
>gb|AC011480.3| Homo sapiens chromosome 19 clone CTB-124I16, complete sequence Length = 80878 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 83 cccttctccgccctggccctgacccaggac 112 |||||||| | ||||||||||||||||||| Sbjct: 17719 cccttctctgacctggccctgacccaggac 17748
>emb|AJ621752.1| Pan troglodytes mRNA for succinic semialdehyde dehydrogenase precursor (aldh5a1 gene) Length = 1638 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 699 gcccttctccgccctggccctg 720
>emb|AJ621750.1| Pongo pygmaeus mRNA for succinic semialdehyde dehydrogenase precursor (aldh5a1 gene), isolate subject 6 Length = 1638 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 699 gcccttctccgccctggccctg 720
>emb|AJ621749.1| Pongo pygmaeus mRNA for succinic semialdehyde dehydrogenase precursor (aldh5a1 gene), isolate subject 1 Length = 1638 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 699 gcccttctccgccctggccctg 720
>emb|AJ427355.2|HSA427355 Homo sapiens mRNA for succinic semialdehyde dehydrogenase precursor (ALDH5A1 gene) Length = 5103 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 699 gcccttctccgccctggccctg 720
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 309 tcgacatcgccgtcggcggcgt 330 |||||||||||||||||||||| Sbjct: 707110 tcgacatcgccgtcggcggcgt 707089
>emb|X92753.1|HSSSADHEX H.sapiens SSADH gene (partial) Length = 244 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 217 gcccttctccgccctggccctg 238
>gb|L34820.1|HUMSSADH Human NAD+-dependent succinate-semialdehyde dehydrogenase (SSADH) mRNA, 3' end Length = 1071 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 gcccttctccgccctggccctg 103 |||||||||||||||||||||| Sbjct: 63 gcccttctccgccctggccctg 84
>ref|XM_544424.2| PREDICTED: Canis familiaris similar to iGb3 synthase (LOC487298), mRNA Length = 870 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 ggcgcgggcgacttctactaccacg 200 |||| |||||||||||||||||||| Sbjct: 586 ggcgagggcgacttctactaccacg 610
>emb|X83397.1|SCGLGBI S.coelicolor glgBI gene Length = 2498 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 gccgggcgtcggcgcgggcga 186 ||||||||||||||||||||| Sbjct: 795 gccgggcgtcggcgcgggcga 815
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 gccgggcgtcggcgcgggcga 186 ||||||||||||||||||||| Sbjct: 235268 gccgggcgtcggcgcgggcga 235248
>emb|AJ492381.1|LPE492381 Lolium perenne mRNA for oxalate oxidase 4 (oxO4 gene) Length = 828 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 caggacttctgcgtggccgacctgg 131 |||||||||||||| |||||||||| Sbjct: 85 caggacttctgcgtcgccgacctgg 109
>emb|AJ492380.1|LPE492380 Lolium perenne mRNA for oxalate oxidase 2 (oxO2 gene) Length = 867 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 caggacttctgcgtggccgacctgg 131 |||||||||||||| |||||||||| Sbjct: 85 caggacttctgcgtcgccgacctgg 109
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 cgccctggccctgacccagga 111 ||||||||||||||||||||| Sbjct: 2465840 cgccctggccctgacccagga 2465820
>gb|AE005746.1| Caulobacter crescentus CB15 section 72 of 359 of the complete genome Length = 10948 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 166 gccgggcgtcggcgcgggcgacttc 190 ||||||||||||||| ||||||||| Sbjct: 6400 gccgggcgtcggcgccggcgacttc 6424
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 162 gcaagccgggcgtcggcgcgggcgacttc 190 |||||||||||| ||| |||||||||||| Sbjct: 2802669 gcaagccgggcggcggggcgggcgacttc 2802697
>gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O22 map 3p, complete sequence Length = 211012 Score = 42.1 bits (21), Expect = 1.1 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 71 ttcctcatcctgccct-tctccgccctggccctgacccagg 110 |||| |||||||||| |||||||||||||||||| ||||| Sbjct: 14911 ttccccatcctgcccgctctccgccctggccctgagccagg 14871
>gb|AC090956.1|AC090956 Homo sapiens chromosome 3 clone RP11-659G4 map 3p, complete sequence Length = 202844 Score = 42.1 bits (21), Expect = 1.1 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 71 ttcctcatcctgccct-tctccgccctggccctgacccagg 110 |||| |||||||||| |||||||||||||||||| ||||| Sbjct: 169482 ttccccatcctgcccgctctccgccctggccctgagccagg 169442
>gb|AC026218.5|AC026218 Homo sapiens chromosome 3 clone RP11-813N23 map 3p, complete sequence Length = 198597 Score = 42.1 bits (21), Expect = 1.1 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 71 ttcctcatcctgccct-tctccgccctggccctgacccagg 110 |||| |||||||||| |||||||||||||||||| ||||| Sbjct: 182523 ttccccatcctgcccgctctccgccctggccctgagccagg 182483
>gb|AC018505.4|AC018505 Homo sapiens chromosome 3 clone RP11-58I13 map 3p, complete sequence Length = 196044 Score = 42.1 bits (21), Expect = 1.1 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 71 ttcctcatcctgccct-tctccgccctggccctgacccagg 110 |||| |||||||||| |||||||||||||||||| ||||| Sbjct: 67929 ttccccatcctgcccgctctccgccctggccctgagccagg 67889
>gb|AC018831.4|AC018831 Homo sapiens chromosome 3 clone RP11-481B18 map 3p, complete sequence Length = 178548 Score = 42.1 bits (21), Expect = 1.1 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 71 ttcctcatcctgccct-tctccgccctggccctgacccagg 110 |||| |||||||||| |||||||||||||||||| ||||| Sbjct: 96314 ttccccatcctgcccgctctccgccctggccctgagccagg 96274
>gb|AC011599.8|AC011599 Homo sapiens 3 BAC RP11-606C6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 209876 Score = 42.1 bits (21), Expect = 1.1 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 71 ttcctcatcctgccct-tctccgccctggccctgacccagg 110 |||| |||||||||| |||||||||||||||||| ||||| Sbjct: 141955 ttccccatcctgcccgctctccgccctggccctgagccagg 141995
>gb|AC069271.5| Homo sapiens chromosome 3 clone RP11-715I4 map 3p, complete sequence Length = 229408 Score = 42.1 bits (21), Expect = 1.1 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 71 ttcctcatcctgccct-tctccgccctggccctgacccagg 110 |||| |||||||||| |||||||||||||||||| ||||| Sbjct: 148633 ttccccatcctgcccgctctccgccctggccctgagccagg 148593
>ref|NM_191639.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 675 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 caggacttctgcgtggccgacctg 130 |||||| ||||||||||||||||| Sbjct: 103 caggacatctgcgtggccgacctg 126
>ref|XM_469352.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 ccaggacttctgcgtggccgacct 129 ||||||||||||||| |||||||| Sbjct: 238 ccaggacttctgcgtcgccgacct 261
>ref|XM_469350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 ccaggacttctgcgtggccgacct 129 ||||||||||||||| |||||||| Sbjct: 102 ccaggacttctgcgtcgccgacct 125
>ref|XM_476795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1548 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 cccgtgcaagccgggcgtcggcgc 180 |||||||||||||||| ||||||| Sbjct: 1348 cccgtgcaagccgggcctcggcgc 1325
>gb|AC131586.10| Mus musculus chromosome 14, clone RP24-226L18, complete sequence Length = 171023 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gcatctccgccgccaggctc 310 |||||||||||||||||||| Sbjct: 84803 gcatctccgccgccaggctc 84822
>ref|XM_870000.1| PREDICTED: Bos taurus similar to iGb3 synthase (LOC617693), mRNA Length = 909 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 gggcgacttctactaccacg 200 |||||||||||||||||||| Sbjct: 753 gggcgacttctactaccacg 772
>ref|NM_178873.2| Mus musculus aarF domain containing kinase 2 (Adck2), mRNA Length = 3540 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ggctcggcatctccgccgcc 304 |||||||||||||||||||| Sbjct: 92 ggctcggcatctccgccgcc 111
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 ccaggacttctgcgtggccgacct 129 ||||||||||||||| |||||||| Sbjct: 27500440 ccaggacttctgcgtcgccgacct 27500417 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 ccaggacttctgcgtggccgacct 129 ||||||||||||||| |||||||| Sbjct: 27493120 ccaggacttctgcgtcgccgacct 27493097
>gb|AC122345.4| Mus musculus BAC clone RP23-366P9 from chromosome 6, complete sequence Length = 199923 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ggctcggcatctccgccgcc 304 |||||||||||||||||||| Sbjct: 163696 ggctcggcatctccgccgcc 163715
>emb|AL645817.1| Human DNA sequence from clone RP1-2A2 on chromosome Xq21, complete sequence Length = 129249 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 tctccttcctcatcctgcccttct 89 ||||||||||| |||||||||||| Sbjct: 59426 tctccttcctcctcctgcccttct 59449
>emb|AL500524.10| Human DNA sequence from clone RP11-346K2 on chromosome 6 Contains part of a novel gene, complete sequence Length = 40545 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atacccaacattcagcagag 20 |||||||||||||||||||| Sbjct: 37386 atacccaacattcagcagag 37405
>emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genome; segment 16/16 Length = 227214 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ggctcgacatcgccgtcggc 325 |||||||||||||||||||| Sbjct: 205502 ggctcgacatcgccgtcggc 205483
>gb|AE012116.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 24 of 460 of the complete genome Length = 13074 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cggcctggccaccgccggca 218 |||||||||||||||||||| Sbjct: 5517 cggcctggccaccgccggca 5536
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 ctgcccttctccgccctggccctg 103 |||||| ||||||||||||||||| Sbjct: 2136538 ctgcccgtctccgccctggccctg 2136515
>dbj|AK161225.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833428D17 product:aarF domain containing kinase 2, full insert sequence Length = 2541 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ggctcggcatctccgccgcc 304 |||||||||||||||||||| Sbjct: 94 ggctcggcatctccgccgcc 113
>dbj|AK013359.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810457G06 product:unclassifiable, full insert sequence Length = 1259 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gcatctccgccgccaggctc 310 |||||||||||||||||||| Sbjct: 1174 gcatctccgccgccaggctc 1193
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cggcctggccaccgccggca 218 |||||||||||||||||||| Sbjct: 259778 cggcctggccaccgccggca 259797
>dbj|AK028568.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732401K03 product:aarF domain containing kinase 2, full insert sequence Length = 3540 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ggctcggcatctccgccgcc 304 |||||||||||||||||||| Sbjct: 92 ggctcggcatctccgccgcc 111
>dbj|AK028557.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632433A20 product:aarF domain containing kinase 2, full insert sequence Length = 2512 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ggctcggcatctccgccgcc 304 |||||||||||||||||||| Sbjct: 95 ggctcggcatctccgccgcc 114
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 cccgtgcaagccgggcgtcggcgc 180 |||||||||||||||| ||||||| Sbjct: 3937845 cccgtgcaagccgggcctcggcgc 3937868
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 ccaggacttctgcgtggccgacct 129 ||||||||||||||| |||||||| Sbjct: 27591763 ccaggacttctgcgtcgccgacct 27591740 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 ccaggacttctgcgtggccgacct 129 ||||||||||||||| |||||||| Sbjct: 27584443 ccaggacttctgcgtcgccgacct 27584420
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 caggacttctgcgtggccgacctg 130 |||||| ||||||||||||||||| Sbjct: 29225259 caggacatctgcgtggccgacctg 29225282
>gb|AF323753.1|AF323753 Streptomyces nogalater nogalamycin biosynthetic gene cluster, complete sequence Length = 12637 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ccgggcgtcggcgcgggcga 186 |||||||||||||||||||| Sbjct: 2346 ccgggcgtcggcgcgggcga 2365
>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete sequence Length = 96742 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 cggcgtgaacgggctcggca 293 |||||||||||||||||||| Sbjct: 70720 cggcgtgaacgggctcggca 70701
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 tcgtcggccagttccccggc 277 |||||||||||||||||||| Sbjct: 6983636 tcgtcggccagttccccggc 6983655 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ctccgccctggccctgaccc 107 |||||||||||||||||||| Sbjct: 4980317 ctccgccctggccctgaccc 4980298 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccgccgccaggctcgacatc 316 |||||||||||||||||||| Sbjct: 4049709 ccgccgccaggctcgacatc 4049728
>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome Length = 351911 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cgacatcgccgtcggcggcg 329 |||||||||||||||||||| Sbjct: 109813 cgacatcgccgtcggcggcg 109794
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 ccaggacttctgcgtggccgacct 129 ||||||||||||||| |||||||| Sbjct: 57394 ccaggacttctgcgtcgccgacct 57417 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 ccaggacttctgcgtggccgacct 129 ||||||||||||||| |||||||| Sbjct: 50074 ccaggacttctgcgtcgccgacct 50097
>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0692C11 Length = 169562 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 caggacttctgcgtggccgacctg 130 |||||| ||||||||||||||||| Sbjct: 4122 caggacatctgcgtggccgacctg 4145
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 caggacttctgcgtggccgacctg 130 |||||| ||||||||||||||||| Sbjct: 71046 caggacatctgcgtggccgacctg 71069
>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496D04 Length = 197358 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 cccgtgcaagccgggcgtcggcgc 180 |||||||||||||||| ||||||| Sbjct: 176957 cccgtgcaagccgggcctcggcgc 176980
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gctcgacatcgccgtcggcg 326 |||||||||||||||||||| Sbjct: 6869201 gctcgacatcgccgtcggcg 6869220
>dbj|AP003843.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1656_E11 Length = 116211 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 cccgtgcaagccgggcgtcggcgc 180 |||||||||||||||| ||||||| Sbjct: 40571 cccgtgcaagccgggcctcggcgc 40594
>emb|Z84816.1|HS2A2B Human DNA sequence from PAC 2A2 on chromosome X contains ESTs Length = 96355 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 tctccttcctcatcctgcccttct 89 ||||||||||| |||||||||||| Sbjct: 36930 tctccttcctcctcctgcccttct 36907
>dbj|AK059872.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F02, full insert sequence Length = 1028 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 ccaggacttctgcgtggccgacct 129 ||||||||||||||| |||||||| Sbjct: 249 ccaggacttctgcgtcgccgacct 272
>dbj|AP006333.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7_A, complete sequence Length = 118828 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 ctaccacggcctggccaccgccgg 216 ||||| |||||||||||||||||| Sbjct: 106726 ctaccgcggcctggccaccgccgg 106703
>dbj|AP005668.2| Homo sapiens genomic DNA, chromosome 11 clone:CMF9-412N3, complete sequence Length = 39955 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 ctaccacggcctggccaccgccgg 216 ||||| |||||||||||||||||| Sbjct: 1666 ctaccgcggcctggccaccgccgg 1643
>dbj|AP003554.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7, complete sequence Length = 150474 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 ctaccacggcctggccaccgccgg 216 ||||| |||||||||||||||||| Sbjct: 106726 ctaccgcggcctggccaccgccgg 106703
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cgtcggcgcgggcgacttct 191 |||||||||||||||||||| Sbjct: 758254 cgtcggcgcgggcgacttct 758273
>emb|AL663027.9| Mouse DNA sequence from clone RP23-16P3 on chromosome 2, complete sequence Length = 219778 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 50 ttgctccctgtgcttatctccttcctca 77 |||||||||||| || |||||||||||| Sbjct: 139769 ttgctccctgtggttttctccttcctca 139796 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,304,065 Number of Sequences: 3902068 Number of extensions: 2304065 Number of successful extensions: 58913 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57265 Number of HSP's gapped (non-prelim): 1647 length of query: 336 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 314 effective length of database: 17,147,199,772 effective search space: 5384220728408 effective search space used: 5384220728408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)